0.012041
0.000000
0.000000
0.000000
0.008864
0.000000
0.000000
0.000000
0.013492
0.00000
0.00000
0.00000
Lundqvist, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
83.050
112.820
74.120
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C23 H36 N4 O20 P2
750.494
n
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Nature
NATUAS
0006
0028-0836
447
817
10.1038/NATURE05689
17568739
Exploitation of Structural and Regulatory Diversity in Glutamate Racemases
2007
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2000-04-11
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
0.9456
1.0
ID14-4
ESRF
0.9456
SYNCHROTRON
ESRF BEAMLINE ID14-4
31033.871
GLUTAMATE RACEMASE
5.1.1.3
1
man
polymer
147.129
GLUTAMIC ACID
1
syn
non-polymer
750.494
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE
1
syn
non-polymer
18.015
water
221
nat
water
no
no
MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ
ERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEML
GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLE
HEAPDAKSADANIAFCMAMTPGAEQLLPVLQRYGFETLEKLAVLG
MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLLPDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQ
ERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEML
GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWLLE
HEAPDAKSADANIAFCMAMTPGAEQLLPVLQRYGFETLEKLAVLG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
562
ESCHERICHIA COLI
562
ESCHERICHIA COLI
1
2.66
53
PROTEIN FORMULATED AT 10 MG/ML WITH 200MM AMMONIUM ACETATE PH 7.4, 5MM D-L GLUTAMATE, 1 MM TCEP AND IN 0.6 MM OF THE ACTIVATOR MUR-NAC-ALA AND CRYSTALLISED WITH 100 MM SODIUM ACETATE PH 4.55-10% MME 2000 AND 30% GLYCEROL
repository
Initial release
Version format compliance
Version format compliance
1
0
2007-07-03
1
1
2011-05-08
1
2
2011-07-13
CRYSTAL STRUCTURE OF E. FAECALIS GLUTAMATE RACEMASE IN COMPLEX WITH D- AND L- GLUTAMATE
CRYSTAL STRUCTURE OF E. FAECALIS GLUTAMATE RACEMASE IN COMPLEX WITH D-GLUTAMATE
CRYSTAL STRUCTURE OF S. AUREUS GLUTAMATE RACEMASE IN COMPLEX WITH D-GLUTAMATE
CRYSTAL STRUCTURE OF E. FAECIUM GLUTAMATE RACEMASE IN COMPLEX WITH PHOSPHATE
SHEET
THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN
ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW,
TWO SHEETS ARE DEFINED.
PDBE
Y
PDBE
2007-02-03
REL
GLU
GLUTAMIC ACID
UMA
URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE
