0.007946 0.004588 0.000000 0.000000 0.009176 0.000000 0.000000 0.000000 0.008837 0.00000 0.00000 0.00000 Marcotte, L.L. Gohara, D.G. Filman, D.J. Hogle, J.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 125.843 125.843 113.155 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 S C N 163 N C N 164 N C N 165 N C N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 S C N 182 N C N 183 N O N 184 N C N 185 N C N 186 N C N 187 N C N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N N N 203 S C N 204 N C N 205 N O N 206 N C N 207 N C N 208 N C N 209 N C N 210 N N N 211 N O N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 S C N 229 N C N 230 N O N 231 N C N 232 N C N 233 N S N 234 N C N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C Y 252 N C Y 253 N C Y 254 N C Y 255 N C Y 256 N C Y 257 N C N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 N C N 275 N C N 276 N C N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N O N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 R C N 306 N O N 307 N C N 308 N O N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 N C Y 323 N C Y 324 N C Y 325 N C Y 326 N N Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C Y 350 N C Y 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N C N 356 N O N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C N 374 N C N 375 N C N 376 N O N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing Y 246 N doub Y 247 N sing Y 248 N sing N 249 N sing Y 250 N doub N 251 N sing Y 252 N doub N 253 N sing Y 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing Y 315 N doub Y 316 N sing Y 317 N sing N 318 N sing Y 319 N doub Y 320 N sing Y 321 N sing N 322 N sing Y 323 N sing Y 324 N doub N 325 N sing Y 326 N doub N 327 N sing Y 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing US J.Virol. JOVIAM 0825 0022-538X 81 3583 3596 10.1128/JVI.02306-06 17251299 Crystal structure of poliovirus 3CD: virally-encoded protease and precursor to the RNA-dependent RNA polymerase. 2007 10.2210/pdb2ijf/pdb pdb_00002ijf 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 2006-02-26 RIGAKU SINGLE WAVELENGTH M x-ray 1 0.9 1.0 19-ID APS 0.9 SYNCHROTRON APS BEAMLINE 19-ID 52601.953 RNA-directed RNA polymerase 2.7.7.48 G64S, L446D, R455D 1 man polymer no no GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVSNKITEVDEYMKEAVDH YAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVTYVKD ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDAS LSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDH LKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALDLPEYSTLYDRWLDSF GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVSNKITEVDEYMKEAVDH YAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVTYVKD ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDAS LSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDH LKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALDLPEYSTLYDRWLDSF A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Enterovirus Poliovirus Mahoney Escherichia sample 3D 12081 Human poliovirus 1 562 Escherichia coli 1 4.92 74.97 VAPOR DIFFUSION, HANGING DROP 7 2M sodium acetate, 0.1 M HEPES, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Advisory Source and taxonomy Version format compliance Database references Data collection Refinement description 1 0 2007-02-13 1 1 2008-05-01 1 2 2011-07-13 1 3 2021-10-20 1 4 2023-08-30 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Poliovirus 3Dpol RCSB Y RCSB 2006-09-29 REL REL 1RA6 PDB code 1RA6 PDB experimental model GLY 1 n 1 GLY 1 A GLU 2 n 2 GLU 2 A ILE 3 n 3 ILE 3 A GLN 4 n 4 GLN 4 A TRP 5 n 5 TRP 5 A MET 6 n 6 MET 6 A ARG 7 n 7 ARG 7 A PRO 8 n 8 PRO 8 A SER 9 n 9 SER 9 A LYS 10 n 10 LYS 10 A GLU 11 n 11 GLU 11 A VAL 12 n 12 VAL 12 A GLY 13 n 13 GLY 13 A TYR 14 n 14 TYR 14 A PRO 15 n 15 PRO 15 A ILE 16 n 16 ILE 16 A ILE 17 n 17 ILE 17 A ASN 18 n 18 ASN 18 A ALA 19 n 19 ALA 19 A PRO 20 n 20 PRO 20 A SER 21 n 21 SER 21 A LYS 22 n 22 LYS 22 A THR 23 n 23 THR 23 A LYS 24 n 24 LYS 24 A LEU 25 n 25 LEU 25 A GLU 26 n 26 GLU 26 A PRO 27 n 27 PRO 27 A SER 28 n 28 SER 28 A ALA 29 n 29 ALA 29 A PHE 30 n 30 PHE 30 A HIS 31 n 31 HIS 31 A TYR 32 n 32 TYR 32 A VAL 33 n 33 VAL 33 A PHE 34 n 34 PHE 34 A GLU 35 n 35 GLU 35 A GLY 36 n 36 GLY 36 A VAL 37 n 37 VAL 37 A LYS 38 n 38 LYS 38 A GLU 39 n 39 GLU 39 A PRO 40 n 40 PRO 40 A ALA 41 n 41 ALA 41 A VAL 42 n 42 VAL 42 A LEU 43 n 43 LEU 43 A THR 44 n 44 THR 44 A LYS 45 n 45 LYS 45 A ASN 46 n 46 ASN 46 A ASP 47 n 47 ASP 47 A PRO 48 n 48 PRO 48 A ARG 49 n 49 ARG 49 A LEU 50 n 50 LEU 50 A LYS 51 n 51 LYS 51 A THR 52 n 52 THR 52 A ASP 53 n 53 ASP 53 A PHE 54 n 54 PHE 54 A GLU 55 n 55 GLU 55 A GLU 56 n 56 GLU 56 A ALA 57 n 57 ALA 57 A ILE 58 n 58 ILE 58 A PHE 59 n 59 PHE 59 A SER 60 n 60 SER 60 A LYS 61 n 61 LYS 61 A TYR 62 n 62 TYR 62 A VAL 63 n 63 VAL 63 A SER 64 n 64 SER 64 A ASN 65 n 65 ASN 65 A LYS 66 n 66 LYS 66 A ILE 67 n 67 ILE 67 A THR 68 n 68 THR 68 A GLU 69 n 69 GLU 69 A VAL 70 n 70 VAL 70 A ASP 71 n 71 ASP 71 A GLU 72 n 72 GLU 72 A TYR 73 n 73 TYR 73 A MET 74 n 74 MET 74 A LYS 75 n 75 LYS 75 A GLU 76 n 76 GLU 76 A ALA 77 n 77 ALA 77 A VAL 78 n 78 VAL 78 A ASP 79 n 79 ASP 79 A HIS 80 n 80 HIS 80 A TYR 81 n 81 TYR 81 A ALA 82 n 82 ALA 82 A GLY 83 n 83 GLY 83 A GLN 84 n 84 GLN 84 A LEU 85 n 85 LEU 85 A MET 86 n 86 MET 86 A SER 87 n 87 SER 87 A LEU 88 n 88 LEU 88 A ASP 89 n 89 ASP 89 A ILE 90 n 90 ILE 90 A ASN 91 n 91 