1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
van Nuland, N.A.J.
Ortega, R.J.
Romero Romero, M.
Ab, E.
Ora, A.
Lopez, M.O.
Azuaga, A.I.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
NE
J.Biomol.Nmr
JBNME9
0800
0925-2738
39
331
336
10.1007/s10858-007-9201-7
17922258
The high resolution NMR structure of the third SH3 domain of CD2AP.
2007
10.2210/pdb2jte/pdb
pdb_00002jte
7146.910
CD2-associated protein
SH3 domain, residues 270-329
1
man
polymer
Mesenchyme-to-epithelium transition protein with SH3 domains 1, METS-1
no
no
GAMGAKEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQIS
GAMGAKEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQIS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
sample
Cd2ap, Mets1
10090
Mus musculus
562
Escherichia coli
pETM-11
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Database references
Derived calculations
1
0
2007-12-11
1
1
2011-07-13
1
2
2022-03-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
BMRB
Y
RCSB
2007-07-28
REL
REL
1041
241
394
109
297
structures with the lowest energy
300
20
2D 1H-15N HSQC
3D CBCA(CO)NH
3D HNCACB
3D HNCO
3D HBHA(CO)NH
3D HCCH-TOCSY
3D 1H-15N NOESY
3D 1H-15N TOCSY
3D 1H-15N NOESY
2D 1H-1H NOESY
1
mM
1
mM
[U-98% 15N]
1
mM
[U-98% 13C; U-98% 15N]
1
mM
100
2.0
ambient
298
K
simulated annealing
1
lowest energy
1 mM SH3-C, 1 mM [U-98% 15N] SH3-C, 1 mM [U-98% 13C; U-98% 15N] SH3-C, 90% H2O/10% D2O
90% H2O/10% D2O
1 mM SH3-C, 100% D2O
100% D2O
Guntert, Mumenthaler and Wuthrich
structure solution
CYANA
Brunger, Adams, Clore, Gros, Nilges and Read
refinement
CNS
600
Varian
Uniform NMR System
Varian Uniform NMR System
800
Varian
INOVA
Varian INOVA
GLY
1
n
1
GLY
1
A
ALA
2
n
2
ALA
2
A
MET
3
n
3
MET
3
A
GLY
4
n
4
GLY
4
A
ALA
5
n
5
ALA
5
A
LYS
6
n
6
LYS
6
A
GLU
7
n
7
GLU
7
A
TYR
8
n
8
TYR
8
A
CYS
9
n
9
CYS
9
A
ARG
10
n
10
ARG
10
A
THR
11
n
11
THR
11
A
LEU
12
n
12
LEU
12
A
PHE
13
n
13
PHE
13
A
PRO
14
n
14
PRO
14
A
TYR
15
n
15
TYR
15
A
THR
16
n
16
THR
16
A
GLY
17
n
17
GLY
17
A
THR
18
n
18
THR
18
A
ASN
19
n
19
ASN
19
A
GLU
20
n
20
GLU
20
A
ASP
21
n
21
ASP
21
A
GLU
22
n
22
GLU
22
A
LEU
23
n
23
LEU
23
A
THR
24
n
24
THR
24
A
PHE
25
n
25
PHE
25
A
ARG
26
n
26
ARG
26
A
GLU
27
n
27
GLU
27
A
GLY
28
n
28
GLY
28
A
GLU
29
n
29
GLU
29
A
ILE
30
n
30
ILE
30
A
ILE
31
n
31
ILE
31
A
HIS
32
n
32
HIS
32
A
LEU
33
n
33
LEU
33
A
ILE
34
n
34
ILE
34
A
SER
35
n
35
SER
35
A
LYS
36
n
36
LYS
36
A
GLU
37
n
37
GLU
37
A
THR
38
n
38
THR
38
A
GLY
39
n
39
GLY
39
A
GLU
40
n
40
GLU
40
A
ALA
41
n
41
ALA
41
A
GLY
42
n
42
GLY
42
A
TRP
43
n
43
TRP
43
A
TRP
44
n
44
TRP
44
A
LYS
45
n
45
LYS
45
A
GLY
46
n
46
GLY
46
A
GLU
47
n
47
GLU
47
A
LEU
48
n
48
LEU
48
A
ASN
49
n
49
ASN
49
A
GLY
50
n
50
GLY
50
A
LYS
51
n
51
LYS
51
A
GLU
52
n
52
GLU
52
A
GLY
53
n
53
GLY
53
A
VAL
54
n
54
VAL
54
A
PHE
55
n
55
PHE
55
A
PRO
56
n
56
PRO
56
A
ASP
57
n
57
ASP
57
A
ASN
58
n
58
ASN
58
A
PHE
59
n
59
PHE
59
A
ALA
60
n
60
ALA
60
A
VAL
61
n
61
VAL
61
A
GLN
62
n
62
GLN
62
A
ILE
63
n
63
ILE
63
A
SER
64
n
64
SER
64
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
55
A
O
PHE
55
A
N
TRP
44
A
N
TRP
44
A
O
LYS
45
A
O
LYS
45
A
N
SER
35
A
N
SER
35
A
O
ILE
31
A
O
ILE
31
A
N
CYS
9
A
N
CYS
9
A
N
ARG
10
A
N
ARG
10
A
O
VAL
61
A
O
VAL
61
6
A
A
H1
OE1
GLY
GLU
1
37
1.58
12
A
A
HH
OE1
TYR
GLU
15
22
1.60
20
A
A
H3
OE1
GLY
GLU
1
37
1.59
1
A
LYS
6
80.97
75.50
3
A
ALA
2
42.95
-79.03
3
A
ALA
5
-95.67
-153.95
4
A
ALA
5
-91.02
-68.64
5
A
ALA
5
68.41
-61.58
6
A
LYS
6
-144.05
25.17
7
A
MET
3
60.13
80.92
9
A
ARG
26
-109.84
-167.41
10
A
ALA
2
51.85
-163.11
11
A
ALA
5
-131.42
-55.10
11
A
ASP
57
-68.26
1.43
12
A
ALA
5
-82.99
-78.45
13
A
LYS
6
-110.98
76.37
15
A
MET
3
-166.85
89.99
15
A
LYS
6
66.55
97.56
18
A
ALA
5
-152.18
-73.23
Third SH3 domain of CD2AP
1
N
N
SIGNALING PROTEIN
protein, SH3 domain, Coiled coil, Cytoplasm, Phosphorylation, SH3-binding, SIGNALING PROTEIN
CD2AP_MOUSE
UNP
1
270
Q9JLQ0
AKEYCRTLFPYTGTNEDELTFREGEIIHLISKETGEAGWWKGELNGKEGVFPDNFAVQIS
270
329
2JTE
5
64
Q9JLQ0
A
1
5
64
1
expression tag
GLY
1
2JTE
A
Q9JLQ0
UNP
1
1
expression tag
ALA
2
2JTE
A
Q9JLQ0
UNP
2
1
expression tag
MET
3
2JTE
A
Q9JLQ0
UNP
3
1
expression tag
GLY
4
2JTE
A
Q9JLQ0
UNP
4
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
51
A
LYS
51
A
PRO
56
A
PRO
56
A
TRP
43
A
TRP
43
A
LEU
48
A
LEU
48
A
ILE
30
A
ILE
30
A
SER
35
A
SER
35
A
GLU
7
A
GLU
7
A
THR
11
A
THR
11
A
ALA
60
A
ALA
60
A
SER
64
A
SER
64