0.015184 0.008766 0.000000 0.000000 0.017533 0.000000 0.000000 0.000000 0.003773 0.00000 0.00000 0.00000 Ciesielski, F. Rochel, N. Moras, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 65.859 65.859 265.018 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C32 H54 O4 502.769 21-NOR-9,10-SECOCHOLESTA-5,7,10(19)-TRIENE-1,3,25-TRIOL, 20-(4-HYDROXY-4-METHYLPENTYL)-, (1A,3B,5Z,7E) GEMINI non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N O N 75 N O N 76 S C N 77 N C N 78 R C N 79 N C N 80 N C N 81 N C N 82 N C N 83 N C N 84 N C N 85 N C N 86 N C N 87 N C N 88 R C N 89 S C N 90 N C N 91 N C N 92 R C N 93 N C N 94 N C N 95 N C N 96 N C N 97 N C N 98 N C N 99 N C N 100 N C N 101 N C N 102 N O N 103 N C N 104 N C N 105 N C N 106 N C N 107 N O N 108 N C N 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N N N 165 R C N 166 N C N 167 N O N 168 N C N 169 N S N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 N C N 183 N C N 184 N C N 185 N O N 186 N N N 187 N O N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N N N 199 S C N 200 N C N 201 N O N 202 N C N 203 N C N 204 N C N 205 N O N 206 N O N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 N C N 219 N C N 220 N O N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 S C N 229 N C N 230 N O N 231 N C Y 232 N C Y 233 N N Y 234 N C Y 235 N C Y 236 N N N 237 N O N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N O N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 S C N 256 N C N 257 N C N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N N N 296 S C N 297 N C N 298 N O N 299 N C N 300 N C N 301 N C N 302 N C N 303 N N N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N N N 321 S C N 322 N C N 323 N O N 324 N C N 325 N C N 326 N S N 327 N C N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N N N 341 S C N 342 N C N 343 N O N 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C Y 349 N C Y 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N N N 364 S C N 365 N C N 366 N O N 367 N C N 368 N C N 369 N C N 370 N O N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 N C N 385 N O N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N N N 395 S C N 396 N C N 397 N O N 398 R C N 399 N O N 400 N C N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N N N 412 S C N 413 N C N 414 N O N 415 N C Y 416 N C Y 417 N C Y 418 N C Y 419 N N Y 420 N C Y 421 N C Y 422 N C Y 423 N C Y 424 N C N 425 N O N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N N N 439 S C N 440 N C N 441 N O N 442 N C Y 443 N C Y 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N C N 449 N O N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N N N 463 S C N 464 N C N 465 N O N 466 N C N 467 N C N 468 N C N 469 N O N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N H N 479 