0.012471
0.000000
0.000000
0.000000
0.010413
0.000000
0.000000
0.000000
0.009505
0.00000
0.00000
0.00000
Colloc'h, N.
Sopkova-de Oliveira Santos, J.
Retailleau, P.
Prange, T.
Abraini, J.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
80.189
96.034
105.212
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C4 H3 N5 O2
153.099
8-AZAXANTHINE
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
N2 O
44.013
NITROUS OXIDE
NITROGEN OXIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
H
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
N
N
29
N
C
N
30
N
N
N
31
N
N
N
32
N
O
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
S
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
O
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
N
N
66
S
C
N
67
N
C
N
68
N
O
N
69
N
C
N
70
N
C
N
71
N
O
N
72
N
O
N
73
N
O
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
Y
81
N
N
Y
82
N
C
N
83
N
O
Y
84
N
N
Y
85
N
C
Y
86
N
C
Y
87
N
C
N
88
N
O
Y
89
N
N
Y
90
N
N
Y
91
N
N
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
N
N
96
R
C
N
97
N
C
N
98
N
O
N
99
N
C
N
100
N
S
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
N
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
N
N
130
S
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
O
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
N
C
N
150
N
C
N
151
N
O
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
N
C
Y
163
N
C
Y
164
N
N
Y
165
N
C
Y
166
N
C
Y
167
N
N
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
S
C
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
N
N
205
S
C
N
206
N
C
N
207
N
O
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
N
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
S
N
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
O
N
272
N
N
N
273
N
N
N
274
N
N
N
275
S
C
N
276
N
C
N
277
N
O
N
278
N
C
Y
279
N
C
Y
280
N
C
Y
281
N
C
Y
282
N
C
Y
283
N
C
Y
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
N
302
N
C
N
303
N
C
N
304
N
O
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
N
N
315
S
C
N
316
N
C
N
317
N
O
N
318
N
C
N
319
N
O
N
320
N
O
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
R
C
N
333
N
O
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
N
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
N
383
N
O
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
S
C
N
398
N
C
N
399
N
O
N
400
N
C
N
401
N
C
N
402
N
C
N
403
N
O
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
Y
76
N
sing
Y
77
N
sing
N
78
N
sing
N
79
N
doub
Y
80
N
sing
Y
81
N
sing
N
82
N
sing
Y
83
N
doub
Y
84
N
sing
Y
85
N
sing
Y
86
N
sing
N
87
N
doub
Y
88
N
doub
Y
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
Y
161
N
sing
Y
162
N
doub
Y
163
N
doub
N
164
N
sing
Y
165
N
sing
N
166
N