HOH
water
GLU
1287
2
GLU
GLU
1287
A
UMA
1286
3
UMA
UMA
1286
A
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2089
4
HOH
HOH
2089
A
HOH
2090
4
HOH
HOH
2090
A
HOH
2091
4
HOH
HOH
2091
A
HOH
2092
4
HOH
HOH
2092
A
HOH
2093
4
HOH
HOH
2093
A
HOH
2094
4
HOH
HOH
2094
A
HOH
2095
4
HOH
HOH
2095
A
HOH
2096
4
HOH
HOH
2096
A
HOH
2097
4
HOH
HOH
2097
A
HOH
2098
4
HOH
HOH
2098
A
HOH
2099
4
HOH
HOH
2099
A
HOH
2100
4
HOH
HOH
2100
A
HOH
2101
4
HOH
HOH
2101
A
HOH
2102
4
HOH
HOH
2102
A
HOH
2103
4
HOH
HOH
2103
A
HOH
2104
4
HOH
HOH
2104
A
HOH
2105
4
HOH
HOH
2105
A
HOH
2106
4
HOH
HOH
2106
A
HOH
2107
4
HOH
HOH
2107
A
HOH
2108
4
HOH
HOH
2108
A
HOH
2109
4
HOH
HOH
2109
A
HOH
2110
4
HOH
HOH
2110
A
HOH
2111
4
HOH
HOH
2111
A
HOH
2112
4
HOH
HOH
2112
A
HOH
2113
4
HOH
HOH
2113
A
HOH
2114
4
HOH
HOH
2114
A
HOH
2115
4
HOH
HOH
2115
A
HOH
2116
4
HOH
HOH
2116
A
HOH
2117
4
HOH
HOH
2117
A
HOH
2118
4
HOH
HOH
2118
A
HOH
2119
4
HOH
HOH
2119
A
HOH
2120
4
HOH
HOH
2120
A
HOH
2121
4
HOH
HOH
2121
A
HOH
2122
4
HOH
HOH
2122
A
HOH
2123
4
HOH
HOH
2123
A
HOH
2124
4
HOH
HOH
2124
A
HOH
2125
4
HOH
HOH
2125
A
HOH
2126
4
HOH
HOH
2126
A
HOH
2127
4
HOH
HOH
2127
A
HOH
2128
4
HOH
HOH
2128
A
HOH
2129
4
HOH
HOH
2129
A
HOH
2130
4
HOH
HOH
2130
A
HOH
2131
4
HOH
HOH
2131
A
HOH
2132
4
HOH
HOH
2132
A
HOH
2133
4
HOH
HOH
2133
A
HOH
2134
4
HOH
HOH
2134
A
HOH
2135
4
HOH
HOH
2135
A
HOH
2136
4
HOH
HOH
2136
A
HOH
2137
4
HOH
HOH
2137
A
HOH
2138
4
HOH
HOH
2138
A
HOH
2139
4
HOH
HOH
2139
A
HOH
2140
4
HOH
HOH
2140
A
HOH
2141
4
HOH
HOH
2141
A
HOH
2142
4
HOH
HOH
2142
A
HOH
2143
4
HOH
HOH
2143
A
HOH
2144
4
HOH
HOH
2144
A
HOH
2145
4
HOH
HOH
2145
A
HOH
2146
4
HOH
HOH
2146
A
HOH
2147
4
HOH
HOH
2147
A
HOH
2148
4
HOH
HOH
2148
A
HOH
2149
4
HOH
HOH
2149
A
HOH
2150
4
HOH
HOH
2150
A
HOH
2151
4
HOH
HOH
2151
A
HOH
2152
4
HOH
HOH
2152
A
HOH
2153
4
HOH
HOH
2153
A
HOH
2154
4
HOH
HOH
2154
A
HOH
2155
4
HOH
HOH
2155
A
HOH
2156
4
HOH
HOH
2156
A
HOH
2157
4
HOH
HOH
2157
A
HOH
2158
4
HOH
HOH
2158
A
HOH
2159
4
HOH
HOH
2159
A
HOH
2160
4
HOH
HOH
2160
A
HOH
2161
4
HOH
HOH
2161
A
HOH
2162
4
HOH
HOH
2162
A
HOH
2163
4
HOH
HOH
2163
A
HOH
2164
4
HOH
HOH
2164
A
HOH
2165
4
HOH
HOH
2165
A
HOH
2166
4
HOH
HOH
2166
A
HOH
2167
4
HOH
HOH
2167
A
HOH
2168
4
HOH
HOH
2168
A
HOH
2169
4
HOH
HOH
2169
A
HOH
2170
4
HOH
HOH
2170
A
HOH
2171
4
HOH
HOH
2171
A
HOH
2172
4
HOH
HOH
2172
A
HOH
2173
4
HOH
HOH
2173
A
HOH
2174
4
HOH
HOH
2174
A
HOH
2175
4
HOH
HOH