N H N 480 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 Z doub N 87 N sing N 88 N sing N 89 N sing N 90 E doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N doub N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing Y 232 N sing Y 233 N doub Y 234 N doub N 235 N sing Y 236 N sing N 237 N sing Y 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N doub N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N doub N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N doub N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing Y 340 N doub Y 341 N sing Y 342 N sing N 343 N sing Y 344 N doub N 345 N sing Y 346 N doub N 347 N sing Y 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N doub N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing Y 409 N doub Y 410 N sing Y 411 N sing N 412 N sing Y 413 N doub Y 414 N sing Y 415 N sing N 416 N sing Y 417 N sing Y 418 N doub N 419 N sing Y 420 N doub N 421 N sing Y 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing Y 437 N doub Y 438 N sing Y 439 N sing N 440 N sing Y 441 N doub N 442 N sing Y 443 N doub N 444 N sing Y 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N doub N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing UK J.Steroid Biochem.Mol.Biol. JSBBEZ 2046 0960-0760 103 235 242 10.1016/j.jsbmb.2006.12.003 17218092 Adaptability of the Vitamin D nuclear receptor to the synthetic ligand Gemini: remodelling the LBP with one side chain rotation 2007 10.2210/pdb2hcd/pdb pdb_00002hcd 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2002-11-15 MAR CCD 165 mm Si111 SINGLE WAVELENGTH M x-ray 1 1.073 1.0 X06SA SLS 1.073 SYNCHROTRON SLS BEAMLINE X06SA 34060.672 Vitamin D receptor Ligand binding domain 1 man polymer 1776.072 SRC-1 from Nuclear receptor coactivator 1 1 syn polymer 502.769 21-NOR-9,10-SECOCHOLESTA-5,7,10(19)-TRIENE-1,3,25-TRIOL, 20-(4-HYDROXY-4-METHYLPENTYL)-, (1A,3B,5Z,7E) 1 syn non-polymer 18.015 water 38 nat water NCoA-1, Steroid receptor coactivator 1, SRC-1, RIP160, Protein Hin-2, NY-REN-52 antigen no no GSHMLSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVREGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKLNFSNL LMMYQDSGSPDSSEEDQQSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLED MSWSCGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVL QAYIRIQHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS GSHMLSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVREGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKLNFSNL LMMYQDSGSPDSSEEDQQSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLED MSWSCGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVL QAYIRIQHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS A polypeptide(L) no no RHKILHRLLQEGSPS RHKILHRLLQEGSPS B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n