0.00969
0.00560
0.00000
0.00000
0.01119
0.00000
0.00000
0.00000
0.02390
0.00000
0.00000
0.00000
Gavira, J.A.
Godoy-Ruiz, R.
Ibarra-Molero, B.
Sanchez-Ruiz, J.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120
103.170
103.170
41.834
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
C
N
251
N
C
N
252
N
O
N
253
N
C
N
254
N
C
N
255
S
C
N
256
N
O
N
257
N
C
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
C
N
283
N
O
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
N
300
N
C
N
301
N
C
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
N
317
N
O
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
R
C
N
331
N
O
N
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
N
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
N
381
N
O
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
N
N
395
S
C
N
396
N
C
N
397
N
O
N
398
N
C
N
399
N
C
N
400
N
C
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
Y
269
N
doub
Y
270
N
sing
Y
271
N
sing
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
doub
Y
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
Y
366
N
doub
Y
367
N
sing
Y
368
N
sing
N
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
To be Published
0353
Crystal Structure of Thioredoxin Mutant
D10E in Hexagonal (p61) Space Group
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
336
313
318
Relation between protein stability, evolution and structure, as probed by carboxylic acid mutations.
2004
10.2210/pdb2h76/pdb
pdb_00002h76
100
1
Montel Optics
CCD
2006-02-20
BRUKER SMART 6000
Ni filter
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
OTHER
11701.413
Thioredoxin
D10E
2
man
polymer
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
2
syn
non-polymer
18.015
water
99
nat
water
no
no
SDKIIHLTDESFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL
FKNGEVAATKVGALSKGQLKEFLDANLA
SDKIIHLTDESFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL
FKNGEVAATKVGALSKGQLKEFLDANLA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
trxA
562
Escherichia coli
562
Escherichia coli
JF521
plasmid
pTK100
1
2.64
53.52
COUNTER-DIFFUSION
3.5
60% (v/v) MPD, HEPES 15 mM pH 4.1, Ac2Cu 1mM, AcNa 15m, pH 3.5, Counter-diffusion, temperature 277K
277
software
database_2
exptl_crystal_grow
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Advisory
Version format compliance
Structure summary
Refinement description
Database references
Derived calculations
