1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Byeon, I.-J.L.
Jung, J.
Ahn, J.
concel, J.
Gronenborn, A.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
139
780
790
10.1016/j.cell.2009.10.010
19914170
Structural convergence between Cryo-EM and NMR reveals intersubunit interactions critical for HIV-1 capsid function.
2009
9839.316
HIV-1 CA C-terminal domain
2
man
polymer
no
no
MYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGG
PGHKARVL
MYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGG
PGHKARVL
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HIV-1
sample
11706
HIV-1 M:B_HXB2R
562
Escherichia coli
plasmid
pET21
repository
Initial release
Version format compliance
Database references
1
0
2009-11-24
1
1
2011-07-13
1
2
2012-03-21
BMRB
Y
RCSB
2009-09-18
REL
REL
structures with the lowest energy
500
30
2D 1H-15N HSQC
2D 1H-13C HSQC
3D HNCACB
3D HN(COCA)CB
3D HNCA
3D HN(CO)CA
3D HBHA(CO)NH
3D HCCH-TOCSY
3D simultaneous 13C,15N-edited NOESY
3D 13C/15N-filtered, 13C-edited NOESY
1.4
mM
[U-100% 13C; U-100% 15N]
1.4
mM
25
mM
2
mM
0.02
%
2
mM
[U-100% 13C; U-100% 15N]
25
mM
2
mM
0.02
%
25
6.5
ambient
298
K
The residues 223-231 exhibit unfolded/disordered structure and thus no meaning should be given to the coordinates for these residues.
simulated annealing
1
lowest energy
1.4 mM [U-100% 13C; U-100% 15N] HIV-1 CA C-terminal domain, 1.4 mM NATURAL ABUNDANCE HIV-1 CA C-terminal domain, 25 mM sodium phosphate, 2 mM DTT, 0.02 % sodium azide, 93% H2O/7% D2O
93% H2O/7% D2O
2 mM [U-100% 13C; U-100% 15N] HIV-1 CA C-terminal domain, 25 mM sodium phosphate, 2 mM DTT, 0.02 % sodium azide, 93% H2O/7% D2O
93% H2O/7% D2O
Bruker
collection
TOPSPIN
2.1
Delaglio, F. et al.
processing
NMRPipe
Goddard, T.D. et al.
data analysis
SPARKY
Goddard, T.D. et al.
peak picking
SPARKY
Guntert, P. et al.
noe peak assignments
CYANA
Herrmann, T. et al.
noe peak assignments
CANDID
Schwieters, C.D. et al.
refinement
X-PLOR_NIH
900
Bruker
Avance
Bruker Avance
800
Bruker
Avance
Bruker Avance
700
Bruker
Avance
Bruker Avance
600
Bruker
Avance
Bruker Avance
MET
144
n
1
MET
144
A
TYR
145
n
2
TYR
145
A
SER
146
n
3
SER
146
A
PRO
147
n
4
PRO
147
A
THR
148
n
5
THR
148
A
SER
149
n
6
SER
149
A
ILE
150
n
7
ILE
150
A
LEU
151
n
8
LEU
151
A
ASP
152
n
9
ASP
152
A
ILE
153
n
10
ILE
153
A
ARG
154
n
11
ARG
154
A
GLN
155
n
12
GLN
155
A
GLY
156
n
13
GLY
156
A
PRO
157
n
14
PRO
157
A
LYS
158
n
15
LYS
158
A
GLU
159
n
16
GLU
159
A
PRO
160
n
17
PRO
160
A
PHE
161
n
18
PHE
161
A
ARG
162
n
19
ARG
162
A
ASP
163
n
20
ASP
163
A
TYR
164
n
21
TYR
164
A
VAL
165
n
22
VAL
165
A
ASP
166
n
23
ASP
166
A
ARG
167
n
24
ARG
167
A
PHE
168
n
25
PHE
168
A
TYR
169
n
26
TYR
169
A
LYS
170
n
27
LYS
170
A
THR
171
n
28
THR
171
A
LEU
172
n
29
LEU
172
A
ARG
173
n
30
ARG
173
A
ALA
174
n
31
ALA
174
A
GLU
175
n
32
GLU
175
A
GLN
176
n
33
GLN
176
A
ALA
177
n
34
ALA
177
A
SER
178
n
35
SER
178
A
GLN
179
n
36
GLN
179
A
GLU
180
n
37
GLU
180
A
VAL
181
n
38
VAL
181
A
LYS
182
n
39
LYS
182
A
ASN
183
