0.010312
0.005953
0.000000
0.000000
0.011907
0.000000
0.000000
0.000000
0.014286
0.00000
0.00000
0.00000
Walter, R.L.
Mekel, M.J.
Evdokimov, A.G.
Pokross, M.E.
Sabat, M.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.000
90.000
120.000
96.977
96.977
69.998
C24 H29 N7 O
431.533
3-{[2-(1H-BENZIMIDAZOL-1-YL)-6-{[2-(DIETHYLAMINO)ETHYL]AMINO}PYRIMIDIN-4-YL]AMINO}-4-METHYLPHENOL
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
O
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
N
6
N
C
Y
7
N
C
Y
8
N
C
N
9
N
N
Y
10
N
C
Y
11
N
N
Y
12
N
C
Y
13
N
C
N
14
N
N
N
15
N
C
N
16
N
C
N
17
N
N
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
C
Y
22
N
N
Y
23
N
C
Y
24
N
N
Y
25
N
C
Y
26
N
C
Y
27
N
C
Y
28
N
N
Y
29
N
C
Y
30
N
C
Y
31
N
C
Y
32
N
C
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
N
N
63
S
C
N
64
N
C
N
65
N
O
N
66
N
C
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
N
N
76
S
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
C
N
81
N
C
N
82
N
N
N
83
N
C
N
84
N
N
N
85
N
N
N
86
N
O
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
N
N
103
S
C
N
104
N
C
N
105
N
O
N
106
N
C
N
107
N
C
N
108
N
O
N
109
N
N
N
110
N
O
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
N
N
120
S
C
N
121
N
C
N
122
N
O
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
N
N
136
R
C
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
S
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
S
C
N
151
N
C
N
152
N
O
N
153
N
C
N
154
N
C
N
155
N
C
N
156
N
O
N
157
N
N
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
O
N
177
N
O
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
N
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
N
N
199
S
C
N
200
N
C
N
201
N
O
N
202
N
C
Y
203
N
C
Y
204
N
N
Y
205
N
C
Y
206
N
C
Y
207
N
N
N
208
N
O
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
O
N
220
N
H
N
221
N
H
N
222
N
N
N
223
S
C
N
224
N
C
N
225
N
O
N
226
S
C
N
227
N
C
N
228
N
C
N
229
N
C
N
230
N
O
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
C
N
272
N
C
N
273
N
C
N
274
N
N
N
275
N
O
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
S
N
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
N
C
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
N
322
N
O
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
N
339
N
C
N
340
N
C
N
341
N
O
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
N
N
366
S
C
N
367
N
C
N
368
N
O
N
369
R
C
N
370
N
O
N
371
N
C
N
372
N
O
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
N
Y
391
N
C
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
N
396
N
O
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
N
420
N
O
N
421
N
O
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
N
438
N
C
N
439
N
C
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
1
N
sing
N
2
N
sing
Y
3
N
doub
Y
4
N
sing
Y
5
N
sing
N
6
N
sing
Y
7
N
doub
N
8
N
sing
N
9
N
sing
Y
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
Y
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
Y
19
N
doub
Y
20
N
sing
Y
21
N
sing
Y
22
N
doub
N
23
N
sing
N
24
N
sing
Y
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
Y
48
N
doub
Y
49
N
sing
Y
50
N
sing
Y
51
N
sing
Y
52
N
sing
Y
53
N
doub
Y
54
N
doub
N
55
N
sing
Y
56
N
sing
Y
57
N
sing
Y
58
N
doub
N
59
N
sing
Y
60
N
doub
N
61
N
sing
Y
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
doub
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
doub
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
Y
204
N
sing
Y
205
N
doub
Y
206
N
doub
N
207
N
sing
Y
208
N
sing
N
209
N
sing
Y
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
Y
312
N
doub
Y
313
N
sing
Y
314
N
sing
N
315
N
sing
Y
316
N
doub
N
317
N
sing
Y
318
N
doub
N
319
N
sing
Y
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
doub
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
doub
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
Y
381
N
doub
Y
382
N
sing
Y
383
N
sing
N
384
N
sing
Y
385
N
doub
Y
386
N
sing
Y
387
N
sing
N
388
N
sing
Y
389
N
sing
Y
390
N
doub
N
391
N
sing
Y
392
N
doub
N
393
N
sing
Y
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
Y
409
N
doub
Y
410
N
sing
Y
411
N
sing
N
412
N
sing
Y
413
N
doub
N
414
N
sing
Y
415
N
doub
N
416
N
sing
Y
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
doub
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
UK
Bioorg.Med.Chem.Lett.
BMCLE8
1127
0960-894X
16
5973
5977
10.1016/j.bmcl.2006.08.132
16997556
The development of 2-benzimidazole substituted pyrimidine based inhibitors of lymphocyte specific kinase (Lck).
