1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Gallopin, M. Gilquin, B. Zinn-Justin, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 106 8507 8512 10.1073/pnas.0812407106 19433794 Structure of bacteriophage SPP1 head-to-tail connection reveals mechanism for viral DNA gating. 2009 10.2210/pdb2kca/pdb pdb_00002kca 12615.069 Bacteriophage SPP1 complete nucleotide sequence P40R 1 man polymer no no MYEEFRDVITFQSYVEQSNGEGGKTYKWVDEFTAAAHVQPISQEEYYKAQQLQTPIGYNIYTPYDDRIDKKMRVIYRGKI VTFIGDPVDLSGLQEITRIKGKEDGAYVG MYEEFRDVITFQSYVEQSNGEGGKTYKWVDEFTAAAHVQPISQEEYYKAQQLQTPIGYNIYTPYDDRIDKKMRVIYRGKI VTFIGDPVDLSGLQEITRIKGKEDGAYVG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacteriophage SPP1 sample 10724 Bacillus phage SPP1 562 Escherichia coli BL21 DE3 pLysS database_2 pdbx_nmr_software struct_ref_seq_dif repository Initial release Version format compliance Structure summary Data collection Database references 1 0 2009-06-02 1 1 2011-07-13 1 2 2016-08-17 1 3 2021-10-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _struct_ref_seq_dif.details BMRB Y RCSB 2008-12-18 REL REL structures with the lowest energy 6000 20 1H-2H exchange experiments 3D HNHA 2D 1H-15N HSQC 3D 1H-15N NOESY 1H-15N nOe transfer 3D HNCO 3D HNCA 3D HNCACO 3D HNCACB 3D CBCA(CO)NH 3D HBHA(CO)NH 3D HCCH-COSY 3D HCCH-TOCSY 3D 1H-13C NOESY HNCACB HNCACO HNCOCACB 0.35 mM 5 mM 300 mM 0.35 mM [U-100% 15N] 5 mM 300 mM 0.35 mM [U-100% 13C; U-100% 15N] 5 mM 300 mM 0.35 mM [U-100% 13C; U-100% 15N; U-80% 2H] 5 mM 300 mM 0.3 7.5 ambient atm 298 K molecular dynamics 1 lowest energy 0.35 mM gp16-1, 5 mM HEPES-2, 300 mM sodium chloride-3, 90% H2O/10% D2O 90% H2O/10% D2O 0.35 mM [U-100% 15N] gp16-4, 5 mM HEPES-5, 300 mM sodium chloride-6, 90% H2O/10% D2O 90% H2O/10% D2O 0.35 mM [U-100% 13C; U-100% 15N] gp16-7, 5 mM HEPES-8, 300 mM sodium chloride-9, 90% H2O/10% D2O 90% H2O/10% D2O 0.35 mM [U-100% 13C; U-100% 15N; U-80% 2H] gp16-10, 5 mM HEPES-11, 300 mM sodium chloride-12, 90% H2O/10% D2O 90% H2O/10% D2O Goddard peak picking Sparky Brunger, Adams, Clore, Gros, Nilges and Read structure solution CNS Bernard Gilquin chemical shift assignment INCA Brunger, Adams, Clore, Gros, Nilges and Read refinement CNS 600 Bruker Avance 2 Bruker Avance 2 700 Bruker Avance 2 Bruker Avance 2 MET 35 n 1 MET 35 A TYR 36 n 2 TYR 36 A GLU 37 n 3 GLU 37 A GLU 38 n 4 GLU 38 A PHE 39 n 5 PHE 39 A ARG 40 n 6 ARG 40 A ASP 41 n 7 ASP 41 A VAL 42 n 8 VAL 42 A ILE 43 n 9 ILE 43 A THR 44 n 10 THR 44 A PHE 45 n 11 PHE 45 A GLN 46 n 12 GLN 46 A SER 47 n 13 SER 47 A TYR 48 n 14 TYR 48 A VAL 49 n 15 VAL 49 A GLU 50 n 16 GLU 50 