ASN 91 A THR 92 n 92 THR 92 A GLU 93 n 93 GLU 93 A GLN 94 n 94 GLN 94 A MET 95 n 95 MET 95 A CYS 96 n 96 CYS 96 A LEU 97 n 97 LEU 97 A GLU 98 n 98 GLU 98 A ASP 99 n 99 ASP 99 A ALA 100 n 100 ALA 100 A MET 101 n 101 MET 101 A TYR 102 n 102 TYR 102 A GLY 103 n 103 GLY 103 A THR 104 n 104 THR 104 A ASP 105 n 105 ASP 105 A GLY 106 n 106 GLY 106 A LEU 107 n 107 LEU 107 A GLU 108 n 108 GLU 108 A ALA 109 n 109 ALA 109 A LEU 110 n 110 LEU 110 A ASP 111 n 111 ASP 111 A LEU 112 n 112 LEU 112 A SER 113 n 113 SER 113 A THR 114 n 114 THR 114 A SER 115 n 115 SER 115 A ALA 116 n 116 ALA 116 A GLY 117 n 117 GLY 117 A TYR 118 n 118 TYR 118 A PRO 119 n 119 PRO 119 A TYR 120 n 120 TYR 120 A VAL 121 n 121 VAL 121 A ALA 122 n 122 ALA 122 A MET 123 n 123 MET 123 A GLY 124 n 124 GLY 124 A LYS 125 n 125 LYS 125 A LYS 126 n 126 LYS 126 A LYS 127 n 127 LYS 127 A ARG 128 n 128 ARG 128 A ASP 129 n 129 ASP 129 A ILE 130 n 130 ILE 130 A LEU 131 n 131 LEU 131 A ASN 132 n 132 ASN 132 A LYS 133 n 133 LYS 133 A GLN 134 n 134 GLN 134 A THR 135 n 135 THR 135 A ARG 136 n 136 ARG 136 A ASP 137 n 137 ASP 137 A THR 138 n 138 THR 138 A LYS 139 n 139 LYS 139 A GLU 140 n 140 GLU 140 A MET 141 n 141 MET 141 A GLN 142 n 142 GLN 142 A LYS 143 n 143 LYS 143 A LEU 144 n 144 LEU 144 A LEU 145 n 145 LEU 145 A ASP 146 n 146 ASP 146 A THR 147 n 147 THR 147 A TYR 148 n 148 TYR 148 A GLY 149 n 149 GLY 149 A ILE 150 n 150 ILE 150 A ASN 151 n 151 ASN 151 A LEU 152 n 152 LEU 152 A PRO 153 n 153 PRO 153 A LEU 154 n 154 LEU 154 A VAL 155 n 155 VAL 155 A THR 156 n 156 THR 156 A TYR 157 n 157 TYR 157 A VAL 158 n 158 VAL 158 A LYS 159 n 159 LYS 159 A ASP 160 n 160 ASP 160 A GLU 161 n 161 GLU 161 A LEU 162 n 162 LEU 162 A ARG 163 n 163 ARG 163 A SER 164 n 164 SER 164 A LYS 165 n 165 LYS 165 A THR 166 n 166 THR 166 A LYS 167 n 167 LYS 167 A VAL 168 n 168 VAL 168 A GLU 169 n 169 GLU 169 A GLN 170 n 170 GLN 170 A GLY 171 n 171 GLY 171 A LYS 172 n 172 LYS 172 A SER 173 n 173 SER 173 A ARG 174 n 174 ARG 174 A LEU 175 n 175 LEU 175 A ILE 176 n 176 ILE 176 A GLU 177 n 177 GLU 177 A ALA 178 n 178 ALA 178 A SER 179 n 179 SER 179 A SER 180 n 180 SER 180 A LEU 181 n 181 LEU 181 A ASN 182 n 182 ASN 182 A ASP 183 n 183 ASP 183 A SER 184 n 184 SER 184 A VAL 185 n 185 VAL 185 A ALA 186 n 186 ALA 186 A MET 187 n 187 MET 187 A ARG 188 n 188 ARG 188 A MET 189 n 189 MET 189 A ALA 190 n 190 ALA 190 A PHE 191 n 191 PHE 191 A GLY 192 n 192 GLY 192 A ASN 193 n 193 ASN 193 A LEU 194 n 194 LEU 194 A TYR 195 n 195 TYR 195 A ALA 196 n 196 ALA 196 A ALA 197 n 197 ALA 197 A PHE 198 n 198 PHE 198 A HIS 199 n 199 HIS 199 A LYS 200 n 200 LYS 200 A ASN 201 n 201 ASN 201 A PRO 202 n 202 PRO 202 A GLY 203 n 203 GLY 203 A VAL 204 n 204 VAL 204 A ILE 205 n 205 