1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Rodgers, M.E. Schleif, R.F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proteins PSFGEY 0867 0887-3585 77 202 208 10.1002/prot.22431 19422057 Solution structure of the DNA binding domain of AraC protein. 2009 10.2210/pdb2k9s/pdb pdb_00002k9s 12096.711 Arabinose operon regulatory protein DNA binding domain 1 man polymer no no MDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVG FDDQLYFSRVFKKCTGASPSEFRAGCE MDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVG FDDQLYFSRVFKKCTGASPSEFRAGCE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n K-12 sample araC, b0064, JW0063 83333 Escherichia coli 562 Escherichia coli BL21(DE3) pET24d plasmid pdbx_database_status pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list database_2 pdbx_database_status repository Initial release Version format compliance Data collection Derived calculations Other Database references Other 1 0 2008-11-25 1 1 2011-07-13 1 2 2020-02-19 1 3 2023-06-14 _pdbx_database_status.status_code_cs _pdbx_nmr_spectrometer.model _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data homolog MarA homolog Rob BMRB Y RCSB 2008-10-23 REL REL REL REL structures with the least restraint violations 100 20 3D_13C-SEPARATED_ALI_NOESY 3D_13C-SEPARATED_ARO_NOESY 3D 1H-15N-SEPARATED NOESY 2D 1H-15N HSQC 2D 1H-13C HSQC 3D HNCO 3D HNCA 3D HNCACB 3D HN(CO)CA 3D CBCA(CO)NH 3D HCCH-COSY 3D HCCCONH-TOCSY 3D H_CCCONH-TOCSY 0.5-1.0 mM [U-100% 15N] 0.5-1.0 mM [U-100% 13C; U-100% 15N] 400 6.0 1 atm 298 K torsion angle dynamics 1 closest to the average 0.5-1.0 mM [U-100% 15N] AraC-DBD, 90% H2O/10% D2O 90% H2O/10% D2O 0.5-1.0 mM [U-100% 13C; U-100% 15N] AraC-DBD, 100% D2O 100% D2O P.GUNTERT ET AL. refinement CYANA 2.0 Herrmann, Guntert and Wuthrich structure solution ATNOS-CANDID Cornilescu, Delaglio and Bax structure solution TALOS 800 Varian INOVA VARIAN INOVA 600 Bruker AVANCE Bruker Avance 500 Varian INOVA Varian INOVA 600 Varian INOVA Varian INOVA MET 1 n 1 MET 1 A ASP 2 n 2 ASP 2 A ASN 3 n 3 ASN 3 A ARG 4 n 4 ARG 4 A VAL 5 n 5 VAL 5 A ARG 6 n 6 ARG 6 A GLU 7 n 7 GLU 7 A ALA 8 n 8 ALA 8 A CYS 9 n 9 CYS 9 A GLN 10 n 10 GLN 10 A TYR 11 n 11 TYR 11 A ILE 12 n 12 ILE 12 A SER 13 n 13 SER 13 A ASP 14 n 14 ASP 14 A HIS 15 n 15 HIS 15 A LEU 16 n 16 LEU 16 A ALA 17 n 17 ALA 17 A ASP 18 n 18 ASP 18 A SER 19 n 19 SER 19 A ASN 20 n 20 ASN 20 A PHE 21 n 21 PHE 21 A ASP 22 n 22 ASP 22 A ILE 23 n 23 ILE 23 A ALA 24 n 24 ALA 24 A SER 25 n 25 SER 25 A VAL 26 n 