A GLN 51 n 17 GLN 51 A SER 52 n 18 SER 52 A ASN 53 n 19 ASN 53 A GLY 54 n 20 GLY 54 A GLU 55 n 21 GLU 55 A GLY 56 n 22 GLY 56 A GLY 57 n 23 GLY 57 A LYS 58 n 24 LYS 58 A THR 59 n 25 THR 59 A TYR 60 n 26 TYR 60 A LYS 61 n 27 LYS 61 A TRP 62 n 28 TRP 62 A VAL 63 n 29 VAL 63 A ASP 64 n 30 ASP 64 A GLU 65 n 31 GLU 65 A PHE 66 n 32 PHE 66 A THR 67 n 33 THR 67 A ALA 68 n 34 ALA 68 A ALA 69 n 35 ALA 69 A ALA 70 n 36 ALA 70 A HIS 71 n 37 HIS 71 A VAL 72 n 38 VAL 72 A GLN 73 n 39 GLN 73 A PRO 74 n 40 PRO 74 A ILE 75 n 41 ILE 75 A SER 76 n 42 SER 76 A GLN 77 n 43 GLN 77 A GLU 78 n 44 GLU 78 A GLU 79 n 45 GLU 79 A TYR 80 n 46 TYR 80 A TYR 81 n 47 TYR 81 A LYS 82 n 48 LYS 82 A ALA 83 n 49 ALA 83 A GLN 84 n 50 GLN 84 A GLN 85 n 51 GLN 85 A LEU 86 n 52 LEU 86 A GLN 87 n 53 GLN 87 A THR 88 n 54 THR 88 A PRO 89 n 55 PRO 89 A ILE 90 n 56 ILE 90 A GLY 91 n 57 GLY 91 A TYR 92 n 58 TYR 92 A ASN 93 n 59 ASN 93 A ILE 94 n 60 ILE 94 A TYR 95 n 61 TYR 95 A THR 96 n 62 THR 96 A PRO 97 n 63 PRO 97 A TYR 98 n 64 TYR 98 A ASP 99 n 65 ASP 99 A ASP 100 n 66 ASP 100 A ARG 101 n 67 ARG 101 A ILE 102 n 68 ILE 102 A ASP 103 n 69 ASP 103 A LYS 104 n 70 LYS 104 A LYS 105 n 71 LYS 105 A MET 106 n 72 MET 106 A ARG 107 n 73 ARG 107 A VAL 108 n 74 VAL 108 A ILE 109 n 75 ILE 109 A TYR 110 n 76 TYR 110 A ARG 111 n 77 ARG 111 A GLY 112 n 78 GLY 112 A LYS 113 n 79 LYS 113 A ILE 114 n 80 ILE 114 A VAL 115 n 81 VAL 115 A THR 116 n 82 THR 116 A PHE 117 n 83 PHE 117 A ILE 118 n 84 ILE 118 A GLY 119 n 85 GLY 119 A ASP 120 n 86 ASP 120 A PRO 121 n 87 PRO 121 A VAL 122 n 88 VAL 122 A ASP 123 n 89 ASP 123 A LEU 124 n 90 LEU 124 A SER 125 n 91 SER 125 A GLY 126 n 92 GLY 126 A LEU 127 n 93 LEU 127 A GLN 128 n 94 GLN 128 A GLU 129 n 95 GLU 129 A ILE 130 n 96 ILE 130 A THR 131 n 97 THR 131 A ARG 132 n 98 ARG 132 A ILE 133 n 99 ILE 133 A LYS 134 n 100 LYS 134 A GLY 135 n 101 GLY 135 A LYS 136 n 102 LYS 136 A GLU 137 n 103 GLU 137 A ASP 138 n 104 ASP 138 A GLY 139 n 105 GLY 139 A ALA 140 n 106 ALA 140 A TYR 141 n 107 TYR 141 A VAL 142 n 108 VAL 142 A GLY 143 n 109 GLY 143 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 47 A N SER 13 A O VAL 63 A O VAL 29 A N GLN 73 A N GLN 39 A O ASN 93 A O ASN 59 A N ILE 94 A N ILE 60 A O ILE 133 A O ILE 99 A O ARG 132 A O ARG 98 A N VAL 122 A N VAL 88 A O LYS 113 A O LYS 79 A N TYR 110 A N TYR 76 A O ILE 109 A O ILE 75 A N THR 44 A N THR 10 1 A A HH OE1 TYR GLN 98 128 1.59 2 A A HH O TYR GLN 81 85 1.59 6 A A HH OD1 TYR ASN 80 93 1.58 10 A A O HH GLY TYR 57 60 1.57 11 A A O HG1 VAL THR 115 116 1.54 12 A A OD1 HG1 ASN THR 53 59 1.59 13 A A OE1 HH GLN TYR 84 92 1.54 15 