0.013200
0.007621
0.000000
0.000000
0.015242
0.000000
0.000000
0.000000
0.023923
0.00000
0.00000
0.00000
Kumarevel, T.S.
Tanaka, T.
Shinkai, A.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
75.760
75.760
41.800
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
N
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
US
Proteins
PSFGEY
0867
1097-0134
10.1002/prot.22541
19701940
Crystal structure of the manganese transport regulatory protein from Escherichia coli.
2009
UK
Nature
NATUAS
0006
0028-0836
394
502
506
10.1038/28893
9697776
Structure of the metal-ion-activated diphtheria toxin repressor/tox operator complex
1998
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
10
652
657
10.1038/nsb951
12847518
Structure of the manganese-bound manganese transport regulator of Bacillus subtilis
2003
10.2210/pdb2h09/pdb
pdb_00002h09
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298.0
1
1
Silicon II channel
CCD
2006-03-30
ADSC QUANTUM 4
CCD
2006-03-10
ADSC QUANTUM 4
Silicon II channel
SINGLE WAVELENGTH
M
x-ray
1
MAD
M
x-ray
1
1.0000
1.0
0.9789
1.0
0.9793
1.0
0.9640
1.0
BL26B1
SPring-8
1.0000
SYNCHROTRON
SPRING-8 BEAMLINE BL26B1
BL26B1
SPring-8
0.9789, 0.9793, 0.9640
SYNCHROTRON
SPRING-8 BEAMLINE BL26B1
17669.283
Transcriptional regulator mntR
1
nat
polymer
18.015
water
78
nat
water
Manganese transport regulator, diphtheria toxin repressor
no
no
MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLAT
MGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK
MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLAT
MGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK
A
eco002000801.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
sample
562
Escherichia coli
2
1.96
37.22
VAPOR DIFFUSION, HANGING DROP
4.2
PEG 300, Phosphate citrate, pH 4.2, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
RIKEN Structural Genomics/Proteomics Initiative
RSGI
NPPSFA, National Project on Protein Structural and Functional Analyses
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
2007-05-15
1
1
2008-05-01
1
2
2011-07-13
1
3
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Y
RCSB
Y
PDBJ
2006-05-14
REL
REL
HOH
water
HOH
1
2
HOH
HOH
156
A
HOH
2
2
HOH
HOH
157
A
HOH
3
2
HOH
HOH
158
A
HOH
4
2
HOH
HOH
159
A
HOH
5
2
HOH
HOH
160
A
HOH
6
2
HOH
HOH
161
A
HOH
7
2
HOH
HOH
162
A
HOH
8
2
HOH
HOH
163
A
HOH
9
2
HOH
HOH
164
A
HOH
10
2
HOH
HOH
165
A
HOH
11
2
HOH