2006
10.2210/pdb2hk5/pdb
pdb_00002hk5
100
1
CCD
2005-08-01
MARMOSAIC 300 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
1.000
1.0
4.50
89396
0.177
1.33
2.000
50.000
23300
91.50
3.80
22-ID
APS
1.000
SYNCHROTRON
APS BEAMLINE 22-ID
30970.830
Tyrosine-protein kinase HCK
2.7.10.2
Kinase Domian (Residues 246-513)
1
man
polymer
431.533
3-{[2-(1H-BENZIMIDAZOL-1-YL)-6-{[2-(DIETHYLAMINO)ETHYL]AMINO}PYRIMIDIN-4-YL]AMINO}-4-METHYLPHENOL
1
syn
non-polymer
18.015
water
231
nat
water
p59-HCK/p60-HCK, Hemopoietic cell kinase
no
no
AQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT
KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV
IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEE
LYNIMMRCWKNRPEERPTFEYIQSVLDDFE
AQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT
KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV
IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEE
LYNIMMRCWKNRPEERPTFEYIQSVLDDFE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
HCK
9606
Homo sapiens
562
Escherichia coli
1
3.07
59.89
VAPOR DIFFUSION, HANGING DROP
7.0
0.5-3.0M Ammonium Sulfate or Sodium Formate or 18 - 28% PEG 10K + 0.1M HEPES or Tris, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 288K
288
software
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Database references
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2006-09-05
1
1
2007-10-24
1
2
2011-07-13
1
3
2015-04-15
1
4
2017-10-18
1
5
2024-02-14
1
6
2024-04-03
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.language
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2006-07-03
REL
REL
0.083
2.136
95.20
4.40
0.080
1.486
97.80
4.50
0.136
1.632
98.20
4.50
0.229
1.394
98.60
4.40
0.347
1.180
99.00
4.40
0.449
1.105
99.20
4.30
0.507
1.075
98.20
3.90
0.546
1.104
95.20
3.50
0.573
1.074
91.20
3.10
0.578
0.974
83.10
2.90
0.649
0.930
74.20
2.70
0.754
0.870
66.90
2.40
1BM
3-{[2-(1H-BENZIMIDAZOL-1-YL)-6-{[2-(DIETHYLAMINO)ETHYL]AMINO}PYRIMIDIN-4-YL]AMINO}-4-METHYLPHENOL
HOH
water
Hck internal
other
1BM
300
2
1BM
1BM
499
A
HOH
1
3
HOH
HOH
500
A
HOH
2
3
HOH
HOH
501
A
HOH
3
3
HOH
HOH
502
A
HOH
4
3
HOH
HOH
503
A
HOH
5
3
HOH
HOH
504
A
HOH
6
3
HOH
HOH
505
A
HOH
7
3
HOH
HOH
506
A
HOH
8
3
HOH
HOH
507
A
HOH
9
3
HOH
HOH
508
A
HOH
10
3
HOH
HOH
509
A
HOH
11
3
HOH
HOH
510
A
HOH
12
3
HOH
HOH
511
A
HOH
13
3
HOH
HOH
512
A
HOH
14
3
HOH
HOH
513
A
HOH
15
3
HOH
HOH
514
A
HOH
16
3
HOH
HOH
515
A
HOH
17
3
HOH
HOH
516
A
HOH
18
3
HOH
HOH
517
A
HOH
19
3
HOH
HOH
518
A
HOH
20
3
HOH
HOH
519
A
HOH
21
3
HOH
HOH
520
A
HOH
22
3
HOH
HOH
521
A
HOH
23
3
HOH
HOH
522
A
HOH
24
3
HOH
HOH
523
A
HOH
25
3
HOH