A A O HG1 ASP THR 99 131 1.58 19 A A O HG1 ALA THR 83 88 1.57 20 A A O HH GLU TYR 38 95 1.57 20 A A HG OD1 SER ASN 76 93 1.59 1 A TYR 36 0.086 SIDE CHAIN 1 A TYR 95 0.148 SIDE CHAIN 1 A TYR 110 0.221 SIDE CHAIN 2 A TYR 92 0.140 SIDE CHAIN 2 A TYR 95 0.128 SIDE CHAIN 3 A TYR 60 0.080 SIDE CHAIN 3 A TYR 80 0.082 SIDE CHAIN 3 A TYR 92 0.086 SIDE CHAIN 3 A TYR 110 0.166 SIDE CHAIN 4 A TYR 110 0.076 SIDE CHAIN 5 A TYR 81 0.095 SIDE CHAIN 5 A TYR 95 0.109 SIDE CHAIN 6 A TYR 60 0.092 SIDE CHAIN 6 A TYR 95 0.089 SIDE CHAIN 6 A TYR 110 0.101 SIDE CHAIN 7 A TYR 80 0.069 SIDE CHAIN 7 A TYR 81 0.079 SIDE CHAIN 7 A TYR 92 0.066 SIDE CHAIN 7 A TYR 95 0.143 SIDE CHAIN 9 A TYR 60 0.081 SIDE CHAIN 9 A TYR 92 0.099 SIDE CHAIN 9 A TYR 95 0.084 SIDE CHAIN 10 A TYR 60 0.091 SIDE CHAIN 10 A TYR 92 0.070 SIDE CHAIN 10 A TYR 95 0.075 SIDE CHAIN 11 A TYR 60 0.079 SIDE CHAIN 11 A TYR 110 0.159 SIDE CHAIN 12 A PHE 66 0.095 SIDE CHAIN 12 A ARG 101 0.125 SIDE CHAIN 12 A TYR 110 0.076 SIDE CHAIN 13 A TYR 95 0.109 SIDE CHAIN 13 A TYR 110 0.179 SIDE CHAIN 14 A TYR 92 0.113 SIDE CHAIN 14 A TYR 95 0.133 SIDE CHAIN 15 A PHE 66 0.112 SIDE CHAIN 15 A TYR 92 0.162 SIDE CHAIN 16 A PHE 117 0.078 SIDE CHAIN 17 A TYR 92 0.107 SIDE CHAIN 18 A PHE 66 0.079 SIDE CHAIN 19 A PHE 66 0.100 SIDE CHAIN 19 A TYR 95 0.075 SIDE CHAIN 20 A TYR 95 0.069 SIDE CHAIN 1 -5.42 0.60 121.00 115.58 A A A CB CG CD1 TYR TYR TYR 110 110 110 N 1 -5.53 0.70 120.80 115.27 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 1 6.52 0.70 120.80 127.32 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 2 -5.74 0.70 120.80 115.06 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 2 7.12 0.70 120.80 127.92 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 2 9.26 1.50 110.50 119.76 A A A N CA CB SER SER SER 125 125 125 N 3 3.84 0.60 121.00 124.84 A A A CB CG CD1 TYR TYR TYR 98 98 98 N 3 -4.72 0.60 121.00 116.28 A A A CB CG CD1 TYR TYR TYR 110 110 110 N 3 -4.95 0.70 120.80 115.85 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 3 5.87 0.70 120.80 126.67 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 4 -3.88 0.60 121.00 117.12 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 4 3.72 0.60 121.00 124.72 A A A CB CG CD1 TYR TYR TYR 92 92 92 N 4 -4.44 0.70 120.80 116.36 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 4 5.68 0.70 120.80 126.48 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 5 5.38 0.70 120.80 126.18 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 6 -4.06 0.60 121.00 116.94 A A A CB CG CD2 TYR TYR TYR 80 80 80 N 6 3.77 0.60 121.00 124.77 A A A CB CG CD1 TYR TYR TYR 80 