1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Rao, J.
Jao, C.C.
Hegde, B.
Langen, R.
Ulmer, T.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
132
8657
8668
10.1021/ja100646t
20524659
A combinatorial NMR and EPR approach for evaluating the structural ensemble of partially folded proteins.
2010
14476.108
Alpha-synuclein
1
man
polymer
Non-A beta component of AD amyloid, Non-A4 component of amyloid precursor, NACP
no
no
MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQK
TVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQK
TVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
SNCA, NACP, PARK1
9606
Homo sapiens
562
Escherichia coli
plasmid
pET-42
pdbx_nmr_exptl
repository
Initial release
Version format compliance
Data collection
1
0
2010-06-16
1
1
2011-07-13
1
2
2019-02-13
_pdbx_nmr_exptl.conditions_id
HELIX
DETERMINATION METHOD: AUTHOR DETERMINED
BMRB
Y
RCSB
2009-06-29
REL
REL
EPR EXPERIMENT WAS DONE USING ELEXSYS E 580 SPECTROMETER AT 0.45 T, 78K, AMBIENT PRESSURE, PH 7.4, IONIC STRENGHT 0.1. THE EPR SAMPLE CONTAINED 50 UM ALPHA-SYNUCLEIN, 5 MM SODIUM LAUROYL SARCOSINATE, 30% SUCROSE
ENSEMBLE SUBPOPULATION AVERAGE REPRESENTATIVES
85000
34
TRIPLE RESONANCE
QUANTITATIVE J CORRELATION HNCO
4-PULSE DEER
0.75
mM
[U-100% 13C; U-100% 15N; U-80% 2H]
75
mM
50
uM
5
mM
30
%
0.05
7.4
AMBIENT
298.2
K
simulated annealing
1
0.75 MM [U-100% 13C, U-100% 15N, U-80% 2H] ALPHA-SYNUCLEIN, 75 MM SODIUM LAUROYL SARCOSINATE, 95% H2O/5% D2O
SCHWIETERS, KUSZEWSKI, TJ
refinement
X-PLOR_NIH
structure solution
X-PLOR_NIH
700
Bruker
Avance
MET
1
n
1
MET
1
A
ASP
2
n
2
ASP
2
A
VAL
3
n
3
VAL
3
A
PHE
4
n
4
PHE
4
A
MET
5
n
5
MET
5
A
LYS
6
n
6
LYS
6
A
GLY
7
n
7
GLY
7
A
LEU
8
n
8
LEU
8
A
SER
9
n
9
SER
9
A
LYS
10
n
10
LYS
10
A
ALA
11
n
11
ALA
11
A
LYS
12
n
12
LYS
12
A
GLU
13
n
13
GLU
13
A
GLY
14
n
14
GLY
14
A
VAL
15
n
15
VAL
15
A
VAL
16
n
16
VAL
16
A
ALA
17
n
17
ALA
17
A
ALA
18
n
18
ALA
18
A
ALA
19
n
19
ALA
19
A
GLU
20
n
20
GLU
20
A
LYS
21
n
21
LYS
21
A
THR
22
n
22
THR
22
A
LYS
23
n
23
LYS
23
A
GLN
24
n
24
GLN
24
A
GLY
25
n
25
GLY
25
A
VAL
26
n
26
VAL
26
A
ALA
27
n
27
ALA
27
A
GLU
28
n
28
GLU
28
A
ALA
29
n
29
ALA
29
A
ALA
30
n
30
ALA
30
A
GLY
31
n
31
GLY
31
A
LYS
32
n
32
LYS
32
A
THR