HOH
524
A
HOH
26
3
HOH
HOH
525
A
HOH
27
3
HOH
HOH
526
A
HOH
28
3
HOH
HOH
527
A
HOH
29
3
HOH
HOH
528
A
HOH
30
3
HOH
HOH
529
A
HOH
31
3
HOH
HOH
530
A
HOH
32
3
HOH
HOH
531
A
HOH
33
3
HOH
HOH
532
A
HOH
34
3
HOH
HOH
533
A
HOH
35
3
HOH
HOH
534
A
HOH
36
3
HOH
HOH
535
A
HOH
37
3
HOH
HOH
536
A
HOH
38
3
HOH
HOH
537
A
HOH
39
3
HOH
HOH
538
A
HOH
40
3
HOH
HOH
539
A
HOH
41
3
HOH
HOH
540
A
HOH
42
3
HOH
HOH
541
A
HOH
43
3
HOH
HOH
542
A
HOH
44
3
HOH
HOH
543
A
HOH
45
3
HOH
HOH
544
A
HOH
46
3
HOH
HOH
545
A
HOH
47
3
HOH
HOH
546
A
HOH
48
3
HOH
HOH
547
A
HOH
49
3
HOH
HOH
548
A
HOH
50
3
HOH
HOH
549
A
HOH
51
3
HOH
HOH
550
A
HOH
52
3
HOH
HOH
551
A
HOH
53
3
HOH
HOH
552
A
HOH
54
3
HOH
HOH
553
A
HOH
55
3
HOH
HOH
554
A
HOH
56
3
HOH
HOH
555
A
HOH
57
3
HOH
HOH
556
A
HOH
58
3
HOH
HOH
557
A
HOH
59
3
HOH
HOH
558
A
HOH
60
3
HOH
HOH
559
A
HOH
61
3
HOH
HOH
560
A
HOH
62
3
HOH
HOH
561
A
HOH
63
3
HOH
HOH
562
A
HOH
64
3
HOH
HOH
563
A
HOH
65
3
HOH
HOH
564
A
HOH
66
3
HOH
HOH
565
A
HOH
67
3
HOH
HOH
566
A
HOH
68
3
HOH
HOH
567
A
HOH
69
3
HOH
HOH
568
A
HOH
70
3
HOH
HOH
569
A
HOH
71
3
HOH
HOH
570
A
HOH
72
3
HOH
HOH
571
A
HOH
73
3
HOH
HOH
572
A
HOH
74
3
HOH
HOH
573
A
HOH
75
3
HOH
HOH
574
A
HOH
76
3
HOH
HOH
575
A
HOH
77
3
HOH
HOH
576
A
HOH
78
3
HOH
HOH
577
A
HOH
79
3
HOH
HOH
578
A
HOH
80
3
HOH
HOH
579
A
HOH
81
3
HOH
HOH
580
A
HOH
82
3
HOH
HOH
581
A
HOH
83
3
HOH
HOH
582
A
HOH
84
3
HOH
HOH
583
A
HOH
85
3
HOH
HOH
584
A
HOH
86
3
HOH
HOH
585
A
HOH
87
3
HOH
HOH
586
A
HOH
88
3
HOH
HOH
587
A
HOH
89
3
HOH
HOH
588
A
HOH
90
3
HOH
HOH
589
A
HOH
91
3
HOH
HOH
590
A
HOH
92
3
HOH
HOH
591
A
HOH
93
3
HOH
HOH
592
A
HOH
94
3
HOH
HOH
593
A
HOH
95
3
HOH
HOH
594
A
HOH
96
3
HOH
HOH
595
A
HOH
97
3
HOH
HOH
596
A
HOH
98
3
HOH
HOH
597
A
HOH
99
3
HOH
HOH
598
A
HOH
100
3
HOH
HOH
599
A
HOH
101
3
HOH
HOH
600
A
HOH
102
3
HOH
HOH
601
A
HOH
103
3
HOH
HOH
602
A
HOH
104
3
HOH
HOH
603
A
HOH
105
3
HOH
HOH
604
A
HOH
106
3
HOH
HOH
605
A
HOH
107
3
HOH
HOH
606
A
HOH
108
3
HOH
HOH
607
A
HOH
109
3
HOH
HOH
608
A
HOH
110
3
HOH
HOH
609
A
HOH
111
3
HOH
HOH
610
A
HOH
112
3
HOH
HOH
611
A
HOH
113
3
HOH
HOH
612
A
HOH
114
3
HOH
HOH
613
A
HOH
115
3
HOH
HOH
614
A
HOH
116
3
HOH
HOH
615
A
HOH
117
3
HOH
HOH
616
A
HOH
118
3
HOH
HOH
617
A
HOH
119
3
HOH
HOH
618
A
HOH
120
3
HOH
HOH
619
A
HOH
121
3
HOH
HOH
620
A
HOH
122
3
HOH
HOH
621
A
HOH
123
3
HOH
HOH
622
A
HOH
124
3
HOH
HOH
623
A
HOH
125
3
HOH
HOH
624
A
HOH
126
3
HOH
HOH
625
A
HOH
127
3
HOH
HOH
626
A
HOH
128
3
HOH
HOH
627
A
HOH
129
3
HOH
HOH
628
A
HOH
130
3
HOH
HOH
629
A
HOH
131
3
HOH
HOH
630
A
HOH
132
3
HOH
HOH
631
A
HOH
133
3
HOH
HOH
632
A
HOH
134
3
HOH
HOH
633
A
HOH
135
3
HOH
HOH
634
A
HOH
