1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Denisov, A.Y.
Maattanen, P.
Dabrowski, C.
Kozlov, G.
Thomas, D.Y.
Gehring, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Febs J.
1742-464X
276
1440
1449
10.1111/j.1742-4658.2009.06884.x
19187238
Solution structure of the bb' domains of human protein disulfide isomerase.
2009
10.2210/pdb2k18/pdb
pdb_00002k18
25564.928
Protein disulfide-isomerase
5.3.4.1
residues 135-357
1
man
polymer
PDI, Prolyl 4- hydroxylase subunit beta, Cellular thyroid hormone-binding protein, p55
no
no
GPLGSPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKF
DEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFI
FIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMS
GPLGSPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKF
DEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFI
FIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
P4HB, ERBA2L, PDI, PDIA1, PO4DB
9606
Homo sapiens
511693
Escherichia coli BL21
BL21
plasmid
pGEX-6P1
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Database references
Derived calculations
1
0
2008-04-29
1
1
2011-07-13
1
2
2022-03-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
bb' domains of human PDI
b domain of human PDI
BMRB
Y
RCSB
2008-02-22
REL
REL
Structure was determined using multi-dimentional NMR spectroscopy
structures with the lowest energy and the least restraint violations
200
10
2D 1H-15N HSQC
2D 1H-13C HSQC
3D 1H-15N NOESY
3D 1H-13C NOESY
IPAP-HSQC
2
mM
[U-99% 13C; U-99% 15N]
25
mM
70
mM
0.5
mM
5
mM
2
mM
25
mM
70
mM
0.5
mM
5
mM
0.5
mM
[U-99% 15N]
25
mM
70
mM
0.5
mM
5
mM
12
mg/mL
0.1
7.0
1
atm
303
K
structure was refined by using standard protocol in CNS with restraints from NOE distances, backbone torsions, hydrogen bonds and residual dipolar couplings
simulated annealing
1
lowest energy
2 mM [U-99% 13C; U-99% 15N] hPDI-bb, 25 mM sodium phosphate, 70 mM sodium chloride, 0.5 mM EDTA, 5 mM DTT, 90% H2O/10% D2O
90% H2O/10% D2O
2 mM hPDI-bb, 25 mM sodium phosphate, 70 mM sodium chloride, 0.5 mM EDTA, 5 mM DTT, 100% D2O
100% D2O
0.5 mM [U-99% 15N] hPDI-bb, 25 mM sodium phosphate, 70 mM sodium chloride, 0.5 mM EDTA, 5 mM DTT, 12 mg/mL Pf1 phages, 90% H2O/10% D2O
90% H2O/10% D2O
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
2.0
Bartels et al.
data analysis
XEASY
1.3.13
Brunger, Adams, Clore, Gros, Nilges and Read