33
n
33
THR
33
A
LYS
34
n
34
LYS
34
A
GLU
35
n
35
GLU
35
A
GLY
36
n
36
GLY
36
A
VAL
37
n
37
VAL
37
A
LEU
38
n
38
LEU
38
A
TYR
39
n
39
TYR
39
A
VAL
40
n
40
VAL
40
A
GLY
41
n
41
GLY
41
A
SER
42
n
42
SER
42
A
LYS
43
n
43
LYS
43
A
THR
44
n
44
THR
44
A
LYS
45
n
45
LYS
45
A
GLU
46
n
46
GLU
46
A
GLY
47
n
47
GLY
47
A
VAL
48
n
48
VAL
48
A
VAL
49
n
49
VAL
49
A
HIS
50
n
50
HIS
50
A
GLY
51
n
51
GLY
51
A
VAL
52
n
52
VAL
52
A
ALA
53
n
53
ALA
53
A
THR
54
n
54
THR
54
A
VAL
55
n
55
VAL
55
A
ALA
56
n
56
ALA
56
A
GLU
57
n
57
GLU
57
A
LYS
58
n
58
LYS
58
A
THR
59
n
59
THR
59
A
LYS
60
n
60
LYS
60
A
GLU
61
n
61
GLU
61
A
GLN
62
n
62
GLN
62
A
VAL
63
n
63
VAL
63
A
THR
64
n
64
THR
64
A
ASN
65
n
65
ASN
65
A
VAL
66
n
66
VAL
66
A
GLY
67
n
67
GLY
67
A
GLY
68
n
68
GLY
68
A
ALA
69
n
69
ALA
69
A
VAL
70
n
70
VAL
70
A
VAL
71
n
71
VAL
71
A
THR
72
n
72
THR
72
A
GLY
73
n
73
GLY
73
A
VAL
74
n
74
VAL
74
A
THR
75
n
75
THR
75
A
ALA
76
n
76
ALA
76
A
VAL
77
n
77
VAL
77
A
ALA
78
n
78
ALA
78
A
GLN
79
n
79
GLN
79
A
LYS
80
n
80
LYS
80
A
THR
81
n
81
THR
81
A
VAL
82
n
82
VAL
82
A
GLU
83
n
83
GLU
83
A
GLY
84
n
84
GLY
84
A
ALA
85
n
85
ALA
85
A
GLY
86
n
86
GLY
86
A
SER
87
n
87
SER
87
A
ILE
88
n
88
ILE
88
A
ALA
89
n
89
ALA
89
A
ALA
90
n
90
ALA
90
A
ALA
91
n
91
ALA
91
A
THR
92
n
92
THR
92
A
GLY
93
n
93
GLY
93
A
PHE
94
n
94
PHE
94
A
VAL
95
n
95
VAL
95
A
LYS
96
n
96
LYS
96
A
LYS
97
n
97
LYS
97
A
ASP
98
n
98
ASP
98
A
GLN
99
n
99
GLN
99
A
LEU
100
n
100
LEU
100
A
GLY
101
n
101
GLY
101
A
LYS
102
n
102
LYS
102
A
ASN
103
n
103
ASN
103
A
GLU
104
n
104
GLU
104
A
GLU
105
n
105
GLU
105
A
GLY
106
n
106
GLY
106
A
ALA
107
n
107
ALA
107
A
PRO
108
n
108
PRO
108
A
GLN
109
n
109
GLN
109
A
GLU
110
n
110
GLU
110
A
GLY
111
n
111
GLY
111
A
ILE
112
n
112
ILE
112
A
LEU
113
n
113
LEU
113
A
GLU
114
n
114
GLU
114
A
ASP
115
n
115
ASP
115
A
MET
116
n
116
MET
116
A
PRO
117
n
117
PRO
117
A
VAL
118
n
118
VAL
118
A
ASP
119
n
119
ASP
119
A
PRO
120
n
120
PRO
120
A
ASP
121
n
121
ASP
121
A
ASN
122
n
122
ASN
122
A
GLU
123
n
123
GLU
123
A
ALA
124
n
124
ALA
124
A
TYR
125
n
125
TYR
125
A
GLU
126
n
126
GLU
126
A
MET
127
n
127
MET
127
A
PRO
128
n
128
PRO
128
A
SER
129
n
129
SER
129
A
GLU
130
n
130
GLU
130
A
GLU
131
n
131
GLU
131
A
GLY
132
n
132
GLY
132
A
TYR
133
n
133