sing
Y
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
trip
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
Y
271
N
doub
Y
272
N
sing
Y
273
N
sing
N
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
doub
N
278
N
sing
Y
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
doub
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
Y
340
N
doub
Y
341
N
sing
Y
342
N
sing
N
343
N
sing
Y
344
N
doub
Y
345
N
sing
Y
346
N
sing
N
347
N
sing
Y
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
doub
N
375
N
sing
Y
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
US
Biophys.J.
BIOJAU
0030
0006-3495
92
217
224
10.1529/biophysj.106.093807
17028130
Protein Crystallography under Xenon and Nitrous Oxide Pressure: Comparison with In Vivo Pharmacology Studies and Implications for the Mechanism of Inhaled Anesthetic Action
2007
10.2210/pdb2icq/pdb
pdb_00002icq
277
1
IMAGE PLATE
2002-12-10
MARRESEARCH
SI 111
SINGLE WAVELENGTH
M
x-ray
1
0.964
1.0
DW32
LURE
0.964
SYNCHROTRON
LURE BEAMLINE DW32
34183.590
Uricase
1.7.3.3
1
nat
polymer
153.099
8-AZAXANTHINE
1
syn
non-polymer
121.158
CYSTEINE
1
syn
non-polymer
44.013
NITROUS OXIDE
2
syn
non-polymer
18.015
water
198
nat
water
Urate oxidase
no
yes
(ACE)SAVKAARYGKDNVRVYKVHKDEKTGVQTVYEMTVCVLLEGEIETSYTKADNSVIVATDSIKNTIYITAKQNPVTP
PELFGSILGTHFIEKYNHIHAAHVNIVCHRWTRMDIDGKPHPHSFIRDSEEKRNVQVDVVEGKGIDIKSSLSGLTVLKST
NSQFWGFLRDEYTTLKETWDRILSTDVDATWQWKNFSGLQEVRSHVPKFDATWATAREVTLKTFAEDNSASVQATMYKMA
EQILARQQLIETVEYSLPNKHYFEIDLSWHKGLQNTGKNAEVFAPQSDPNGLIKCTVGRSSLKSKL
XSAVKAARYGKDNVRVYKVHKDEKTGVQTVYEMTVCVLLEGEIETSYTKADNSVIVATDSIKNTIYITAKQNPVTPPELF
GSILGTHFIEKYNHIHAAHVNIVCHRWTRMDIDGKPHPHSFIRDSEEKRNVQVDVVEGKGIDIKSSLSGLTVLKSTNSQF
WGFLRDEYTTLKETWDRILSTDVDATWQWKNFSGLQEVRSHVPKFDATWATAREVTLKTFAEDNSASVQATMYKMAEQIL
ARQQLIETVEYSLPNKHYFEIDLSWHKGLQNTGKNAEVFAPQSDPNGLIKCTVGRSSLKSKL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Aspergillus
sample
5059
Aspergillus flavus
1
2.96
58.47
VAPOR DIFFUSION, SITTING DROP
10.5
urate oxidase 8.5mg/ml, sodium carbonate 10mM, 8-azaxanthin 0.2mg/ml, PEG 8000 7%
, pH 10.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
struct_conn
struct_conn_type
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
Derived calculations
1
0
2007-02-13
1
1
2008-05-01
1
2
2011-07-13
1
3
2017-10-18
1
4
2023-10-25
1
5
2023-11-15
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
NATIVE STRUCTURE
WITH 2.0 MPA PRESSURE OF XENON
RCSB
Y
PDBJ
2006-09-13
REL
REL
AZA
8-AZAXANTHINE
CYS
CYSTEINE
N2O
NITROUS OXIDE
HOH
water
2IBA
PDB ENTRY 2IBA
PDB
experimental model
AZA
300
2
AZA
AZA
302
A
FCY
660
3
CYS
CYS
660
A
N2O
600
4
N2O
N2O
600
A
N2O
601
4
N2O
N2O
601
A
HOH
301
5
HOH
HOH
661
A
HOH
302
5
HOH
HOH
662
A
HOH
303
5
HOH
HOH
663
A
HOH
304
5
HOH
HOH