80 80 N 6 -4.52 0.60 121.00 116.48 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 6 15.62 2.50 121.70 137.32 A A A C N CA PRO TYR TYR 97 98 98 Y 6 -4.68 0.70 120.80 116.12 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 6 6.16 0.70 120.80 126.96 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 7 9.06 1.50 110.90 119.96 A A A CA CB CG1 VAL VAL VAL 72 72 72 N 7 -4.18 0.60 121.00 116.82 A A A CB CG CD2 TYR TYR TYR 80 80 80 N 7 3.89 0.60 121.00 124.89 A A A CB CG CD1 TYR TYR TYR 80 80 80 N 7 15.40 2.50 121.70 137.10 A A A C N CA PRO TYR TYR 97 98 98 Y 8 12.65 1.50 110.90 123.55 A A A CA CB CG1 VAL VAL VAL 72 72 72 N 8 -5.37 0.70 120.80 115.43 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 8 6.69 0.70 120.80 127.49 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 9 16.17 2.50 121.70 137.87 A A A C N CA PRO TYR TYR 97 98 98 Y 9 5.26 0.70 120.80 126.06 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 10 12.67 1.50 110.90 123.57 A A A CA CB CG1 VAL VAL VAL 72 72 72 N 10 -3.68 0.60 121.00 117.32 A A A CB CG CD1 TYR TYR TYR 110 110 110 N 10 -4.49 0.70 120.80 116.31 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 10 5.13 0.70 120.80 125.93 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 11 4.55 0.60 121.00 125.55 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 11 -5.87 0.60 121.00 115.13 A A A CB CG CD1 TYR TYR TYR 92 92 92 N 12 -10.13 1.60 110.90 100.77 A A A CG1 CB CG2 VAL VAL VAL 72 72 72 N 12 11.61 1.50 110.90 122.51 A A A CA CB CG2 VAL VAL VAL 72 72 72 N 12 -4.28 0.60 121.00 116.72 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 12 5.66 0.60 121.00 126.66 A A A CB CG CD1 TYR TYR TYR 92 92 92 N 12 -6.81 0.70 120.80 113.99 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 12 7.69 0.70 120.80 128.49 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 13 9.75 1.50 110.50 120.25 A A A N CA CB SER SER SER 52 52 52 N 13 -7.08 0.60 121.00 113.92 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 13 6.70 0.60 121.00 127.70 A A A CB CG CD1 TYR TYR TYR 92 92 92 N 14 9.85 1.50 110.50 120.35 A A A N CA CB SER SER SER 76 76 76 N 14 -5.37 0.70 120.80 115.43 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 14 6.34 0.70 120.80 127.14 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 15 4.76 0.70 120.80 125.56 A A A CB CG CD2 PHE PHE PHE 45 45 45 N 15 10.02 1.50 110.90 120.92 A A A CA CB CG1 VAL VAL VAL 72 72 72 N 15 -3.72 0.60 121.00 117.28 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 15 15.33 2.50 121.70 137.03 A A A C N CA PRO TYR TYR 97 98 98 Y 16 -4.20 0.60 121.00 116.80 