zebrafish Danio Escherichia Escherichia coli sample 7955 Danio rerio 469008 Escherichia coli BL21(DE3) BL21DE3 plasmid pET28b 1 2.31 46.84 VAPOR DIFFUSION, HANGING DROP 6.5 Li sulfate 1.6M, Mgsulfate 50mM, Bis tris 0.1M, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 pdbx_entity_src_syn pdbx_struct_assembly pdbx_struct_assembly_gen pdbx_struct_assembly_prop pdbx_unobs_or_zero_occ_atoms struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_unobs_or_zero_occ_atoms repository Initial release Version format compliance Version format compliance Advisory Database references Derived calculations Source and taxonomy Advisory Data collection Database references Refinement description 1 0 2007-05-01 1 1 2008-05-01 1 2 2011-07-13 1 3 2021-03-03 1 4 2023-10-25 _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.organism_scientific _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y PDBJ 2006-06-16 REL REL BIV 21-NOR-9,10-SECOCHOLESTA-5,7,10(19)-TRIENE-1,3,25-TRIOL, 20-(4-HYDROXY-4-METHYLPENTYL)-, (1A,3B,5Z,7E) HOH water This sequence occurs naturally in humans. 9606 Homo sapiens sample 2HC4 PDB experimental model BIV 525 3 BIV BIV 525 A HOH 1 4 HOH HOH 1 A HOH 2 4 HOH HOH 2 A HOH 3 4 HOH HOH 3 A HOH 4 4 HOH HOH 4 A HOH 5 4 HOH HOH 5 A HOH 6 4 HOH HOH 6 A HOH 7 4 HOH HOH 7 A HOH 8 4 HOH HOH 8 A HOH 9 4 HOH HOH 9 A HOH 10 4 HOH HOH 10 A HOH 11 4 HOH HOH 11 A HOH 12 4 HOH HOH 12 A HOH 13 4 HOH HOH 13 A HOH 14 4 HOH HOH 14 A HOH 15 4 HOH HOH 15 A HOH 16 4 HOH HOH 16 A HOH 17 4 HOH HOH 17 A HOH 18 4 HOH HOH 18 A HOH 19 4 HOH HOH 19 A HOH 20 4 HOH HOH 20 A HOH 21 4 HOH HOH 21 A HOH 22 4 HOH HOH 22 A HOH 23 4 HOH HOH 23 A HOH 24 4 HOH HOH 24 A HOH 25 4 HOH HOH 25 A HOH 26 4 HOH HOH 26 A HOH 27 4 HOH HOH 27 A HOH 28 4 HOH HOH 28 A HOH 29 4 HOH HOH 29 A HOH 30 4 HOH HOH 30 A HOH 31 4 HOH HOH 31 A HOH 32 4 HOH HOH 32 A HOH 33 4 HOH HOH 33 A HOH 34 4 HOH HOH 34 A HOH 35 4 HOH HOH 35 A HOH 36 4 HOH HOH 36 A HOH 37 4 HOH HOH 37 A HOH 38 4 HOH HOH 38 A n 1 152 A n 2 153 A HIS 154 n 3 HIS 154 A MET 155 n 4 MET 155 A LEU 156 n 5 LEU 156 A SER 157 n 6 SER 157 A ASP 158 n 7 ASP 158 A GLU 159 n 8 GLU 159 A GLN 160 n 9 GLN 160 A MET 161 n 10 MET 161 A GLN 162 n 11 GLN 162 A ILE 163 n 12 ILE 163 A ILE 164 n 13 ILE 164 A ASN 165 n 14 ASN 165 A SER 166 n 15 SER 166 A LEU 167 n 16 LEU 167 A VAL 168 n 17 VAL 168 A GLU 169 n 18 GLU 169 A ALA 170 n 19 ALA 170 A HIS 171 n 20 HIS 171 A HIS 172 n 21 HIS 172 A LYS 173 n 22 LYS 173 A THR 174 n 23 THR 174 A TYR 175 n 24 TYR 175 A ASP 176 n 25 ASP 176 A ASP 177 n 26 ASP 177 A SER 178 n 27 SER 178 A TYR 179 n 28 TYR 179 A SER 180 n 29 SER 180 A ASP 181 n 30 ASP 181 A PHE 182 n 31 PHE 182 A VAL 183 n 32 VAL 183 A ARG 184 n 33 ARG 184 A PHE 185 n 34 PHE 185 A ARG 186 n 35 ARG 186 A PRO 187 n 36 PRO 187 A PRO 188 n 