664
A
HOH
305
5
HOH
HOH
665
A
HOH
306
5
HOH
HOH
666
A
HOH
307
5
HOH
HOH
667
A
HOH
308
5
HOH
HOH
668
A
HOH
309
5
HOH
HOH
669
A
HOH
310
5
HOH
HOH
670
A
HOH
311
5
HOH
HOH
671
A
HOH
312
5
HOH
HOH
672
A
HOH
313
5
HOH
HOH
673
A
HOH
314
5
HOH
HOH
674
A
HOH
315
5
HOH
HOH
675
A
HOH
316
5
HOH
HOH
676
A
HOH
317
5
HOH
HOH
677
A
HOH
318
5
HOH
HOH
678
A
HOH
319
5
HOH
HOH
679
A
HOH
320
5
HOH
HOH
680
A
HOH
321
5
HOH
HOH
681
A
HOH
322
5
HOH
HOH
682
A
HOH
323
5
HOH
HOH
683
A
HOH
324
5
HOH
HOH
684
A
HOH
325
5
HOH
HOH
685
A
HOH
326
5
HOH
HOH
686
A
HOH
327
5
HOH
HOH
687
A
HOH
328
5
HOH
HOH
688
A
HOH
329
5
HOH
HOH
689
A
HOH
330
5
HOH
HOH
690
A
HOH
331
5
HOH
HOH
691
A
HOH
332
5
HOH
HOH
692
A
HOH
333
5
HOH
HOH
693
A
HOH
334
5
HOH
HOH
694
A
HOH
335
5
HOH
HOH
695
A
HOH
336
5
HOH
HOH
696
A
HOH
337
5
HOH
HOH
697
A
HOH
338
5
HOH
HOH
698
A
HOH
339
5
HOH
HOH
699
A
HOH
340
5
HOH
HOH
700
A
HOH
341
5
HOH
HOH
701
A
HOH
342
5
HOH
HOH
702
A
HOH
343
5
HOH
HOH
703
A
HOH
344
5
HOH
HOH
704
A
HOH
345
5
HOH
HOH
705
A
HOH
346
5
HOH
HOH
706
A
HOH
347
5
HOH
HOH
707
A
HOH
348
5
HOH
HOH
708
A
HOH
349
5
HOH
HOH
709
A
HOH
350
5
HOH
HOH
710
A
HOH
351
5
HOH
HOH
711
A
HOH
352
5
HOH
HOH
712
A
HOH
353
5
HOH
HOH
713
A
HOH
354
5
HOH
HOH
714
A
HOH
355
5
HOH
HOH
715
A
HOH
356
5
HOH
HOH
716
A
HOH
357
5
HOH
HOH
717
A
HOH
358
5
HOH
HOH
718
A
HOH
359
5
HOH
HOH
719
A
HOH
360
5
HOH
HOH
720
A
HOH
361
5
HOH
HOH
721
A
HOH
362
5
HOH
HOH
722
A
HOH
363
5
HOH
HOH
723
A
HOH
364
5
HOH
HOH
724
A
HOH
365
5
HOH
HOH
725
A
HOH
366
5
HOH
HOH
726
A
HOH
367
5
HOH
HOH
727
A
HOH
368
5
HOH
HOH
728
A
HOH
369
5
HOH
HOH
729
A
HOH
370
5
HOH
HOH
730
A
HOH
371
5
HOH
HOH
731
A
HOH
372
5
HOH
HOH
732
A
HOH
373
5
HOH
HOH
733
A
HOH
374
5
HOH
HOH
734
A
HOH
375
5
HOH
HOH
735
A
HOH
376
5
HOH
HOH
736
A
HOH
377
5
HOH
HOH
737
A
HOH
378
5
HOH
HOH
738
A
HOH
379
5
HOH
HOH
739
A
HOH
380
5
HOH
HOH
740
A
HOH
381
5
HOH
HOH
741
A
HOH
382
5
HOH
HOH
742
A
HOH
383
5
HOH
HOH
743
A
HOH
384
5
HOH
HOH
744
A
HOH
385
5
HOH
HOH
745
A
HOH
386
5
HOH
HOH
746
A
HOH
387
5
HOH
HOH
747
A
HOH
388
5
HOH
HOH
748
A
HOH
389
5
HOH
HOH
749
A
HOH
390
5
HOH
HOH
750
A
HOH
391
5
HOH
HOH
751
A
HOH
392
5
HOH
HOH
752
A
HOH
393
5
HOH
HOH
753
A
HOH
394
5
HOH
HOH
754
A
HOH
395
5
HOH
HOH
755
A
HOH
396
5
HOH
HOH
756
A
HOH
397
5
HOH
HOH
757
A
HOH
398
5
HOH
HOH
758
A
HOH
399
5
HOH
HOH
759
A
HOH
400
5
HOH
HOH
760
A
HOH
401
5
HOH
HOH
761
A
HOH
402
5
HOH
HOH
762
A
HOH
403
5
HOH
HOH
763
A
HOH
404
5
HOH
HOH
764
A
HOH
405
5
HOH
HOH
765
A
HOH
406
5
HOH
HOH
766
A
HOH
407
5
HOH
HOH
767
A
HOH
408
5
HOH
HOH
768
A
HOH
409
5
HOH
HOH
769
A
HOH
410
5
HOH
HOH
770
A
HOH
411
5
HOH
HOH
771
A
HOH
412
5
HOH
HOH
772
A
HOH
413
5
HOH
HOH
773
A
HOH
414
5
HOH
HOH
774
A
HOH
415
5
HOH
HOH
775
A
HOH
416
5
HOH
HOH
776
A
HOH
418
5
HOH
HOH
777
A
HOH
419
5
