1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Kuryavyi, V.V. Phan, A.T. Luu, K.N. Patel, D.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking UK Nucleic Acids Res. NARHAD 0389 0305-1048 35 6517 6525 10.1093/nar/gkm706 17895279 Structure of two intramolecular G-quadruplexes formed by natural human telomere sequences in K+ solution 2007 10.2210/pdb2jsm/pdb pdb_00002jsm 7287.690 HUMAN TELOMERE DNA 1 syn polymer no no (DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA) (DG)(DG)(DG) TAGGGTTAGGGTTAGGGTTAGGG A polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Data collection Database references Derived calculations 1 0 2008-07-08 1 1 2011-07-13 1 2 2022-03-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model Human telomere DNA solution structure in the presence of NA cations Tetrahymena telomere DNA solution structure Human telomere DNA crystal structure in the presence of K cations 3 repeats of human telomere DNA solution structurE Human telomere DNA solution structure in the presence of K cations 16BrG Form 1 Human telomere DNA solution structure in the presence of K cations Natural Form 2 HUMAN TELOMERE DNA SOLUTION STRUCTURE IN THE PRESENCE OF K CATIONS FORM 2 15BRG BMRB Y RCSB 2007-07-09 REL REL structures with the lowest energy 50 10 1H-1H NOESY 1H-1H TOCSY 1H- 31P COSY 1H-1H COSY 1H-15N JRHMQC 1H-15N HMBC .5 mM 70 7.0 1 atm 298 K AFTER DEPOSITION, THE MOLECULES WERE ENERGY MINIMIZED WITH THE ENERGY FUNCTION IMPLEMENTING GEOMETRICAL VALUES IN EFFECT AT RCSB SINCE JULY 31 2007. AS A RESULT, STRUCTURE STATISTICS FOR THIS ENTRY SLIGHTLY DEVIATES FROM THE PUBLISHED ONE, AS FOLLOWS (CURRENT VS PUBLISHED): NOE VIOLATIONS (0.3+-0.48) VS (0.00+-0.00) MAXIMUM VIOLATION (0.21+-0.06) VS (0.00+-0.00) RMSD OF VIOLATIONS (0.03+-0.00) VS (0.03+-0.00) BOND LENGTHS (0.004+-0.000) VS (0.004+-0.000) BOND ANGLES (0.71+-0.01) VS (0.92+-0.01) IMPROPERS (0.38+-0.02) VS (0.36+-0.02) PAIRWISE RMSD: ALL ATOMS (0.61+-0.15) VS (0.82+-0.22) ALL ATOMS EXCEPT T6,T7,A8 (0.40+-0.11) VS (0.59+-0.15) torsion angle dynamics 1 0.5-5.0 MM HUMAN TELOMERE DNA, 90% H2O/10% D2O BRUNGER refinement X-PLOR 3.851 structure solution VNMR 6.0 structure solution Felix 2000 structure solution X-PLOR 3.851 600 Varian INOVA 800 Bruker AVANCE DT 1 n 1 DT 1 A DA 2 n 2 DA 2 A DG 3 n 3 DG 3 A DG 4 n 4 DG 4 A DG 5 n 5 DG 5 A DT 6 n 6 DT 6 A DT 7 n 7 DT 7 A DA 8 n 8 DA 8 A DG 9 n 9 DG 9 A DG 10 n 10 DG 10 A DG 11 n 11 DG 11 A DT 12 n 12 DT 12 A DT 13 n 13 DT 13 A DA 14 n 14 DA 14 A DG 15 n 15 DG 15 A DG 16 n 16 DG 16 A DG 17 n 17 DG 17 A DT 18 n 18 DT 18 A