Experimental preparation
Data collection
Refinement description
1
0
2007-05-15
1
1
2008-05-01
1
2
2011-07-13
1
3
2012-05-02
1
4
2017-10-18
1
5
2021-10-20
1
6
2023-08-30
_software.classification
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_exptl_crystal_grow.method
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2006-06-01
REL
REL
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL
HOH
water
2TRX
pdb entry 2TRX
PDB
experimental model
MPD
501
2
MPD
MPD
501
A
MPD
502
2
MPD
MPD
502
A
HOH
1
3
HOH
HOH
503
A
HOH
4
3
HOH
HOH
504
A
HOH
5
3
HOH
HOH
505
A
HOH
6
3
HOH
HOH
506
A
HOH
7
3
HOH
HOH
507
A
HOH
8
3
HOH
HOH
508
A
HOH
11
3
HOH
HOH
509
A
HOH
12
3
HOH
HOH
510
A
HOH
13
3
HOH
HOH
511
A
HOH
14
3
HOH
HOH
512
A
HOH
15
3
HOH
HOH
513
A
HOH
16
3
HOH
HOH
514
A
HOH
18
3
HOH
HOH
515
A
HOH
19
3
HOH
HOH
516
A
HOH
20
3
HOH
HOH
517
A
HOH
21
3
HOH
HOH
518
A
HOH
23
3
HOH
HOH
519
A
HOH
24
3
HOH
HOH
520
A
HOH
25
3
HOH
HOH
521
A
HOH
26
3
HOH
HOH
522
A
HOH
29
3
HOH
HOH
523
A
HOH
30
3
HOH
HOH
524
A
HOH
31
3
HOH
HOH
525
A
HOH
33
3
HOH
HOH
526
A
HOH
34
3
HOH
HOH
527
A
HOH
36
3
HOH
HOH
528
A
HOH
37
3
HOH
HOH
529
A
HOH
38
3
HOH
HOH
530
A
HOH
39
3
HOH
HOH
531
A
HOH
40
3
HOH
HOH
532
A
HOH
42
3
HOH
HOH
533
A
HOH
43
3
HOH
HOH
534
A
HOH
44
3
HOH
HOH
535
A
HOH
46
3
HOH
HOH
536
A
HOH
48
3
HOH
HOH
537
A
HOH
51
3
HOH
HOH
538
A
HOH
52
3
HOH
HOH
539
A
HOH
54
3
HOH
HOH
540
A
HOH
55
3
HOH
HOH
541
A
HOH
58
3
HOH
HOH
542
A
HOH
60
3
HOH
HOH
543
A
HOH
64
3
HOH
HOH
544
A
HOH
66
3
HOH
HOH
545
A
HOH
67
3
HOH
HOH
546
A
HOH
68
3
HOH
HOH
547
A
HOH
70
3
HOH
HOH
548
A
HOH
71
3
HOH
HOH
549
A
HOH
73
3
HOH
HOH
550
A
HOH
76
3
HOH
HOH
551
A
HOH
78
3
HOH
HOH
552
A
HOH
79
3
HOH
HOH
553
A
HOH
83
3
HOH
HOH
554
A
HOH
85
3
HOH
HOH
555
A
HOH
87
3
HOH
HOH
556
A
HOH
88
3
HOH
HOH
557
A
HOH
89
3
HOH
HOH
558
A
HOH
93
3
HOH
HOH
559
A
HOH
96
3
HOH
HOH
560
A
HOH
97
3
HOH
HOH
561
A
HOH
98
3
HOH
HOH
562
A
HOH
100
3
HOH
HOH
563
A
HOH
102
3
HOH
HOH
564
A
HOH
2
3
HOH
HOH
109
B
HOH
3
3
HOH
HOH
110
B
HOH
9
3
HOH
HOH
111
B
HOH
10
3
HOH
HOH
112
B
HOH
17
3
HOH
HOH
113
B
HOH
22
3
HOH
HOH
114
B
HOH
27
3
HOH
HOH
115
B
HOH
28
3
HOH
HOH
116
B
HOH
32
3
HOH
HOH
117
B
HOH
35
3
HOH
HOH
118
B
HOH
41
3
HOH
HOH
119
B
HOH
45
3
HOH
HOH
120
B
HOH
47
3
HOH
HOH
121
B
HOH
49
3
HOH
HOH
122
B
HOH
50
3
HOH
HOH
123
B
HOH
53
3
HOH
HOH
124
B
HOH
56
3
HOH
HOH
125
B
HOH
57
3
HOH
HOH
126
B
HOH
59
3
HOH
HOH
127
B
HOH
61
3
HOH
HOH
128
B
HOH
63
3
HOH
HOH
129
B
HOH
65
3
HOH
HOH
130
B