refinement
CNS
1.1
Linge, O'Donoghue and Nilges
data analysis
ARIA
1.1
Cornilescu, Delaglio and Bax
data analysis
TALOS
800
Varian
Unity Inova
Varian Unity Inova
600
Bruker
DRX
Bruker DRX
GLY
1
n
1
GLY
1
A
PRO
2
n
2
PRO
2
A
LEU
3
n
3
LEU
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
PRO
6
n
6
PRO
6
A
ALA
7
n
7
ALA
7
A
ALA
8
n
8
ALA
8
A
THR
9
n
9
THR
9
A
THR
10
n
10
THR
10
A
LEU
11
n
11
LEU
11
A
PRO
12
n
12
PRO
12
A
ASP
13
n
13
ASP
13
A
GLY
14
n
14
GLY
14
A
ALA
15
n
15
ALA
15
A
ALA
16
n
16
ALA
16
A
ALA
17
n
17
ALA
17
A
GLU
18
n
18
GLU
18
A
SER
19
n
19
SER
19
A
LEU
20
n
20
LEU
20
A
VAL
21
n
21
VAL
21
A
GLU
22
n
22
GLU
22
A
SER
23
n
23
SER
23
A
SER
24
n
24
SER
24
A
GLU
25
n
25
GLU
25
A
VAL
26
n
26
VAL
26
A
ALA
27
n
27
ALA
27
A
VAL
28
n
28
VAL
28
A
ILE
29
n
29
ILE
29
A
GLY
30
n
30
GLY
30
A
PHE
31
n
31
PHE
31
A
PHE
32
n
32
PHE
32
A
LYS
33
n
33
LYS
33
A
ASP
34
n
34
ASP
34
A
VAL
35
n
35
VAL
35
A
GLU
36
n
36
GLU
36
A
SER
37
n
37
SER
37
A
ASP
38
n
38
ASP
38
A
SER
39
n
39
SER
39
A
ALA
40
n
40
ALA
40
A
LYS
41
n
41
LYS
41
A
GLN
42
n
42
GLN
42
A
PHE
43
n
43
PHE
43
A
LEU
44
n
44
LEU
44
A
GLN
45
n
45
GLN
45
A
ALA
46
n
46
ALA
46
A
ALA
47
n
47
ALA
47
A
GLU
48
n
48
GLU
48
A
ALA
49
n
49
ALA
49
A
ILE
50
n
50
ILE
50
A
ASP
51
n
51
ASP
51
A
ASP
52
n
52
ASP
52
A
ILE
53
n
53
ILE
53
A
PRO
54
n
54
PRO
54
A
PHE
55
n
55
PHE
55
A
GLY
56
n
56
GLY
56
A
ILE
57
n
57
ILE
57
A
THR
58
n
58
THR
58
A
SER
59
n
59
SER
59
A
ASN
60
n
60
ASN
60
A
SER
61
n
61
SER
61
A
ASP
62
n
62
ASP
62
A
VAL
63
n
63
VAL
63
A
PHE
64
n
64
PHE
64
A
SER
65
n
65
SER
65
A
LYS
66
n
66
LYS
66
A
TYR
67
n
67
TYR
67
A
GLN
68
n
68
GLN
68
A
LEU
69
n
69
LEU
69
A
ASP
70
n
70
ASP
70
A
LYS
71
n
71
LYS
71
A
ASP
72
n
72
ASP
72
A
GLY
73
n
73
GLY
73
A
VAL
74
n
74
VAL
74
A
VAL
75
n
75
VAL
75
A
LEU
76
n
76
LEU
76
A
PHE
77
n
77
PHE
77
A
LYS
78
n
78
LYS
78
A
LYS
79
n
79
LYS
79
A
PHE
80
n
80
PHE
80
A
ASP
81
n
81
ASP
81
A
GLU
82
n
82
GLU
82
A
GLY
83
n
83
GLY
83
A
ARG
84
n
84
ARG
84
A
ASN
85
n
85
ASN
85
A
ASN
86
n
86
ASN
86
A
PHE
87
n
87
PHE
87
A
GLU
88
n
88
GLU
88
A
GLY
89
n
89
GLY
89
A
GLU
90
n
90
GLU
90
A
VAL
91
n
91
VAL
91
A
THR
92
n
92
THR
92
A
LYS
93
n
93
LYS
93
A
GLU
94
n
94
GLU
94
A
ASN
95
n
95
ASN
95
A
LEU
96
n
96
LEU
96
A
LEU
97
n
97
LEU
97
A
ASP
98
n
98
ASP
98
A
PHE
99
n
99
PHE
99
A
ILE
100
n
100
ILE
100
A
LYS
101
n
101
LYS
101
A
HIS
102
n
102
HIS