HOH
166
A
HOH
12
2
HOH
HOH
167
A
HOH
13
2
HOH
HOH
168
A
HOH
14
2
HOH
HOH
169
A
HOH
15
2
HOH
HOH
170
A
HOH
16
2
HOH
HOH
171
A
HOH
17
2
HOH
HOH
172
A
HOH
18
2
HOH
HOH
173
A
HOH
19
2
HOH
HOH
174
A
HOH
20
2
HOH
HOH
175
A
HOH
21
2
HOH
HOH
176
A
HOH
22
2
HOH
HOH
177
A
HOH
23
2
HOH
HOH
178
A
HOH
24
2
HOH
HOH
179
A
HOH
25
2
HOH
HOH
180
A
HOH
26
2
HOH
HOH
181
A
HOH
27
2
HOH
HOH
182
A
HOH
28
2
HOH
HOH
183
A
HOH
29
2
HOH
HOH
184
A
HOH
30
2
HOH
HOH
185
A
HOH
31
2
HOH
HOH
186
A
HOH
32
2
HOH
HOH
187
A
HOH
33
2
HOH
HOH
188
A
HOH
34
2
HOH
HOH
189
A
HOH
35
2
HOH
HOH
190
A
HOH
36
2
HOH
HOH
191
A
HOH
37
2
HOH
HOH
192
A
HOH
38
2
HOH
HOH
193
A
HOH
39
2
HOH
HOH
194
A
HOH
40
2
HOH
HOH
195
A
HOH
41
2
HOH
HOH
196
A
HOH
42
2
HOH
HOH
197
A
HOH
43
2
HOH
HOH
198
A
HOH
44
2
HOH
HOH
199
A
HOH
45
2
HOH
HOH
200
A
HOH
46
2
HOH
HOH
201
A
HOH
47
2
HOH
HOH
202
A
HOH
48
2
HOH
HOH
203
A
HOH
49
2
HOH
HOH
204
A
HOH
50
2
HOH
HOH
205
A
HOH
51
2
HOH
HOH
206
A
HOH
52
2
HOH
HOH
207
A
HOH
53
2
HOH
HOH
208
A
HOH
54
2
HOH
HOH
209
A
HOH
55
2
HOH
HOH
210
A
HOH
56
2
HOH
HOH
211
A
HOH
57
2
HOH
HOH
212
A
HOH
58
2
HOH
HOH
213
A
HOH
59
2
HOH
HOH
214
A
HOH
60
2
HOH
HOH
215
A
HOH
61
2
HOH
HOH
216
A
HOH
62
2
HOH
HOH
217
A
HOH
63
2
HOH
HOH
218
A
HOH
64
2
HOH
HOH
219
A
HOH
65
2
HOH
HOH
220
A
HOH
66
2
HOH
HOH
221
A
HOH
67
2
HOH
HOH
222
A
HOH
68
2
HOH
HOH
223
A
HOH
69
2
HOH
HOH
224
A
HOH
70
2
HOH
HOH
225
A
HOH
71
2
HOH
HOH
226
A
HOH
72
2
HOH
HOH
227
A
HOH
73
2
HOH
HOH
228
A
HOH
74
2
HOH
HOH
229
A
HOH
75
2
HOH
HOH
230
A
HOH
76
2
HOH
HOH
231
A
HOH
77
2
HOH
HOH
232
A
HOH
78
2
HOH
HOH
233
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
n
13
13
A
n
14
14
A
n
15
15
A
n
16
16
A
n
17
17
A
n
18
18
A
n
19
19
A
n
20
20
A
n
21
21
A
n
22
22
A
n
23
23
A
GLU
24
n
24
GLU
24
A
GLY
25
n
25
GLY
25
A
PHE
26
n
26
PHE
26
A
ARG
27
n
27
ARG
27
A
GLN
28
n
28
GLN
28
A
VAL
29
n
29
VAL
29
A
ARG
30
n
30
ARG
30
A
GLU
31
n
31
GLU
31
A
ALA
32
n
32
ALA
32
A
HIS
33
n
33
HIS
33
A
ARG
34
n
34
ARG
34
A
ARG
35
n
35
ARG
35
A
GLU
36
n
36
GLU
36
A
LEU
37
n
37
LEU
37
A
ILE
38
n
38
ILE
38
A
ASP
39
n
39
ASP
39
A
ASP
40
n
40
ASP
40
A
TYR
41
n
41
TYR
41
A
VAL
42
n
42
VAL
42
A
GLU
43
n
43
GLU
43
A
LEU
44
n
44
LEU
44
A
ILE
45
n
45
ILE
45
A
SER
46
n
46
SER
46
A
ASP
47
n
47
ASP
47
A
LEU
48
n
48
LEU
48
A
ILE
49
n
49
ILE
49
A
ARG
50
n
50
ARG
50
A
GLU
51
n
51
GLU
51
A
VAL
52
n
52
VAL
52
A
GLY
53
n
53
GLY
53
A
GLU
54
n
54
GLU
54
A
ALA
55
n
55
ALA
55
A
ARG
56