HOH
69
3
HOH
HOH
131
B
HOH
72
3
HOH
HOH
132
B
HOH
74
3
HOH
HOH
133
B
HOH
75
3
HOH
HOH
134
B
HOH
77
3
HOH
HOH
135
B
HOH
80
3
HOH
HOH
136
B
HOH
81
3
HOH
HOH
137
B
HOH
82
3
HOH
HOH
138
B
HOH
84
3
HOH
HOH
139
B
HOH
86
3
HOH
HOH
140
B
HOH
92
3
HOH
HOH
141
B
HOH
94
3
HOH
HOH
142
B
HOH
95
3
HOH
HOH
143
B
HOH
99
3
HOH
HOH
144
B
HOH
101
3
HOH
HOH
145
B
SER
1
n
1
SER
1
A
ASP
2
n
2
ASP
2
A
LYS
3
n
3
LYS
3
A
ILE
4
n
4
ILE
4
A
ILE
5
n
5
ILE
5
A
HIS
6
n
6
HIS
6
A
LEU
7
n
7
LEU
7
A
THR
8
n
8
THR
8
A
ASP
9
n
9
ASP
9
A
GLU
10
n
10
GLU
10
A
SER
11
n
11
SER
11
A
PHE
12
n
12
PHE
12
A
ASP
13
n
13
ASP
13
A
THR
14
n
14
THR
14
A
ASP
15
n
15
ASP
15
A
VAL
16
n
16
VAL
16
A
LEU
17
n
17
LEU
17
A
LYS
18
n
18
LYS
18
A
ALA
19
n
19
ALA
19
A
ASP
20
n
20
ASP
20
A
GLY
21
n
21
GLY
21
A
ALA
22
n
22
ALA
22
A
ILE
23
n
23
ILE
23
A
LEU
24
n
24
LEU
24
A
VAL
25
n
25
VAL
25
A
ASP
26
n
26
ASP
26
A
PHE
27
n
27
PHE
27
A
TRP
28
n
28
TRP
28
A
ALA
29
n
29
ALA
29
A
GLU
30
n
30
GLU
30
A
TRP
31
n
31
TRP
31
A
CYS
32
n
32
CYS
32
A
GLY
33
n
33
GLY
33
A
PRO
34
n
34
PRO
34
A
CYS
35
n
35
CYS
35
A
LYS
36
n
36
LYS
36
A
MET
37
n
37
MET
37
A
ILE
38
n
38
ILE
38
A
ALA
39
n
39
ALA
39
A
PRO
40
n
40
PRO
40
A
ILE
41
n
41
ILE
41
A
LEU
42
n
42
LEU
42
A
ASP
43
n
43
ASP
43
A
GLU
44
n
44
GLU
44
A
ILE
45
n
45
ILE
45
A
ALA
46
n
46
ALA
46
A
ASP
47
n
47
ASP
47
A
GLU
48
n
48
GLU
48
A
TYR
49
n
49
TYR
49
A
GLN
50
n
50
GLN
50
A
GLY
51
n
51
GLY
51
A
LYS
52
n
52
LYS
52
A
LEU
53
n
53
LEU
53
A
THR
54
n
54
THR
54
A
VAL
55
n
55
VAL
55
A
ALA
56
n
56
ALA
56
A
LYS
57
n
57
LYS
57
A
LEU
58
n
58
LEU
58
A
ASN
59
n
59
ASN
59
A
ILE
60
n
60
ILE
60
A
ASP
61
n
61
ASP
61
A
GLN
62
n
62
GLN
62
A
ASN
63
n
63
ASN
63
A
PRO
64
n
64
PRO
64
A
GLY
65
n
65
GLY
65
A
THR
66
n
66
THR
66
A
ALA
67
n
67
ALA
67
A
PRO
68
n
68
PRO
68
A
LYS
69
n
69
LYS
69
A
TYR
70
n
70
TYR
70
A
GLY
71
n
71
GLY
71
A
ILE
72
n
72
ILE
72
A
ARG
73
n
73
ARG
73
A
GLY
74
n
74
GLY
74
A
ILE
75
n
75
ILE
75
A
PRO
76
n
76
PRO
76
A
THR
77
n
77
THR
77
A
LEU
78
n
78
LEU
78
A
LEU
79
n
79
LEU
79
A
LEU
80
n
80
LEU
80
A
PHE
81
n
81
PHE
81
A
LYS
82
n
82
LYS
82
A
ASN
83
n
83
ASN
83
A
GLY
84
n
84
GLY
84
A
GLU
85
n
85
GLU
85
A
VAL
86
n
86
VAL
86
A
ALA
87
n
87
ALA
87
A
ALA
88
n
88
ALA
88
A
THR
89
n
89
THR
89
A
LYS
90
n
90
LYS
90
A
VAL
91
n
91
VAL
91
A
GLY
92
n
92
GLY
92
A
ALA
93
n
93
ALA
93
A
LEU
94
n
94
LEU
94
A
SER
95
n
95
SER
95
A
LYS
96
n
96
LYS
96
A
GLY
97
n
97
GLY
97
A
GLN
98
n
98
GLN
98
A
LEU
99
n
99
LEU
99
A
LYS
100
n
100
LYS