102
A
ASN
103
n
103
ASN
103
A
GLN
104
n
104
GLN
104
A
LEU
105
n
105
LEU
105
A
PRO
106
n
106
PRO
106
A
LEU
107
n
107
LEU
107
A
VAL
108
n
108
VAL
108
A
ILE
109
n
109
ILE
109
A
GLU
110
n
110
GLU
110
A
PHE
111
n
111
PHE
111
A
THR
112
n
112
THR
112
A
GLU
113
n
113
GLU
113
A
GLN
114
n
114
GLN
114
A
THR
115
n
115
THR
115
A
ALA
116
n
116
ALA
116
A
PRO
117
n
117
PRO
117
A
LYS
118
n
118
LYS
118
A
ILE
119
n
119
ILE
119
A
PHE
120
n
120
PHE
120
A
GLY
121
n
121
GLY
121
A
GLY
122
n
122
GLY
122
A
GLU
123
n
123
GLU
123
A
ILE
124
n
124
ILE
124
A
LYS
125
n
125
LYS
125
A
THR
126
n
126
THR
126
A
HIS
127
n
127
HIS
127
A
ILE
128
n
128
ILE
128
A
LEU
129
n
129
LEU
129
A
LEU
130
n
130
LEU
130
A
PHE
131
n
131
PHE
131
A
LEU
132
n
132
LEU
132
A
PRO
133
n
133
PRO
133
A
LYS
134
n
134
LYS
134
A
SER
135
n
135
SER
135
A
VAL
136
n
136
VAL
136
A
SER
137
n
137
SER
137
A
ASP
138
n
138
ASP
138
A
TYR
139
n
139
TYR
139
A
ASP
140
n
140
ASP
140
A
GLY
141
n
141
GLY
141
A
LYS
142
n
142
LYS
142
A
LEU
143
n
143
LEU
143
A
SER
144
n
144
SER
144
A
ASN
145
n
145
ASN
145
A
PHE
146
n
146
PHE
146
A
LYS
147
n
147
LYS
147
A
THR
148
n
148
THR
148
A
ALA
149
n
149
ALA
149
A
ALA
150
n
150
ALA
150
A
GLU
151
n
151
GLU
151
A
SER
152
n
152
SER
152
A
PHE
153
n
153
PHE
153
A
LYS
154
n
154
LYS
154
A
GLY
155
n
155
GLY
155
A
LYS
156
n
156
LYS
156
A
ILE
157
n
157
ILE
157
A
LEU
158
n
158
LEU
158
A
PHE
159
n
159
PHE
159
A
ILE
160
n
160
ILE
160
A
PHE
161
n
161
PHE
161
A
ILE
162
n
162
ILE
162
A
ASP
163
n
163
ASP
163
A
SER
164
n
164
SER
164
A
ASP
165
n
165
ASP
165
A
HIS
166
n
166
HIS
166
A
THR
167
n
167
THR
167
A
ASP
168
n
168
ASP
168
A
ASN
169
n
169
ASN
169
A
GLN
170
n
170
GLN
170
A
ARG
171
n
171
ARG
171
A
ILE
172
n
172
ILE
172
A
LEU
173
n
173
LEU
173
A
GLU
174
n
174
GLU
174
A
PHE
175
n
175
PHE
175
A
PHE
176
n
176
PHE
176
A
GLY
177
n
177
GLY
177
A
LEU
178
n
178
LEU
178
A
LYS
179
n
179
LYS
179
A
LYS
180
n
180
LYS
180
A
GLU
181
n
181
GLU
181
A
GLU
182
n
182
GLU
182
A
CYS
183
n
183
CYS
183
A
PRO
184
n
184
PRO
184
A
ALA
185
n
185
ALA
185
A
VAL
186
n
186
VAL
186
A
ARG
187
n
187
ARG
187
A
LEU
188
n
188
LEU
188
A
ILE
189
n
189
ILE
189
A
THR
190
n
190
THR
190
A
LEU
191
n
191
LEU
191
A
GLU
192
n
192
GLU
192
A
GLU
193
n
193
GLU
193
A
GLU
194
n
194
GLU
194
A
MET
195
n
195
MET
195
A
THR
196
n
196
THR
196
A
LYS
197
n
197
LYS
197
A
TYR
198
n
198
TYR
198
A
LYS
199
n
199
LYS
199
A
PRO
200