n
56
ARG
56
A
GLN
57
n
57
GLN
57
A
VAL
58
n
58
VAL
58
A
ASP
59
n
59
ASP
59
A
MET
60
n
60
MET
60
A
ALA
61
n
61
ALA
61
A
ALA
62
n
62
ALA
62
A
ARG
63
n
63
ARG
63
A
LEU
64
n
64
LEU
64
A
GLY
65
n
65
GLY
65
A
VAL
66
n
66
VAL
66
A
SER
67
n
67
SER
67
A
GLN
68
n
68
GLN
68
A
PRO
69
n
69
PRO
69
A
THR
70
n
70
THR
70
A
VAL
71
n
71
VAL
71
A
ALA
72
n
72
ALA
72
A
LYS
73
n
73
LYS
73
A
MET
74
n
74
MET
74
A
LEU
75
n
75
LEU
75
A
LYS
76
n
76
LYS
76
A
ARG
77
n
77
ARG
77
A
LEU
78
n
78
LEU
78
A
ALA
79
n
79
ALA
79
A
THR
80
n
80
THR
80
A
MET
81
n
81
MET
81
A
GLY
82
n
82
GLY
82
A
LEU
83
n
83
LEU
83
A
ILE
84
n
84
ILE
84
A
GLU
85
n
85
GLU
85
A
MET
86
n
86
MET
86
A
ILE
87
n
87
ILE
87
A
PRO
88
n
88
PRO
88
A
TRP
89
n
89
TRP
89
A
ARG
90
n
90
ARG
90
A
GLY
91
n
91
GLY
91
A
VAL
92
n
92
VAL
92
A
PHE
93
n
93
PHE
93
A
LEU
94
n
94
LEU
94
A
THR
95
n
95
THR
95
A
ALA
96
n
96
ALA
96
A
GLU
97
n
97
GLU
97
A
GLY
98
n
98
GLY
98
A
GLU
99
n
99
GLU
99
A
LYS
100
n
100
LYS
100
A
LEU
101
n
101
LEU
101
A
ALA
102
n
102
ALA
102
A
GLN
103
n
103
GLN
103
A
GLU
104
n
104
GLU
104
A
SER
105
n
105
SER
105
A
ARG
106
n
106
ARG
106
A
GLU
107
n
107
GLU
107
A
ARG
108
n
108
ARG
108
A
HIS
109
n
109
HIS
109
A
GLN
110
n
110
GLN
110
A
ILE
111
n
111
ILE
111
A
VAL
112
n
112
VAL
112
A
GLU
113
n
113
GLU
113
A
ASN
114
n
114
ASN
114
A
PHE
115
n
115
PHE
115
A
LEU
116
n
116
LEU
116
A
LEU
117
n
117
LEU
117
A
VAL
118
n
118
VAL
118
A
LEU
119
n
119
LEU
119
A
GLY
120
n
120
GLY
120
A
VAL
121
n
121
VAL
121
A
SER
122
n
122
SER
122
A
PRO
123
n
123
PRO
123
A
GLU
124
n
124
GLU
124
A
ILE
125
n
125
ILE
125
A
ALA
126
n
126
ALA
126
A
ARG
127
n
127
ARG
127
A
ARG
128
n
128
ARG
128
A
ASP
129
n
129
ASP
129
A
ALA
130
n
130
ALA
130
A
GLU
131
n
131
GLU
131
A
GLY
132
n
132
GLY
132
A
MET
133
n
133
MET
133
A
GLU
134
n
134
GLU
134
A
HIS
135
n
135
HIS
135
A
HIS
136
n
136
HIS
136
A
VAL
137
n
137
VAL
137
A
SER
138
n
138
SER
138
A
GLU
139
n
139
GLU
139
A
GLU
140
n
140
GLU
140
A
THR
141
n
141
THR
141
A
LEU
142
n
142
LEU
142
A
ASP
143
n
143
ASP
143
A
ALA
144
n
144
ALA
144
A
PHE
145
n
145
PHE
145
A
ARG
146
n
146
ARG
146
A
LEU
147
n
147
LEU
147
A
PHE
148
n
148
PHE
148
A
THR
149
n
149
THR
149
A
GLN
150
n
150
GLN
150
A
n
151
151
A
n
152
152
A
n
153
153
A
n
154
154
A
n
155
155
A
author_and_software_defined_assembly
PISA
2
dimeric
2040
-15
15010
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
5_675
x-y+1,-y+2,-z+1/3
crystal symmetry operation
0.0000000000
131.2201691814