136
3
HOH
HOH
635
A
HOH
137
3
HOH
HOH
636
A
HOH
138
3
HOH
HOH
637
A
HOH
139
3
HOH
HOH
638
A
HOH
140
3
HOH
HOH
639
A
HOH
141
3
HOH
HOH
640
A
HOH
142
3
HOH
HOH
641
A
HOH
143
3
HOH
HOH
642
A
HOH
144
3
HOH
HOH
643
A
HOH
145
3
HOH
HOH
644
A
HOH
146
3
HOH
HOH
645
A
HOH
147
3
HOH
HOH
646
A
HOH
148
3
HOH
HOH
647
A
HOH
149
3
HOH
HOH
648
A
HOH
150
3
HOH
HOH
649
A
HOH
151
3
HOH
HOH
650
A
HOH
152
3
HOH
HOH
651
A
HOH
153
3
HOH
HOH
652
A
HOH
154
3
HOH
HOH
653
A
HOH
155
3
HOH
HOH
654
A
HOH
156
3
HOH
HOH
655
A
HOH
157
3
HOH
HOH
656
A
HOH
158
3
HOH
HOH
657
A
HOH
159
3
HOH
HOH
658
A
HOH
160
3
HOH
HOH
659
A
HOH
161
3
HOH
HOH
660
A
HOH
162
3
HOH
HOH
661
A
HOH
163
3
HOH
HOH
662
A
HOH
164
3
HOH
HOH
663
A
HOH
165
3
HOH
HOH
664
A
HOH
166
3
HOH
HOH
665
A
HOH
167
3
HOH
HOH
666
A
HOH
168
3
HOH
HOH
667
A
HOH
169
3
HOH
HOH
668
A
HOH
170
3
HOH
HOH
669
A
HOH
171
3
HOH
HOH
670
A
HOH
172
3
HOH
HOH
671
A
HOH
173
3
HOH
HOH
672
A
HOH
174
3
HOH
HOH
673
A
HOH
175
3
HOH
HOH
674
A
HOH
176
3
HOH
HOH
675
A
HOH
177
3
HOH
HOH
676
A
HOH
178
3
HOH
HOH
677
A
HOH
179
3
HOH
HOH
678
A
HOH
180
3
HOH
HOH
679
A
HOH
181
3
HOH
HOH
680
A
HOH
182
3
HOH
HOH
681
A
HOH
183
3
HOH
HOH
682
A
HOH
184
3
HOH
HOH
683
A
HOH
185
3
HOH
HOH
684
A
HOH
186
3
HOH
HOH
685
A
HOH
187
3
HOH
HOH
686
A
HOH
188
3
HOH
HOH
687
A
HOH
189
3
HOH
HOH
688
A
HOH
190
3
HOH
HOH
689
A
HOH
191
3
HOH
HOH
690
A
HOH
192
3
HOH
HOH
691
A
HOH
193
3
HOH
HOH
692
A
HOH
194
3
HOH
HOH
693
A
HOH
195
3
HOH
HOH
694
A
HOH
196
3
HOH
HOH
695
A
HOH
197
3
HOH
HOH
696
A
HOH
198
3
HOH
HOH
697
A
HOH
199
3
HOH
HOH
698
A
HOH
200
3
HOH
HOH
699
A
HOH
201
3
HOH
HOH
700
A
HOH
202
3
HOH
HOH
701
A
HOH
203
3
HOH
HOH
702
A
HOH
204
3
HOH
HOH
703
A
HOH
205
3
HOH
HOH
704
A
HOH
206
3
HOH
HOH
705
A
HOH
207
3
HOH
HOH
706
A
HOH
208
3
HOH
HOH
707
A
HOH
209
3
HOH
HOH
708
A
HOH
210
3
HOH
HOH
709
A
HOH
211
3
HOH
HOH
710
A
HOH
212
3
HOH
HOH
711
A
HOH
213
3
HOH
HOH
712
A
HOH
214
3
HOH
HOH
713
A
HOH
215
3
HOH
HOH
714
A
HOH
216
3
HOH
HOH
715
A
HOH
217
3
HOH
HOH
716
A
HOH
218
3
HOH
HOH
717
A
HOH
219
3
HOH
HOH
718
A
HOH
220
3
HOH
HOH
719
A
HOH
221
3
HOH
HOH
720
A
HOH
222
3
HOH
HOH
721
A
HOH
223
3
HOH
HOH
722
A
HOH
224
3
HOH
HOH
723
A
HOH
225
3
HOH
HOH
724
A
HOH
226
3
HOH
HOH
725
A
HOH
227
3
HOH
HOH
726
A
HOH
228
3
HOH
HOH
727
A
HOH
229
3
HOH
HOH
728
A
HOH
230
3
HOH
HOH
729
A
HOH
231
3
HOH
HOH
730
A
0.404
0.592
0.289
3.000
3.000
84.515
84.515
ALA
229
n
1
ALA
229
A
GLN
230
n
2
GLN
230
A
LYS
231
n
3
LYS
231
A
PRO
232
n
4
PRO
232
A
TRP
233
n
5
TRP
233
A
GLU
234
n
6
GLU
234
A
LYS
235
n
7
LYS
235
A
ASP
236
n
8
ASP
236
A
ALA
237
n
9
ALA
237
A
TRP
238
n
10
TRP
238
A
GLU
239
n
11
GLU