n
200
PRO
200
A
GLU
201
n
201
GLU
201
A
SER
202
n
202
SER
202
A
GLU
203
n
203
GLU
203
A
GLU
204
n
204
GLU
204
A
LEU
205
n
205
LEU
205
A
THR
206
n
206
THR
206
A
ALA
207
n
207
ALA
207
A
GLU
208
n
208
GLU
208
A
ARG
209
n
209
ARG
209
A
ILE
210
n
210
ILE
210
A
THR
211
n
211
THR
211
A
GLU
212
n
212
GLU
212
A
PHE
213
n
213
PHE
213
A
CYS
214
n
214
CYS
214
A
HIS
215
n
215
HIS
215
A
ARG
216
n
216
ARG
216
A
PHE
217
n
217
PHE
217
A
LEU
218
n
218
LEU
218
A
GLU
219
n
219
GLU
219
A
GLY
220
n
220
GLY
220
A
LYS
221
n
221
LYS
221
A
ILE
222
n
222
ILE
222
A
LYS
223
n
223
LYS
223
A
PRO
224
n
224
PRO
224
A
HIS
225
n
225
HIS
225
A
LEU
226
n
226
LEU
226
A
MET
227
n
227
MET
227
A
SER
228
n
228
SER
228
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
9
A
N
THR
9
A
O
PHE
55
A
O
PHE
55
A
O
GLY
56
A
O
GLY
56
A
N
GLY
30
A
N
GLY
30
A
N
ILE
29
A
N
ILE
29
A
O
VAL
75
A
O
VAL
75
A
N
LEU
76
A
N
LEU
76
A
O
ASN
85
A
O
ASN
85
A
N
PHE
111
A
N
PHE
111
A
O
PHE
161
A
O
PHE
161
A
O
ILE
160
A
O
ILE
160
A
N
ILE
128
A
N
ILE
128
A
N
LEU
129
A
N
LEU
129
A
O
ARG
187
A
O
ARG
187
A
N
LEU
188
A
N
LEU
188
A
O
TYR
198
A
O
TYR
198
1
A
A
O
H
LEU
ARG
205
209
1.59
1
A
A
O
H
VAL
SER
21
24
1.59
2
A
A
O
H
LEU
ARG
205
209
1.53
3
A
A
O
H
LEU
ARG
205
209
1.60
4
A
A
H
HB3
LYS
LEU
125
191
1.23
4
A
A
O
H
LEU
ARG
205
209
1.56
5
A
A
HB
HG
VAL
LEU
28
76
1.33
5
A
A
HB2
HB3
SER
TYR
135
139
1.33
5
A
A
O
H
LEU
ARG
205
209
1.55
6
A
A
O
H
LEU
ARG
205
209
1.54
7
A
A
O
H
LEU
ARG
205
209
1.55
7
A
A
O
H
VAL
SER
21
24
1.60
8
A
A
HB
HG
VAL
LEU
28
76
1.30
9
A
A
HA
HG1
PHE
THR
31
58
1.31
9
A
A
HE2
HA
PHE
LEU
87
96
1.31
9
A
A
HB2
HD11
ALA
ILE
8
57
1.33
9
A
A
O
H
LEU
ARG
205
209
1.48
10
A
A
HD12
HB3
LEU
ASN
76
85
1.22
10
A
A
HG13
HZ
ILE
PHE
50
55
1.33
10
A
A
HG13
HB3
VAL
PRO
186
200
1.34
10
A
A
O
H
PHE
LEU
64
69
1.59
1
A
PRO
2
-68.86
89.57
1
A
LEU
3
-175.19
148.18
1
A
ASP
72
-51.12
-178.92
1
A
ASP
81
71.96
-127.40
1
A
GLU
123
72.09
80.82
1
A
ILE
124
43.26
92.40
1
A
PRO
133
-62.00
-93.68
1
A
SER
135
83.47
-34.37
1
A
SER
137
91.14
-46.59
1
A
SER
164
-28.86
-46.70
1
A
ASP
165
36.55
47.03
1
A
HIS
166
-51.07
-5.62
1
A
THR
167
-104.86
-68.08
1
A
LYS
179
-131.08
-145.67
1
A
LYS
180
-18.77
-51.66
1
A
GLU
181
-67.18
19.30
1
A
GLU
192
-178.71
-75.47
1
A
PRO
200
-68.97
-179.46
1
A
GLU
201
-159.02
-76.97
1
A
GLU
204
-117.97
-110.54
1
A
THR
206
-33.71
-77.23
1
A
PRO
224
-68.72
-90.57
1
A
HIS