n
40
ASN
183
A
TRP
184
n
41
TRP
184
A
MET
185
n
42
MET
185
A
THR
186
n
43
THR
186
A
GLU
187
n
44
GLU
187
A
THR
188
n
45
THR
188
A
LEU
189
n
46
LEU
189
A
LEU
190
n
47
LEU
190
A
VAL
191
n
48
VAL
191
A
GLN
192
n
49
GLN
192
A
ASN
193
n
50
ASN
193
A
ALA
194
n
51
ALA
194
A
ASN
195
n
52
ASN
195
A
PRO
196
n
53
PRO
196
A
ASP
197
n
54
ASP
197
A
CYS
198
n
55
CYS
198
A
LYS
199
n
56
LYS
199
A
THR
200
n
57
THR
200
A
ILE
201
n
58
ILE
201
A
LEU
202
n
59
LEU
202
A
LYS
203
n
60
LYS
203
A
ALA
204
n
61
ALA
204
A
LEU
205
n
62
LEU
205
A
GLY
206
n
63
GLY
206
A
PRO
207
n
64
PRO
207
A
ALA
208
n
65
ALA
208
A
ALA
209
n
66
ALA
209
A
THR
210
n
67
THR
210
A
LEU
211
n
68
LEU
211
A
GLU
212
n
69
GLU
212
A
GLU
213
n
70
GLU
213
A
MET
214
n
71
MET
214
A
MET
215
n
72
MET
215
A
THR
216
n
73
THR
216
A
ALA
217
n
74
ALA
217
A
CYS
218
n
75
CYS
218
A
GLN
219
n
76
GLN
219
A
GLY
220
n
77
GLY
220
A
VAL
221
n
78
VAL
221
A
GLY
222
n
79
GLY
222
A
GLY
223
n
80
GLY
223
A
PRO
224
n
81
PRO
224
A
GLY
225
n
82
GLY
225
A
HIS
226
n
83
HIS
226
A
LYS
227
n
84
LYS
227
A
ALA
228
n
85
ALA
228
A
ARG
229
n
86
ARG
229
A
VAL
230
n
87
VAL
230
A
LEU
231
n
88
LEU
231
A
MET
144
n
1
MET
144
B
TYR
145
n
2
TYR
145
B
SER
146
n
3
SER
146
B
PRO
147
n
4
PRO
147
B
THR
148
n
5
THR
148
B
SER
149
n
6
SER
149
B
ILE
150
n
7
ILE
150
B
LEU
151
n
8
LEU
151
B
ASP
152
n
9
ASP
152
B
ILE
153
n
10
ILE
153
B
ARG
154
n
11
ARG
154
B
GLN
155
n
12
GLN
155
B
GLY
156
n
13
GLY
156
B
PRO
157
n
14
PRO
157
B
LYS
158
n
15
LYS
158
B
GLU
159
n
16
GLU
159
B
PRO
160
n
17
PRO
160
B
PHE
161
n
18
PHE
161
B
ARG
162
n
19
ARG
162
B
ASP
163
n
20
ASP
163
B
TYR
164
n
21
TYR
164
B
VAL
165
n
22
VAL
165
B
ASP
166
n
23
ASP
166
B
ARG
167
n
24
ARG
167
B
PHE
168
n
25
PHE
168
B
TYR
169
n
26
TYR
169
B
LYS
170
n
27
LYS
170
B
THR
171
n
28
THR
171
B
LEU
172
n
29
LEU
172
B
ARG
173
n
30
ARG
173
B
ALA
174
n
31
ALA
174
B
GLU
175
n
32
GLU
175
B
GLN
176
n
33
GLN
176
B
ALA
177
n
34
ALA
177
B
SER
178
n
35
SER
178
B
GLN
179
n
36
GLN
179
B
GLU
180
n
37
GLU
180
B
VAL
181
n
38
VAL
181
B
LYS
182
n
39
LYS
182
B
ASN
183
n
40
ASN
183
B
TRP
184
n
41
TRP
184
B
MET
185
n
42
MET
185
B
THR
186
n
43
THR
186
B
GLU
187
n
44
GLU
187
B
THR
188
n
45
THR
188
B
LEU
189
n
46
LEU
189
B
LEU
190
n
47
LEU
190
B
VAL
191
n
48
VAL
191
B
GLN
192
n
49
GLN
192
B
ASN
193
n
50
ASN
193
B
ALA
194
n
51
ALA
194
B
ASN
195
n
52
ASN
195
B
PRO
196
n
53
PRO
196
B
ASP
197
n
54
ASP
197
B
CYS
198
n
55
CYS
198
B
LYS
199
n
56
LYS
199
B
THR
200
n
57
THR
200
B
ILE
201
n
58
ILE
201
B
LEU
202
n
59
LEU
202
B
LYS
203
n
60
LYS
203
B
ALA
204
n
61
ALA
204
B
LEU
205
n
62
LEU
205
B
GLY
206
n
63
GLY
206
B
PRO
207
n
64
PRO
207
B
ALA
208
n
65
ALA
208
B
ALA
209
n
66
ALA
209
B
THR
210
n
67
THR
210
B
LEU
211
n
68
LEU
211
B
GLU
212
n
69
GLU
212
B
GLU
213
n
70
GLU
213
B
MET
214
n
71
MET
214
B
MET
215
n
72
MET
215
B
THR
216
n
73
THR
216
B
ALA
217
n
74
ALA
217
B
CYS
218
n
75
CYS
218
B
GLN
219
n
76
GLN
219
B
GLY
220
n
77
GLY
220
B
VAL
221
n
78
VAL
221
B
GLY
222
n
79
GLY
222
B
GLY
223
n
80
GLY
223
B
PRO
224
n
81
PRO