ILE 205 A THR 206 n 206 THR 206 A GLY 207 n 207 GLY 207 A SER 208 n 208 SER 208 A ALA 209 n 209 ALA 209 A VAL 210 n 210 VAL 210 A GLY 211 n 211 GLY 211 A CYS 212 n 212 CYS 212 A ASP 213 n 213 ASP 213 A PRO 214 n 214 PRO 214 A ASP 215 n 215 ASP 215 A LEU 216 n 216 LEU 216 A PHE 217 n 217 PHE 217 A TRP 218 n 218 TRP 218 A SER 219 n 219 SER 219 A LYS 220 n 220 LYS 220 A ILE 221 n 221 ILE 221 A PRO 222 n 222 PRO 222 A VAL 223 n 223 VAL 223 A LEU 224 n 224 LEU 224 A MET 225 n 225 MET 225 A GLU 226 n 226 GLU 226 A GLU 227 n 227 GLU 227 A LYS 228 n 228 LYS 228 A LEU 229 n 229 LEU 229 A PHE 230 n 230 PHE 230 A ALA 231 n 231 ALA 231 A PHE 232 n 232 PHE 232 A ASP 233 n 233 ASP 233 A TYR 234 n 234 TYR 234 A THR 235 n 235 THR 235 A GLY 236 n 236 GLY 236 A TYR 237 n 237 TYR 237 A ASP 238 n 238 ASP 238 A ALA 239 n 239 ALA 239 A SER 240 n 240 SER 240 A LEU 241 n 241 LEU 241 A SER 242 n 242 SER 242 A PRO 243 n 243 PRO 243 A ALA 244 n 244 ALA 244 A TRP 245 n 245 TRP 245 A PHE 246 n 246 PHE 246 A GLU 247 n 247 GLU 247 A ALA 248 n 248 ALA 248 A LEU 249 n 249 LEU 249 A LYS 250 n 250 LYS 250 A MET 251 n 251 MET 251 A VAL 252 n 252 VAL 252 A LEU 253 n 253 LEU 253 A GLU 254 n 254 GLU 254 A LYS 255 n 255 LYS 255 A ILE 256 n 256 ILE 256 A GLY 257 n 257 GLY 257 A PHE 258 n 258 PHE 258 A GLY 259 n 259 GLY 259 A ASP 260 n 260 ASP 260 A ARG 261 n 261 ARG 261 A VAL 262 n 262 VAL 262 A ASP 263 n 263 ASP 263 A TYR 264 n 264 TYR 264 A ILE 265 n 265 ILE 265 A ASP 266 n 266 ASP 266 A TYR 267 n 267 TYR 267 A LEU 268 n 268 LEU 268 A ASN 269 n 269 ASN 269 A HIS 270 n 270 HIS 270 A SER 271 n 271 SER 271 A HIS 272 n 272 HIS 272 A HIS 273 n 273 HIS 273 A LEU 274 n 274 LEU 274 A TYR 275 n 275 TYR 275 A LYS 276 n 276 LYS 276 A ASN 277 n 277 ASN 277 A LYS 278 n 278 LYS 278 A THR 279 n 279 THR 279 A TYR 280 n 280 TYR 280 A CYS 281 n 281 CYS 281 A VAL 282 n 282 VAL 282 A LYS 283 n 283 LYS 283 A GLY 284 n 284 GLY 284 A GLY 285 n 285 GLY 285 A MET 286 n 286 MET 286 A PRO 287 n 287 PRO 287 A SER 288 n 288 SER 288 A GLY 289 n 289 GLY 289 A CYS 290 n 290 CYS 290 A SER 291 n 291 SER 291 A GLY 292 n 292 GLY 292 A THR 293 n 293 THR 293 A SER 294 n 294 SER 294 A ILE 295 n 295 ILE 295 A PHE 296 n 296 PHE 296 A ASN 297 n 297 ASN 297 A SER 298 n 298 SER 298 A MET 299 n 299 MET 299 A ILE 300 n 300 ILE 300 A ASN 301 n 301 ASN 301 A ASN 302 n 302 ASN 302 A LEU 303 n 303 LEU 303 A ILE 304 n 304 ILE 304 A ILE 305 n 305 ILE 305 A ARG 306 n 306 ARG 306 A THR 307 n 307 THR 307 A LEU 308 n 308 LEU 308 A LEU 309 n 309 LEU 309 A LEU 310 n 310 LEU 310 A LYS 311 n 311 LYS 311 A THR 312 n 312 THR 312 A TYR 313 n 313 TYR 313 A LYS 314 n 314 LYS 314 A GLY 315 n 315 GLY 315 A ILE 316 n 316 ILE 316 A ASP 317 n 317 ASP 317 A LEU 318 n 318 