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 16 4.75 0.60 121.00 125.75 A A A CB CG CD1 TYR TYR TYR 92 92 92 N 16 15.53 2.50 121.70 137.23 A A A C N CA PRO TYR TYR 97 98 98 Y 17 -5.81 0.60 121.00 115.19 A A A CB CG CD1 TYR TYR TYR 92 92 92 N 17 4.34 0.70 120.80 125.14 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 18 -4.57 0.60 121.00 116.43 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 18 5.87 0.60 121.00 126.87 A A A CB CG CD1 TYR TYR TYR 92 92 92 N 18 17.02 2.70 111.00 128.02 A A A N CA C THR THR THR 116 116 116 N 19 -4.66 0.60 121.00 116.34 A A A CB CG CD2 TYR TYR TYR 92 92 92 N 19 16.84 2.50 121.70 138.54 A A A C N CA PRO TYR TYR 97 98 98 Y 19 -3.94 0.60 121.00 117.06 A A A CB CG CD2 TYR TYR TYR 98 98 98 N 19 3.75 0.60 121.00 124.75 A A A CB CG CD1 TYR TYR TYR 98 98 98 N 20 11.85 1.50 110.90 122.75 A A A CA CB CG2 VAL VAL VAL 72 72 72 N 20 -3.77 0.60 121.00 117.23 A A A CB CG CD2 TYR TYR TYR 110 110 110 N 20 -4.89 0.70 120.80 115.91 A A A CB CG CD2 PHE PHE PHE 117 117 117 N 20 6.08 0.70 120.80 126.88 A A A CB CG CD1 PHE PHE PHE 117 117 117 N 1 A GLU 37 71.50 -73.85 1 A GLN 51 99.00 139.88 1 A SER 52 -95.36 45.43 1 A LYS 58 67.81 -64.42 1 A GLU 65 -99.30 -60.71 1 A SER 76 81.05 -59.75 1 A GLN 77 -147.87 -112.69 1 A GLU 79 74.55 -47.52 1 A TYR 81 65.81 -81.96 1 A LYS 82 48.34 -57.35 1 A ALA 83 -92.95 -61.60 1 A GLN 84 146.90 -121.85 1 A GLN 85 87.17 156.65 1 A TYR 98 32.12 19.35 1 A LYS 104 178.02 42.88 1 A LYS 105 79.46 80.03 1 A SER 125 94.72 -160.58 1 A GLN 128 76.59 64.42 1 A ASP 138 -131.31 -98.63 1 A ALA 140 -152.65 84.70 1 A TYR 141 68.93 -77.35 2 A TYR 36 97.43 -77.02 2 A LYS 58 -110.40 64.10 2 A ILE 75 -33.85 58.13 2 A GLN 77 119.86 -150.33 2 A GLU 79 70.28 -83.25 2 A GLN 85 88.68 45.13 2 A TYR 98 46.46 -5.76 2 A ILE 102 -47.41 -72.94 2 A LYS 104 103.00 77.23 2 A LYS 105 81.23 21.71 2 A SER 125 102.94 -112.89 2 A LEU 127 -150.19 -59.04 2 A GLN 128 -101.22 -126.81 2 A ASP 138 77.10 -65.05 2 A ALA 140 -102.41 57.24 3 A TYR 36 -72.61 30.67 3 A GLU 37 -162.14 40.12 3 A ASN 53 101.63 -71.36 3 A ILE 75 -70.32 32.90 3 A SER 76 169.45 107.11 3 A TYR 81 -166.00 -162.64 3 A GLN 87 80.86 -67.24 3 A ILE 90 -1.77 81.63 3 A TYR 98 34.51 2.42 3 A LYS 104 -165.96 53.28 3 A LYS 105 76.75 69.02 3 A SER 125 -24.09 86.96 3 A ASP 138 -171.18 -161.55 4 A GLU 37 86.90 -17.06 4 A GLU 38 84.39 43.44 4 A GLN 51 68.21 -55.08 4 A SER 52 106.94 13.32 4 A GLU 55 81.91 -40.12 4 A GLU 65 -100.80 -61.65 4 A GLN 77 -127.23 -116.34 4 A GLU 79 77.47 74.87 4 A TYR 81 97.76 174.61 4 A ALA 83 -74.87 29.73 4 A LEU 86 -154.97 83.03 4 A ILE 90 86.88 114.60 4 A TYR 98 