26 VAL 26 A ALA 27 n 27 ALA 27 A GLN 28 n 28 GLN 28 A HIS 29 n 29 HIS 29 A VAL 30 n 30 VAL 30 A CYS 31 n 31 CYS 31 A LEU 32 n 32 LEU 32 A SER 33 n 33 SER 33 A PRO 34 n 34 PRO 34 A SER 35 n 35 SER 35 A ARG 36 n 36 ARG 36 A LEU 37 n 37 LEU 37 A SER 38 n 38 SER 38 A HIS 39 n 39 HIS 39 A LEU 40 n 40 LEU 40 A PHE 41 n 41 PHE 41 A ARG 42 n 42 ARG 42 A GLN 43 n 43 GLN 43 A GLN 44 n 44 GLN 44 A LEU 45 n 45 LEU 45 A GLY 46 n 46 GLY 46 A ILE 47 n 47 ILE 47 A SER 48 n 48 SER 48 A VAL 49 n 49 VAL 49 A LEU 50 n 50 LEU 50 A SER 51 n 51 SER 51 A TRP 52 n 52 TRP 52 A ARG 53 n 53 ARG 53 A GLU 54 n 54 GLU 54 A ASP 55 n 55 ASP 55 A GLN 56 n 56 GLN 56 A ARG 57 n 57 ARG 57 A ILE 58 n 58 ILE 58 A SER 59 n 59 SER 59 A GLN 60 n 60 GLN 60 A ALA 61 n 61 ALA 61 A LYS 62 n 62 LYS 62 A LEU 63 n 63 LEU 63 A LEU 64 n 64 LEU 64 A LEU 65 n 65 LEU 65 A SER 66 n 66 SER 66 A THR 67 n 67 THR 67 A THR 68 n 68 THR 68 A ARG 69 n 69 ARG 69 A MET 70 n 70 MET 70 A PRO 71 n 71 PRO 71 A ILE 72 n 72 ILE 72 A ALA 73 n 73 ALA 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A GLY 76 n 76 GLY 76 A ARG 77 n 77 ARG 77 A ASN 78 n 78 ASN 78 A VAL 79 n 79 VAL 79 A GLY 80 n 80 GLY 80 A PHE 81 n 81 PHE 81 A ASP 82 n 82 ASP 82 A ASP 83 n 83 ASP 83 A GLN 84 n 84 GLN 84 A LEU 85 n 85 LEU 85 A TYR 86 n 86 TYR 86 A PHE 87 n 87 PHE 87 A SER 88 n 88 SER 88 A ARG 89 n 89 ARG 89 A VAL 90 n 90 VAL 90 A PHE 91 n 91 PHE 91 A LYS 92 n 92 LYS 92 A LYS 93 n 93 LYS 93 A CYS 94 n 94 CYS 94 A THR 95 n 95 THR 95 A GLY 96 n 96 GLY 96 A ALA 97 n 97 ALA 97 A SER 98 n 98 SER 98 A PRO 99 n 99 PRO 99 A SER 100 n 100 SER 100 A GLU 101 n 101 GLU 101 A PHE 102 n 102 PHE 102 A ARG 103 n 103 ARG 103 A ALA 104 n 104 ALA 104 A GLY 105 n 105 GLY 105 A CYS 106 n 106 CYS 106 A GLU 107 n 107 GLU 107 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 Solution structure of dna binding domain of E. coli arac 1 N N A ASP 2 A ASP 2 HELX_P A HIS 15 A HIS 15 1 1 14 A ASP 22 A ASP 22 HELX_P A VAL 30 A VAL 30 1 2 9 A SER 33 A SER 33 HELX_P A GLY 46 A GLY 46 1 3 14 A SER 48 A SER 48 HELX_P A THR 68 A THR 68 1 4 21 A PRO 71 A PRO 71 HELX_P A VAL 79 A VAL 79 1 5 9 A ASP 83 A ASP 83 HELX_P A GLY 96 A GLY 96 1 6 14 A SER 98 A SER 98 HELX_P A GLY 105 A GLY 105 1 7 8 TRANSCRIPTION Activator, Arabinose catabolism, Carbohydrate metabolism, Cytoplasm, DNA-binding, Repressor, Transcription, Transcription regulation ARAC_ECOLI UNP 1 175 P0A9E0 MDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVG FDDQLYFSRVFKKCTGASPSEFRAGCE 175 281 2K9S 1 107 P0A9E0 A 1 1 107