HOH
HOH
778
A
HOH
420
5
HOH
HOH
779
A
HOH
421
5
HOH
HOH
780
A
HOH
422
5
HOH
HOH
781
A
HOH
423
5
HOH
HOH
782
A
HOH
424
5
HOH
HOH
783
A
HOH
425
5
HOH
HOH
784
A
HOH
426
5
HOH
HOH
785
A
HOH
427
5
HOH
HOH
786
A
HOH
428
5
HOH
HOH
787
A
HOH
429
5
HOH
HOH
788
A
HOH
430
5
HOH
HOH
789
A
HOH
431
5
HOH
HOH
790
A
HOH
432
5
HOH
HOH
791
A
HOH
433
5
HOH
HOH
792
A
HOH
434
5
HOH
HOH
793
A
HOH
435
5
HOH
HOH
794
A
HOH
436
5
HOH
HOH
795
A
HOH
437
5
HOH
HOH
796
A
HOH
438
5
HOH
HOH
797
A
HOH
439
5
HOH
HOH
798
A
HOH
440
5
HOH
HOH
799
A
HOH
441
5
HOH
HOH
800
A
HOH
442
5
HOH
HOH
801
A
HOH
443
5
HOH
HOH
802
A
HOH
444
5
HOH
HOH
803
A
HOH
445
5
HOH
HOH
804
A
HOH
446
5
HOH
HOH
805
A
HOH
447
5
HOH
HOH
806
A
HOH
449
5
HOH
HOH
807
A
HOH
450
5
HOH
HOH
808
A
HOH
451
5
HOH
HOH
809
A
HOH
453
5
HOH
HOH
810
A
HOH
454
5
HOH
HOH
811
A
HOH
455
5
HOH
HOH
812
A
HOH
456
5
HOH
HOH
813
A
HOH
457
5
HOH
HOH
814
A
HOH
459
5
HOH
HOH
815
A
HOH
460
5
HOH
HOH
816
A
HOH
465
5
HOH
HOH
817
A
HOH
466
5
HOH
HOH
818
A
HOH
467
5
HOH
HOH
819
A
HOH
468
5
HOH
HOH
820
A
HOH
470
5
HOH
HOH
821
A
HOH
474
5
HOH
HOH
822
A
HOH
476
5
HOH
HOH
823
A
HOH
478
5
HOH
HOH
824
A
HOH
479
5
HOH
HOH
825
A
HOH
480
5
HOH
HOH
826
A
HOH
481
5
HOH
HOH
827
A
HOH
483
5
HOH
HOH
828
A
HOH
484
5
HOH
HOH
829
A
HOH
487
5
HOH
HOH
830
A
HOH
488
5
HOH
HOH
831
A
HOH
490
5
HOH
HOH
832
A
HOH
491
5
HOH
HOH
833
A
HOH
493
5
HOH
HOH
834
A
HOH
494
5
HOH
HOH
835
A
HOH
496
5
HOH
HOH
836
A
HOH
499
5
HOH
HOH
837
A
HOH
500
5
HOH
HOH
838
A
HOH
501
5
HOH
HOH
839
A
HOH
502
5
HOH
HOH
840
A
HOH
503
5
HOH
HOH
841
A
HOH
504
5
HOH
HOH
842
A
HOH
505
5
HOH
HOH
843
A
HOH
506
5
HOH
HOH
844
A
HOH
507
5
HOH
HOH
845
A
HOH
510
5
HOH
HOH
846
A
HOH
511
5
HOH
HOH
847
A
HOH
512
5
HOH
HOH
848
A
HOH
514
5
HOH
HOH
849
A
HOH
516
5
HOH
HOH
850
A
HOH
517
5
HOH
HOH
851
A
HOH
518
5
HOH
HOH
852
A
HOH
523
5
HOH
HOH
853
A
HOH
532
5
HOH
HOH
854
A
HOH
534
5
HOH
HOH
855
A
HOH
536
5
HOH
HOH
856
A
HOH
549
5
HOH
HOH
857
A
HOH
550
5
HOH
HOH
858
A
ACE
0
n
1
ACE
0
A
SER
1
n
2
SER
1
A
ALA
2
n
3
ALA
2
A
VAL
3
n
4
VAL
3
A
LYS
4
n
5
LYS
4
A
ALA
5
n
6
ALA
5
A
ALA
6
n
7
ALA
6
A
ARG
7
n
8
ARG
7
A
TYR
8
n
9
TYR
8
A
GLY
9
n
10
GLY
9
A
LYS
10
n
11
LYS
10
A
ASP
11
n
12
ASP
11
A
ASN
12
n
13
ASN
12
A
VAL
13
n
14
VAL
13
A
ARG
14
n
15
ARG
14
A
VAL
15
n
16
VAL
15
A
TYR
16
n
17
TYR
16
A
LYS
17
n
18
LYS
17
A
VAL
18
n
19
VAL
18
A
HIS
19
n
20
HIS
19
A
LYS
20
n
21
LYS
20
A
ASP
21
n
22
ASP
21
A
GLU
22
n
23
GLU
22
A
LYS
23
n
24
LYS
23
A
THR
24
n
25
THR
24
A
GLY
25
n
26
GLY
25
A
VAL
26
n
27
VAL
26
A
GLN
27
n
28
GLN
27
A
THR
28
n
29
THR
28
A
VAL
29
n
30
VAL
29
A
TYR
30
n
31
TYR
30
A
GLU
31
n
32
GLU
31
A
MET
32
n
33
MET
32
A
THR
33
n
34
THR
33
A
VAL
34
n
35
VAL
34
A
CYS
35
n
36
CYS
35
A
VAL
36
n
37
VAL
36
A
LEU
37
n
38
LEU
37
A
LEU
38
n
39
LEU
38
A
GLU