225
64.24
-75.50
2
A
LEU
3
-70.31
-167.93
2
A
SER
59
-135.27
-32.31
2
A
ASP
70
-176.74
29.64
2
A
ASP
81
70.20
-126.23
2
A
GLU
88
-42.90
-72.90
2
A
GLU
123
71.36
82.87
2
A
ILE
124
45.99
96.08
2
A
PRO
133
-58.69
-92.19
2
A
LYS
134
-74.50
-108.29
2
A
SER
135
165.40
-40.25
2
A
SER
137
78.57
-56.40
2
A
SER
164
-29.59
-47.60
2
A
ASP
165
34.54
49.04
2
A
HIS
166
-50.88
-5.01
2
A
THR
167
-107.46
-68.80
2
A
LYS
179
-131.09
-146.28
2
A
LYS
180
-16.10
-57.94
2
A
GLU
181
-66.58
19.67
2
A
GLU
192
-168.01
-78.38
2
A
GLU
194
-173.46
-178.70
2
A
PRO
200
-68.73
-174.37
2
A
GLU
201
-140.68
-46.88
2
A
GLU
204
-134.67
-109.16
2
A
THR
206
-26.19
-70.88
2
A
LYS
221
-57.27
-171.73
2
A
PRO
224
-67.64
-152.69
2
A
HIS
225
-59.40
-171.87
3
A
PRO
2
-71.90
20.61
3
A
VAL
35
-58.67
-9.40
3
A
ASP
72
-54.52
-178.86
3
A
ASP
81
72.25
-132.18
3
A
GLU
123
71.69
84.65
3
A
ILE
124
44.91
96.47
3
A
PRO
133
-71.54
-89.95
3
A
SER
135
67.79
65.43
3
A
SER
137
97.61
-36.95
3
A
SER
164
-28.72
-40.91
3
A
ASP
165
31.63
46.26
3
A
HIS
166
-47.12
-8.92
3
A
THR
167
-102.17
-69.91
3
A
LYS
179
-133.50
-144.84
3
A
LYS
180
-19.04
-49.46
3
A
GLU
192
-178.49
-73.96
3
A
GLU
201
-153.63
-70.00
3
A
GLU
204
-125.62
-113.24
3
A
THR
206
-32.91
-74.34
3
A
LYS
221
-58.16
-177.76
3
A
PRO
224
-66.81
-149.36
4
A
PRO
2
-69.91
70.24
4
A
ASP
70
-162.85
21.93
4
A
ASP
72
-54.52
171.72
4
A
ASP
81
68.96
-127.72
4
A
GLN
104
-87.01
32.02
4
A
PHE
120
-59.08
67.90
4
A
GLU
123
69.37
87.23
4
A
ILE
124
43.95
94.05
4
A
SER
137
-75.52
42.36
4
A
SER
164
-27.27
-45.42
4
A
ASP
165
31.92
46.30
4
A
HIS
166
-48.55
-8.33
4
A
THR
167
-104.78
-68.71
4
A
LYS
179
-126.54
-147.94
4
A
LYS
180
-19.12
-51.11
4
A
GLU
181
-68.88
19.31
4
A
GLU
192
175.92
-163.58
4
A
GLU
201
-164.62
-65.44
4
A
GLU
204
-131.45
-110.01
4
A
THR
206
-36.50
-76.96
4
A
LYS
221
-64.14
-177.45
4
A
PRO
224
-66.92
-162.40
4
A
MET
227
-123.14
-58.82
5
A
PRO
2
-68.00
98.10
5
A
PRO
6
-52.50
97.85
5
A
SER
59
-138.13
-33.21
5
A
ASP
70
-176.80
28.06
5
A
ASP
81
71.13
-128.71
5
A
GLU
123
72.12
83.64
5
A
ILE
124
46.96
96.88
5
A
PRO
133
-58.97
-78.75
5
A
LYS
134
-140.76
-102.55
5
A
SER
135
-178.64
-81.83
5
A
VAL
136
36.05
93.32
5
A
SER
137
88.24
-49.68
5
A
LYS
156
-137.89
-33.81
5
A
SER
164
-28.55
-49.74
5
A
ASP
165
32.87
49.79
5
A
HIS
166
-52.06
-4.82
5
A
THR
167
-107.67
-70.63
5
A
LYS
179
-132.21
-144.49
5
A
LYS
180
-18.12
-55.05
5
A