100
A
GLU
101
n
101
GLU
101
A
PHE
102
n
102
PHE
102
A
LEU
103
n
103
LEU
103
A
ASP
104
n
104
ASP
104
A
ALA
105
n
105
ALA
105
A
ASN
106
n
106
ASN
106
A
LEU
107
n
107
LEU
107
A
ALA
108
n
108
ALA
108
A
n
1
1
B
ASP
2
n
2
ASP
2
B
LYS
3
n
3
LYS
3
B
ILE
4
n
4
ILE
4
B
ILE
5
n
5
ILE
5
B
HIS
6
n
6
HIS
6
B
LEU
7
n
7
LEU
7
B
THR
8
n
8
THR
8
B
ASP
9
n
9
ASP
9
B
GLU
10
n
10
GLU
10
B
SER
11
n
11
SER
11
B
PHE
12
n
12
PHE
12
B
ASP
13
n
13
ASP
13
B
THR
14
n
14
THR
14
B
ASP
15
n
15
ASP
15
B
VAL
16
n
16
VAL
16
B
LEU
17
n
17
LEU
17
B
LYS
18
n
18
LYS
18
B
ALA
19
n
19
ALA
19
B
ASP
20
n
20
ASP
20
B
GLY
21
n
21
GLY
21
B
ALA
22
n
22
ALA
22
B
ILE
23
n
23
ILE
23
B
LEU
24
n
24
LEU
24
B
VAL
25
n
25
VAL
25
B
ASP
26
n
26
ASP
26
B
PHE
27
n
27
PHE
27
B
TRP
28
n
28
TRP
28
B
ALA
29
n
29
ALA
29
B
GLU
30
n
30
GLU
30
B
TRP
31
n
31
TRP
31
B
CYS
32
n
32
CYS
32
B
GLY
33
n
33
GLY
33
B
PRO
34
n
34
PRO
34
B
CYS
35
n
35
CYS
35
B
LYS
36
n
36
LYS
36
B
MET
37
n
37
MET
37
B
ILE
38
n
38
ILE
38
B
ALA
39
n
39
ALA
39
B
PRO
40
n
40
PRO
40
B
ILE
41
n
41
ILE
41
B
LEU
42
n
42
LEU
42
B
ASP
43
n
43
ASP
43
B
GLU
44
n
44
GLU
44
B
ILE
45
n
45
ILE
45
B
ALA
46
n
46
ALA
46
B
ASP
47
n
47
ASP
47
B
GLU
48
n
48
GLU
48
B
TYR
49
n
49
TYR
49
B
GLN
50
n
50
GLN
50
B
GLY
51
n
51
GLY
51
B
LYS
52
n
52
LYS
52
B
LEU
53
n
53
LEU
53
B
THR
54
n
54
THR
54
B
VAL
55
n
55
VAL
55
B
ALA
56
n
56
ALA
56
B
LYS
57
n
57
LYS
57
B
LEU
58
n
58
LEU
58
B
ASN
59
n
59
ASN
59
B
ILE
60
n
60
ILE
60
B
ASP
61
n
61
ASP
61
B
GLN
62
n
62
GLN
62
B
ASN
63
n
63
ASN
63
B
PRO
64
n
64
PRO
64
B
GLY
65
n
65
GLY
65
B
THR
66
n
66
THR
66
B
ALA
67
n
67
ALA
67
B
PRO
68
n
68
PRO
68
B
LYS
69
n
69
LYS
69
B
TYR
70
n
70
TYR
70
B
GLY
71
n
71
GLY
71
B
ILE
72
n
72
ILE
72
B
ARG
73
n
73
ARG
73
B
GLY
74
n
74
GLY
74
B
ILE
75
n
75
ILE
75
B
PRO
76
n
76
PRO
76
B
THR
77
n
77
THR
77
B
LEU
78
n
78
LEU
78
B
LEU
79
n
79
LEU
79
B
LEU
80
n
80
LEU
80
B
PHE
81
n
81
PHE
81
B
LYS
82
n
82
LYS
82
B
ASN
83
n
83
ASN
83
B
GLY
84
n
84
GLY
84
B
GLU
85
n
85
GLU
85
B
VAL
86
n
86
VAL
86
B
ALA
87
n
87
ALA
87
B
ALA
88
n
88
ALA
88
B
THR
89
n
89
THR
89
B
LYS
90
n
90
LYS
90
B
VAL
91
n
91
VAL
91
B
GLY
92
n
92
GLY
92
B
ALA
93
n
93
ALA
93
B
LEU
94
n
94
LEU
94
B
SER
95
n
95
SER
95
B
LYS
96
n
96
LYS
96
B
GLY
97
n
97
GLY
97
B
GLN
98
n
98
GLN
98
B
LEU
99
n
99
LEU
99
B
LYS
100
n
100
LYS
100
B
GLU
101
n
101
GLU
101
B
PHE
102
n
102
PHE
102
B
LEU
103
n
103
LEU
103
B
ASP
104
n
104
ASP
104
B
ALA
105
n
105
ALA
105
B
ASN
106
n
106
ASN
106
B
LEU
107
n