39
n
40
GLU
39
A
GLY
40
n
41
GLY
40
A
GLU
41
n
42
GLU
41
A
ILE
42
n
43
ILE
42
A
GLU
43
n
44
GLU
43
A
THR
44
n
45
THR
44
A
SER
45
n
46
SER
45
A
TYR
46
n
47
TYR
46
A
THR
47
n
48
THR
47
A
LYS
48
n
49
LYS
48
A
ALA
49
n
50
ALA
49
A
ASP
50
n
51
ASP
50
A
ASN
51
n
52
ASN
51
A
SER
52
n
53
SER
52
A
VAL
53
n
54
VAL
53
A
ILE
54
n
55
ILE
54
A
VAL
55
n
56
VAL
55
A
ALA
56
n
57
ALA
56
A
THR
57
n
58
THR
57
A
ASP
58
n
59
ASP
58
A
SER
59
n
60
SER
59
A
ILE
60
n
61
ILE
60
A
LYS
61
n
62
LYS
61
A
ASN
62
n
63
ASN
62
A
THR
63
n
64
THR
63
A
ILE
64
n
65
ILE
64
A
TYR
65
n
66
TYR
65
A
ILE
66
n
67
ILE
66
A
THR
67
n
68
THR
67
A
ALA
68
n
69
ALA
68
A
LYS
69
n
70
LYS
69
A
GLN
70
n
71
GLN
70
A
ASN
71
n
72
ASN
71
A
PRO
72
n
73
PRO
72
A
VAL
73
n
74
VAL
73
A
THR
74
n
75
THR
74
A
PRO
75
n
76
PRO
75
A
PRO
76
n
77
PRO
76
A
GLU
77
n
78
GLU
77
A
LEU
78
n
79
LEU
78
A
PHE
79
n
80
PHE
79
A
GLY
80
n
81
GLY
80
A
SER
81
n
82
SER
81
A
ILE
82
n
83
ILE
82
A
LEU
83
n
84
LEU
83
A
GLY
84
n
85
GLY
84
A
THR
85
n
86
THR
85
A
HIS
86
n
87
HIS
86
A
PHE
87
n
88
PHE
87
A
ILE
88
n
89
ILE
88
A
GLU
89
n
90
GLU
89
A
LYS
90
n
91
LYS
90
A
TYR
91
n
92
TYR
91
A
ASN
92
n
93
ASN
92
A
HIS
93
n
94
HIS
93
A
ILE
94
n
95
ILE
94
A
HIS
95
n
96
HIS
95
A
ALA
96
n
97
ALA
96
A
ALA
97
n
98
ALA
97
A
HIS
98
n
99
HIS
98
A
VAL
99
n
100
VAL
99
A
ASN
100
n
101
ASN
100
A
ILE
101
n
102
ILE
101
A
VAL
102
n
103
VAL
102
A
CYS
103
n
104
CYS
103
A
HIS
104
n
105
HIS
104
A
ARG
105
n
106
ARG
105
A
TRP
106
n
107
TRP
106
A
THR
107
n
108
THR
107
A
ARG
108
n
109
ARG
108
A
MET
109
n
110
MET
109
A
ASP
110
n
111
ASP
110
A
ILE
111
n
112
ILE
111
A
ASP
112
n
113
ASP
112
A
GLY
113
n
114
GLY
113
A
LYS
114
n
115
LYS
114
A
PRO
115
n
116
PRO
115
A
HIS
116
n
117
HIS
116
A
PRO
117
n
118
PRO
117
A
HIS
118
n
119
HIS
118
A
SER
119
n
120
SER
119
A
PHE
120
n
121
PHE
120
A
ILE
121
n
122
ILE
121
A
ARG
122
n
123
ARG
122
A
ASP
123
n
124
ASP
123
A
SER
124
n
125
SER
124
A
GLU
125
n
126
GLU
125
A
GLU
126
n
127
GLU
126
A
LYS
127
n
128
LYS
127
A
ARG
128
n
129
ARG
128
A
ASN
129
n
130
ASN
129
A
VAL
130
n
131
VAL
130
A
GLN
131
n
132
GLN
131
A
VAL
132
n
133
VAL
132
A
ASP
133
n
134
ASP
133
A
VAL
134
n
135
VAL
134
A
VAL
135
n
136
VAL
135
A
GLU
136
n
137
GLU
136
A
GLY
137
n
138
GLY
137
A
LYS
138
n
139
LYS
138
A
GLY
139
n
140
GLY
139
A
ILE
140
n
141
ILE
140
A
ASP
141
n
142
ASP
141
A
ILE
142
n
143
ILE
142
A
LYS
143
n
144
LYS
143
A
SER
144
n
145
SER
144
A
SER
145
n
146
SER
145
A
LEU
146
n
147
LEU
146
A
SER
147
n
148
SER
147
A
GLY
148
n
149
GLY
148
A
LEU
149
n
150
LEU
149
A
THR
150
n
151
THR
150
A
VAL
151
n
152
VAL
151
A
LEU
152
n
153
LEU
152
A
LYS
153
n
154
LYS
153
A
SER
154
n
155
SER
154
A
THR
155
n
156
THR
155
A
ASN
156
n
157
ASN
156
A
SER
157
n
158
SER
157
A
GLN
158
n
159
GLN
158
A
PHE
159
n
160
PHE
159
A
TRP
160
n