224
B
GLY
225
n
82
GLY
225
B
HIS
226
n
83
HIS
226
B
LYS
227
n
84
LYS
227
B
ALA
228
n
85
ALA
228
B
ARG
229
n
86
ARG
229
B
VAL
230
n
87
VAL
230
B
LEU
231
n
88
LEU
231
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
B
O
H
VAL
MET
181
185
1.51
1
A
A
O
H
VAL
MET
181
185
1.52
1
B
B
OD1
H
ASN
CYS
195
198
1.52
1
A
A
OD1
H
ASN
CYS
195
198
1.54
2
A
A
HD22
HG
ASN
CYS
195
198
1.31
2
A
A
O
H
VAL
MET
181
185
1.49
2
B
B
O
H
VAL
MET
181
185
1.49
2
B
B
OD1
H
ASN
CYS
195
198
1.59
3
B
B
OD1
H
ASN
CYS
195
198
1.46
3
B
B
O
H
VAL
MET
181
185
1.51
3
A
A
O
H
VAL
MET
181
185
1.51
3
A
A
HE21
O
GLN
GLU
155
159
1.58
3
B
B
HE21
O
GLN
GLU
155
159
1.59
4
B
B
OD1
H
ASN
CYS
195
198
1.42
4
A
A
OD1
H
ASN
CYS
195
198
1.44
5
A
A
HE21
O
GLN
GLU
155
159
1.59
6
A
A
OD1
H
ASN
CYS
195
198
1.56
7
A
A
O
H
VAL
MET
181
185
1.50
7
B
B
O
H
VAL
MET
181
185
1.51
7
A
A
OD1
H
ASN
CYS
195
198
1.55
7
B
B
OD1
H
ASN
CYS
195
198
1.56
7
A
A
OG1
H
THR
SER
148
149
1.60
8
A
A
HE21
O
GLN
GLU
155
159
1.57
8
B
B
HE21
O
GLN
GLU
155
159
1.58
9
B
B
HE22
HD22
GLN
ASN
179
183
1.34
9
B
B
O
H
VAL
MET
181
185
1.53
9
A
A
O
H
VAL
MET
181
185
1.53
9
B
B
OG1
H
THR
SER
148
149
1.60
10
B
B
O
H
VAL
MET
181
185
1.56
10
A
A
O
H
VAL
MET
181
185
1.58
11
A
A
HG1
H
THR
SER
148
149
1.25
11
A
A
HD22
HG
ASN
CYS
195
198
1.29
11
B
B
HD22
HG
ASN
CYS
195
198
1.31
11
B
B
HG1
H
THR
SER
148
149
1.34
11
A
A
OD1
H
ASN
CYS
195
198
1.52
11
B
B
OD1
H
ASN
CYS
195
198
1.52
11
A
A
O
H
VAL
MET
181
185
1.54
11
B
B
OG1
H
THR
SER
148
149
1.58
12
A
A
O
H
VAL
MET
181
185
1.48
12
B
B
O
H
VAL
MET
181
185
1.50
12
B
B
OG1
H
THR
SER
148
149
1.59
12
A
A
OG1
H
THR
SER
148
149
1.60
13
B
B
O
H
VAL
MET
181
185
1.55
13
A
A
O
H
VAL
MET
181
185
1.56
13
A
A
OD1
H
ASN
CYS
195
198
1.58
13
B
B
OG1
H
THR
SER
148
149
1.59
13
B
B
OD1
H
ASN
CYS
195
198
1.60
15
B
B
O
H
VAL
MET
181
185
1.51
15
A
A
O
H
VAL
MET
181
185
1.53
16
B
B
O
H
VAL
MET
181
185
1.51
16
A
A
O
H
VAL
MET
181
185
1.52
16
A
A
HE21
O
GLN
GLU
155
159
1.56
17
A
B
H1
HZ2
MET
LYS
144
203
1.23
17
A
A
HG1
H
THR
SER
148
149
1.26
17
A
B
HZ2
H1
LYS
MET
203
144
1.31
17
B
B
HG1
H
THR
SER
148
149
1.33
17
B
B
HE21
O
GLN
GLU
155
159
1.55
17
A
A
HE21
O
GLN
GLU
155
159
1.57
17
B
B
OD1
H
ASN
CYS
195
198
1.59
17
A
A
OD1
H
ASN
CYS
195
198
1.60
17
B
B
O
H
VAL
MET
181
185
1.60
17
B
B
OG1
H
THR
SER
148
149
1.60
18
B
B
HD1
H
HIS
ALA
226
228
1.35
18
B
B
OD1
H
ASN
CYS
195
198
1.38
18
A
A
OD1
H
ASN
CYS
195
198
1.40
18
B
B
O
H
VAL
MET
181
185
1.45
18
A
A
O
H
VAL
MET
181
185
1.47
18
A
A
OG1
H
THR
SER
148
149
1.58
18
B
B
OG1
H
THR
SER
148
149
1.58
19
B
B
HE21
O
GLN
GLU
155
159
1.55
19
A
A
HE21
O
GLN
GLU
155
159
1.55
20
B
B
HG1
H
THR
SER
148
149
1.23
21
B
B
O
H
VAL
MET
181
185
1.55
21
A
A
O
H
VAL
MET
181
185
1.55
22
A
A
HH
HZ1
TYR
LYS
169
182
1.33
22
B
B
O
H
SER
ASP
149
152
1.57
22
A
A
O
H
SER
ASP
149
152
1.59
23
A
A
HE21
O
GLN
GLU
155
159
1.53
23
A
A
OG1
H
THR
SER
148
149
1.59
23
B
B
OG1
H
THR
SER
148
149
1.60
23
B
B
HE21
O
GLN
GLU
155
159
1.60
24
A
A
O
H
VAL
MET
181
185
1.52
24
B
B
O
H
VAL
MET
181
185