107
LEU
107
B
ALA
108
n
108
ALA
108
B
2.2033
-1.9468
0.6431
4.8097
-3.1504
21.1891
0.2211
0.3566
-0.2838
-0.3991
-0.1273
-0.3317
1.0880
0.2973
-0.0937
0.0486
0.0147
0.0468
0.0951
-0.0442
0.1350
refined
-20.0640
3.4860
0.0500
X-RAY DIFFRACTION
10.8694
-8.4300
7.2003
10.8265
2.2480
19.0743
-0.0798
-0.7416
0.7543
1.0499
0.4475
0.0772
0.1709
0.3962
-0.3678
0.0715
-0.0219
0.0050
0.0748
-0.0014
0.1263
refined
-16.8810
10.3780
8.3330
X-RAY DIFFRACTION
3.6921
3.4240
-0.6119
4.9171
-0.0683
2.2117
0.0227
0.0218
-0.1370
0.1811
0.0179
-0.1206
0.0160
0.1019
-0.0406
0.0639
0.0175
-0.0017
0.0558
0.0003
0.1203
refined
-24.8050
9.1750
2.8520
X-RAY DIFFRACTION
6.1484
3.0422
-5.6752
6.2776
-1.8895
10.3949
0.0993
0.5446
-0.3673
-0.2575
0.2305
0.3495
0.1108
-0.2393
-0.3299
-0.0011
-0.0038
-0.0245
0.0566
-0.0468
0.1693
refined
-32.8810
2.3990
-4.8000
X-RAY DIFFRACTION
9.0664
-0.9537
5.5660
20.6331
-5.4632
5.5536
-0.0014
1.1082
-0.6590
-1.1126
0.0396
-0.3321
0.0291
0.1241
-0.0382
0.0105
-0.0066
0.0369
0.1410
-0.0703
-0.0154
refined
-23.0680
10.6500
-12.3030
X-RAY DIFFRACTION
1.5871
-0.4834
-0.1678
3.9121
-1.3432
0.5341
0.0240
-0.1912
-0.1227
0.4881
0.1335
0.0018
-0.0103
0.1307
-0.1574
0.0941
0.0016
0.0069
0.0574
0.0041
0.0835
refined
-26.0440
6.3710
8.2750
X-RAY DIFFRACTION
3.7985
-0.9631
0.1161
0.2466
-0.0337
0.0114
-0.0687
-0.2436
-0.1664
0.0437
0.0317
0.2403
0.1849
0.0931
0.0371
0.0723
-0.0217
0.0679
0.0233
-0.0108
0.1053
refined
-34.8340
11.7480
7.8300
X-RAY DIFFRACTION
2.8874
3.3569
-2.8761
3.9566
-2.8261
7.8322
0.0316
-0.3133
0.6805
-0.2829
-0.2360
-0.0932
-0.1949
0.1030
0.2045
0.0337
0.0206
0.0074
0.0205
-0.0005
0.1629
refined
-24.0010
19.2150
0.9430
X-RAY DIFFRACTION
2.6723
2.3245
2.7068
4.6443
0.0687
4.7342
0.1457
0.3148
0.0694
-0.1570
0.2507
0.2225
0.2503
0.0363
-0.3964
-0.0053
0.0166
-0.0101
0.0641
-0.0611
0.1666
refined
-35.7790
12.3070
-5.2980
X-RAY DIFFRACTION
1.1920
4.1427
2.7719
20.4721
3.5029
12.6344
0.1170
0.3393
0.1199
-0.7642
-0.1571
-0.3545
-0.7082
-0.0672
0.0402
-0.0051
0.0334
0.0014
0.0370
-0.0143
0.1291
refined
-30.8710
18.7650
-8.9980
X-RAY DIFFRACTION
8.1815
-1.0694
0.3932
6.7129
-1.0039
16.7058
0.0647
-0.2241
-0.4268
0.3296
-0.1950
0.7862
-0.0873
-0.1264
0.1302
0.0318
0.0460
0.0553
-0.0590
-0.1001
0.2644
refined
-42.2230
37.1010
7.2510
X-RAY DIFFRACTION
3.0136
-5.1843
0.3457
10.8689
-0.6140
0.0399
0.1973
0.1287
0.4857
-0.3238
-0.1410
0.0582
0.0499
0.0012
-0.0563
0.0666