37 PRO 188 A VAL 189 n 38 VAL 189 A ARG 190 n 39 ARG 190 A n 40 191 A n 41 192 A n 42 193 A n 43 194 A n 44 195 A n 45 196 A n 46 197 A n 47 198 A n 48 199 A n 49 200 A n 50 201 A n 51 202 A n 52 203 A n 53 204 A n 54 205 A n 55 206 A n 56 207 A n 57 208 A n 58 209 A n 59 210 A n 60 211 A n 61 212 A n 62 213 A n 63 214 A n 64 215 A n 65 216 A n 66 217 A n 67 218 A n 68 219 A n 69 220 A n 70 221 A n 71 222 A n 72 223 A n 73 224 A n 74 225 A n 75 226 A n 76 227 A n 77 228 A n 78 229 A n 79 230 A n 80 231 A n 81 232 A n 82 233 A n 83 234 A n 84 235 A n 85 236 A n 86 237 A n 87 238 A n 88 239 A n 89 240 A n 90 241 A n 91 242 A n 92 243 A n 93 244 A n 94 245 A n 95 246 A n 96 247 A n 97 248 A n 98 249 A n 99 250 A ARG 251 n 100 ARG 251 A LEU 252 n 101 LEU 252 A SER 253 n 102 SER 253 A MET 254 n 103 MET 254 A LEU 255 n 104 LEU 255 A PRO 256 n 105 PRO 256 A HIS 257 n 106 HIS 257 A LEU 258 n 107 LEU 258 A ALA 259 n 108 ALA 259 A ASP 260 n 109 ASP 260 A LEU 261 n 110 LEU 261 A VAL 262 n 111 VAL 262 A SER 263 n 112 SER 263 A TYR 264 n 113 TYR 264 A SER 265 n 114 SER 265 A ILE 266 n 115 ILE 266 A GLN 267 n 116 GLN 267 A LYS 268 n 117 LYS 268 A VAL 269 n 118 VAL 269 A ILE 270 n 119 ILE 270 A GLY 271 n 120 GLY 271 A PHE 272 n 121 PHE 272 A ALA 273 n 122 ALA 273 A LYS 274 n 123 LYS 274 A MET 275 n 124 MET 275 A ILE 276 n 125 ILE 276 A PRO 277 n 126 PRO 277 A GLY 278 n 127 GLY 278 A PHE 279 n 128 PHE 279 A ARG 280 n 129 ARG 280 A ASP 281 n 130 ASP 281 A LEU 282 n 131 LEU 282 A THR 283 n 132 THR 283 A ALA 284 n 133 ALA 284 A GLU 285 n 134 GLU 285 A ASP 286 n 135 ASP 286 A GLN 287 n 136 GLN 287 A ILE 288 n 137 ILE 288 A ALA 289 n 138 ALA 289 A LEU 290 n 139 LEU 290 A LEU 291 n 140 LEU 291 A LYS 292 n 141 LYS 292 A SER 293 n 142 SER 293 A SER 294 n 143 SER 294 A ALA 295 n 144 ALA 295 A ILE 296 n 145 ILE 296 A GLU 297 n 146 GLU 297 A ILE 298 n 147 ILE 298 A ILE 299 n 148 ILE 299 A MET 300 n 149 MET 300 A LEU 301 n 150 LEU 301 A ARG 302 n 151 ARG 302 A SER 303 n 152 SER 303 A ASN 304 n 153 ASN 304 A GLN 305 n 154 GLN 305 A SER 306 n 155 SER 306 A PHE 307 n 156 PHE 307 A SER 308 n 157 SER 308 A LEU 309 n 158 LEU 309 A GLU 310 n 159 GLU 310 A ASP 311 n 160 ASP 311 A MET 312 n 161 MET 312 A SER 313 n 162 SER 313 A TRP 314 n 163 TRP 314 A SER 315 n 164 SER 315 A CYS 316 n 165 CYS 316 A GLY 317 n 166 GLY 317 A GLY 318 n 167 GLY 318 A PRO 319 n 168 PRO 319 A ASP 320 n 169 ASP 320 A PHE 321 n 170 PHE 321 A LYS 322 n 171 LYS 322 A TYR 323 n 172 TYR 323 A CYS 324 n 173 CYS 324 A ILE 325 n 174 ILE 325 A ASN 326 n 175 ASN 326 A ASP 327 n 176 ASP 327 A VAL 328 n 177 VAL 328 A THR 329 n 178 THR 329 A LYS 330 n 179 LYS 330 A ALA 331 n 180 ALA 331 A GLY 332 n 181 GLY 332 A HIS 333 n 182 HIS 333 A THR 334 n 183 THR 334 A LEU 335 n 184 LEU 335 A GLU 336 n 185 GLU 336 A LEU 337 n 186 