1.53
24
A
A
HE21
O
GLN
GLU
155
159
1.56
24
B
B
HE21
O
GLN
GLU
155
159
1.56
25
A
A
HG1
H
THR
SER
148
149
1.30
25
B
B
HG1
H
THR
SER
148
149
1.34
25
B
B
OD1
H
ASN
CYS
195
198
1.58
25
A
A
OD1
H
ASN
CYS
195
198
1.59
26
B
B
HE21
O
GLN
GLU
155
159
1.56
26
B
B
OG1
H
THR
SER
148
149
1.57
26
A
A
OG1
H
THR
SER
148
149
1.58
27
A
A
O
H
VAL
MET
181
185
1.49
27
B
B
O
H
VAL
MET
181
185
1.50
28
A
A
O
H
VAL
MET
181
185
1.50
28
B
B
O
H
VAL
MET
181
185
1.53
29
A
B
HZ1
HH
LYS
TYR
199
145
1.30
29
B
B
HE21
O
GLN
GLU
155
159
1.51
29
A
A
HE21
O
GLN
GLU
155
159
1.53
30
B
B
HD22
HG
ASN
CYS
195
198
1.27
30
A
A
HD22
HG
ASN
CYS
195
198
1.28
30
B
B
O
H
VAL
MET
181
185
1.53
30
A
A
O
H
VAL
MET
181
185
1.55
30
A
A
HE21
O
GLN
GLU
155
159
1.57
30
B
B
OD1
H
ASN
CYS
195
198
1.60
1
A
SER
146
174.64
72.58
1
A
THR
148
32.30
-136.00
1
A
SER
149
-155.03
-24.33
1
A
THR
188
-108.36
-62.04
1
A
PRO
196
-52.53
-1.80
1
A
PRO
207
-69.57
14.21
1
A
ALA
228
49.45
-89.71
1
A
ARG
229
59.49
138.57
1
B
SER
146
178.18
71.74
1
B
PRO
147
-68.06
2.17
1
B
THR
148
34.40
-136.41
1
B
SER
149
-157.38
-24.01
1
B
THR
188
-109.83
-64.32
1
B
PRO
196
-51.87
-2.05
1
B
ALA
228
53.86
-89.33
1
B
ARG
229
59.29
144.00
2
A
TYR
145
-77.84
34.76
2
A
SER
146
61.16
63.99
2
A
THR
148
34.34
-147.42
2
A
SER
149
-143.44
-18.38
2
A
THR
186
-65.77
5.74
2
A
THR
188
-103.57
-65.26
2
A
PRO
196
-53.18
-1.10
2
A
LYS
227
-178.97
149.81
2
A
ARG
229
-146.31
-69.73
2
B
TYR
145
-74.00
32.28
2
B
SER
146
63.76
65.21
2
B
THR
148
34.96
-143.79
2
B
SER
149
-146.46
-19.35
2
B
THR
186
-65.76
4.96
2
B
THR
188
-104.71
-65.11
2
B
PRO
196
-52.74
-1.11
2
B
LYS
227
-179.02
148.75
2
B
ARG
229
-144.90
-70.32
3
A
SER
146
-179.60
67.55
3
A
THR
148
30.72
-123.46
3
A
SER
149
-151.95
-29.23
3
A
ARG
154
-165.41
117.75
3
A
GLN
176
34.13
90.08
3
A
THR
186
-64.64
13.92
3
A
THR
188
-105.07
-65.45
3
A
PRO
196
-56.85
-4.08
3
A
ASP
197
-101.52
-60.68
3
A
PRO
207
-73.22
24.32
3
A
HIS
226
50.25
-87.95
3
B
SER
146
-179.01
68.14
3
B
THR
148
31.78
-126.02
3
B
SER
149
-148.98
-29.17
3
B
ARG
154
-165.76
117.68
3
B
GLN
176
33.94
92.97
3
B
THR
186
-64.75
14.83
3
B
THR
188
-104.98
-65.00
3
B
PRO
196
-58.28
-2.82
3
B
ASP
197
-101.03
-61.23
3
B
PRO
207
-72.06
26.62
3
B
HIS
226
46.72
-89.46
4
A
SER
146
169.81
70.87
4
A
THR
148
37.31
-157.84
4
A
SER
149
-136.44
-32.45
4
A
ARG
154
-165.76
117.18
4
A
HIS
226
51.74
11.03
4
A
ARG
229
70.44
-41.42
4
B
SER
146
172.25
71.33
4
B
THR
148
37.03
-158.26
4
B
SER
149
-135.62
-31.80
4
B
ARG
154
-165.25
116.72
4
B
HIS
226
55.42
6.92
4
B
ARG
229
70.64
-41.20
5
A
SER
146
-176.14
68.68
5
A
THR
148
33.38
-128.91
5
A
SER
149
-161.61
-27.33
5
A
GLN
176
28.49
79.13
5
A
THR
188
-105.55
-62.72
5
A
PRO
196
-52.20
-3.85
5
A
PRO
207
-69.57
19.08
5
A
VAL
230
45.31
96.28
5
B
SER
146
-175.18
69.12
5
B
THR
148
35.77
-127.51
5
B
SER
149
-163.89
-28.35
5
B
GLU
175
-81.08
-90.68
5
B
GLN
176
123.81
82.16
5
B
THR
188
-105.08
-61.46
5
B
PRO
196
-55.26
-1.78
5
B
VAL
230
45.13
95.43
6
A
TYR
145
-161.35
25.46
6
A
SER
146
67.36
68.85
6
A