161
TRP
160
A
GLY
161
n
162
GLY
161
A
PHE
162
n
163
PHE
162
A
LEU
163
n
164
LEU
163
A
ARG
164
n
165
ARG
164
A
ASP
165
n
166
ASP
165
A
GLU
166
n
167
GLU
166
A
TYR
167
n
168
TYR
167
A
THR
168
n
169
THR
168
A
THR
169
n
170
THR
169
A
LEU
170
n
171
LEU
170
A
LYS
171
n
172
LYS
171
A
GLU
172
n
173
GLU
172
A
THR
173
n
174
THR
173
A
TRP
174
n
175
TRP
174
A
ASP
175
n
176
ASP
175
A
ARG
176
n
177
ARG
176
A
ILE
177
n
178
ILE
177
A
LEU
178
n
179
LEU
178
A
SER
179
n
180
SER
179
A
THR
180
n
181
THR
180
A
ASP
181
n
182
ASP
181
A
VAL
182
n
183
VAL
182
A
ASP
183
n
184
ASP
183
A
ALA
184
n
185
ALA
184
A
THR
185
n
186
THR
185
A
TRP
186
n
187
TRP
186
A
GLN
187
n
188
GLN
187
A
TRP
188
n
189
TRP
188
A
LYS
189
n
190
LYS
189
A
ASN
190
n
191
ASN
190
A
PHE
191
n
192
PHE
191
A
SER
192
n
193
SER
192
A
GLY
193
n
194
GLY
193
A
LEU
194
n
195
LEU
194
A
GLN
195
n
196
GLN
195
A
GLU
196
n
197
GLU
196
A
VAL
197
n
198
VAL
197
A
ARG
198
n
199
ARG
198
A
SER
199
n
200
SER
199
A
HIS
200
n
201
HIS
200
A
VAL
201
n
202
VAL
201
A
PRO
202
n
203
PRO
202
A
LYS
203
n
204
LYS
203
A
PHE
204
n
205
PHE
204
A
ASP
205
n
206
ASP
205
A
ALA
206
n
207
ALA
206
A
THR
207
n
208
THR
207
A
TRP
208
n
209
TRP
208
A
ALA
209
n
210
ALA
209
A
THR
210
n
211
THR
210
A
ALA
211
n
212
ALA
211
A
ARG
212
n
213
ARG
212
A
GLU
213
n
214
GLU
213
A
VAL
214
n
215
VAL
214
A
THR
215
n
216
THR
215
A
LEU
216
n
217
LEU
216
A
LYS
217
n
218
LYS
217
A
THR
218
n
219
THR
218
A
PHE
219
n
220
PHE
219
A
ALA
220
n
221
ALA
220
A
GLU
221
n
222
GLU
221
A
ASP
222
n
223
ASP
222
A
ASN
223
n
224
ASN
223
A
SER
224
n
225
SER
224
A
ALA
225
n
226
ALA
225
A
SER
226
n
227
SER
226
A
VAL
227
n
228
VAL
227
A
GLN
228
n
229
GLN
228
A
ALA
229
n
230
ALA
229
A
THR
230
n
231
THR
230
A
MET
231
n
232
MET
231
A
TYR
232
n
233
TYR
232
A
LYS
233
n
234
LYS
233
A
MET
234
n
235
MET
234
A
ALA
235
n
236
ALA
235
A
GLU
236
n
237
GLU
236
A
GLN
237
n
238
GLN
237
A
ILE
238
n
239
ILE
238
A
LEU
239
n
240
LEU
239
A
ALA
240
n
241
ALA
240
A
ARG
241
n
242
ARG
241
A
GLN
242
n
243
GLN
242
A
GLN
243
n
244
GLN
243
A
LEU
244
n
245
LEU
244
A
ILE
245
n
246
ILE
245
A
GLU
246
n
247
GLU
246
A
THR
247
n
248
THR
247
A
VAL
248
n
249
VAL
248
A
GLU
249
n
250
GLU
249
A
TYR
250
n
251
TYR
250
A
SER
251
n
252
SER
251
A
LEU
252
n
253
LEU
252
A
PRO
253
n
254
PRO
253
A
ASN
254
n
255
ASN
254
A
LYS
255
n
256
LYS
255
A
HIS
256
n
257
HIS
256
A
TYR
257
n
258
TYR
257
A
PHE
258
n
259
PHE
258
A
GLU
259
n
260
GLU
259
A
ILE
260
n
261
ILE
260
A
ASP
261
n
262
ASP
261
A
LEU
262
n
263
LEU
262
A
SER
263
n
264
SER
263
A
TRP
264
n
265
TRP
264
A
HIS
265
n
266
HIS
265
A
LYS
266
n
267
LYS
266
A
GLY
267
n
268
GLY
267
A
LEU
268
n
269
LEU
268
A
GLN
269
n
270
GLN
269
A
ASN
270
n
271
ASN
270
A
THR
271
n
272
THR
271
A
GLY
272
n
273
GLY
272
A
LYS
273
n
274
LYS
273
A
ASN