28.32 16.56 4 A ASP 100 -99.80 31.81 4 A ILE 102 -9.31 -67.43 4 A LYS 104 -147.95 -83.90 4 A SER 125 173.52 -45.32 4 A LEU 127 70.76 -92.11 4 A GLU 129 80.55 56.67 4 A ASP 138 53.20 -85.38 4 A ALA 140 82.17 -62.72 5 A GLU 38 68.96 -53.45 5 A GLU 65 -98.19 -68.29 5 A ILE 75 -65.38 64.83 5 A SER 76 -55.93 96.61 5 A GLU 79 64.87 -42.56 5 A LYS 82 79.97 30.88 5 A GLN 84 -96.70 48.37 5 A TYR 98 31.69 -1.78 5 A ASP 100 -87.81 48.20 5 A ILE 102 8.70 -82.95 5 A LYS 104 -175.27 43.40 5 A LYS 105 81.55 56.61 5 A GLN 128 144.55 125.78 6 A SER 52 107.06 -146.20 6 A ASN 53 -140.97 51.40 6 A GLU 55 60.48 -65.06 6 A ILE 75 56.44 -48.17 6 A GLU 79 -153.02 65.87 6 A TYR 80 -96.78 -68.05 6 A GLN 84 -62.91 69.34 6 A GLN 85 89.18 29.84 6 A ILE 90 -146.38 39.40 6 A TYR 98 10.45 18.08 6 A ILE 102 -12.51 -70.11 6 A LYS 104 -169.04 43.57 6 A LYS 105 84.10 82.81 6 A ASP 138 -157.36 37.32 6 A TYR 141 -149.20 -57.86 7 A GLU 50 -126.82 -89.06 7 A GLN 51 64.83 -53.83 7 A SER 52 100.95 -16.15 7 A ILE 75 74.66 123.84 7 A GLN 77 -101.49 -60.04 7 A TYR 81 73.85 -83.86 7 A GLN 84 64.35 -81.36 7 A GLN 85 -156.72 -62.25 7 A ILE 90 132.29 104.83 7 A TYR 98 -8.48 27.88 7 A ILE 102 -13.13 -68.34 7 A LYS 104 -174.14 39.96 7 A LYS 105 84.46 73.92 7 A SER 125 80.06 -58.75 7 A LEU 127 59.11 -67.05 7 A GLU 129 75.93 64.96 7 A VAL 142 -99.11 53.48 8 A TYR 36 72.95 -54.25 8 A ARG 40 -173.51 -95.88 8 A SER 52 89.38 -61.11 8 A GLU 55 -162.57 68.04 8 A SER 76 -61.18 9.19 8 A GLU 79 -133.32 -34.95 8 A TYR 81 75.47 31.12 8 A ALA 83 -92.47 30.03 8 A GLN 85 79.34 -47.57 8 A ILE 90 -36.36 115.69 8 A TYR 98 18.82 19.07 8 A ILE 102 -13.70 -71.21 8 A LYS 104 -173.18 55.89 8 A LYS 105 82.72 62.64 8 A SER 125 -169.07 -159.71 8 A LEU 127 -133.58 -55.99 8 A GLU 129 -64.77 59.23 8 A TYR 141 81.13 51.84 9 A TYR 36 -128.73 -138.21 9 A ASN 53 105.01 175.42 9 A ILE 75 43.79 -79.57 9 A SER 76 -166.14 39.81 9 A GLN 77 53.89 -61.23 9 A GLU 79 90.46 135.55 9 A GLN 84 94.72 108.39 9 A GLN 87 -86.82 -80.92 9 A TYR 98 6.01 22.99 9 A ILE 102 -68.28 -73.13 9 A LYS 104 -143.58 -71.33 9 A LYS 105 -162.98 77.75 9 A SER 125 70.69 -66.21 9 A GLN 128 -44.85 19.72 10 A PHE 39 -96.07 45.41 10 A SER 52 172.64 116.68 10 A ILE 75 -60.24 91.65 10 A SER 76 83.71 -55.15 10 A GLU 79 67.97 -38.64 10 A TYR 81 -117.22 -76.43 10 A GLN 84 64.47 -94.51 10 A GLN 85 -173.09 72.37 10 A LEU 86 76.38 -52.60 10 A TYR 98 33.55 137.44 10 A ASP 99 -58.88 90.22 10 A ASP 100 -101.55 -124.84 10 A ILE 102 71.01 -83.92 10 A LYS 104 94.91 56.71 10 A LYS 105 80.26 38.78 10 A GLN 128 74.01 -173.30 10 A GLU 129 77.37 -108.40 10 A VAL 142 68.37 -56.33 11 A GLU 