2175
A
HOH
2176
4
HOH
HOH
2176
A
HOH
2177
4
HOH
HOH
2177
A
HOH
2178
4
HOH
HOH
2178
A
HOH
2179
4
HOH
HOH
2179
A
HOH
2180
4
HOH
HOH
2180
A
HOH
2181
4
HOH
HOH
2181
A
HOH
2182
4
HOH
HOH
2182
A
HOH
2183
4
HOH
HOH
2183
A
HOH
2184
4
HOH
HOH
2184
A
HOH
2185
4
HOH
HOH
2185
A
HOH
2186
4
HOH
HOH
2186
A
HOH
2187
4
HOH
HOH
2187
A
HOH
2188
4
HOH
HOH
2188
A
HOH
2189
4
HOH
HOH
2189
A
HOH
2190
4
HOH
HOH
2190
A
HOH
2191
4
HOH
HOH
2191
A
HOH
2192
4
HOH
HOH
2192
A
HOH
2193
4
HOH
HOH
2193
A
HOH
2194
4
HOH
HOH
2194
A
HOH
2195
4
HOH
HOH
2195
A
HOH
2196
4
HOH
HOH
2196
A
HOH
2197
4
HOH
HOH
2197
A
HOH
2198
4
HOH
HOH
2198
A
HOH
2199
4
HOH
HOH
2199
A
HOH
2200
4
HOH
HOH
2200
A
HOH
2201
4
HOH
HOH
2201
A
HOH
2202
4
HOH
HOH
2202
A
HOH
2203
4
HOH
HOH
2203
A
HOH
2204
4
HOH
HOH
2204
A
HOH
2205
4
HOH
HOH
2205
A
HOH
2206
4
HOH
HOH
2206
A
HOH
2207
4
HOH
HOH
2207
A
HOH
2208
4
HOH
HOH
2208
A
HOH
2209
4
HOH
HOH
2209
A
HOH
2210
4
HOH
HOH
2210
A
HOH
2211
4
HOH
HOH
2211
A
HOH
2212
4
HOH
HOH
2212
A
HOH
2213
4
HOH
HOH
2213
A
HOH
2214
4
HOH
HOH
2214
A
HOH
2215
4
HOH
HOH
2215
A
HOH
2216
4
HOH
HOH
2216
A
HOH
2217
4
HOH
HOH
2217
A
HOH
2218
4
HOH
HOH
2218
A
HOH
2219
4
HOH
HOH
2219
A
HOH
2220
4
HOH
HOH
2220
A
HOH
2221
4
HOH
HOH
2221
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
n
13
13
A
n
14
14
A
n
15
15
A
n
16
16
A
n
17
17
A
n
18
18
A
n
19
19
A
PRO
20
n
20
PRO
20
A
ARG
21
n
21
ARG
21
A
PRO
22
n
22
PRO
22
A
THR
23
n
23
THR
23
A
VAL
24
n
24
VAL
24
A
LEU
25
n
25
LEU
25
A
VAL
26
n
26
VAL
26
A
PHE
27
n
27
PHE
27
A
ASP
28
n
28
ASP
28
A
SER
29
n
29
SER
29
A
GLY
30
n
30
GLY
30
A
VAL
31
n
31
VAL
31
A
GLY
32
n
32
GLY
32
A
GLY
33
n
33
GLY
33
A
LEU
34
n
34
LEU
34
A
SER
35
n
35
SER
35
A
VAL
36
n
36
VAL
36
A
TYR
37
n
37
TYR
37
A
ASP
38
n
38
ASP
38
A
GLU
39
n
39
GLU
39
A
ILE
40
n
40
ILE
40
A
ARG
41
n
41
ARG
41
A
HIS
42
n
42
HIS
42
A
LEU
43
n
43
LEU
43
A
LEU
44
n
44
LEU
44
A
PRO
45
n
45
PRO
45
A
ASP
46
n
46
ASP
46
A
LEU
47
n
47
LEU
47
A
HIS
48
n
48
HIS
48
A
TYR
49
n
49
TYR
49
A
ILE
50
n
50
ILE
50
A
TYR
51
n
51
TYR
51
A
ALA
52
n
52
ALA
52
A
PHE
53
n
53
PHE
53
A
ASP
54
n
54
ASP
54
A
ASN
55
n
55
ASN
55
A
VAL
56
n
56
VAL
56
A
ALA
57
n
57
ALA
57
A
PHE
58
n
58
PHE
58
A
PRO
59
n
59
PRO
59
A
TYR
60
n
60
TYR
60
A
GLY
61
n
61
GLY
61
A
GLU
62
n
62
GLU
62
A
LYS
63
n
63
LYS
63
A
SER
64
n
64
SER
64
A
GLU
65
n
65
GLU
65
A
ALA
66
n
66
ALA
66
A
PHE
67
n
67
PHE
67
A
ILE
68
n
68
ILE
68
A
VAL
69
n
69
VAL