LEU 337 A LEU 338 n 187 LEU 338 A GLU 339 n 188 GLU 339 A PRO 340 n 189 PRO 340 A LEU 341 n 190 LEU 341 A VAL 342 n 191 VAL 342 A LYS 343 n 192 LYS 343 A PHE 344 n 193 PHE 344 A GLN 345 n 194 GLN 345 A VAL 346 n 195 VAL 346 A GLY 347 n 196 GLY 347 A LEU 348 n 197 LEU 348 A LYS 349 n 198 LYS 349 A LYS 350 n 199 LYS 350 A LEU 351 n 200 LEU 351 A LYS 352 n 201 LYS 352 A LEU 353 n 202 LEU 353 A HIS 354 n 203 HIS 354 A GLU 355 n 204 GLU 355 A GLU 356 n 205 GLU 356 A GLU 357 n 206 GLU 357 A HIS 358 n 207 HIS 358 A VAL 359 n 208 VAL 359 A LEU 360 n 209 LEU 360 A LEU 361 n 210 LEU 361 A MET 362 n 211 MET 362 A ALA 363 n 212 ALA 363 A ILE 364 n 213 ILE 364 A CYS 365 n 214 CYS 365 A LEU 366 n 215 LEU 366 A LEU 367 n 216 LEU 367 A SER 368 n 217 SER 368 A PRO 369 n 218 PRO 369 A ASP 370 n 219 ASP 370 A ARG 371 n 220 ARG 371 A PRO 372 n 221 PRO 372 A GLY 373 n 222 GLY 373 A VAL 374 n 223 VAL 374 A GLN 375 n 224 GLN 375 A ASP 376 n 225 ASP 376 A HIS 377 n 226 HIS 377 A VAL 378 n 227 VAL 378 A ARG 379 n 228 ARG 379 A ILE 380 n 229 ILE 380 A GLU 381 n 230 GLU 381 A ALA 382 n 231 ALA 382 A LEU 383 n 232 LEU 383 A GLN 384 n 233 GLN 384 A ASP 385 n 234 ASP 385 A ARG 386 n 235 ARG 386 A LEU 387 n 236 LEU 387 A CYS 388 n 237 CYS 388 A ASP 389 n 238 ASP 389 A VAL 390 n 239 VAL 390 A LEU 391 n 240 LEU 391 A GLN 392 n 241 GLN 392 A ALA 393 n 242 ALA 393 A TYR 394 n 243 TYR 394 A ILE 395 n 244 ILE 395 A ARG 396 n 245 ARG 396 A ILE 397 n 246 ILE 397 A GLN 398 n 247 GLN 398 A HIS 399 n 248 HIS 399 A PRO 400 n 249 PRO 400 A GLY 401 n 250 GLY 401 A GLY 402 n 251 GLY 402 A ARG 403 n 252 ARG 403 A LEU 404 n 253 LEU 404 A LEU 405 n 254 LEU 405 A TYR 406 n 255 TYR 406 A ALA 407 n 256 ALA 407 A LYS 408 n 257 LYS 408 A MET 409 n 258 MET 409 A ILE 410 n 259 ILE 410 A GLN 411 n 260 GLN 411 A LYS 412 n 261 LYS 412 A LEU 413 n 262 LEU 413 A ALA 414 n 263 ALA 414 A ASP 415 n 264 ASP 415 A LEU 416 n 265 LEU 416 A ARG 417 n 266 ARG 417 A SER 418 n 267 SER 418 A LEU 419 n 268 LEU 419 A ASN 420 n 269 ASN 420 A GLU 421 n 270 GLU 421 A GLU 422 n 271 GLU 422 A HIS 423 n 272 HIS 423 A SER 424 n 273 SER 424 A LYS 425 n 274 LYS 425 A GLN 426 n 275 GLN 426 A TYR 427 n 276 TYR 427 A ARG 428 n 277 ARG 428 A SER 429 n 278 SER 429 A LEU 430 n 279 LEU 430 A SER 431 n 280 SER 431 A PHE 432 n 281 PHE 432 A GLN 433 n 282 GLN 433 A PRO 434 n 283 PRO 434 A GLU 435 n 284 GLU 435 A HIS 436 n 285 HIS 436 A SER 437 n 286 SER 437 A MET 438 n 287 MET 438 A GLN 439 n 288 GLN 439 A LEU 440 n 289 LEU 440 A THR 441 n 290 THR 441 A PRO 442 n 291 PRO 442 A LEU 443 n 292 LEU 443 A VAL 444 n 293 VAL 444 A LEU 445 n 294 LEU 445 A GLU 446 n 295 GLU 446 A VAL 447 n 296 VAL 447 A PHE 448 n 297 PHE 448 A GLY 449 n 298 GLY 449 A SER 450 n 299 SER 450 A GLU 451 n 300 GLU 451 A VAL 452 n 301 VAL 452 A n 302 453 A ARG 686 n 1 