239
A
ILE
240
n
12
ILE
240
A
PRO
241
n
13
PRO
241
A
ARG
242
n
14
ARG
242
A
GLU
243
n
15
GLU
243
A
SER
244
n
16
SER
244
A
LEU
245
n
17
LEU
245
A
LYS
246
n
18
LYS
246
A
LEU
247
n
19
LEU
247
A
GLU
248
n
20
GLU
248
A
LYS
249
n
21
LYS
249
A
LYS
250
n
22
LYS
250
A
LEU
251
n
23
LEU
251
A
GLY
252
n
24
GLY
252
A
ALA
253
n
25
ALA
253
A
GLY
254
n
26
GLY
254
A
GLN
255
n
27
GLN
255
A
PHE
256
n
28
PHE
256
A
GLY
257
n
29
GLY
257
A
GLU
258
n
30
GLU
258
A
VAL
259
n
31
VAL
259
A
TRP
260
n
32
TRP
260
A
MET
261
n
33
MET
261
A
ALA
262
n
34
ALA
262
A
THR
263
n
35
THR
263
A
TYR
264
n
36
TYR
264
A
ASN
265
n
37
ASN
265
A
LYS
266
n
38
LYS
266
A
HIS
267
n
39
HIS
267
A
THR
268
n
40
THR
268
A
LYS
269
n
41
LYS
269
A
VAL
270
n
42
VAL
270
A
ALA
271
n
43
ALA
271
A
VAL
272
n
44
VAL
272
A
LYS
273
n
45
LYS
273
A
THR
274
n
46
THR
274
A
MET
275
n
47
MET
275
A
LYS
276
n
48
LYS
276
A
PRO
277
n
49
PRO
277
A
GLY
278
n
50
GLY
278
A
SER
279
n
51
SER
279
A
MET
280
n
52
MET
280
A
SER
281
n
53
SER
281
A
VAL
282
n
54
VAL
282
A
GLU
283
n
55
GLU
283
A
ALA
284
n
56
ALA
284
A
PHE
285
n
57
PHE
285
A
LEU
286
n
58
LEU
286
A
ALA
287
n
59
ALA
287
A
GLU
288
n
60
GLU
288
A
ALA
289
n
61
ALA
289
A
ASN
290
n
62
ASN
290
A
VAL
291
n
63
VAL
291
A
MET
292
n
64
MET
292
A
LYS
293
n
65
LYS
293
A
THR
294
n
66
THR
294
A
LEU
295
n
67
LEU
295
A
GLN
296
n
68
GLN
296
A
HIS
297
n
69
HIS
297
A
ASP
298
n
70
ASP
298
A
LYS
299
n
71
LYS
299
A
LEU
300
n
72
LEU
300
A
VAL
301
n
73
VAL
301
A
LYS
302
n
74
LYS
302
A
LEU
303
n
75
LEU
303
A
HIS
304
n
76
HIS
304
A
ALA
305
n
77
ALA
305
A
VAL
306
n
78
VAL
306
A
VAL
307
n
79
VAL
307
A
THR
308
n
80
THR
308
A
LYS
309
n
81
LYS
309
A
GLU
310
n
82
GLU
310
A
PRO
311
n
83
PRO
311
A
ILE
312
n
84
ILE
312
A
TYR
313
n
85
TYR
313
A
ILE
314
n
86
ILE
314
A
ILE
315
n
87
ILE
315
A
THR
316
n
88
THR
316
A
GLU
317
n
89
GLU
317
A
PHE
318
n
90
PHE
318
A
MET
319
n
91
MET
319
A
ALA
320
n
92
ALA
320
A
LYS
321
n
93
LYS
321
A
GLY
322
n
94
GLY
322
A
SER
323
n
95
SER
323
A
LEU
324
n
96
LEU
324
A
LEU
325
n
97
LEU
325
A
ASP
326
n
98
ASP
326
A
PHE
327
n
99
PHE
327
A
LEU
328
n
100
LEU
328
A
LYS
329
n
101
LYS
329
A
SER
330
n
102
SER
330
A
ASP
331
n
103
ASP
331
A
GLU
332
n
104
GLU
332
A
GLY
333
n
105
GLY
333
A
SER
334
n
106
SER
334
A
LYS
335
n
107
LYS
335
A
GLN
336
n
108
GLN
336
A
PRO
337
n
109
PRO
337
A
LEU
338
n
110
LEU
338
A
PRO
339
n
111
PRO
339
A
LYS
340
n
112
LYS
340
A
LEU
341
n
113
LEU
341
A
ILE
342
n
114
ILE
342
A
ASP
343
n
115
ASP
343
A
PHE
344
n
116
PHE
344
A
SER
345
n
117
SER
345
A
ALA
346
n
118
ALA
346
A
GLN
347
n
119
GLN
347
A
ILE
348
n
120
ILE
348
A
ALA
349
n
121
ALA
349
A
GLU
350
n
122
GLU
350