LEU 318 A ASP 319 n 319 ASP 319 A HIS 320 n 320 HIS 320 A LEU 321 n 321 LEU 321 A LYS 322 n 322 LYS 322 A MET 323 n 323 MET 323 A ILE 324 n 324 ILE 324 A ALA 325 n 325 ALA 325 A TYR 326 n 326 TYR 326 A GLY 327 n 327 GLY 327 A ASP 328 n 328 ASP 328 A ASP 329 n 329 ASP 329 A VAL 330 n 330 VAL 330 A ILE 331 n 331 ILE 331 A ALA 332 n 332 ALA 332 A SER 333 n 333 SER 333 A TYR 334 n 334 TYR 334 A PRO 335 n 335 PRO 335 A HIS 336 n 336 HIS 336 A GLU 337 n 337 GLU 337 A VAL 338 n 338 VAL 338 A ASP 339 n 339 ASP 339 A ALA 340 n 340 ALA 340 A SER 341 n 341 SER 341 A LEU 342 n 342 LEU 342 A LEU 343 n 343 LEU 343 A ALA 344 n 344 ALA 344 A GLN 345 n 345 GLN 345 A SER 346 n 346 SER 346 A GLY 347 n 347 GLY 347 A LYS 348 n 348 LYS 348 A ASP 349 n 349 ASP 349 A TYR 350 n 350 TYR 350 A GLY 351 n 351 GLY 351 A LEU 352 n 352 LEU 352 A THR 353 n 353 THR 353 A MET 354 n 354 MET 354 A THR 355 n 355 THR 355 A PRO 356 n 356 PRO 356 A ALA 357 n 357 ALA 357 A ASP 358 n 358 ASP 358 A LYS 359 n 359 LYS 359 A SER 360 n 360 SER 360 A ALA 361 n 361 ALA 361 A THR 362 n 362 THR 362 A PHE 363 n 363 PHE 363 A GLU 364 n 364 GLU 364 A THR 365 n 365 THR 365 A VAL 366 n 366 VAL 366 A THR 367 n 367 THR 367 A TRP 368 n 368 TRP 368 A GLU 369 n 369 GLU 369 A ASN 370 n 370 ASN 370 A VAL 371 n 371 VAL 371 A THR 372 n 372 THR 372 A PHE 373 n 373 PHE 373 A LEU 374 n 374 LEU 374 A LYS 375 n 375 LYS 375 A ARG 376 n 376 ARG 376 A PHE 377 n 377 PHE 377 A PHE 378 n 378 PHE 378 A ARG 379 n 379 ARG 379 A ALA 380 n 380 ALA 380 A ASP 381 n 381 ASP 381 A GLU 382 n 382 GLU 382 A LYS 383 n 383 LYS 383 A TYR 384 n 384 TYR 384 A PRO 385 n 385 PRO 385 A PHE 386 n 386 PHE 386 A LEU 387 n 387 LEU 387 A ILE 388 n 388 ILE 388 A HIS 389 n 389 HIS 389 A PRO 390 n 390 PRO 390 A VAL 391 n 391 VAL 391 A MET 392 n 392 MET 392 A PRO 393 n 393 PRO 393 A MET 394 n 394 MET 394 A LYS 395 n 395 LYS 395 A GLU 396 n 396 GLU 396 A ILE 397 n 397 ILE 397 A HIS 398 n 398 HIS 398 A GLU 399 n 399 GLU 399 A SER 400 n 400 SER 400 A ILE 401 n 401 ILE 401 A ARG 402 n 402 ARG 402 A TRP 403 n 403 TRP 403 A THR 404 n 404 THR 404 A LYS 405 n 405 LYS 405 A ASP 406 n 406 ASP 406 A PRO 407 n 407 PRO 407 A ARG 408 n 408 ARG 408 A ASN 409 n 409 ASN 409 A THR 410 n 410 THR 410 A GLN 411 n 411 GLN 411 A ASP 412 n 412 ASP 412 A HIS 413 n 413 HIS 413 A VAL 414 n 414 VAL 414 A ARG 415 n 415 ARG 415 A SER 416 n 416 SER 416 A LEU 417 n 417 LEU 417 A CYS 418 n 418 CYS 418 A LEU 419 n 419 LEU 419 A LEU 420 n 420 LEU 420 A ALA 421 n 421 ALA 421 A TRP 422 n 422 TRP 422 A HIS 423 n 423 HIS 423 A ASN 424 n 424 ASN 424 A GLY 425 n 425 GLY 425 A GLU 426 n 426 GLU 426 A GLU 427 n 427 GLU 427 A GLU 428 n 428 GLU 428 A TYR 429 n 429 TYR 429 A ASN 430 n 430 ASN 430 A LYS 431 n 431 