274
n
275
ASN
274
A
ALA
275
n
276
ALA
275
A
GLU
276
n
277
GLU
276
A
VAL
277
n
278
VAL
277
A
PHE
278
n
279
PHE
278
A
ALA
279
n
280
ALA
279
A
PRO
280
n
281
PRO
280
A
GLN
281
n
282
GLN
281
A
SER
282
n
283
SER
282
A
ASP
283
n
284
ASP
283
A
PRO
284
n
285
PRO
284
A
ASN
285
n
286
ASN
285
A
GLY
286
n
287
GLY
286
A
LEU
287
n
288
LEU
287
A
ILE
288
n
289
ILE
288
A
LYS
289
n
290
LYS
289
A
CYS
290
n
291
CYS
290
A
THR
291
n
292
THR
291
A
VAL
292
n
293
VAL
292
A
GLY
293
n
294
GLY
293
A
ARG
294
n
295
ARG
294
A
SER
295
n
296
SER
295
A
n
297
296
A
n
298
297
A
n
299
298
A
n
300
299
A
n
301
300
A
n
302
301
A
author_and_software_defined_assembly
PISA,PQS
4
tetrameric
26920
-105
43730
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-x+1,-y+1,z
crystal symmetry operation
80.1890000000
96.0340000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_656
-x+1,y,-z+1
crystal symmetry operation
80.1890000000
0.0000000000
105.2120000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_566
x,-y+1,-z+1
crystal symmetry operation
0.0000000000
96.0340000000
105.2120000000
A
N
TYR
8
A
N
TYR
9
A
O
LEU
38
A
O
LEU
39
A
N
LEU
37
A
N
LEU
38
A
O
HIS
98
A
O
HIS
99
A
N
CYS
103
A
N
CYS
104
A
O
ARG
128
A
O
ARG
129
A
N
ASP
133
A
N
ASP
134
A
O
ASP
141
A
O
ASP
142
A
N
LEU
149
A
N
LEU
150
A
O
VAL
182
A
O
VAL
183
A
N
GLN
187
A
N
GLN
188
A
O
GLU
246
A
O
GLU
247
A
N
VAL
248
A
N
VAL
249
A
O
VAL
292
A
O
VAL
293
A
N
MET
109
A
N
MET
110
A
O
HIS
116
A
O
HIS
117
A
N
PHE
258
A
N
PHE
259
A
O
ALA
279
A
O
ALA
280
1
A
OXT
CYS
660
C
OXT
CYS
1
1
N
1
A
SER
296
A
SER
297
1
Y
1
A
LEU
297
A
LEU
298
1
Y
1
A
LYS
298
A
LYS
299
1
Y
1
A
SER
299
A
SER
300
1
Y
1
A
LYS
300
A
LYS
301
1
Y
1
A
LEU
301
A
LEU
302
1
Y
1
7.34
1.10
114.20
121.54
A
A
A
CA
CB
SG
CYS
CYS
CYS
290
290
290
A
N
1
A
A
CB
SG
CYS
CYS
290
290
-0.102
0.016
1.812
1.710
B
N
1
A
A
O
O
ASP
ASP
123
123
1.62
1_555
4_566
1
A
HIS
118
-151.88
25.34
1
A
ASP
175
-160.71
107.52
1
A
SER
226
177.11
165.55
1
A
ASN
270
-140.05
20.94
21.030
0.000
0.000
0.000
0.000
0.000
0.000
0.969
0.958
0.18779
0.16528
0.16642
1.750
14.770
2074
39086
5.000
99.940
1.727
0.056
RANDOM
1
THROUGHOUT
0.00
RIGID BODY
0.088
0.086
0.800
0.800
1.200
PDB ENTRY 2IBA
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.750
14.770
198
2583
23
0
2362
0.012
0.022
2448
1.476
1.933
3317
5.954
5.000
294
37.143
24.474
114
13.338
15.000
427
8.033
15.000
12
0.104
0.200
370
0.006
0.020
1827
0.202
0.200
925
0.311
0.200
1675
0.124
0.200
146
0.207
0.200
102
0.148
0.200
38
0.976
1.500
1508
1.678
2.000
2403
2.555
3.000
1079
4.239
4.500
914
0.22
0.214
1.795
145
2799
2944
20
99.760
18.9
1.750
99.000
2ICQ
41239
1
1
0.055
1.050
1
13.300
99.900
0.346
1.75
1.81
4076
0.860
1
99.80
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
data extraction