GLU
181
-66.64
18.89
5
A
MET
195
-58.62
101.08
5
A
PRO
200
-69.13
-176.60
5
A
GLU
201
-152.68
-77.74
5
A
GLU
204
-123.85
-110.14
5
A
THR
206
-29.05
-72.68
5
A
LEU
226
62.73
121.70
6
A
PRO
2
-71.42
43.44
6
A
ASP
72
-55.82
177.14
6
A
ASP
81
72.95
-127.41
6
A
GLU
88
-43.04
-71.97
6
A
GLU
123
71.23
86.16
6
A
ILE
124
48.74
99.04
6
A
PRO
133
-72.66
-81.59
6
A
SER
135
64.35
67.41
6
A
SER
137
99.84
-38.04
6
A
SER
164
-27.92
-46.06
6
A
ASP
165
36.32
49.03
6
A
HIS
166
-49.72
-3.34
6
A
THR
167
-109.33
-68.55
6
A
LYS
179
-128.30
-148.16
6
A
LYS
180
-16.40
-48.42
6
A
GLU
181
-69.67
19.29
6
A
MET
195
-56.13
91.32
6
A
GLU
201
-170.22
-62.66
6
A
GLU
204
-125.26
-113.45
6
A
THR
206
-37.14
-84.53
6
A
LYS
221
-62.36
-171.25
6
A
PRO
224
-66.05
-92.79
6
A
MET
227
-151.44
-75.72
7
A
ASP
72
-50.15
175.68
7
A
ASP
81
70.05
-127.91
7
A
GLU
123
74.11
86.53
7
A
ILE
124
45.99
100.69
7
A
PRO
133
-61.05
-89.14
7
A
LYS
134
-133.22
-103.60
7
A
SER
135
177.99
72.07
7
A
SER
137
79.75
-55.16
7
A
ASP
165
36.60
50.54
7
A
HIS
166
-51.01
-4.98
7
A
THR
167
-107.77
-67.05
7
A
LYS
179
-127.76
-149.40
7
A
LYS
180
-19.25
-51.55
7
A
GLU
181
-65.42
19.72
7
A
GLU
192
-141.28
-109.27
7
A
MET
195
-56.68
102.17
7
A
GLU
201
-165.21
-70.02
7
A
GLU
204
-123.03
-111.68
7
A
THR
206
-33.16
-79.79
8
A
ASP
70
-169.52
26.39
8
A
PHE
80
-120.12
-169.42
8
A
ASP
81
71.12
-125.84
8
A
GLU
123
70.80
86.47
8
A
ILE
124
39.96
99.23
8
A
PRO
133
-60.45
-95.22
8
A
LYS
134
-142.02
-105.56
8
A
SER
137
-54.72
-7.40
8
A
LYS
156
-133.09
-32.50
8
A
SER
164
-29.28
-47.64
8
A
ASP
165
35.31
51.39
8
A
HIS
166
-48.95
-6.47
8
A
THR
167
-105.99
-67.66
8
A
LYS
179
-131.13
-146.19
8
A
LYS
180
-18.77
-52.97
8
A
GLU
181
-65.59
17.82
8
A
GLU
182
-67.56
74.06
8
A
GLU
192
-52.32
-113.05
8
A
GLU
194
-150.88
-132.80
8
A
PRO
200
-67.06
-175.71
8
A
GLU
201
-144.00
-81.86
8
A
GLU
204
-130.46
-113.09
8
A
THR
206
-31.73
-82.29
8
A
PRO
224
-67.84
-175.29
9
A
PRO
6
-52.68
108.93
9
A
ASP
70
-133.38
-33.62
9
A
ASP
72
-57.07
176.47
9
A
ASP
81
70.25
-126.80
9
A
GLU
88
-41.43
-73.08
9
A
GLU
123
71.07
85.88
9
A
ILE
124
43.34
93.71
9
A
LYS
134
-143.63
-109.28
9
A
SER
135
78.73
39.18
9
A
SER
137
115.50
-24.09
9
A
LYS
156
-135.33
-36.31
9
A
SER
164
-27.76
-44.08
9
A
ASP
165
29.26
49.76
9
A
HIS
166
-50.91
-7.69
9
A
THR
167
-103.43
-68.95
9
A
LYS
179
-134.49
-142.70
9
A
LYS
180
-19.44
-54.24
9
A
GLU
181
-67.04
