1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Mineev, K.S. Bocharov, E.V. Goncharuk, M.V. Arseniev, A.S. Volynsky, P.E. Efremov, R.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking RU Acta Naturae 2075-8251 3 90 98 22649687 Dimeric structure of the transmembrane domain of glycophorin a in lipidic and detergent environments. 2011 3160.857 Glycophorin-A transmembrane segment (UNP residues 89-117) 2 man polymer PAS-2, Sialoglycoprotein alpha, MN sialoglycoprotein no no EPEITLIIFGVMAGVIGTILLISYGIRRL EPEITLIIFGVMAGVIGTILLISYGIRRL A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample GYPA, GPA 9606 Homo sapiens 562 Escherichia coli pGEMEX repository Initial release Version format compliance Database references 1 0 2010-09-22 1 1 2011-07-13 1 2 2012-07-25 NMR assignment BMRB Y RCSB 2009-10-13 REL REL target function 200 20 2D 1H-15N HSQC 2D 1H-13C HSQC 3D CBCA(CO)NH 3D HNCO 3D HNCA 3D HN(CO)CA 3D 1H-15N NOESY 3D 1H-13C NOESY 3D HCCH-TOCSY 3 mM [U-100% 13C; U-100% 15N] 3 mM 180 mM [U-2H] 0 5.5 ambient 313 K CYANA torsion angle dynamics 1 fewest violations 3 mM [U-100% 13C; U-100% 15N] GpA, 3 mM GpA, 180 mM [U-2H] DPC, 95% H2O/5% D2O 95% H2O/5% D2O Guntert, Mumenthaler and Wuthrich structure solution CYANA 2.1 Guntert, Mumenthaler and Wuthrich refinement CYANA 2.1 600 Varian UNITY Varian Unity GLU 70 n 1 GLU 70 A PRO 71 n 2 PRO 71 A GLU 72 n 3 GLU 72 A ILE 73 n 4 ILE 73 A THR 74 n 5 THR 74 A LEU 75 n 6 LEU 75 A ILE 76 n 7 ILE 76 A ILE 77 n 8 ILE 77 A PHE 78 n 9 PHE 78 A GLY 79 n 10 GLY 79 A VAL 80 n 11 VAL 80 A MET 81 n 12 MET 81 A ALA 82 n 13 ALA 82 A GLY 83 n 14 GLY 83 A VAL 84 n 15 VAL 84 A ILE 85 n 16 ILE 85 A GLY 86 n 17 GLY 86 A THR 87 n 18 THR 87 A ILE 88 n 19 ILE 88 A LEU 89 n 20 LEU 89 A LEU 90 n 21 LEU 90 A ILE 91 n 22 ILE 91 A SER 92 n 23 SER 92 A TYR 93 n 24 TYR 93 A GLY 94 n 25 GLY 94 A ILE 95 n 26 ILE 95 A ARG 96 n 27 ARG 96 A ARG 97 n 28 ARG 97 A LEU 98 n 29 LEU 98 A GLU 70 n 1 GLU 70 B PRO 71 n 2 PRO 71 B GLU 72 n 3 GLU 72 B ILE 73 n 4 ILE 73 B THR 74 n 5 THR 74 B LEU 75 n 6 LEU 75 B ILE 76 n 7 ILE 76 B ILE 77 n 8 ILE 77 B PHE 78 n 9 PHE 78 B GLY 79 n 10 GLY 79 B VAL 80 n 11 VAL 80 B MET 81 n 12 MET 81 B ALA 82 n 13 ALA 82 B GLY 83 n 14 GLY 83 B VAL 84 n 15 VAL 84 B ILE 85 n 16 ILE 85 B GLY 86 n 17 GLY 86 B THR 87 n 18 THR 87 B ILE 88 n 19 ILE 88 B LEU 89 n 20 LEU 89 B LEU 90 n 21 LEU 90 B