TYR
133
A
GLN
134
n
134
GLN
134
A
ASP
135
n
135
ASP
135
A
TYR
136
n
136
TYR
136
A
GLU
137
n
137
GLU
137
A
PRO
138
n
138
PRO
138
A
GLU
139
n
139
GLU
139
A
ALA
140
n
140
ALA
140
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
H
VAL
THR
55
59
1.49
1
A
A
O
H
THR
VAL
44
48
1.59
2
A
A
O
H
VAL
THR
55
59
1.49
3
A
A
O
H
THR
VAL
59
63
1.57
3
A
A
O
H
VAL
ALA
52
56
1.59
4
A
A
O
H
ILE
GLU
112
114
1.46
4
A
A
O
H
VAL
THR
55
59
1.57
6
A
A
O
H
VAL
THR
55
59
1.49
7
A
A
O
H
VAL
THR
55
59
1.49
7
A
A
O
H
VAL
VAL
66
70
1.54
7
A
A
HH
OE2
TYR
GLU
136
139
1.58
7
A
A
O
H
THR
VAL
59
63
1.60
8
A
A
H3
H
MET
ASP
1
2
1.35
8
A
A
O
H
VAL
THR
40
44
1.51
8
A
A
O
H
VAL
THR
55
59
1.51
11
A
A
O
H
VAL
THR
55
59
1.52
13
A
A
O
H
TYR
ASP
133
135
1.49
13
A
A
O
H
GLY
LEU
36
38
1.52
13
A
A
O
HG1
GLU
THR
61
64
1.58
14
A
A
O
H
VAL
THR
55
59
1.53
14
A
A
O
HZ2
GLY
LYS
31
34
1.60
15
A
A
O
H
VAL
THR
55
59
1.49
16
A
A
O
H
VAL
THR
55
59
1.48
17
A
A
O
HG1
GLU
THR
61
64
1.47
18
A
A
O
H
VAL
THR
55
59
1.50
19
A
A
HD21
OH
ASN
TYR
122
125
1.47
19
A
A
O
H
VAL
THR
55
59
1.58
20
A
A
O
H
VAL
THR
40
44
1.52
21
A
A
O
H
VAL
THR
40
44
1.59
22
A
A
O
H
VAL
THR
55
59
1.50
26
A
A
O
H
VAL
THR
55
59
1.56
27
A
A
O
H
VAL
THR
55
59
1.51
27
A
A
O
H
VAL
THR
40
44
1.52
28
A
A
O
H
VAL
THR
55
59
1.51
28
A
A
O
H
VAL
THR
40
44
1.56
28
A
A
O
HG1
ALA
THR
89
92
1.59
29
A
A
O
H
VAL
THR
55
59
1.54
30
A
A
O
H
VAL
THR
55
59
1.49
31
A
A
O
H
VAL
THR
40
44
1.49
31
A
A
O
H
VAL
THR
55
59
1.51
32
A
A
O
H
VAL
THR
55
59
1.53
34
A
A
O
H
VAL
THR
55
59
1.52
1
A
VAL
40
77.20
137.57
1
A
PHE
94
41.73
78.11
1
A
ALA
107
63.16
72.14
1
A
ASP
119
56.46
73.90
1
A
GLU
126
58.00
151.54
2
A
VAL
37
-88.41
-128.94
3
A
THR
33
-79.69
40.04
3
A
MET
116
-153.71
75.13
3
A
ASP
119
46.00
70.88
3
A
TYR
133
52.16
9.72
4
A
PHE
94
56.20
-114.37
4
A
ASP
98
-69.23
7.92
4
A
GLN
99
55.22
85.97
4
A
GLU
104
59.48
107.08
4
A
LEU
113
63.03
-50.47
4
A
GLU
114
48.78
23.55
4
A
TYR
125
50.02
103.46
4
A
TYR
133
40.59
-158.88
4
A
GLN
134
56.29
157.23
5
A
TYR
39
95.77
77.75
5
A
PHE
94
58.08
142.42
5
A
ALA
107
51.92
74.42
5
A
GLN
109
41.73
80.61
5
A
ASP
115
57.84
127.14
5
A
ALA
124
73.66
109.05
6
A
TYR
39
-74.19
-75.13
6
A
ASP
115
41.82
90.66
6
A
MET
116
65.89
73.92
6
A
SER
129
37.63
96.15
7
A
PHE
94
40.10