PRO
147
-75.17
22.98
6
A
THR
148
34.74
-145.56
6
A
SER
149
-149.68
-13.61
6
A
ARG
154
-163.87
116.60
6
A
THR
188
-108.66
-61.66
6
A
PRO
196
-54.55
0.08
6
A
HIS
226
-150.10
-58.21
6
A
ARG
229
58.97
147.78
6
B
TYR
145
-164.32
27.38
6
B
SER
146
65.65
68.00
6
B
PRO
147
-75.13
22.29
6
B
THR
148
35.40
-148.01
6
B
SER
149
-147.57
-13.26
6
B
ARG
154
-164.40
116.66
6
B
THR
188
-106.93
-61.54
6
B
PRO
196
-57.09
2.78
6
B
HIS
226
-151.11
-58.86
6
B
ARG
229
60.45
148.69
7
A
SER
146
-177.20
64.04
7
A
THR
148
33.04
-137.34
7
A
SER
149
-148.37
-23.91
7
A
THR
188
-109.95
-66.18
7
A
PRO
196
-50.93
-2.03
7
A
PRO
207
-70.34
25.35
7
A
ALA
228
56.64
75.73
7
B
SER
146
-177.47
62.19
7
B
THR
148
32.89
-135.12
7
B
SER
149
-151.09
-23.55
7
B
ARG
154
-169.70
119.98
7
B
THR
188
-109.24
-65.55
7
B
PRO
196
-49.20
-3.05
7
B
PRO
207
-70.66
25.53
7
B
ALA
228
56.50
76.81
7
B
VAL
230
-71.26
21.90
8
A
SER
146
69.15
73.63
8
A
THR
148
35.72
-153.02
8
A
SER
149
-144.54
-23.78
8
A
GLN
176
30.71
78.70
8
A
THR
188
-106.34
-61.43
8
A
PRO
196
-57.94
1.35
8
B
SER
146
73.00
74.08
8
B
THR
148
35.52
-153.44
8
B
SER
149
-143.36
-24.28
8
B
ARG
154
-168.56
118.40
8
B
THR
188
-107.05
-61.00
8
B
PRO
196
-58.59
1.99
8
B
HIS
226
-71.84
-75.00
9
A
SER
146
67.83
69.10
9
A
PRO
147
-74.11
32.47
9
A
THR
148
34.99
-144.82
9
A
SER
149
-150.75
-7.56
9
A
THR
188
-107.28
-64.20
9
B
TYR
145
-77.83
24.66
9
B
SER
146
65.59
69.69
9
B
PRO
147
-74.35
34.53
9
B
THR
148
34.31
-145.67
9
B
SER
149
-150.16
-7.12
9
B
ALA
177
-138.34
-110.34
9
B
THR
188
-106.51
-64.16
10
A
SER
146
171.78
69.63
10
A
THR
148
36.65
-154.95
10
A
PRO
196
-59.60
-3.03
10
A
ASP
197
-100.14
-60.79
10
A
ALA
228
-161.08
-138.05
10
B
SER
146
175.68
69.50
10
B
THR
148
35.58
-152.09
10
B
SER
149
-140.16
-26.89
10
B
PRO
196
-59.53
-2.78
10
B
ASP
197
-100.16
-61.01
10
B
ALA
228
-164.81
-137.80
10
B
ARG
229
-78.47
20.10
11
A
TYR
145
-149.51
-61.97
11
A
SER
146
179.97
68.52
11
A
THR
148
34.66
-140.60
11
A
SER
149
-154.72
-23.62
11
A
GLN
176
28.88
78.11
11
A
THR
186
-67.78
12.52
11
A
THR
188
-105.92
-63.13
11
A
PRO
196
-51.77
-3.45
11
A
ALA
228
-169.24
-64.81
11
A
ARG
229
61.32
-71.46
11
A
VAL
230
62.52
-16.82
11
B
TYR
145
-154.23
-55.50
11
B
SER
146
170.21
69.26
11
B
THR
148
34.27
-150.75
11
B
SER
149
-144.92
-22.63
11
B
ARG
154
-160.30
116.40
11
B
GLN
176
25.64
88.27
11
B
ALA
177
-157.51
34.26
11
B
SER
178
58.83
143.27
11
B
THR
186
-69.03
12.96
11
B
THR
188
-107.34
-61.60
11
B
PRO
196
-49.81
-2.99
11
B
ALA
228
-170.50
-65.18
11
B
ARG
229
61.55
-70.82
11
B
VAL
230
62.85
-20.98
12
A
SER
146
-174.96
65.59
12
A
THR
148
35.85
-153.30
12
A
SER
149
-141.27
-26.14
12
A
THR
186
-69.71
10.79
12
A
THR
188
-108.46
-63.90
12
A
ASP
197
-101.89
-61.37
12
A
ARG
229
-163.45
100.07
12
B
SER
146
-174.94
65.29
12
B
THR
148
32.76
-142.11
12
B
SER
149
-149.33
-26.94
12
B
ARG
154
-161.98
118.19
12
B
THR
186
-67.48
8.90
12
B
PRO
196
-59.88
-2.86
12
B
ASP
197
-100.46
-60.08
12
B
ARG
229
-165.06
99.78
13
A
SER
146
-174.65
70.13
13
A
THR
148
34.46
-138.36