ILE 91 n 22 ILE 91 B SER 92 n 23 SER 92 B TYR 93 n 24 TYR 93 B GLY 94 n 25 GLY 94 B ILE 95 n 26 ILE 95 B ARG 96 n 27 ARG 96 B ARG 97 n 28 ARG 97 B LEU 98 n 29 LEU 98 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B GLU 72 71.65 -69.45 1 B ARG 97 -145.76 42.95 2 A PRO 71 -69.79 97.00 2 A GLU 72 -164.08 -48.72 2 A ARG 97 -155.22 43.92 2 B GLU 72 -126.21 -51.54 2 B ARG 97 -145.01 43.35 3 A PRO 71 -69.83 90.01 3 A GLU 72 -179.20 -49.28 3 A ARG 97 -143.67 37.44 4 A PRO 71 -69.76 78.57 4 A ILE 95 -156.50 -48.25 4 B ARG 97 -145.54 59.47 5 A PRO 71 -69.75 -179.46 5 A ILE 95 -156.57 -52.44 5 A ARG 97 -153.10 26.70 5 B PRO 71 -69.79 -178.24 5 B GLU 72 69.11 -75.77 6 A PRO 71 -69.76 78.80 6 A ILE 95 -156.60 -49.91 6 B ARG 97 -144.79 -67.46 7 A ILE 95 -156.53 -52.13 7 B PRO 71 -69.74 -171.00 7 B ILE 95 -156.59 -45.88 8 A PRO 71 -69.75 -171.20 8 A ARG 97 -144.18 -69.80 8 B PRO 71 -69.81 82.12 8 B ARG 97 -149.43 -48.43 9 A ILE 95 -156.58 -48.21 9 B PRO 71 -69.76 78.89 10 A PRO 71 -69.74 -171.06 10 A ILE 95 -156.47 -52.63 10 A ARG 97 -147.35 26.98 10 B PRO 71 -69.80 -177.04 10 B GLU 72 69.26 -75.36 10 B ARG 97 -147.44 41.14 11 A GLU 72 71.57 -69.26 11 A ILE 95 -156.45 -40.50 11 B GLU 72 71.57 -69.44 11 B ARG 97 -145.04 41.45 12 A ILE 95 -156.57 -52.86 13 A GLU 72 -177.74 -51.42 13 B GLU 72 177.52 -45.58 14 A PRO 71 -69.74 -173.44 14 A ARG 96 -174.47 -36.06 14 B GLU 72 -171.31 -63.86 14 B ARG 97 -94.20 40.42 16 A GLU 72 -162.37 89.55 16 B PRO 71 -69.81 78.50 17 A ARG 96 -159.01 -38.35 18 A PRO 71 -69.81 -170.40 18 A ILE 95 -156.45 -51.09 18 A ARG 97 -144.88 27.50 18 B ARG 97 -145.19 42.74 19 A GLU 72 -132.42 -43.35 19 A ARG 97 -145.05 43.08 19 B GLU 72 69.31 -75.26 19 B ILE 95 -156.39 -50.15 20 A GLU 72 52.03 72.13 20 A ILE 95 -156.49 -40.42 20 A ARG 97 -150.80 35.27 20 B GLU 72 -149.62 -49.64 Glycophorin-A fewest violations, model 1 Refined structure of Glycophorin A transmembrane segment dimer in DPC micelles 1 N N 1 N N A GLU 72 A GLU 3 HELX_P A LEU 98 A LEU 29 1 1 27 B GLU 72 B GLU 3 HELX_P B ARG 97 B ARG 28 1 2 26 MEMBRANE PROTEIN Glycophorin A, transmembrane dimer, micelles, Blood group antigen, Cell membrane, Glycoprotein, Host-virus interaction, Membrane, Sialic acid, Transmembrane, MEMBRANE PROTEIN GLPA_HUMAN UNP 1 89 P02724 EPEITLIIFGVMAGVIGTILLISYGIRRL 89 117 2KPE 70 98 P02724 A 1 1 29 89 117 2KPE 70 98 P02724 B 1 1 29