0.0427
0.0810
-0.0034
-0.0592
0.1905
refined
-36.8160
42.7830
3.1930
X-RAY DIFFRACTION
1.2021
-0.4543
-0.3618
5.0263
0.2231
0.5127
-0.0464
-0.1777
0.1202
0.4956
0.0405
0.3236
-0.0017
0.0551
0.0060
0.0943
-0.0226
0.0925
0.0168
-0.0260
0.1008
refined
-34.7990
24.6710
9.4970
X-RAY DIFFRACTION
11.6619
-4.2439
0.6159
20.3069
2.7374
0.5000
-0.4924
-0.9854
0.2589
2.6658
0.7201
0.2516
0.5819
0.4376
-0.2276
0.3711
0.0408
0.0039
0.0557
-0.0722
-0.0872
refined
-26.6370
36.6570
15.7920
X-RAY DIFFRACTION
19.0427
12.5855
6.9562
15.1576
6.5883
7.7717
0.0553
-0.2237
0.8128
0.3643
-0.0474
0.6895
-0.4728
0.1261
-0.0079
0.0972
0.0568
0.0883
-0.0382
-0.0367
0.0697
refined
-34.9560
35.7400
8.3940
X-RAY DIFFRACTION
17.3921
2.3395
-7.8594
4.7471
-6.0751
9.2323
0.3082
0.4590
-0.0664
-0.4617
-0.2247
0.7560
-0.1760
-0.0996
-0.0836
0.1615
0.0315
-0.0370
-0.1056
-0.0778
0.0824
refined
-41.3020
30.0100
-2.6710
X-RAY DIFFRACTION
3.2588
2.8617
-1.2670
7.7891
-1.3805
0.5062
0.3009
0.2633
0.2796
-0.4760
-0.3953
0.4745
0.0437
-0.0994
0.0945
0.1003
0.0333
0.0183
0.0379
0.0007
0.1150
refined
-32.3340
30.1630
-0.1840
X-RAY DIFFRACTION
9.5660
-6.3799
2.4037
14.9632
-5.4924
6.5772
0.3552
0.4821
0.4581
-0.2881
-0.1772
-0.0059
-0.3686
-0.4047
-0.1779
0.0398
0.0515
0.0846
0.0663
-0.0089
0.0686
refined
-28.4560
36.2670
-0.7660
X-RAY DIFFRACTION
3.9454
1.7742
0.0890
11.7801
-9.0757
11.1896
0.0884
-0.4111
-0.2245
0.6872
0.0898
-0.2916
-0.3139
0.5157
-0.1781
0.0830
0.0138
-0.0066
0.1107
-0.0920
0.0127
refined
-20.8830
31.4890
8.9250
X-RAY DIFFRACTION
23.3211
0.0000
0.0000
33.6583
0.0000
21.7294
-0.1163
0.1158
1.2494
1.1459
0.6593
-2.3467
-1.2043
-0.1381
-0.5429
0.1163
-0.0664
-0.0257
-0.0071
-0.0923
0.0424
refined
-20.9850
40.4300
5.4880
X-RAY DIFFRACTION
A
1
A
1
A
9
A
9
X-RAY DIFFRACTION
1
ALL
A
10
A
10
A
14
A
14
X-RAY DIFFRACTION
2
ALL
A
15
A
15
A
31
A
31
X-RAY DIFFRACTION
3
ALL
A
32
A
32
A
46
A
46
X-RAY DIFFRACTION
4
ALL
A
47
A
47
A
53
A
53
X-RAY DIFFRACTION
5
ALL
A
54
A
54
A
69
A
69
X-RAY DIFFRACTION
6
ALL
A
70
A
70
A
78
A
78
X-RAY DIFFRACTION
7
ALL
A
79
A
79
A
86
A
86
X-RAY DIFFRACTION
8
ALL
A
87
A
87
A
100
A
100
X-RAY DIFFRACTION
9
ALL
A
101
A
101
A
108
A
108
X-RAY DIFFRACTION
10
ALL
B
2
B
2
B
13
B
13
X-RAY DIFFRACTION
11
ALL
B
14
B
14
B
25
B
25
X-RAY DIFFRACTION
12
ALL
B
26
B
26
B
43
B
43
X-RAY DIFFRACTION
13
ALL
B
44
B
44
B
49
B
49
X-RAY DIFFRACTION
14
ALL
B
50
B
50
B
60
B
60
X-RAY DIFFRACTION
15
ALL
B
61
B
61
B