13
A
SER
149
-155.67
-29.94
13
A
ARG
154
-175.96
123.84
13
A
THR
188
-109.79
-67.13
13
A
PRO
196
-53.25
-1.93
13
A
LYS
227
59.68
100.11
13
A
ARG
229
-172.89
-177.80
13
B
SER
146
-174.62
71.30
13
B
THR
148
34.99
-147.26
13
B
SER
149
-144.19
-28.29
13
B
LEU
151
-67.09
4.00
13
B
ARG
154
-175.56
123.32
13
B
THR
188
-108.19
-67.79
13
B
PRO
196
-52.97
-1.03
13
B
LYS
227
60.79
99.19
13
B
ARG
229
-172.82
-178.75
14
A
SER
146
170.34
66.97
14
A
THR
148
34.46
-152.11
14
A
LEU
151
-72.96
22.32
14
A
ARG
154
-160.98
114.53
14
A
THR
188
-108.72
-63.94
14
A
PRO
196
-58.05
-6.95
14
A
ASP
197
-100.07
-61.10
14
B
SER
146
173.27
67.69
14
B
THR
148
35.11
-154.99
14
B
LEU
151
-72.96
20.58
14
B
ARG
154
-160.25
115.18
14
B
THR
188
-109.27
-63.46
14
B
PRO
196
-57.89
-6.76
14
B
ASP
197
-100.42
-61.50
15
A
TYR
145
-73.94
28.85
15
A
SER
146
54.03
71.63
15
A
PRO
147
-67.04
16.61
15
A
THR
148
38.78
-160.28
15
A
THR
186
-65.58
1.67
15
A
THR
188
-107.41
-66.18
15
A
PRO
196
-58.76
-5.03
15
A
ASP
197
-101.11
-61.69
15
A
PRO
224
-51.32
173.41
15
A
HIS
226
-176.05
28.39
15
B
TYR
145
-71.81
25.47
15
B
SER
146
56.07
72.24
15
B
PRO
147
-66.77
17.28
15
B
THR
148
38.65
-160.03
15
B
ARG
154
-162.23
116.95
15
B
THR
186
-68.61
8.71
15
B
THR
188
-106.38
-66.89
15
B
ASP
197
-101.54
-60.91
15
B
PRO
224
-51.49
173.15
15
B
HIS
226
-174.90
27.36
16
A
SER
146
-173.18
68.62
16
A
THR
148
33.55
-137.70
16
A
SER
149
-156.79
-31.21
16
A
THR
186
-66.73
11.24
16
A
THR
188
-104.60
-64.03
16
A
ALA
228
-160.68
27.75
16
B
SER
146
-173.38
68.95
16
B
THR
148
33.10
-136.52
16
B
SER
149
-157.13
-31.35
16
B
GLN
176
31.17
91.24
16
B
THR
186
-66.98
12.01
16
B
THR
188
-103.46
-65.87
16
B
ALA
228
-163.30
27.44
17
A
SER
146
-174.44
69.03
17
A
THR
148
34.42
-142.23
17
A
SER
149
-154.89
-31.74
17
A
ARG
154
-162.66
116.48
17
A
THR
188
-103.09
-63.18
17
A
PRO
196
-50.05
-1.18
17
A
LYS
227
41.51
77.27
17
A
ALA
228
-119.96
74.93
17
A
ARG
229
57.15
120.04
17
B
SER
146
-175.17
68.87
17
B
THR
148
33.82
-140.41
17
B
SER
149
-155.97
-31.66
17
B
ARG
154
-164.75
116.62
17
B
THR
188
-105.10
-62.62
17
B
PRO
196
-50.52
-1.12
17
B
LYS
227
40.69
74.65
17
B
ALA
228
-117.46
74.68
17
B
ARG
229
57.96
124.63
18
A
SER
146
165.64
70.38
18
A
THR
148
31.36
-133.60
18
A
SER
149
-157.00
-25.08
18
A
ARG
154
-163.08
114.13
18
A
ALA
177
-135.53
-109.85
18
A
THR
186
-66.22
11.04
18
A
THR
188
-102.60
-61.08
18
A
HIS
226
53.57
-167.75
18
A
LYS
227
-134.27
-39.72
18
B
SER
146
166.79
71.08
18
B
THR
148
31.82
-132.05
18
B
SER
149
-159.26
-26.01
18
B
ARG
154
-161.97
114.09
18
B
THR
186
-65.81
6.10
18
B
THR
188
-106.67
-62.20
18
B
HIS
226
60.49
-157.99
18
B
LYS
227
-147.59
-34.52
19
A
TYR
145
-168.72
21.04
19
A
SER
146
66.14
68.13
19
A
PRO
147
-68.80
14.17
19
A
THR
148
35.90
-153.93
19
A
SER
149
-144.73
-25.96
19
A
PRO
196
-59.80
-0.73
19
A
ASP
197
-102.12
-60.84
19
A
ALA
228
-144.65
39.95
19
B
TYR
145
-167.99
22.09
19
B
SER
146
64.39
67.98
19
B
PRO
147
-69.90
13.66
19
B
THR
148
36.13
-154.08
19
B
SER
149
-143.96
-27.24