ARG 686 B HIS 687 n 2 HIS 687 B LYS 688 n 3 LYS 688 B ILE 689 n 4 ILE 689 B LEU 690 n 5 LEU 690 B HIS 691 n 6 HIS 691 B ARG 692 n 7 ARG 692 B LEU 693 n 8 LEU 693 B LEU 694 n 9 LEU 694 B GLN 695 n 10 GLN 695 B n 11 696 B n 12 697 B n 13 698 B n 14 699 B n 15 700 B author_and_software_defined_assembly PISA 4 tetrameric 6560 -34 21710 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 10_665 -y+1,-x+1,-z+1/6 crystal symmetry operation 32.9295000000 57.0355670678 44.1696666667 A N SER 308 A N SER 157 A O SER 313 A O SER 162 A N TRP 314 A N TRP 163 A O TYR 323 A O TYR 172 1 A CG GLU 451 A CG GLU 300 1 Y 1 A CD GLU 451 A CD GLU 300 1 Y 1 A OE1 GLU 451 A OE1 GLU 300 1 Y 1 A OE2 GLU 451 A OE2 GLU 300 1 Y 1 A CG1 VAL 452 A CG1 VAL 301 1 Y 1 A CG2 VAL 452 A CG2 VAL 301 1 Y 1 B CB ARG 686 B CB ARG 1 1 Y 1 B CG ARG 686 B CG ARG 1 1 Y 1 B CD ARG 686 B CD ARG 1 1 Y 1 B NE ARG 686 B NE ARG 1 1 Y 1 B CZ ARG 686 B CZ ARG 1 1 Y 1 B NH1 ARG 686 B NH1 ARG 1 1 Y 1 B NH2 ARG 686 B NH2 ARG 1 1 Y 1 B CG LYS 688 B CG LYS 3 0 Y 1 B CD LYS 688 B CD LYS 3 0 Y 1 B CE LYS 688 B CE LYS 3 0 Y 1 B NZ LYS 688 B NZ LYS 3 0 Y 1 B CG GLN 695 B CG GLN 10 1 Y 1 B CD GLN 695 B CD GLN 10 1 Y 1 B OE1 GLN 695 B OE1 GLN 10 1 Y 1 B NE2 GLN 695 B NE2 GLN 10 1 Y 1 A GLY 152 A GLY 1 1 Y 1 A SER 153 A SER 2 1 Y 1 A GLU 191 A GLU 40 1 Y 1 A GLY 192 A GLY 41 1 Y 1 A PRO 193 A PRO 42 1 Y 1 A VAL 194 A VAL 43 1 Y 1 A THR 195 A THR 44 1 Y 1 A ARG 196 A ARG 45 1 Y 1 A SER 197 A SER 46 1 Y 1 A ALA 198 A ALA 47 1 Y 1 A SER 199 A SER 48 1 Y 1 A ARG 200 A ARG 49 1 Y 1 A ALA 201 A ALA 50 1 Y 1 A ALA 202 A ALA 51 1 Y 1 A SER 203 A SER 52 1 Y 1 A LEU 204 A LEU 53 1 Y 1 A HIS 205 A HIS 54 1 Y 1 A SER 206 A SER 55 1 Y 1 A LEU 207 A LEU 56 1 Y 1 A SER 208 A SER 57 1 Y 1 A ASP 209 A ASP 58 1 Y 1 A ALA 210 A ALA 59 1 Y 1 A SER 211 A SER 60 1 Y 1 A SER 212 A SER 61 1 Y 1 A ASP 213 A ASP 62 1 Y 1 A SER 214 A SER 63 1 Y 1 A PHE 215 A PHE 64 1 Y 1 A ASN 216 A ASN 65 1 Y 1 A HIS 217 A HIS 66 1 Y 1 A SER 218 A SER 67 1 Y 1 A PRO 219 A PRO 68 1 Y 1 A GLU 220 A GLU 69 1 Y 1 A SER 221 A SER 70 1 Y 1 A VAL 222 A VAL 71 1 Y 1 A ASP 223 A ASP 72 1 Y 1 A THR 224 A THR 73 1 Y 1 A LYS 225 A LYS 74 1 Y 1 A LEU 226 A LEU 75 1 Y 1 A ASN 227 A ASN 76 1 Y 1 A PHE 228 A PHE 77 1 Y 1 A SER 229 A SER 78 1 Y 1 A ASN 230 A ASN 79 1 Y 1 A LEU 231 A LEU 80 1 Y 1 A LEU 232 A LEU 81 1 Y 1 A MET 233 A MET 82 1 Y 1 A MET 234 A MET 83 1 Y 1 A TYR 235 A TYR 84 1 Y 1 A GLN 236 A GLN 85 1 Y 1 A ASP 237 A ASP 86 1 Y 1 A SER 238 A SER 87 1 Y 1 A GLY 239 A GLY 88 1 Y 1 A SER 240 A SER 89 1 Y 1 A PRO 241 A PRO 90 1 Y 1 A ASP 242 A ASP 91 1 Y 1 A SER 243 A SER 92 1 Y 1 A SER 244 A SER 93 1 Y 1 A GLU 245 A GLU 94 1 Y 1 A GLU 246 A GLU 95 1 Y 1 A ASP 247 A ASP 96 1 Y 1 A GLN 248 A GLN 97 1 Y 1 A GLN 249 A GLN 98 1 Y 1 A SER 250 A SER 99 1 Y 1 A SER 