72
B
72
X-RAY DIFFRACTION
16
ALL
B
73
B
73
B
81
B
81
X-RAY DIFFRACTION
17
ALL
B
82
B
82
B
94
B
94
X-RAY DIFFRACTION
18
ALL
B
95
B
95
B
102
B
102
X-RAY DIFFRACTION
19
ALL
B
103
B
103
B
108
B
108
X-RAY DIFFRACTION
20
ALL
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
5
A
N
ILE
5
A
O
LYS
57
A
O
LYS
57
A
O
LEU
58
A
O
LEU
58
A
N
ASP
26
A
N
ASP
26
A
N
ILE
23
A
N
ILE
23
A
O
PHE
81
A
O
PHE
81
A
N
LEU
80
A
N
LEU
80
A
O
ALA
87
A
O
ALA
87
B
N
LEU
7
B
N
LEU
7
B
O
LYS
57
B
O
LYS
57
B
O
ALA
56
B
O
ALA
56
B
N
ASP
26
B
N
ASP
26
B
N
PHE
27
B
N
PHE
27
B
O
THR
77
B
O
THR
77
B
N
LYS
82
B
N
LYS
82
B
O
GLU
85
B
O
GLU
85
1
B
SER
1
B
SER
1
1
Y
1
6.92
0.90
118.30
125.22
B
B
B
CB
CG
OD1
ASP
ASP
ASP
20
20
20
N
1
A
ASP
2
-105.29
-81.99
1
A
ARG
73
-121.48
-84.82
1
A
ARG
73
-122.01
-84.01
1
A
ARG
73
-122.17
-83.72
1
B
ASN
83
39.50
53.35
26.620
-2.082
-1.041
0.000
-2.082
0.000
3.123
0.949
0.905
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.268
0.1954
0.202
0.202
2.250
51.580
1186
12308
12106
9.797
98.447
0.256
0.189
13.361
0.173
Random
LIKELY RESIDUAL
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.322
0.256
0.800
0.800
1.400
pdb entry 2TRX
MAXIMUM LIKELIHOOD
MASK BULK SOLVENT
2.250
51.580
99
1755
16
0
1640
0.014
0.022
1750
1.403
1.994
2386
5.783
5.000
228
36.268
26.250
72
15.798
15.000
314
24.691
15.000
4
0.087
0.200
275
0.005
0.020
1290
0.207
0.200
736
0.306
0.200
1140
0.397
0.200
116
0.183
0.200
21
0.232
0.200
7
1.232
2.000
1128
1.832
3.000
1761
1.134
2.000
710
1.648
3.000
617
0.314
0.235
0.242
2.308
66
799
892
20
96.973
0.257
0.223
0.227
2.372
78
813
897
20
99.331
0.336
0.23
0.240
2.440
67
742
836
20
96.770
0.359
0.226
0.242
2.515
105
708
828
20
98.188
0.309
0.224
0.233
2.597
86
710
811
20
98.150
0.298
0.212
0.220
2.688
77
675
765
20
98.301
0.308
0.204
0.214
2.789
78
684
775
20
98.323
0.4
0.214
0.227
2.903
56
630
702
20
97.721
0.296
0.223
0.231
3.032
73
614
698
20
98.424
0.267
0.19
0.198
3.179
68
599
675
20
98.815
0.276
0.187
0.196
3.350
58
554
618
20
99.029
0.265
0.189
0.196
3.553
59
541
606
20
99.010
0.206
0.167
0.171
3.797
62
505
571
20
99.299
0.197
0.16
0.164
4.099
56
468
527
20
99.431
0.224
0.164
0.170
4.487
51
443
494
20
100.000
0.217
0.164
0.169
5.012
38
398
436
20
100.000
0.266
0.197
0.204
5.779
41
361
402
20
100.000
0.257
0.222
0.225
7.055
29
311
340
20
100.000
0.25
0.186
0.192
9.886
25
234
260
20
99.615
0.471
0.258
0.271
51.580
13
131
164
20
87.805
37.35
2.25
51.58
2H76