69
A
GLU
70
n
70
GLU
70
A
ARG
71
n
71
ARG
71
A
VAL
72
n
72
VAL
72
A
VAL
73
n
73
VAL
73
A
ALA
74
n
74
ALA
74
A
ILE
75
n
75
ILE
75
A
VAL
76
n
76
VAL
76
A
THR
77
n
77
THR
77
A
ALA
78
n
78
ALA
78
A
VAL
79
n
79
VAL
79
A
GLN
80
n
80
GLN
80
A
GLU
81
n
81
GLU
81
A
ARG
82
n
82
ARG
82
A
TYR
83
n
83
TYR
83
A
PRO
84
n
84
PRO
84
A
LEU
85
n
85
LEU
85
A
ALA
86
n
86
ALA
86
A
LEU
87
n
87
LEU
87
A
ALA
88
n
88
ALA
88
A
VAL
89
n
89
VAL
89
A
VAL
90
n
90
VAL
90
A
ALA
91
n
91
ALA
91
A
CYS
92
n
92
CYS
92
A
ASN
93
n
93
ASN
93
A
THR
94
n
94
THR
94
A
ALA
95
n
95
ALA
95
A
SER
96
n
96
SER
96
A
THR
97
n
97
THR
97
A
VAL
98
n
98
VAL
98
A
SER
99
n
99
SER
99
A
LEU
100
n
100
LEU
100
A
PRO
101
n
101
PRO
101
A
ALA
102
n
102
ALA
102
A
LEU
103
n
103
LEU
103
A
ARG
104
n
104
ARG
104
A
GLU
105
n
105
GLU
105
A
LYS
106
n
106
LYS
106
A
PHE
107
n
107
PHE
107
A
ASP
108
n
108
ASP
108
A
PHE
109
n
109
PHE
109
A
PRO
110
n
110
PRO
110
A
VAL
111
n
111
VAL
111
A
VAL
112
n
112
VAL
112
A
GLY
113
n
113
GLY
113
A
VAL
114
n
114
VAL
114
A
VAL
115
n
115
VAL
115
A
PRO
116
n
116
PRO
116
A
ALA
117
n
117
ALA
117
A
ILE
118
n
118
ILE
118
A
LYS
119
n
119
LYS
119
A
PRO
120
n
120
PRO
120
A
ALA
121
n
121
ALA
121
A
ALA
122
n
122
ALA
122
A
ARG
123
n
123
ARG
123
A
LEU
124
n
124
LEU
124
A
THR
125
n
125
THR
125
A
ALA
126
n
126
ALA
126
A
ASN
127
n
127
ASN
127
A
GLY
128
n
128
GLY
128
A
ILE
129
n
129
ILE
129
A
VAL
130
n
130
VAL
130
A
GLY
131
n
131
GLY
131
A
LEU
132
n
132
LEU
132
A
LEU
133
n
133
LEU
133
A
ALA
134
n
134
ALA
134
A
THR
135
n
135
THR
135
A
ARG
136
n
136
ARG
136
A
GLY
137
n
137
GLY
137
A
THR
138
n
138
THR
138
A
VAL
139
n
139
VAL
139
A
LYS
140
n
140
LYS
140
A
ARG
141
n
141
ARG
141
A
SER
142
n
142
SER
142
A
TYR
143
n
143
TYR
143
A
THR
144
n
144
THR
144
A
HIS
145
n
145
HIS
145
A
GLU
146
n
146
GLU
146
A
LEU
147
n
147
LEU
147
A
ILE
148
n
148
ILE
148
A
ALA
149
n
149
ALA
149
A
ARG
150
n
150
ARG
150
A
PHE
151
n
151
PHE
151
A
ALA
152
n
152
ALA
152
A
ASN
153
n
153
ASN
153
A
GLU
154
n
154
GLU
154
A
CYS
155
n
155
CYS
155
A
GLN
156
n
156
GLN
156
A
ILE
157
n
157
ILE
157
A
GLU
158
n
158
GLU
158
A
MET
159
n
159
MET
159
A
LEU
160
n
160
LEU
160
A
GLY
161
n
161
GLY
161
A
SER
162
n
162
SER
162
A
ALA
163
n
163
ALA
163
A
GLU
164
n
164
GLU
164
A
MET
165
n
165
MET
165
A
VAL
166
n
166
VAL
166
A
GLU
167
n
167
GLU
167
A
LEU
168
n
168
LEU
168
A
ALA
169
n
169
ALA
169
A
GLU
170
n
170
GLU
170
A
ALA
171
n
171
ALA
171
A
LYS
172