DT 19 n 19 DT 19 A DA 20 n 20 DA 20 A DG 21 n 21 DG 21 A DG 22 n 22 DG 22 A DG 23 n 23 DG 23 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 MONOMERIC HUMAN TELOMERE DNA TETRAPLEX WITH 3+1 STRAND FOLD TOPOLOGY, TWO EDGEWISE LOOPS AND DOUBLE-CHAIN REVERSAL LOOP, NMR, 10 STRUCTURES, Form 1 Natural 1 N N hydrog WATSON-CRICK A DT 1 A N3 DT 1 1_555 A DA 20 A N1 DA 20 1_555 hydrog WATSON-CRICK A DT 1 A O4 DT 1 1_555 A DA 20 A N6 DA 20 1_555 hydrog REVERSED HOOGSTEEN A DA 2 A N6 DA 2 1_555 A DT 19 A O2 DT 19 1_555 hydrog REVERSED HOOGSTEEN A DA 2 A N7 DA 2 1_555 A DT 19 A N3 DT 19 1_555 hydrog DA-DA MISPAIR A DA 2 A N6 DA 2 1_555 A DA 20 A N3 DA 20 1_555 hydrog TYPE_6_PAIR A DG 3 A N7 DG 3 1_555 A DG 9 A N2 DG 9 1_555 hydrog TYPE_6_PAIR A DG 3 A O6 DG 3 1_555 A DG 9 A N1 DG 9 1_555 hydrog TYPE_6_PAIR A DG 3 A N1 DG 3 1_555 A DG 21 A O6 DG 21 1_555 hydrog TYPE_6_PAIR A DG 3 A N2 DG 3 1_555 A DG 21 A N7 DG 21 1_555 hydrog TYPE_6_PAIR A DG 4 A N1 DG 4 1_555 A DG 10 A O6 DG 10 1_555 hydrog TYPE_6_PAIR A DG 4 A N2 DG 4 1_555 A DG 10 A N7 DG 10 1_555 hydrog TYPE_6_PAIR A DG 4 A N7 DG 4 1_555 A DG 22 A N2 DG 22 1_555 hydrog TYPE_6_PAIR A DG 4 A O6 DG 4 1_555 A DG 22 A N1 DG 22 1_555 hydrog TYPE_6_PAIR A DG 5 A N1 DG 5 1_555 A DG 11 A O6 DG 11 1_555 hydrog TYPE_6_PAIR A DG 5 A N2 DG 5 1_555 A DG 11 A N7 DG 11 1_555 hydrog TYPE_6_PAIR A DG 5 A N7 DG 5 1_555 A DG 23 A N2 DG 23 1_555 hydrog TYPE_6_PAIR A DG 5 A O6 DG 5 1_555 A DG 23 A N1 DG 23 1_555 hydrog TYPE_6_PAIR A DG 9 A N7 DG 9 1_555 A DG 17 A N2 DG 17 1_555 hydrog TYPE_6_PAIR A DG 9 A O6 DG 9 1_555 A DG 17 A N1 DG 17 1_555 hydrog TYPE_6_PAIR A DG 10 A N1 DG 10 1_555 A DG 16 A O6 DG 16 1_555 hydrog TYPE_6_PAIR A DG 10 A N2 DG 10 1_555 A DG 16 A N7 DG 16 1_555 hydrog TYPE_6_PAIR A DG 11 A N1 DG 11 1_555 A DG 15 A O6 DG 15 1_555 hydrog TYPE_6_PAIR A DG 11 A N2 DG 11 1_555 A DG 15 A N7 DG 15 1_555 hydrog HOOGSTEEN A DT 12 A N3 DT 12 1_555 A DA 14 A N7 DA 14 1_555 hydrog HOOGSTEEN A DT 12 A O4 DT 12 1_555 A DA 14 A N6 DA 14 1_555 hydrog TYPE_6_PAIR A DG 15 A N1 DG 15 1_555 A DG 23 A O6 DG 23 1_555 hydrog TYPE_6_PAIR A DG 15 A N2 DG 15 1_555 A DG 23 A N7 DG 23 1_555 hydrog TYPE_6_PAIR A DG 16 A N1 DG 16 1_555 A DG 22 A O6 DG 22 1_555 hydrog TYPE_6_PAIR A DG 16 A N2 DG 16 1_555 A DG 22 A N7 DG 22 1_555 hydrog TYPE_6_PAIR A DG 17 A N7 DG 17 1_555 A DG 21 A N2 DG 21 1_555 hydrog TYPE_6_PAIR A DG 17 A O6 DG 17 1_555 A DG 21 A N1 DG 21 1_555 DNA G-TETRAD; 3+1 STRAND FOLDING;EDGEWISE, DOUBLE-CHAIN REVERSAL LOOPS; Natural Form 1, 10 STRUCTURES, DNA 2JSM PDB 1 2JSM 1 23 2JSM 1 23 2JSM A 1 1 23 1 P 1