19
B
ASP
197
-102.30
-60.99
19
B
ALA
228
-151.84
38.21
20
A
TYR
145
-149.10
-53.92
20
A
SER
146
168.53
70.69
20
A
THR
148
31.75
-130.03
20
A
SER
149
-163.40
-27.51
20
A
THR
186
-69.94
11.11
20
A
THR
188
-104.11
-64.10
20
A
ASP
197
-102.13
-60.48
20
A
VAL
221
-68.13
-97.45
20
A
ALA
228
58.43
96.47
20
B
TYR
145
-148.46
-55.82
20
B
SER
146
173.99
68.94
20
B
PRO
147
-69.93
6.47
20
B
THR
148
33.33
-125.21
20
B
SER
149
-171.25
-29.18
20
B
GLN
176
25.04
75.36
20
B
THR
186
-65.80
1.51
20
B
THR
188
-104.07
-65.66
20
B
ASP
197
-102.05
-60.57
20
B
VAL
221
-66.20
-93.65
20
B
ALA
228
58.42
92.69
21
A
SER
146
178.71
63.78
21
A
THR
148
33.59
-126.46
21
A
SER
149
-162.07
-26.73
21
A
ARG
154
-163.24
115.73
21
A
THR
188
-106.28
-61.25
21
A
PRO
196
-53.43
-2.04
21
A
PRO
207
-70.37
23.51
21
A
ALA
228
-44.77
97.09
21
B
SER
146
178.74
63.19
21
B
THR
148
30.78
-127.62
21
B
SER
149
-158.78
-22.73
21
B
ARG
154
-165.08
116.00
21
B
THR
188
-108.20
-60.76
21
B
PRO
196
-51.10
-2.93
21
B
PRO
207
-70.88
22.02
21
B
ALA
228
-44.61
100.32
22
A
TYR
145
-73.16
21.89
22
A
SER
146
63.49
71.03
22
A
THR
148
35.85
-154.53
22
A
ARG
154
-164.94
115.32
22
A
HIS
226
-174.11
50.84
22
A
ALA
228
57.99
-139.68
22
A
ARG
229
-63.01
-88.42
22
A
VAL
230
41.00
92.93
22
B
TYR
145
-74.91
25.06
22
B
SER
146
60.17
72.06
22
B
THR
148
35.22
-154.13
22
B
ARG
154
-164.90
115.37
22
B
THR
188
-106.85
-62.40
22
B
HIS
226
-173.11
57.40
22
B
ALA
228
55.23
-139.70
22
B
ARG
229
-62.77
-88.48
22
B
VAL
230
40.92
89.93
23
A
SER
146
168.32
72.75
23
A
THR
148
32.78
-140.62
23
A
ARG
154
-167.77
115.25
23
A
GLN
176
29.72
83.57
23
A
THR
188
-105.73
-62.88
23
A
PRO
196
-59.82
-2.89
23
A
ASP
197
-102.14
-60.06
23
A
VAL
230
59.69
151.40
23
B
SER
146
176.07
73.78
23
B
THR
148
33.48
-140.55
23
B
ARG
154
-167.01
115.33
23
B
THR
188
-106.18
-62.79
23
B
ASP
197
-102.48
-60.21
23
B
VAL
230
59.30
150.67
24
A
SER
146
175.42
71.79
24
A
THR
148
31.70
-133.49
24
A
SER
149
-152.17
-26.95
24
A
LEU
151
-68.53
1.77
24
A
ALA
177
-124.89
-114.89
24
A
THR
188
-108.99
-65.03
24
A
PRO
196
-56.31
2.16
24
A
PRO
207
-70.64
25.73
24
B
SER
146
173.76
71.58
24
B
THR
148
32.71
-133.33
24
B
SER
149
-152.98
-28.21
24
B
LEU
151
-67.20
1.43
24
B
PRO
196
-55.42
1.55
24
B
PRO
207
-69.80
23.45
25
A
SER
146
166.97
68.59
25
A
THR
148
33.77
-136.97
25
A
SER
149
-154.12
-24.91
25
A
GLN
176
-75.91
21.58
25
A
PRO
196
-48.52
-4.47
25
A
PRO
207
-70.70
25.55
25
A
GLN
219
-72.48
26.25
25
A
HIS
226
-78.34
33.11
25
A
LYS
227
50.62
-105.83
25
A
ALA
228
-161.47
42.68
25
B
SER
146
167.23
68.27
25
B
THR
148
32.77
-136.11
25
B
SER
149
-154.24
-24.88
25
B
THR
186
-65.49
0.90
25
B
PRO
196
-48.26
-4.13
25
B
PRO
207
-70.23
27.46
25
B
GLN
219
-72.56
27.46
25
B
HIS
226
-79.73
32.81
25
B
LYS
227
51.25
-100.57
25
B
ALA
228
-167.66
43.79
26
A
SER
146
-171.50
62.14
26
A
THR
148
33.57
-149.78
26
A
SER
149
-141.65
-32.98
26
A
ARG
154
-160.44
117.00
26
A
THR
186
-68.65
0.00
26
A
THR
188
-104.62
-66.20
26
A
PRO
196
-57.45
-1.72
26
A
ALA
228
-155.77
0.54
26