LYS 431 A PHE 432 n 432 PHE 432 A LEU 433 n 433 LEU 433 A ALA 434 n 434 ALA 434 A LYS 435 n 435 LYS 435 A ILE 436 n 436 ILE 436 A ARG 437 n 437 ARG 437 A SER 438 n 438 SER 438 A VAL 439 n 439 VAL 439 A PRO 440 n 440 PRO 440 A ILE 441 n 441 ILE 441 A GLY 442 n 442 GLY 442 A ARG 443 n 443 ARG 443 A ALA 444 n 444 ALA 444 A LEU 445 n 445 LEU 445 A ASP 446 n 446 ASP 446 A LEU 447 n 447 LEU 447 A PRO 448 n 448 PRO 448 A GLU 449 n 449 GLU 449 A TYR 450 n 450 TYR 450 A SER 451 n 451 SER 451 A THR 452 n 452 THR 452 A LEU 453 n 453 LEU 453 A TYR 454 n 454 TYR 454 A ASP 455 n 455 ASP 455 A ARG 456 n 456 ARG 456 A TRP 457 n 457 TRP 457 A LEU 458 n 458 LEU 458 A ASP 459 n 459 ASP 459 A SER 460 n 460 SER 460 A PHE 461 n 461 PHE 461 A 1.2179 -0.1232 0.8859 2.0615 -0.7153 5.3774 -0.0699 -0.3075 0.1189 0.2144 0.0543 -0.2220 -0.5687 -0.8536 0.0156 -0.4566 0.0611 -0.0025 -0.5599 0.0057 -0.3917 refined 59.1593 2.8303 6.1290 X-RAY DIFFRACTION A 1 A 1 A 461 A 461 X-RAY DIFFRACTION 1 author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 2 A N GLU 2 A O LYS 283 A O LYS 283 A O VAL 282 A O VAL 282 A N SER 271 A N SER 271 A O LEU 274 A O LEU 274 A N THR 156 A N THR 156 A N TYR 157 A N TYR 157 A O ILE 176 A O ILE 176 A N GLU 26 A N GLU 26 A O THR 404 A O THR 404 A N GLU 39 A N GLU 39 A O ARG 163 A O ARG 163 A N LYS 228 A N LYS 228 A O TYR 334 A O TYR 334 A O ASP 329 A O ASP 329 A N TYR 326 A N TYR 326 A N ASP 233 A N ASP 233 A O THR 355 A O THR 355 A N PHE 373 A N PHE 373 A O ARG 376 A O ARG 376 A N PHE 377 A N PHE 377 A O VAL 391 A O VAL 391 1 A SER 60 -59.19 -5.16 1 A VAL 63 -63.62 -93.82 1 A THR 104 179.75 174.47 1 A ARG 261 -143.31 38.63 1 A ASN 269 -59.09 -78.38 1 A LYS 276 52.28 -117.54 1 A LYS 359 48.99 15.03 89.240 6.84 3.42 0.00 6.84 0.00 -10.26 0.944 0.928 0.24447 0.21165 0.21322 3.00 20.00 1038 19216 5.1 99.61 34.668 0.261 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT 0.592 0.328 0.80 0.80 1.20 PDB code 1RA6 BABINET MODEL WITH MASK 3.00 20.00 0 3697 0 0 3697 0.010 0.022 3787 1.545 1.966 5124 1.435 5.000 460 24.803 24.294 170 7.888 15.000 674 7.990 15.000 17 0.112 0.200 556 0.000 0.020 2848 0.233 0.200 1616 0.319 0.200 2616 0.120 0.200 103 0.235 0.200 22 2.026 2.000 2344 3.328 4.000 3716 4.407 4.000 1638 6.422 6.000 1408 0.398 0.393 3.160 146 2683 10 97.79 3.0 30.0 2IJF 20317 0 0 1 6.0 3.0 3.11 1 4.7 refinement REFMAC 5.2.0019 data collection HKL-2000 data reduction HKL-2000 data scaling HKL-2000 phasing PHASER Crystal Structure of the Poliovirus RNA-Dependent RNA Polymerase Fidelity Mutant 3Dpol G64S 1 N N A LYS 10 A LYS 10 HELX_P A GLY 13 A GLY 13 5 1 4 A ASP 53 A ASP 53 HELX_P A SER 60 A SER 60 1 2 8 A ASP 71 A ASP 71 HELX_P A SER 87 A SER 87 1 3 17 A CYS 96 A