453 A SER 302 1 Y 1 B GLU 696 B GLU 11 1 Y 1 B GLY 697 B GLY 12 1 Y 1 B SER 698 B SER 13 1 Y 1 B PRO 699 B PRO 14 1 Y 1 B SER 700 B SER 15 1 Y 1 A ILE 325 -34.80 -30.18 1 A THR 334 -90.52 -153.74 1 A LYS 352 33.16 53.86 1 A GLN 375 -90.90 -75.22 1 A LEU 405 -30.07 -71.34 1 A GLU 451 -61.38 55.96 0.26 0.204 0.23 0.227 2.6 20 447 8557 8557 random 1 2.0 MOLECULAR REPLACEMENT 2HC4 Engh & Huber 2.6 20 38 2069 36 0 1995 1.15 0.007 2.6 20.0 2HCD 11333 11333 1.0 1.0 1 85.5 2.6 2.69 68.5 refinement CNS data collection ADSC data scaling HKL-2000 phasing CNS Crystal structure of the ligand binding domain of the Vitamin D nuclear receptor in complex with Gemini and a coactivator peptide 1 N N 2 N N 3 N N 4 N N A SER 157 A SER 6 HELX_P A THR 174 A THR 23 1 1 18 A TYR 179 A TYR 28 HELX_P A ARG 184 A ARG 33 5 2 6 A MET 254 A MET 103 HELX_P A MET 275 A MET 124 1 3 22 A THR 283 A THR 132 HELX_P A ASN 304 A ASN 153 1 4 22 A GLY 318 A GLY 167 HELX_P A ASP 320 A ASP 169 5 5 3 A VAL 328 A VAL 177 HELX_P A GLY 332 A GLY 181 5 6 5 A LEU 338 A LEU 187 HELX_P A LYS 350 A LYS 199 1 7 13 A HIS 354 A HIS 203 HELX_P A LEU 367 A LEU 216 1 8 14 A VAL 378 A VAL 227 HELX_P A HIS 399 A HIS 248 1 9 22 A LEU 404 A LEU 253 HELX_P A GLN 433 A GLN 282 1 10 30 A GLN 433 A GLN 282 HELX_P A MET 438 A MET 287 1 11 6 A THR 441 A THR 290 HELX_P A PHE 448 A PHE 297 1 12 8 B HIS 687 B HIS 2 HELX_P B LEU 694 B LEU 9 1 13 8 GENE REGULATION alpha helical sandwich, GENE REGULATION Q9PTN2_BRARE UNP 1 156 Q9PTN2 LSDEQMQIINSLVEAHHKTYDDSYSDFVRFRPPVREGPVTRSASRAASLHSLSDASSDSFNHSPESVDTKLNFSNLLMMY QDSGSPDSSEEDQQSRLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWS CGGPDFKYCINDVTKAGHTLELLEPLVKFQVGLKKLKLHEEEHVLLMAICLLSPDRPGVQDHVRIEALQDRLCDVLQAYI RIQHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS NCOA1_HUMAN UNP 2 686 Q15788 RHKILHRLLQEGSPS 156 453 2HCD 156 453 Q9PTN2 A 1 5 302 686 700 2HCD 686 700 Q15788 B 2 1 15 1 cloning artifact GLY 152 2HCD A Q9PTN2 UNP 1 1 cloning artifact SER 153 2HCD A Q9PTN2 UNP 2 1 cloning artifact HIS 154 2HCD A Q9PTN2 UNP 3 1 cloning artifact MET 155 2HCD A Q9PTN2 UNP 4 3 anti-parallel anti-parallel A PHE 307 A PHE 156 A SER 308 A SER 157 A SER 313 A SER 162 A SER 315 A SER 164 A LYS 322 A LYS 171 A CYS 324 A CYS 173 BINDING SITE FOR RESIDUE BIV A 525 A BIV 525 Software 17 A TYR 175 A TYR 24 17 1_555 A TYR 179 A TYR 28 17 1_555 A LEU 258 A LEU 107 17 1_555 A LEU 261 A LEU 110 17 1_555 A VAL 262 A VAL 111 17 1_555 A SER 265 A SER 114 17 1_555 A MET 300 A MET 149 17 1_555 A ARG 302 A ARG 151 17 1_555 A SER 303 A SER 152 17 1_555 A SER 306 A SER 155 17 1_555 A TRP 314 A TRP 163 17 1_555 A CYS 316 A CYS 165 17 1_555 A HIS 333 A HIS 182 17 1_555 A LEU 337 A LEU 186 17 1_555 A LEU 419 A LEU 268 17 1_555 A HIS 423 A HIS 272 17 1_555 A GLN 426 A GLN 275 17 1_555 179 P 65 2 2