n
172
LYS
172
A
LEU
173
n
173
LEU
173
A
HIS
174
n
174
HIS
174
A
GLY
175
n
175
GLY
175
A
GLU
176
n
176
GLU
176
A
ASP
177
n
177
ASP
177
A
VAL
178
n
178
VAL
178
A
SER
179
n
179
SER
179
A
LEU
180
n
180
LEU
180
A
ASP
181
n
181
ASP
181
A
ALA
182
n
182
ALA
182
A
LEU
183
n
183
LEU
183
A
LYS
184
n
184
LYS
184
A
ARG
185
n
185
ARG
185
A
ILE
186
n
186
ILE
186
A
LEU
187
n
187
LEU
187
A
ARG
188
n
188
ARG
188
A
PRO
189
n
189
PRO
189
A
TRP
190
n
190
TRP
190
A
LEU
191
n
191
LEU
191
A
ARG
192
n
192
ARG
192
A
MET
193
n
193
MET
193
A
LYS
194
n
194
LYS
194
A
GLU
195
n
195
GLU
195
A
PRO
196
n
196
PRO
196
A
PRO
197
n
197
PRO
197
A
ASP
198
n
198
ASP
198
A
THR
199
n
199
THR
199
A
VAL
200
n
200
VAL
200
A
VAL
201
n
201
VAL
201
A
LEU
202
n
202
LEU
202
A
GLY
203
n
203
GLY
203
A
CYS
204
n
204
CYS
204
A
THR
205
n
205
THR
205
A
HIS
206
n
206
HIS
206
A
PHE
207
n
207
PHE
207
A
PRO
208
n
208
PRO
208
A
LEU
209
n
209
LEU
209
A
LEU
210
n
210
LEU
210
A
GLN
211
n
211
GLN
211
A
GLU
212
n
212
GLU
212
A
GLU
213
n
213
GLU
213
A
LEU
214
n
214
LEU
214
A
LEU
215
n
215
LEU
215
A
GLN
216
n
216
GLN
216
A
VAL
217
n
217
VAL
217
A
LEU
218
n
218
LEU
218
A
PRO
219
n
219
PRO
219
A
GLU
220
n
220
GLU
220
A
GLY
221
n
221
GLY
221
A
THR
222
n
222
THR
222
A
ARG
223
n
223
ARG
223
A
LEU
224
n
224
LEU
224
A
VAL
225
n
225
VAL
225
A
ASP
226
n
226
ASP
226
A
SER
227
n
227
SER
227
A
GLY
228
n
228
GLY
228
A
ALA
229
n
229
ALA
229
A
ALA
230
n
230
ALA
230
A
ILE
231
n
231
ILE
231
A
ALA
232
n
232
ALA
232
A
ARG
233
n
233
ARG
233
A
ARG
234
n
234
ARG
234
A
THR
235
n
235
THR
235
A
ALA
236
n
236
ALA
236
A
TRP
237
n
237
TRP
237
A
LEU
238
n
238
LEU
238
A
LEU
239
n
239
LEU
239
A
GLU
240
n
240
GLU
240
A
HIS
241
n
241
HIS
241
A
GLU
242
n
242
GLU
242
A
ALA
243
n
243
ALA
243
A
PRO
244
n
244
PRO
244
A
ASP
245
n
245
ASP
245
A
ALA
246
n
246
ALA
246
A
LYS
247
n
247
LYS
247
A
SER
248
n
248
SER
248
A
ALA
249
n
249
ALA
249
A
ASP
250
n
250
ASP
250
A
ALA
251
n
251
ALA
251
A
ASN
252
n
252
ASN
252
A
ILE
253
n
253
ILE
253
A
ALA
254
n
254
ALA
254
A
PHE
255
n
255
PHE
255
A
CYS
256
n
256
CYS
256
A
MET
257
n
257
MET
257
A
ALA
258
n
258
ALA
258
A
MET
259
n
259
MET
259
A
THR
260
n
260
THR
260
A
PRO
261
n
261
PRO
261
A
GLY
262
n
262
GLY
262
A
ALA
263
n
263
ALA
263
A
GLU
264
n
264
GLU
264
A
GLN
265
n
265
GLN
265
A
LEU
266
n
266
LEU
266
A
LEU
267
n
267
LEU
267
A
PRO
268
n
268
PRO
268
A
VAL
269
n
269
VAL
269
A
LEU
270
n
270
LEU
270
A