-108.28
7
A
ALA
107
40.57
79.92
7
A
GLU
114
65.24
-7.12
7
A
MET
116
83.89
77.83
7
A
ASP
119
-164.70
80.24
8
A
VAL
37
84.17
44.72
8
A
ALA
107
65.20
69.71
8
A
GLU
110
55.18
93.56
8
A
GLU
114
55.71
3.40
8
A
MET
116
40.16
76.98
8
A
ASP
119
-118.75
78.60
8
A
TYR
125
46.80
97.97
8
A
GLU
126
-99.55
-71.56
9
A
LYS
34
-49.83
-11.92
9
A
PHE
94
42.45
-171.50
9
A
ASP
98
57.53
120.05
9
A
GLU
123
-141.19
-118.79
9
A
ALA
124
53.78
166.81
9
A
TYR
125
47.86
-178.77
10
A
GLU
35
-172.64
138.73
10
A
VAL
37
-110.48
-159.62
10
A
PHE
94
52.39
107.40
10
A
ASP
119
-160.93
71.91
10
A
GLN
134
43.47
87.04
10
A
ASP
135
58.50
-178.37
11
A
ALA
107
-179.16
53.55
11
A
MET
116
-153.71
56.80
11
A
ASP
119
-47.96
177.99
11
A
GLU
126
50.16
97.05
11
A
TYR
133
50.20
97.37
12
A
GLU
110
36.12
74.07
12
A
ASP
119
163.08
156.69
13
A
VAL
37
66.18
-55.83
13
A
LEU
38
38.63
84.18
13
A
LYS
97
49.44
-169.98
13
A
MET
116
-41.90
160.67
13
A
ASP
119
-41.28
160.82
13
A
GLN
134
63.74
-52.81
13
A
GLU
139
40.96
78.85
14
A
VAL
37
-41.07
107.53
14
A
LEU
100
57.61
119.91
14
A
MET
116
-170.13
50.53
14
A
ASP
119
40.23
75.35
14
A
GLU
126
39.71
70.28
15
A
VAL
37
-41.02
160.09
15
A
GLU
104
41.16
84.81
15
A
GLN
109
47.99
-88.72
15
A
LEU
113
-85.38
-73.91
15
A
GLU
114
42.77
-167.37
15
A
GLU
123
58.27
116.18
15
A
GLU
130
40.31
-119.72
15
A
GLU
131
-84.29
-108.71
15
A
GLU
139
32.35
67.70
16
A
VAL
40
60.51
133.94
16
A
ASP
98
54.16
172.84
16
A
GLN
99
-100.98
47.56
16
A
ALA
107
-160.75
73.82
16
A
GLN
109
46.31
96.86
16
A
LEU
113
37.88
80.58
16
A
MET
116
-170.83
51.90
16
A
ALA
124
41.50
-164.79
16
A
GLN
134
43.81
70.55
17
A
GLU
35
55.49
10.50
17
A
ALA
107
-150.33
74.35
17
A
GLN
109
45.51
94.79
17
A
ALA
124
55.08
161.76
17
A
TYR
136
39.83
-105.25
18
A
ALA
107
49.07
-179.94
18
A
LEU
113
37.30
81.38
19
A
LYS
96
-71.48
-83.25
19
A
LYS
97
36.83
27.45
19
A
GLU
105
54.76
93.73
19
A
ALA
107
67.09
-179.47
19
A
MET
116
-140.16
54.53
19
A
ASP
119
65.37
73.00
19
A
GLU
123
49.75
-87.07
20
A
TYR
39
-179.16
93.25
20
A
GLN
99
37.23
-90.35
20
A
LEU
113
53.20
167.39
20
A
GLU
114
-93.32
-95.16
20
A
TYR
125
55.37
111.49
20
A
GLU
130
40.00
21.70
20
A
GLN
134
41.45
73.47
21
A
GLU
35
-172.67
97.06
21
A
GLN
99
55.78
-161.94
21
A
LYS
102
52.94
12.51
21
A
ASN
103
38.17