19.08
9
A
GLU
192
176.21
-71.62
9
A
GLU
201
-159.76
-70.05
9
A
GLU
204
-126.83
-116.54
9
A
THR
206
-37.62
-89.55
9
A
LYS
221
-60.79
-175.57
9
A
PRO
224
-64.17
-169.85
9
A
LEU
226
-145.28
-53.53
9
A
MET
227
-140.40
-38.96
10
A
ASP
72
-53.49
-178.95
10
A
ASP
81
74.18
-127.59
10
A
GLU
88
-42.52
-75.26
10
A
GLN
104
-89.78
34.36
10
A
GLU
123
68.20
85.82
10
A
ILE
124
42.29
100.47
10
A
PRO
133
-76.81
-93.33
10
A
LYS
134
-75.21
-76.00
10
A
SER
135
61.50
65.98
10
A
VAL
136
-79.68
-71.77
10
A
ASP
165
33.41
50.30
10
A
HIS
166
-52.60
-4.82
10
A
THR
167
-104.39
-68.45
10
A
LYS
179
-127.58
-151.73
10
A
LYS
180
-16.56
-48.61
10
A
GLU
181
-68.78
19.07
10
A
GLU
192
-146.98
-101.32
10
A
GLU
201
-148.11
-69.76
10
A
GLU
204
-145.07
-107.47
10
A
THR
206
-31.27
-91.83
10
A
HIS
225
67.83
155.99
Solution structure of bb' domains of human protein disulfide isomerase
1
N
N
A
ASP
13
A
ASP
13
HELX_P
A
SER
23
A
SER
23
1
1
11
A
SER
37
A
SER
37
HELX_P
A
ILE
50
A
ILE
50
1
2
14
A
ASN
60
A
ASN
60
HELX_P
A
TYR
67
A
TYR
67
1
3
8
A
THR
92
A
THR
92
HELX_P
A
GLN
104
A
GLN
104
1
4
13
A
GLN
114
A
GLN
114
HELX_P
A
GLY
121
A
GLY
121
1
5
8
A
ASP
138
A
ASP
138
HELX_P
A
PHE
153
A
PHE
153
1
6
16
A
ASN
169
A
ASN
169
HELX_P
A
GLY
177
A
GLY
177
1
7
9
A
LEU
205
A
LEU
205
HELX_P
A
GLU
219
A
GLU
219
1
8
15
ISOMERASE
PDI, endoplasmic reticulum, disulfide bonds, protein folding, Chaperone, Isomerase, Membrane, Redox-active center
PDIA1_HUMAN
UNP
1
135
P07237
PAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAIDDIPFGITSNSDVFSKYQLDKDGVVLFKKFDEGRN
NFEGEVTKENLLDFIKHNQLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSD
HTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMS
135
357
2K18
6
228
P07237
A
1
6
228
1
expression tag
GLY
1
2K18
A
P07237
UNP
1
1
expression tag
PRO
2
2K18
A
P07237
UNP
2
1
expression tag
LEU
3
2K18
A
P07237
UNP
3
1
expression tag
GLY
4
2K18
A
P07237
UNP
4
1
expression tag
SER
5
2K18
A
P07237
UNP
5
5
5
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
A
ALA
8
A
ALA
8
A
THR
10
A
THR
10
A
PHE
55
A
PHE
55
A
THR
58
A
THR
58
A
ALA
27
A
ALA
27
A
PHE
31
A
PHE
31
A
GLY
73
A
GLY
73
A
PHE
77
A
PHE
77
A
ARG
84
A
ARG
84
A
ASN
86
A
ASN
86
A
GLU
110
A
GLU
110
A
PHE
111
A
PHE
111
A
ILE
157
A
ILE
157
A
ASP
163
A
ASP
163
A
THR
126
A
THR
126
A
LEU
132
A
LEU
132
A
ALA
185
A
ALA
185
A
LEU
191
A
LEU
191
A
MET
195
A
MET
195
A
TYR
198
A
TYR
198