B
SER
146
-169.35
61.81
26
B
THR
148
33.75
-150.14
26
B
SER
149
-140.08
-33.61
26
B
ARG
154
-161.87
117.27
26
B
THR
188
-105.29
-65.73
26
B
PRO
196
-57.17
-2.12
26
B
ALA
228
-153.55
-1.96
27
A
SER
146
175.33
68.70
27
A
PRO
147
-69.14
6.16
27
A
THR
148
32.87
-121.66
27
A
SER
149
-167.99
-27.21
27
A
GLN
176
26.63
73.72
27
A
THR
186
-67.27
10.85
27
A
PRO
196
-58.50
-1.95
27
A
PRO
207
-72.39
21.26
27
A
ARG
229
49.68
101.52
27
B
SER
146
176.53
71.28
27
B
THR
148
31.92
-122.72
27
B
SER
149
-164.34
-25.59
27
B
GLN
176
27.13
80.54
27
B
THR
186
-68.32
14.70
27
B
PRO
207
-71.09
26.18
27
B
ARG
229
50.36
104.05
28
A
SER
146
176.75
72.57
28
A
THR
148
33.89
-138.86
28
A
SER
149
-147.38
-28.21
28
A
LEU
151
-66.01
8.05
28
A
ARG
154
-165.08
114.34
28
A
PRO
196
-59.43
-2.59
28
A
PRO
207
-71.11
22.64
28
A
VAL
221
-95.87
-72.89
28
A
LYS
227
-157.15
1.09
28
A
ALA
228
49.89
176.32
28
B
SER
146
177.49
71.95
28
B
THR
148
33.75
-136.43
28
B
SER
149
-152.38
-28.13
28
B
LEU
151
-65.71
6.78
28
B
ARG
154
-165.47
114.44
28
B
PRO
196
-59.31
-2.64
28
B
ASP
197
-101.73
-60.26
28
B
LYS
227
-152.03
1.20
28
B
ALA
228
50.19
176.58
29
A
TYR
145
-75.68
34.39
29
A
SER
146
55.69
70.22
29
A
PRO
147
-72.43
23.18
29
A
THR
148
34.75
-149.92
29
A
SER
149
-143.95
-16.86
29
A
ARG
154
-161.84
115.21
29
A
THR
188
-103.62
-65.97
29
A
ASP
197
-101.07
-60.79
29
A
HIS
226
60.46
115.34
29
A
ALA
228
-162.49
116.16
29
B
TYR
145
-78.51
35.11
29
B
PRO
147
-73.92
22.66
29
B
THR
148
34.46
-149.71
29
B
SER
149
-143.31
-16.35
29
B
ARG
154
-162.23
115.18
29
B
THR
188
-103.46
-65.83
29
B
ASP
197
-101.70
-60.68
29
B
PRO
207
-69.76
6.29
29
B
HIS
226
52.38
112.38
29
B
ALA
228
-163.62
114.57
30
A
SER
146
-179.64
65.35
30
A
THR
148
31.72
-133.70
30
A
SER
149
-155.02
-18.97
30
A
ALA
177
-142.00
19.04
30
A
SER
178
60.05
151.63
30
A
THR
186
-68.42
12.07
30
A
THR
188
-107.99
-60.16
30
A
PRO
196
-55.00
1.32
30
A
VAL
221
-131.70
-34.08
30
B
SER
146
179.24
65.13
30
B
THR
148
32.11
-133.86
30
B
SER
149
-154.39
-21.16
30
B
LEU
151
-68.91
0.57
30
B
THR
186
-67.98
12.65
30
B
THR
188
-106.61
-62.32
30
B
PRO
196
-50.04
-0.79
30
B
VAL
221
-132.69
-34.51
HIV-1 CA C-terminal domain
A high-resolution NMR structure of the dimeric C-terminal domain of HIV-1 CA
1
N
N
1
N
N
A
SER
149
A
SER
6
HELX_P
A
ILE
153
A
ILE
10
5
1
5
A
PRO
160
A
PRO
17
HELX_P
A
ARG
173
A
ARG
30
1
2
14
A
SER
178
A
SER
35
HELX_P
A
ASN
193
A
ASN
50
1
3
16
A
ASP
197
A
ASP
54
HELX_P
A
GLY
206
A
GLY
63
1
4
10
A
THR
210
A
THR
67
HELX_P
A
CYS
218
A
CYS
75
1
5
9
B
SER
149
B
SER
6
HELX_P
B
ILE
153
B
ILE
10
5
6
5
B
PRO
160
B
PRO
17
HELX_P
B
ARG
173
B
ARG
30
1
7
14
B
SER
178
B
SER
35
HELX_P
B
ASN
193
B
ASN
50
1
8
16
B
ASP
197
B
ASP
54
HELX_P
B
GLY
206
B
GLY
63
1
9
10
B
THR
210
B
THR
67
HELX_P
B
CYS
218
B
CYS
75
1
10
9
VIRAL PROTEIN
HIV-1 capsid, C-terminal domain, VIRAL PROTEIN
POL_HV1H2
UNP
1
276
P04585
MYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGG
PGHKARVL
276
363
2KOD
144
231
P04585
A
1
1
88
276
363
2KOD
144
231
P04585
B
1
1
88