-92.18
21
A
ALA
107
163.30
73.05
21
A
GLU
110
-140.35
-77.69
21
A
LEU
113
57.49
155.48
21
A
ALA
124
54.48
-144.89
21
A
GLU
131
45.80
97.33
22
A
ALA
107
161.16
70.09
22
A
LEU
113
43.89
94.10
22
A
GLU
126
57.83
74.45
23
A
THR
33
-49.93
162.85
23
A
GLU
35
-173.45
-42.99
23
A
TYR
39
-92.23
-79.25
23
A
GLN
99
43.46
98.06
23
A
MET
116
51.47
81.68
23
A
GLU
131
-64.67
-166.64
24
A
LYS
34
-37.68
150.91
24
A
ALA
107
44.10
74.16
24
A
GLU
110
57.51
77.16
24
A
ASP
119
-177.79
75.67
24
A
GLU
131
-55.45
-169.35
24
A
GLN
134
55.25
5.54
24
A
TYR
136
39.39
-161.46
25
A
LEU
38
38.95
69.59
25
A
LEU
100
58.12
149.58
25
A
GLU
110
52.31
96.74
25
A
MET
116
-37.88
148.57
26
A
GLN
99
49.10
101.62
26
A
GLU
104
-56.39
-73.11
26
A
GLU
105
-173.31
-36.71
26
A
ALA
107
-174.15
72.74
26
A
ALA
124
54.34
-141.25
26
A
GLU
131
52.93
-94.51
26
A
GLN
134
-101.33
64.16
27
A
GLN
99
-39.41
156.61
27
A
LYS
102
47.78
99.23
27
A
GLN
109
56.97
154.11
27
A
GLU
114
39.99
94.51
27
A
ASP
115
43.72
-93.17
28
A
VAL
37
-151.76
-53.13
28
A
GLN
99
56.91
90.97
28
A
ALA
107
173.19
72.01
28
A
GLN
109
54.73
-82.98
28
A
MET
116
-155.69
73.31
29
A
GLU
110
-83.57
-79.99
29
A
MET
116
-172.48
70.09
29
A
ASP
119
70.84
55.91
29
A
GLN
134
-97.52
58.93
30
A
LEU
38
57.34
121.78
30
A
LYS
96
-103.80
76.48
30
A
LYS
97
40.56
74.09
30
A
ALA
107
39.89
75.49
30
A
ASP
119
62.85
75.52
30
A
TYR
136
39.12
-161.95
31
A
VAL
40
-151.79
20.57
31
A
GLU
105
57.01
102.37
31
A
GLU
139
54.11
78.28
32
A
ASP
119
-46.60
161.77
32
A
GLU
131
43.36
-122.17
33
A
LYS
34
54.22
12.48
33
A
TYR
39
-99.30
-112.50
33
A
GLN
99
45.91
-161.37
33
A
LYS
102
45.26
13.40
33
A
MET
116
172.76
-45.82
33
A
ASP
119
-173.99
76.32
33
A
SER
129
37.71
89.41
34
A
LYS
97
-61.38
74.72
34
A
ASP
115
-156.68
26.75
34
A
GLU
126
58.18
117.50
Alpha-synuclein
most populated ensemble subset representative, model 1
SLAS-micelle bound alpha-synuclein
1
N
N
A
ASP
2
A
ASP
2
HELX_P
A
LYS
32
A
LYS
32
1
1
31
A
SER
42
A
SER
42
HELX_P
A
THR
92
A
THR
92
1
2
51
LIPID BINDING PROTEIN
Protein-micelle interaction, LIPID BINDING PROTEIN
SYUA_HUMAN
UNP
1
1
P37840
MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQK
TVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
1
140
2KKW
1
140
P37840
A
1
1
140
1
P 1