PDB
sw-help@rcsb.rutgers.edu
April. 3, 2006
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
2.000
data collection
MAR345
345DTB
urate oxidase under 2.0 MPa pressure of nitrous oxide
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
Functionnal homo-tetramer generated by the I222 symmetry
A
ILE
42
A
ILE
43
HELX_P
A
LYS
48
A
LYS
49
1
1
7
A
ASP
50
A
ASP
51
HELX_P
A
ILE
54
A
ILE
55
5
2
5
A
ALA
56
A
ALA
57
HELX_P
A
ASN
71
A
ASN
72
1
3
16
A
PRO
75
A
PRO
76
HELX_P
A
TYR
91
A
TYR
92
1
4
17
A
GLY
193
A
GLY
194
HELX_P
A
HIS
200
A
HIS
201
1
5
8
A
HIS
200
A
HIS
201
HELX_P
A
ASP
222
A
ASP
223
1
6
23
A
SER
226
A
SER
227
HELX_P
A
GLN
242
A
GLN
243
1
7
17
A
THR
271
A
THR
272
HELX_P
A
ALA
275
A
ALA
276
5
8
5
disulf
2.017
none
A
CYS
35
A
SG
CYS
36
1_555
A
CYS
660
C
SG
CYS
1_555
covale
1.333
both
A
ACE
0
A
C
ACE
1
1_555
A
SER
1
A
N
SER
2
1_555
OXIDOREDUCTASE
uric acid degradation, T-fold domain, GAZ-protein complex, OXIDOREDUCTASE
A
THR
74
A
THR
75
1
A
PRO
75
A
PRO
76
-8.11
A
ASP
283
A
ASP
284
1
A
PRO
284
A
PRO
285
-9.59
URIC_ASPFL
UNP
1
1
Q00511
SAVKAARYGKDNVRVYKVHKDEKTGVQTVYEMTVCVLLEGEIETSYTKADNSVIVATDSIKNTIYITAKQNPVTPPELFG
SILGTHFIEKYNHIHAAHVNIVCHRWTRMDIDGKPHPHSFIRDSEEKRNVQVDVVEGKGIDIKSSLSGLTVLKSTNSQFW
GFLRDEYTTLKETWDRILSTDVDATWQWKNFSGLQEVRSHVPKFDATWATAREVTLKTFAEDNSASVQATMYKMAEQILA
RQQLIETVEYSLPNKHYFEIDLSWHKGLQNTGKNAEVFAPQSDPNGLIKCTVGRSSLKSKL
1
301
2ICQ
1
301
Q00511
A
1
2
302
8
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
8
A
TYR
9
A
LYS
20
A
LYS
21
A
GLN
27
A
GLN
28
A
GLY
40
A
GLY
41
A
ILE
94
A
ILE
95
A
HIS
104
A
HIS
105
A
LYS
127
A
LYS
128
A
VAL
135
A
VAL
136
A
GLY
139
A
GLY
140
A
LYS
153
A
LYS
154
A
LEU
178
A
LEU
179
A
TRP
188
A
TRP
189
A
ILE
245
A
ILE
246
A
ASN
254
A
ASN
255
A
GLY
286
A
GLY
287
A
GLY
293
A
GLY
294
A
THR
107
A
THR
108
A
ILE
111
A
ILE
112
A
LYS
114
A
LYS
115
A
ILE
121
A
ILE
122
A
TYR
257
A
TYR
258
A
GLU
259
A
GLU
260
A
PHE
278
A
PHE
279
A
PRO
280
A
PRO
281
BINDING SITE FOR RESIDUE AZA A 302
A
AZA
302
Software
10
BINDING SITE FOR RESIDUE CYS A 660
A
CYS
660
Software
2
BINDING SITE FOR RESIDUE N2O A 600
A
N2O
600
Software
3
BINDING SITE FOR RESIDUE N2O A 601
A
N2O
601
Software
6
A
ILE
54
A
ILE
55
10
2_665
A
ALA
56
A
ALA
57
10
2_665
A
THR
57
A
THR
58
10
2_665
A
PHE
159
A
PHE
160
10
1_555
A
ARG
176
A
ARG
177
10
1_555
A
SER
226
A
SER
227
10
1_555
A
VAL
227
A
VAL
228
10
1_555
A
GLN
228
A
GLN
229
10
1_555
A
ASN
254
A
ASN
255
10
1_555
A
HOH
669
F
HOH
10
1_555
A
CYS
35
A
CYS
36
2
1_555
A
HOH
858
F
HOH
2
2_665
A
LEU
178
A
LEU
179
3
1_555
A
THR
230
A
THR
231
3
1_555
A
LEU
252
A
LEU
253
3
1_555
A
VAL
151
A
VAL
152
6
1_555
A
THR
180
A
THR
181
6
1_555
A
VAL
182
A
VAL
183
6
1_555
A
THR
215
A
THR
216
6
1_555
A
PHE
219
A
PHE
220
6
1_555
A
MET
234
A
MET
235
6
1_555
23
I 2 2 2