CYS 96 HELX_P A GLY 103 A GLY 103 1 4 8 A PRO 119 A PRO 119 HELX_P A MET 123 A MET 123 5 5 5 A LYS 126 A LYS 126 HELX_P A ILE 130 A ILE 130 5 6 5 A THR 138 A THR 138 HELX_P A GLY 149 A GLY 149 1 7 12 A SER 164 A SER 164 HELX_P A GLN 170 A GLN 170 1 8 7 A SER 180 A SER 180 HELX_P A LYS 200 A LYS 200 1 9 21 A ASP 213 A ASP 213 HELX_P A TRP 218 A TRP 218 1 10 6 A LYS 220 A LYS 220 HELX_P A MET 225 A MET 225 1 11 6 A GLY 236 A GLY 236 HELX_P A LEU 241 A LEU 241 1 12 6 A SER 242 A SER 242 HELX_P A ILE 256 A ILE 256 1 13 15 A PHE 258 A PHE 258 HELX_P A ARG 261 A ARG 261 5 14 4 A VAL 262 A VAL 262 HELX_P A HIS 270 A HIS 270 1 15 9 A GLY 292 A GLY 292 HELX_P A TYR 313 A TYR 313 1 16 22 A ASP 317 A ASP 317 HELX_P A LEU 321 A LEU 321 5 17 5 A ASP 339 A ASP 339 HELX_P A TYR 350 A TYR 350 1 18 12 A ASP 358 A ASP 358 HELX_P A SER 360 A SER 360 5 19 3 A PRO 393 A PRO 393 HELX_P A ARG 402 A ARG 402 1 20 10 A ASN 409 A ASN 409 HELX_P A TRP 422 A TRP 422 1 21 14 A GLY 425 A GLY 425 HELX_P A ARG 437 A ARG 437 1 22 13 A VAL 439 A VAL 439 HELX_P A LEU 445 A LEU 445 1 23 7 A GLU 449 A GLU 449 HELX_P A SER 460 A SER 460 1 24 12 TRANSFERASE RNA-dependent RNA polymerase, fidelity, RNA polymerase, poliovirus, TRANSFERASE A TYR 118 A TYR 118 1 A PRO 119 A PRO 119 -0.44 POLG_POL1M UNP 1 1748 P03300 GEIQWMRPSKEVGYPIINAPSKTKLEPSAFHYVFEGVKEPAVLTKNDPRLKTDFEEAIFSKYVGNKITEVDEYMKEAVDH YAGQLMSLDINTEQMCLEDAMYGTDGLEALDLSTSAGYPYVAMGKKKRDILNKQTRDTKEMQKLLDTYGINLPLVTYVKD ELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWSKIPVLMEEKLFAFDYTGYDAS LSPAWFEALKMVLEKIGFGDRVDYIDYLNHSHHLYKNKTYCVKGGMPSGCSGTSIFNSMINNLIIRTLLLKTYKGIDLDH LKMIAYGDDVIASYPHEVDASLLAQSGKDYGLTMTPADKSATFETVTWENVTFLKRFFRADEKYPFLIHPVMPMKEIHES IRWTKDPRNTQDHVRSLCLLAWHNGEEEYNKFLAKIRSVPIGRALLLPEYSTLYRRWLDSF 1748 2208 2IJF 1 461 P03300 A 1 1 461 1 GLY engineered mutation SER 64 2IJF A P03300 UNP 1811 64 1 LEU engineered mutation ASP 446 2IJF A P03300 UNP 2193 446 1 ARG engineered mutation ASP 455 2IJF A P03300 UNP 2202 455 5 2 2 3 2 3 anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 2 A GLU 2 A PRO 8 A PRO 8 A LYS 278 A LYS 278 A LYS 283 A LYS 283 A SER 271 A SER 271 A TYR 275 A TYR 275 A LEU 154 A LEU 154 A VAL 158 A VAL 158 A LEU 175 A LEU 175 A ALA 178 A ALA 178 A GLU 26 A GLU 26 A PRO 27 A PRO 27 A TRP 403 A TRP 403 A THR 404 A THR 404 A GLU 39 A GLU 39 A PRO 40 A PRO 40 A LEU 162 A LEU 162 A ARG 163 A ARG 163 A LYS 228 A LYS 228 A PHE 230 A PHE 230 A ASP 329 A ASP 329 A TYR 334 A TYR 334 A LYS 322 A LYS 322 A TYR 326 A TYR 326 A PHE 232 A PHE 232 A TYR 234 A TYR 234 A MET 354 A MET 354 A PRO 356 A PRO 356 A THR 372 A THR 372 A PHE 373 A PHE 373 A ARG 376 A ARG 376 A ALA 380 A ALA 380 A ILE 388 A ILE 388 A VAL 391 A VAL 391 170 P 65