A
GLY
351
n
123
GLY
351
A
MET
352
n
124
MET
352
A
ALA
353
n
125
ALA
353
A
PHE
354
n
126
PHE
354
A
ILE
355
n
127
ILE
355
A
GLU
356
n
128
GLU
356
A
GLN
357
n
129
GLN
357
A
ARG
358
n
130
ARG
358
A
ASN
359
n
131
ASN
359
A
TYR
360
n
132
TYR
360
A
ILE
361
n
133
ILE
361
A
HIS
362
n
134
HIS
362
A
ARG
363
n
135
ARG
363
A
ASP
364
n
136
ASP
364
A
LEU
365
n
137
LEU
365
A
ARG
366
n
138
ARG
366
A
ALA
367
n
139
ALA
367
A
ALA
368
n
140
ALA
368
A
ASN
369
n
141
ASN
369
A
ILE
370
n
142
ILE
370
A
LEU
371
n
143
LEU
371
A
VAL
372
n
144
VAL
372
A
SER
373
n
145
SER
373
A
ALA
374
n
146
ALA
374
A
SER
375
n
147
SER
375
A
LEU
376
n
148
LEU
376
A
VAL
377
n
149
VAL
377
A
CYS
378
n
150
CYS
378
A
LYS
379
n
151
LYS
379
A
ILE
380
n
152
ILE
380
A
ALA
381
n
153
ALA
381
A
ASP
382
n
154
ASP
382
A
PHE
383
n
155
PHE
383
A
GLY
384
n
156
GLY
384
A
LEU
385
n
157
LEU
385
A
ALA
386
n
158
ALA
386
A
ARG
387
n
159
ARG
387
A
VAL
388
n
160
VAL
388
A
ILE
389
n
161
ILE
389
A
GLU
390
n
162
GLU
390
A
ASP
391
n
163
ASP
391
A
ASN
392
n
164
ASN
392
A
GLU
393
n
165
GLU
393
A
TYR
394
n
166
TYR
394
A
THR
395
n
167
THR
395
A
ALA
396
n
168
ALA
396
A
ARG
397
n
169
ARG
397
A
GLU
398
n
170
GLU
398
A
GLY
399
n
171
GLY
399
A
ALA
400
n
172
ALA
400
A
LYS
401
n
173
LYS
401
A
PHE
402
n
174
PHE
402
A
PRO
403
n
175
PRO
403
A
ILE
404
n
176
ILE
404
A
LYS
405
n
177
LYS
405
A
TRP
406
n
178
TRP
406
A
THR
407
n
179
THR
407
A
ALA
408
n
180
ALA
408
A
PRO
409
n
181
PRO
409
A
GLU
410
n
182
GLU
410
A
ALA
411
n
183
ALA
411
A
ILE
412
n
184
ILE
412
A
ASN
413
n
185
ASN
413
A
PHE
414
n
186
PHE
414
A
GLY
415
n
187
GLY
415
A
SER
416
n
188
SER
416
A
PHE
417
n
189
PHE
417
A
THR
418
n
190
THR
418
A
ILE
419
n
191
ILE
419
A
LYS
420
n
192
LYS
420
A
SER
421
n
193
SER
421
A
ASP
422
n
194
ASP
422
A
VAL
423
n
195
VAL
423
A
TRP
424
n
196
TRP
424
A
SER
425
n
197
SER
425
A
PHE
426
n
198
PHE
426
A
GLY
427
n
199
GLY
427
A
ILE
428
n
200
ILE
428
A
LEU
429
n
201
LEU
429
A
LEU
430
n
202
LEU
430
A
MET
431
n
203
MET
431
A
GLU
432
n
204
GLU
432
A
ILE
433
n
205
ILE
433
A
VAL
434
n
206
VAL
434
A
THR
435
n
207
THR
435
A
TYR
436
n
208
TYR
436
A
GLY
437
n
209
GLY
437
A
ARG
438
n
210
ARG
438
A
ILE
439
n
211
ILE
439
A
PRO
440
n
212
PRO
440
A
TYR
441
n
213
TYR
441
A
PRO
442
n
214
PRO
442
A
GLY
443
n
215
GLY
443
A
MET
444
n
216
MET
444
A
SER
445
n
217
SER
445
A
ASN
446
n
218
ASN
446
A
PRO
447
n
219
PRO
447
A
GLU
448
n
220
GLU
448
A
VAL
449
n
221
VAL
449
A
ILE
450
n
222
ILE
450
A
ARG
451
n
223
ARG
451
A
ALA
452
n
224
ALA
452
A
LEU
453
n
225
LEU
453
A
GLU
454
n
226
GLU
454
A
ARG
455
n
227
ARG
455
A
GLY
456
n
228
GLY
456
A
TYR
457
n
229
TYR
457
A
ARG
458