38 54.53 -41.56 11 A PHE 39 -109.95 42.00 11 A GLU 50 -100.09 62.23 11 A SER 52 -156.43 -137.68 11 A ILE 75 -145.73 -61.99 11 A SER 76 69.84 -18.10 11 A GLN 77 -60.38 64.43 11 A GLU 79 82.42 108.58 11 A TYR 81 124.53 -37.17 11 A LEU 86 -119.38 51.28 11 A GLN 87 69.18 -52.17 11 A TYR 98 34.99 17.58 11 A ILE 102 -0.90 -71.89 11 A LYS 104 178.22 56.03 11 A LYS 105 73.37 50.79 11 A THR 116 120.85 -118.77 11 A PHE 117 90.59 -80.75 11 A LEU 127 -101.94 -68.42 11 A GLU 129 94.61 -77.87 11 A ASP 138 79.89 110.32 11 A TYR 141 -140.81 47.88 12 A GLU 37 -134.03 -80.23 12 A PHE 39 112.50 -174.13 12 A SER 76 -142.94 -119.03 12 A TYR 81 -79.17 47.02 12 A GLN 84 -145.43 30.59 12 A TYR 98 51.26 -166.99 12 A ASP 100 -137.91 -67.70 12 A ILE 102 -6.89 109.83 12 A LYS 104 -112.35 -106.69 12 A MET 106 -165.45 -169.09 12 A SER 125 114.40 -123.24 12 A LEU 127 80.02 -53.75 12 A ASP 138 -163.52 -52.25 12 A ALA 140 -150.80 -78.01 12 A TYR 141 65.34 -82.05 13 A GLU 38 80.97 -81.99 13 A PHE 39 -100.07 -71.52 13 A SER 52 120.92 -74.50 13 A ASN 53 65.53 -128.92 13 A LYS 58 -87.09 -76.97 13 A GLU 78 -45.73 -18.05 13 A LYS 82 93.28 104.78 13 A GLN 84 -168.36 107.04 13 A LEU 86 -57.52 41.27 13 A GLN 87 -138.92 -36.19 13 A ILE 90 -86.93 -104.51 13 A TYR 98 20.69 17.41 13 A ILE 102 -58.68 -72.08 13 A LYS 104 131.59 55.92 13 A LYS 105 89.95 50.74 13 A PHE 117 64.41 -67.56 13 A GLU 129 -107.44 -107.11 14 A ARG 40 -148.79 42.79 14 A GLN 51 77.85 68.63 14 A SER 52 -141.99 55.04 14 A LYS 58 -117.46 54.16 14 A ILE 75 73.45 -141.79 14 A SER 76 167.00 -148.45 14 A LYS 82 73.92 52.60 14 A GLN 87 86.18 75.16 14 A ILE 90 -41.97 154.15 14 A TYR 98 20.29 26.88 14 A LYS 104 -169.61 57.62 14 A LYS 105 72.50 65.25 14 A ILE 118 -81.23 -71.53 14 A ASP 120 -162.57 79.03 14 A GLN 128 85.40 -13.54 14 A GLU 129 -83.78 -130.45 14 A ALA 140 73.67 -19.16 15 A TYR 36 -93.64 56.49 15 A GLU 38 -73.74 43.48 15 A PHE 39 91.58 -91.98 15 A GLU 50 -88.50 -103.69 15 A GLN 51 97.49 152.20 15 A SER 52 -90.83 57.16 15 A GLU 65 -91.65 -63.13 15 A ILE 75 -84.18 32.95 15 A GLN 77 -79.23 -121.66 15 A TYR 81 79.13 -176.83 15 A LYS 82 -94.74 -74.58 15 A ALA 83 -72.57 30.05 15 A TYR 98 19.64 20.42 15 A ASP 100 -110.24 64.33 15 A LYS 105 79.32 53.87 15 A SER 125 176.91 -171.01 15 A GLN 128 74.67 56.07 15 A GLU 129 -104.82 -112.27 15 A VAL 142 61.01 -56.24 16 A GLU 37 -119.42 -95.31 16 A ARG 40 -150.87 43.38 16 A GLU 50 -144.21 -53.54 16 A LYS 58 -100.42 55.55 16 A GLU 79 69.66 -62.46 16 A TYR 80 -96.88 -63.79 16 A TYR 81 -158.24 -55.88 16 A ALA 83 -59.67 30.81 16 A GLN 84 93.08 141.75 16 A TYR 98 10.24 19.81 16 A ILE 102 7.35 -77.84 16 A LYS 104 -142.08 -70.64 16 A LYS 105 -173.55 53.87 16 A MET 106 -157.70 -148.14 16 A SER 125 -30.89 20.20 16 A ASP 138 -146.41 -135.98 17 A TYR 36 -143.74 -81.22 17 A SER 52 -163.57 -169.99 17 A GLU 55 62.38 -83.66 17 A LYS 58 74.48 62.12 17 A ILE 75 64.67 -165.12 17 A GLU 79 67.32 -59.29 17 A GLN 84 82.82 42.45 17 A GLN 85 -75.03 37.90 17 A LEU 86 78.54 -161.07 17 A ILE 90 72.52 81.67 17 A TYR 98 2.43 22.11 17 A LYS 104 168.63 60.83 17 A LYS 105 76.06 48.45 17 A SER 125 91.88 -94.69 17 A GLN 128 93.30 126.52 17 A GLU 129 -69.50 52.52 17 A ASP 138 -101.38 56.06 17 A ALA 140 71.96 -64.53 17 A TYR 141 -103.24 71.46 18 A TYR 36 79.17 43.07 18 A GLU 37 -82.40 47.25 18 A GLU 38 -134.45 -112.03 18 A SER 52 75.33 46.27 18 A LYS 58 30.26 -28.02 18 A ILE 75 -51.56 102.09 18 A SER 76 -105.98 -101.19 18 A GLN 77 -170.97 -178.98 18 A GLU 79 80.81 -57.84 18 A ALA 83 -101.76 -62.33 18 A GLN 84 72.60 -139.94 18 A GLN 85 82.11 155.11 18 A TYR 98 34.76 13.88 18 A ILE 102 15.25 -87.58 18 A LYS 104 -142.09 -73.52 18 A THR 116 71.49 -89.75 18 A PHE 117 103.56 -74.34 18 A SER 125 68.59 -61.37 18 A LEU 127 -158.92 47.64 18 A GLN 128 73.44 33.31 18 A GLU 129 72.83 46.77 18 A ASP 138 83.85 79.28 18 A TYR 141 -82.05 34.54 18 A VAL 142 -101.31 60.40 19 A TYR 36 -64.48 51.11 19 A GLU 37 73.93 86.46 19 A GLU 38 -118.03 65.34 19 A GLU 50 91.75 76.79 19 A GLU 55 87.67 -105.12 19 A SER 76 -173.89 -152.13 19 A GLN 77 -132.25 -136.03 19 A TYR 81 87.42 -115.93 19 A LYS 82 -125.58 -97.44 19 A GLN 84 86.19 -71.92 19 A ILE 90 -151.14 74.13 19 A TYR 98 19.04 -10.62 19 A GLU 129 72.53 39.21 19 A ASP 138 -102.83 66.19 19 A TYR 141 -146.93 -44.67 20 A GLN 51 -81.46 40.93 20 A SER 52 -109.22 -62.02 20 A ILE 75 60.45 130.17 20 A GLU 79 -104.54 77.88 20 A ILE 90 -175.99 123.42 20 A TYR 98 21.58 17.04 20 A LYS 104 -169.74 40.59 20 A LYS 105 71.42 75.31 20 A SER 125 50.11 -122.56 20 A LEU 127 -131.73 -81.18 20 A GLU 129 75.12 59.04 20 A TYR 141 -176.13 -179.44 20 A VAL 142 52.43 -41.46 lowest energy, model 1 GP16 1 N N VIRAL PROTEIN beta-barrel, viral protein O48446_BPSPP UNP 1 1 O48446 MYEEFPDVITFQSYVEQSNGEGGKTYKWVDEFTAAAHVQPISQEEYYKAQQLQTPIGYNIYTPYDDRIDKKMRVIYRGKI VTFIGDPVDLSGLQEITRIKGKEDGAYVG 1 109 2KCA 35 143 O48446 A 1 1 109 1 PRO engineered mutation ARG 40 2KCA A O48446 UNP 6 6 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ASP 41 A ASP 7 A VAL 49 A VAL 15 A LYS 61 A LYS 27 A PRO 74 A PRO 40 A GLY 91 A GLY 57 A PRO 97 A PRO 63 A ILE 130 A ILE 96 A LYS 136 A LYS 102 A LYS 113 A LYS 79 A ASP 123 A ASP 89 A MET 106 A MET 72 A TYR 110 A TYR 76 A ASP 41 A ASP 7 A VAL 49 A VAL 15