12308
12308
0.0241
1
27.13
28.93
99.9
2.25
2.30
6.46
779
0.1501
1
22.28
100.0
data scaling
http://www.bruker-axs.de/index.html
SAINT
package
phasing
A. Vagin
alexei@ysbl.york.ac.uk
Fortran
http://www.ccp4.ac.uk/dist/html/molrep.html
MOLREP
program
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
24/04/2001
Fortran
http://www.ccp4.ac.uk/main.html
REFMAC
program
refmac_5.2.0019
data extraction
PDB
sw-help@rcsb.rutgers.edu
July 20, 2005
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
1.700
data reduction
PROTEUM PLUS
2
data scaling
SADABS
data reduction
XPREP
model building
Coot
model building
MolProbity
Crystal Structure of Thioredoxin Mutant D10E in Hexagonal (p61) Space Group
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
SER
11
A
SER
11
HELX_P
A
VAL
16
A
VAL
16
1
1
6
A
CYS
32
A
CYS
32
HELX_P
A
TYR
49
A
TYR
49
1
2
18
A
THR
66
A
THR
66
HELX_P
A
GLY
71
A
GLY
71
5
3
6
A
SER
95
A
SER
95
HELX_P
A
ALA
108
A
ALA
108
1
4
14
B
SER
11
B
SER
11
HELX_P
B
VAL
16
B
VAL
16
1
5
6
B
CYS
32
B
CYS
32
HELX_P
B
TYR
49
B
TYR
49
1
6
18
B
THR
66
B
THR
66
HELX_P
B
GLY
71
B
GLY
71
5
7
6
B
SER
95
B
SER
95
HELX_P
B
ALA
108
B
ALA
108
1
8
14
disulf
2.120
A
CYS
32
A
SG
CYS
32
1_555
A
CYS
35
A
SG
CYS
35
1_555
disulf
2.079
B
CYS
32
B
SG
CYS
32
1_555
B
CYS
35
B
SG
CYS
35
1_555
LYASE
Alpha Beta, Electron transport, LYASE
A
ILE
75
A
ILE
75
1
A
PRO
76
A
PRO
76
-3.27
B
ILE
75
B
ILE
75
1
B
PRO
76
B
PRO
76
1.98
Q2M889_ECOLI
UNP
1
2
Q2M889
SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL
FKNGEVAATKVGALSKGQLKEFLDANLA
2
109
2H76
1
108
Q2M889
A
1
1
108
2
109
2H76
1
108
Q2M889
B
1
1
108
1
ASP
engineered mutation
GLU
10
2H76
A
Q2M889
UNP
11
10
2
ASP
engineered mutation
GLU
10
2H76
B
Q2M889
UNP
11
10
5
5
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
A
ILE
5
A
ILE
5
A
HIS
6
A
HIS
6
A
LEU
53
A
LEU
53
A
ASN
59
A
ASN
59
A
ALA
22
A
ALA
22
A
TRP
28
A
TRP
28
A
THR
77
A
THR
77
A
LYS
82
A
LYS
82
A
GLU
85
A
GLU
85
A
VAL
91
A
VAL
91
B
ILE
5
B
ILE
5
B
LEU
7
B
LEU
7
B
LEU
53
B
LEU
53
B
ASN
59
B
ASN
59
B
ALA
22
B
ALA
22
B
TRP
28
B
TRP
28
B
THR
77
B
THR
77
B
LYS
82
B
LYS
82
B
GLU
85
B
GLU
85
B
VAL
86
B
VAL
86
BINDING SITE FOR RESIDUE MPD A 501
A
MPD
501
Software
2
BINDING SITE FOR RESIDUE MPD A 502
A
MPD
502
Software
5
A
ARG
73
A
ARG
73
2
1_555
A
HOH
545
E
HOH
2
1_555
A
ASP
20
A
ASP
20
5
1_555
A
GLY
21
A
GLY
21
5
1_555
A
ALA
22
A
ALA
22
5
1_555
A
LEU
53
A
LEU
53
5
1_555
A
THR
54
A
THR
54
5
1_555
169
P 61