n
230
ARG
458
A
MET
459
n
231
MET
459
A
PRO
460
n
232
PRO
460
A
ARG
461
n
233
ARG
461
A
PRO
462
n
234
PRO
462
A
GLU
463
n
235
GLU
463
A
ASN
464
n
236
ASN
464
A
CYS
465
n
237
CYS
465
A
PRO
466
n
238
PRO
466
A
GLU
467
n
239
GLU
467
A
GLU
468
n
240
GLU
468
A
LEU
469
n
241
LEU
469
A
TYR
470
n
242
TYR
470
A
ASN
471
n
243
ASN
471
A
ILE
472
n
244
ILE
472
A
MET
473
n
245
MET
473
A
MET
474
n
246
MET
474
A
ARG
475
n
247
ARG
475
A
CYS
476
n
248
CYS
476
A
TRP
477
n
249
TRP
477
A
LYS
478
n
250
LYS
478
A
ASN
479
n
251
ASN
479
A
ARG
480
n
252
ARG
480
A
PRO
481
n
253
PRO
481
A
GLU
482
n
254
GLU
482
A
GLU
483
n
255
GLU
483
A
ARG
484
n
256
ARG
484
A
PRO
485
n
257
PRO
485
A
THR
486
n
258
THR
486
A
PHE
487
n
259
PHE
487
A
GLU
488
n
260
GLU
488
A
TYR
489
n
261
TYR
489
A
ILE
490
n
262
ILE
490
A
GLN
491
n
263
GLN
491
A
SER
492
n
264
SER
492
A
VAL
493
n
265
VAL
493
A
LEU
494
n
266
LEU
494
A
ASP
495
n
267
ASP
495
A
ASP
496
n
268
ASP
496
A
PHE
497
n
269
PHE
497
A
n
270
498
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
251
A
N
LEU
23
A
O
VAL
259
A
O
VAL
31
A
N
TRP
260
A
N
TRP
32
A
O
VAL
272
A
O
VAL
44
A
N
ALA
271
A
N
ALA
43
A
O
THR
316
A
O
THR
88
A
O
ILE
315
A
O
ILE
87
A
N
ALA
305
A
N
ALA
77
A
N
ILE
361
A
N
ILE
133
A
O
ARG
387
A
O
ARG
159
A
N
LEU
371
A
N
LEU
143
A
O
LYS
379
A
O
LYS
151
A
N
TYR
394
A
N
TYR
166
A
O
PHE
417
A
O
PHE
189
1
A
GLU
498
A
GLU
270
1
Y
1
A
A
O
O
HOH
HOH
500
706
2.01
1
A
A
O
O
PHE
HOH
497
707
2.03
1
A
A
O
O
HOH
HOH
546
682
2.14
1
A
A
CD2
O
HIS
HOH
362
730
2.15
1
8.24
0.90
118.30
126.54
A
A
A
CB
CG
OD2
ASP
ASP
ASP
236
236
236
N
1
6.36
0.90
118.30
124.66
A
A
A
CB
CG
OD2
ASP
ASP
ASP
298
298
298
N
1
6.84
0.90
118.30
125.14
A
A
A
CB
CG
OD2
ASP
ASP
ASP
331
331
331
N
1
5.45
0.90
118.30
123.75
A
A
A
CB
CG
OD2
ASP
ASP
ASP
391
391
391
N
1
A
LYS
266
83.49
-48.08
1
A
ARG
363
77.09
-2.67
1
A
ASP
364
-140.60
41.05
1
A
ARG
366
178.76
163.10
1
A
ALA
381
-125.02
-169.05
1
A
ASP
382
46.01
87.48
1
A
ASN
392
55.69
13.65
1
A
PRO
403
-58.40
107.06
25.187
0.2502
0.1981
0.2014
0.2
2.0
39.9
112
25438
22107
5% random
1
2.0
MOLECULAR REPLACEMENT
Hck internal
Engh & Huber
2.0
39.9
231
2429
32
0
2166
0.015
1.483
0.084
2.000
50.000
2HK5
23300
0
1.0
0.177
1.330
1
4.500
3.800
91.500
0.754
2.00
2.06
1409
0.870
1
2.40
66.90
0.649
2.06
2.13
1561
0.930
1
2.70
74.20
0.578
2.13
2.20
1749
0.974
1
2.90
83.10
0.573
2.20
2.29
1926
1.074
1
3.10
91.20
0.546
2.29
2.39
2014
1.104
1
3.50
95.20
0.507
2.39
2.52
2066
1.075
1
3.90
98.20
0.449
2.52
2.68
2108
1.105
1
4.30
99.20
0.347
2.68
2.88
2100
1.180
1
4.40
99.00
0.229
2.88
3.17
2101
1.394
1
4.40
98.60
0.136
3.17
3.63
2086
1.632