GLN
271
n
271
GLN
271
A
ARG
272
n
272
ARG
272
A
TYR
273
n
273
TYR
273
A
GLY
274
n
274
GLY
274
A
PHE
275
n
275
PHE
275
A
GLU
276
n
276
GLU
276
A
THR
277
n
277
THR
277
A
LEU
278
n
278
LEU
278
A
GLU
279
n
279
GLU
279
A
LYS
280
n
280
LYS
280
A
LEU
281
n
281
LEU
281
A
ALA
282
n
282
ALA
282
A
VAL
283
n
283
VAL
283
A
LEU
284
n
284
LEU
284
A
GLY
285
n
285
GLY
285
A
author_and_software_defined_assembly
PQS
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
112
A
N
VAL
112
A
O
ALA
88
A
O
ALA
88
A
N
VAL
89
A
N
VAL
89
A
O
LEU
25
A
O
LEU
25
A
N
ARG
21
A
N
ARG
21
A
O
SER
248
A
O
SER
248
A
N
VAL
112
A
N
VAL
112
A
O
ALA
88
A
O
ALA
88
A
N
VAL
89
A
N
VAL
89
A
O
LEU
25
A
O
LEU
25
A
N
VAL
24
A
N
VAL
24
A
O
HIS
48
A
O
HIS
48
A
N
TYR
51
A
N
TYR
51
A
O
ILE
253
A
O
ILE
253
A
N
ALA
254
A
N
ALA
254
A
O
THR
277
A
O
THR
277
A
N
GLU
158
A
N
GLU
158
A
O
VAL
130
A
O
VAL
130
A
N
GLY
131
A
N
GLY
131
A
O
THR
199
A
O
THR
199
A
N
VAL
200
A
N
VAL
200
A
O
ARG
223
A
O
ARG
223
1
A
MET
1
A
MET
1
1
Y
1
A
ALA
2
A
ALA
2
1
Y
1
A
THR
3
A
THR
3
1
Y
1
A
LYS
4
A
LYS
4
1
Y
1
A
LEU
5
A
LEU
5
1
Y
1
A
GLN
6
A
GLN
6
1
Y
1
A
ASP
7
A
ASP
7
1
Y
1
A
GLY
8
A
GLY
8
1
Y
1
A
ASN
9
A
ASN
9
1
Y
1
A
THR
10
A
THR
10
1
Y
1
A
PRO
11
A
PRO
11
1
Y
1
A
CYS
12
A
CYS
12
1
Y
1
A
LEU
13
A
LEU
13
1
Y
1
A
ALA
14
A
ALA
14
1
Y
1
A
ALA
15
A
ALA
15
1
Y
1
A
THR
16
A
THR
16
1
Y
1
A
PRO
17
A
PRO
17
1
Y
1
A
SER
18
A
SER
18
1
Y
1
A
GLU
19
A
GLU
19
1
Y
1
A
SER
96
-44.07
-76.55
1
A
THR
97
-35.08
-71.72
1
A
ALA
117
-72.64
48.99
1
A
GLU
242
-145.49
-28.24
1
A
LEU
284
-111.54
51.60
A
A
3.991
0.000
0.000
-8.126
0.000
4.136
0.2440
0.2185
1.9
20.0
1344
26542
4.8
RANDOM
1
THROUGHOUT
0.0
MAD
48.6342
0.373583
1.9
20.0
221
2327
59
0
2047
0.006037
1.31354
1.900
20.000
2JFN
338825
2.100
0.07000
1
5.6000
6.400
95.6
0.36000
1.90
2.00
2.100
1
3.70
78.5
refinement
CNX
2000.2
data reduction
MOSFLM
data scaling
SCALA
phasing
SOLVE
GLUTAMATE RACEMASE (E.C.5.1.1.3)
Crystal structure of Escherichia coli glutamate racemase in complex with L- Glutamate and activator UDP-MurNAc-ala
1
N
N
2
N
N
3
N
N
4
N
N
A
GLY
32
A
GLY
32
HELX_P
A
LEU
44
A
LEU
44
1
1
13
A
SER
64
A
SER
64
HELX_P
A
TYR
83
A
TYR
83
1
2
20
A
CYS
92
A
CYS
92
HELX_P
A
PHE
107
A
PHE
107
1
3
16
A
ALA
117
A
ALA
117
HELX_P
A
THR
125
A
THR
125
1
4
9
A
GLY
137
A
GLY
137
HELX_P
A
LYS
140
A
LYS
140
5
5
4
A
ARG
141
A
ARG
141
HELX_P
A
PHE
151
A
PHE
151
1
6
11
A
SER
162
A
SER
162
