1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Bilbille, Y. Agris, P.F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C10 H13 N4 O8 P 348.206 y INOSINIC ACID RNA linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking To be Published 0353 Solution structure of the tRNA-Arg2 (ICG) ASL 5442.302 RNA (5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3') 1 syn polymer no no CUCGGCUICGAACCGAG CUCGGCUICGAACCGAG A polyribonucleotide n n n n n n n n n n n n n n n n n 33.318 1 19 A 1 A 17 -5.709 A_C1:G17_A 1 -26.716 0.114 -0.193 0.050 9.984 1 20 A 2 A 16 -6.894 A_U2:A16_A 2 -15.108 -0.065 0.426 -0.100 27.444 1 19 A 3 A 15 -2.719 A_C3:G15_A 3 -12.531 -0.041 0.339 -0.098 17.881 1 19 A 4 A 14 -2.652 A_G4:C14_A 4 -22.312 -0.176 0.287 -0.207 -5.954 1 19 A 5 A 13 2.755 A_G5:C13_A 5 -21.193 0.020 -0.619 -0.143 -6.750 A 6 A 12 -3.821 A_C6:A12_A 6 -3.760 2.802 -0.426 -0.346 2.976 45.039 A A 1 2 39.955 A A 17 16 4.178 28.473 -1.002 -0.576 AA_C1U2:A16G17_AA 1 -1.220 1.712 35.244 -3.944 1.171 3.027 32.827 A A 2 3 6.185 A A 16 15 3.066 3.488 0.655 -0.402 AA_U2C3:G15A16_AA 2 1.055 -1.870 32.630 -1.271 -0.989 2.712 33.686 A A 3 4 28.801 A A 15 14 3.550 16.010 -0.010 -0.869 AA_C3G4:C14G15_AA 3 3.908 -7.031 29.482 -4.174 0.670 4.332 34.067 A A 4 5 8.058 A A 14 13 4.419 4.690 0.812 -0.882 AA_G4G5:C13C14_AA 4 5.031 -8.644 33.385 -2.514 -0.304 3.108 48.740 A A 5 6 9.642 A A 13 12 3.332 7.926 -0.537 -1.184 AA_G5C6:A12C13_AA 5 0.398 -0.484 48.129 -2.034 0.681 repository Initial release Version format compliance 1 0 2010-12-01 1 1 2011-07-13 BMRB Y RCSB 2009-12-22 REL REL structures with the lowest energy 100 10 2D 1H-1H NOESY 2D 1H-1H NOESY 2D DQF-COSY 2D 1H-1H COSY 2D 1H-1H TOCSY 2D 1H-13C HSQC 2D 1H-31P HETCOR 1.2 mM 1.2 mM 20 6.8 ambient 298 K simulated annealing 1 closest to the average 1.2 mM RNA (5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3')-1, 90% H2O/10% D2O 90% H2O/10% D2O 1.2 mM RNA (5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3')-2, 100% D2O 100% D2O Bruker Biospin collection xwinnmr Varian collection VNMRJ Bruker Biospin collection TOPSPIN Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRPipe Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax data analysis NMRDraw Goddard data analysis SPARKY Goddard chemical shift assignment SPARKY Goddard peak picking SPARKY Brunger, Adams, Clore, Gros, Nilges and Read structure solution CNS 1.21 Koradi, Billeter and Wuthrich data analysis Molmol Brunger, Adams, Clore, Gros, Nilges and Read refinement CNS 1.21 600 Varian INOVA Varian INOVA 500 Bruker DMX Bruker DMX C 1 n 1 C 1 A U 2 n 2 U 2 A C 3 n 3 C 3 A G 4 n 4 G 4 A G 5 n 5 G 5 A C 6 n 6 C 6 A U 7 n 7 U 7 A I 8 n 8 I 8 A C 9 n 9 C 9 A G 10 n 10 G 10 A A 11 n 11 A 11 A A 12 n 12 A 12 A C 13 n 13 C 13 A C 14 n 14 C 14 A G 15 n 15 G 15 A A 16 n 16 A 16 A G 17 n 17 G 17 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3' Solution structure of the tRNA-Arg2 (ICG) ASL. 1 N N hydrog WATSON-CRICK A C 1 A N3 C 1 1_555 A G 17 A N1 G 17 1_555 hydrog WATSON-CRICK A C 1 A N4 C 1 1_555 A G 17 A O6 G 17 1_555 hydrog WATSON-CRICK A C 1 A O2 C 1 1_555 A G 17 A N2 G 17 1_555 hydrog WATSON-CRICK A U 2 A N3 U 2 1_555 A A 16 A N1 A 16 1_555 hydrog WATSON-CRICK A U 2 A O4 U 2 1_555 A A 16 A N6 A 16 1_555 hydrog WATSON-CRICK A C 3 A N3 C 3 1_555 A G 15 A N1 G 15 1_555 hydrog WATSON-CRICK A C 3 A N4 C 3 1_555 A G 15 A O6 G 15 1_555 hydrog WATSON-CRICK A C 3 A O2 C 3 1_555 A G 15 A N2 G 15 1_555 hydrog WATSON-CRICK A G 4 A N1 G 4 1_555 A C 14 A N3 C 14 1_555 hydrog WATSON-CRICK A G 4 A N2 G 4 1_555 A C 14 A O2 C 14 1_555 hydrog WATSON-CRICK A G 4 A O6 G 4 1_555 A C 14 A N4 C 14 1_555 hydrog WATSON-CRICK A G 5 A N1 G 5 1_555 A C 13 A N3 C 13 1_555 hydrog WATSON-CRICK A G 5 A N2 G 5 1_555 A C 13 A O2 C 13 1_555 hydrog WATSON-CRICK A G 5 A O6 G 5 1_555 A C 13 A N4 C 13 1_555 hydrog C-A MISPAIR A C 6 A N3 C 6 1_555 A A 12 A N6 A 12 1_555 RNA RNA, modification, tRNA, inosine, ASL 2KRQ PDB 1 2KRQ CUCGGCUICGAACCGAG 1 17 2KRQ 1 17 2KRQ A 1 1 17