1
4.50
98.20
0.08
3.63
4.58
2091
1.486
1
4.50
97.80
0.083
4.58
50.00
2089
2.136
1
4.40
95.20
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
phasing
Jorge Navaza
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
AMoRE
program
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
data extraction
PDB
sw-help@rcsb.rutgers.edu
April. 3, 2006
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
2.000
data reduction
HKL-2000
Hck Kinase in Complex with Lck targetted Inhibitor PG-1009247
1
N
N
2
N
N
3
N
N
A
PRO
241
A
PRO
13
HELX_P
A
GLU
243
A
GLU
15
5
1
3
A
SER
281
A
SER
53
HELX_P
A
LEU
295
A
LEU
67
1
2
15
A
SER
323
A
SER
95
HELX_P
A
SER
330
A
SER
102
1
3
8
A
GLU
332
A
GLU
104
HELX_P
A
GLN
336
A
GLN
108
5
4
5
A
PRO
337
A
PRO
109
HELX_P
A
ARG
358
A
ARG
130
1
5
22
A
ARG
366
A
ARG
138
HELX_P
A
ALA
368
A
ALA
140
5
6
3
A
PRO
403
A
PRO
175
HELX_P
A
THR
407
A
THR
179
5
7
5
A
ALA
408
A
ALA
180
HELX_P
A
GLY
415
A
GLY
187
1
8
8
A
THR
418
A
THR
190
HELX_P
A
THR
435
A
THR
207
1
9
18
A
SER
445
A
SER
217
HELX_P
A
GLY
456
A
GLY
228
1
10
12
A
PRO
466
A
PRO
238
HELX_P
A
TRP
477
A
TRP
249
1
11
12
A
ARG
480
A
ARG
252
HELX_P
A
ARG
484
A
ARG
256
5
12
5
A
THR
486
A
THR
258
HELX_P
A
ASP
496
A
ASP
268
1
13
11
TRANSFERASE
Hck, Src-family, Kinase Domain, TRANSFERASE
A
GLU
310
A
GLU
82
1
A
PRO
311
A
PRO
83
-14.27
HCK_HUMAN
UNP
1
247
P08631
QKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK
EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI
EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEEL
YNIMMRCWKNRPEERPTFEYIQSVLDDF
247
514
2HK5
230
497
P08631
A
1
2
269
1
expression tag
ALA
229
2HK5
A
P08631
UNP
1
1
expression tag
GLU
498
2HK5
A
P08631
UNP
270
5
2
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
245
A
LEU
17
A
ALA
253
A
ALA
25
A
GLY
257
A
GLY
29
A
TYR
264
A
TYR
36
A
THR
268
A
THR
40
A
MET
275
A
MET
47
A
TYR
313
A
TYR
85
A
GLU
317
A
GLU
89
A
LEU
303
A
LEU
75
A
VAL
307
A
VAL
79
A
TYR
360
A
TYR
132
A
ILE
361
A
ILE
133
A
ARG
387
A
ARG
159
A
VAL
388
A
VAL
160
A
ILE
370
A
ILE
142
A
VAL
372
A
VAL
144
A
CYS
378
A
CYS
150
A
ILE
380
A
ILE
152
A
TYR
394
A
TYR
166
A
THR
395
A
THR
167
A
SER
416
A
SER
188
A
PHE
417
A
PHE
189
BINDING SITE FOR RESIDUE 1BM A 499
A
1BM
499
Software
13
A
ALA
271
A
ALA
43
13
1_555
A
LYS
273
A
LYS
45
13
1_555
A
GLU
288
A
GLU
60
13
1_555
A
ILE
314
A
ILE
86
13
1_555
A
THR
316
A
THR
88
13
1_555
A
PHE
318
A
PHE
90
13
1_555
A
MET
319
A
MET
91
13
1_555
A
GLY
322
A
GLY
94
13
1_555
A
ALA
368
A
ALA
140
13
1_555
A
ASN
369
A
ASN
141
13
1_555
A
LEU
371
A
LEU
143
13
1_555
A
ASP
382
A
ASP
154
13
1_555
A
HOH
533
C
HOH
13
1_555
170
P 65