13.9333333333
A
N
ILE
87
A
N
ILE
87
A
O
GLY
91
A
O
GLY
91
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
ARG
3
A
ARG
3
1
Y
1
A
ARG
4
A
ARG
4
1
Y
1
A
ALA
5
A
ALA
5
1
Y
1
A
GLY
6
A
GLY
6
1
Y
1
A
THR
7
A
THR
7
1
Y
1
A
PRO
8
A
PRO
8
1
Y
1
A
THR
9
A
THR
9
1
Y
1
A
ALA
10
A
ALA
10
1
Y
1
A
LYS
11
A
LYS
11
1
Y
1
A
LYS
12
A
LYS
12
1
Y
1
A
VAL
13
A
VAL
13
1
Y
1
A
THR
14
A
THR
14
1
Y
1
A
GLN
15
A
GLN
15
1
Y
1
A
LEU
16
A
LEU
16
1
Y
1
A
VAL
17
A
VAL
17
1
Y
1
A
ASN
18
A
ASN
18
1
Y
1
A
VAL
19
A
VAL
19
1
Y
1
A
GLU
20
A
GLU
20
1
Y
1
A
GLU
21
A
GLU
21
1
Y
1
A
HIS
22
A
HIS
22
1
Y
1
A
VAL
23
A
VAL
23
1
Y
1
A
LYS
151
A
LYS
151
1
Y
1
A
HIS
152
A
HIS
152
1
Y
1
A
GLY
153
A
GLY
153
1
Y
1
A
ALA
154
A
ALA
154
1
Y
1
A
LYS
155
A
LYS
155
1
Y
1
A
A
O
O
HOH
HOH
181
181
1.86
1_555
5_676
1
A
PHE
148
-53.76
103.89
protein_rep.param
protein.top
water_rep.param
water.top
dna-rna_rep.param
dna-rna_rep.param
ion.param
ion.param
49.6
9.39
5.48
0.00
9.39
0.00
-18.78
0.258
0.010
0.238
0.238
2.10
19.92
678
8314
8265
8.2
99.5
RANDOM
1070426.67
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MAD
Engh & Huber
FLAT MODEL
59.5454
0.347004
0.32
0.28
5.00
0.27
0.29
2.10
19.92
78
1101
0
0
1023
0.007
1.1
21.8
0.73
1.52
1.50
2.38
2.00
2.99
2.00
4.34
2.50
0.321
0.032
0.312
2.23
103
1213
6
7.8
97.0
25.9
2.10
50.0
2H09
8314
8314
1
1
0.0062
1,2
9.5
99.4
0.329
2.10
2.18
782
5.8
95.7
refinement
CNS
1.1
data collection
ADSC
data scaling
CCP4
(SCALA)
phasing
SOLVE
Crystal structure of diphtheria toxin repressor like protein from E. coli
1
N
N
2
N
N
A
PHE
26
A
PHE
26
HELX_P
A
GLY
53
A
GLY
53
1
1
28
A
ARG
56
A
ARG
56
HELX_P
A
GLY
65
A
GLY
65
1
2
10
A
SER
67
A
SER
67
HELX_P
A
MET
81
A
MET
81
1
3
15
A
THR
95
A
THR
95
HELX_P
A
GLY
120
A
GLY
120
1
4
26
A
SER
122
A
SER
122
HELX_P
A
GLU
134
A
GLU
134
1
5
13
A
HIS
135
A
HIS
135
HELX_P
A
VAL
137
A
VAL
137
5
6
3
A
SER
138
A
SER
138
HELX_P
A
PHE
148
A
PHE
148
1
7
11
TRANSCRIPTION
Transcription regulator, diphtheria toxin, manganese transport, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSCRIPTION
MNTR_ECOLI
UNP
1
1
P0A9F1
MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVELISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLAT
MGLIEMIPWRGVFLTAEGEKLAQESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGAK
1
155
2H09
1
155
P0A9F1
A
1
1
155
2
anti-parallel
A
ILE
84
A
ILE
84
A
ILE
87
A
ILE
87
A
GLY
91
A
GLY
91
A
LEU
94
A
LEU
94
154
P 32 2 1