HELX_P
A
HIS
174
A
HIS
174
1
7
13
A
SER
179
A
SER
179
HELX_P
A
LEU
187
A
LEU
187
1
8
9
A
LEU
187
A
LEU
187
HELX_P
A
ARG
192
A
ARG
192
1
9
6
A
HIS
206
A
HIS
206
HELX_P
A
LEU
209
A
LEU
209
5
10
4
A
LEU
210
A
LEU
210
HELX_P
A
LEU
218
A
LEU
218
1
11
9
A
SER
227
A
SER
227
HELX_P
A
GLU
242
A
GLU
242
1
12
16
A
THR
260
A
THR
260
HELX_P
A
GLN
265
A
GLN
265
1
13
6
A
LEU
266
A
LEU
266
HELX_P
A
TYR
273
A
TYR
273
1
14
8
ISOMERASE
CELL WALL, ISOMERASE, CELL SHAPE, UDP- MURNAC-ALA, PEPTIDOGLYCAN BIOSYNTHESIS, GLUTAMATE RACEMASE, PEPTIDOGLYCAN SYNTHESIS
A
PHE
58
A
PHE
58
1
A
PRO
59
A
PRO
59
0.04
MURI_ECOLI
UNP
1
P22634
1
285
2JFN
1
285
P22634
A
1
1
285
4
6
4
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
VAL
111
A
VAL
111
A
VAL
112
A
VAL
112
A
LEU
87
A
LEU
87
A
VAL
90
A
VAL
90
A
ARG
21
A
ARG
21
A
ASP
28
A
ASP
28
A
LYS
247
A
LYS
247
A
SER
248
A
SER
248
A
VAL
111
A
VAL
111
A
VAL
112
A
VAL
112
A
LEU
87
A
LEU
87
A
VAL
90
A
VAL
90
A
ARG
21
A
ARG
21
A
ASP
28
A
ASP
28
A
HIS
48
A
HIS
48
A
PHE
53
A
PHE
53
A
ILE
253
A
ILE
253
A
CYS
256
A
CYS
256
A
THR
277
A
THR
277
A
LYS
280
A
LYS
280
A
GLN
156
A
GLN
156
A
GLY
161
A
GLY
161
A
ILE
129
A
ILE
129
A
ALA
134
A
ALA
134
A
THR
199
A
THR
199
A
LEU
202
A
LEU
202
A
ARG
223
A
ARG
223
A
VAL
225
A
VAL
225
BINDING SITE FOR RESIDUE GLU A1287
Software
13
BINDING SITE FOR RESIDUE UMA A1286
Software
24
A
ASP
28
A
ASP
28
13
1_555
A
SER
29
A
SER
29
13
1_555
A
PHE
58
A
PHE
58
13
1_555
A
PRO
59
A
PRO
59
13
1_555
A
TYR
60
A
TYR
60
13
1_555
A
GLY
61
A
GLY
61
13
1_555
A
CYS
92
A
CYS
92
13
1_555
A
ASN
93
A
ASN
93
13
1_555
A
THR
94
A
THR
94
13
1_555
A
CYS
204
A
CYS
204
13
1_555
A
THR
205
A
THR
205
13
1_555
A
HIS
206
A
HIS
206
13
1_555
A
HOH
2089
D
HOH
13
1_555
A
LEU
100
A
LEU
100
24
1_555
A
ARG
104
A
ARG
104
24
1_555
A
VAL
112
A
VAL
112
24
1_555
A
GLY
113
A
GLY
113
24
1_555
A
VAL
114
A
VAL
114
24
1_555
A
VAL
115
A
VAL
115
24
1_555
A
PRO
116
A
PRO
116
24
1_555
A
ALA
117
A
ALA
117
24
1_555
A
LYS
119
A
LYS
119
24
1_555
A
PRO
120
A
PRO
120
24
1_555
A
SER
227
A
SER
227
24
1_555
A
ALA
230
A
ALA
230
24
1_555
A
ILE
231
A
ILE
231
24
1_555
A
ARG
233
A
ARG
233
24
1_555
A
ARG
234
A
ARG
234
24
1_555
A
HOH
2084
D
HOH
24
1_555
A
HOH
2166
D
HOH
24
1_555
A
HOH
2213
D
HOH
24
1_555
A
HOH
2214
D
HOH
24
1_555
A
HOH
2215
D
HOH
24
1_555
A
HOH
2217
D
HOH
24
1_555
A
HOH
2218
D
HOH
24
1_555
A
HOH
2220
D
HOH
24
1_555
A
HOH
2221
D
HOH
24
1_555
20
C 2 2 21