1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Bilbille, Y.
Agris, P.F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C10 H14 N5 O7 P
347.221
y
ADENOSINE-5'-MONOPHOSPHATE
RNA linking
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
C10 H13 N4 O8 P
348.206
y
INOSINIC ACID
RNA linking
C9 H13 N2 O9 P
324.181
y
URIDINE-5'-MONOPHOSPHATE
RNA linking
To be Published
0353
Solution structure of the tRNA-Arg2 (ICG) ASL
5442.302
RNA (5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3')
1
syn
polymer
no
no
CUCGGCUICGAACCGAG
CUCGGCUICGAACCGAG
A
polyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
33.318
1
19
A
1
A
17
-5.709
A_C1:G17_A
1
-26.716
0.114
-0.193
0.050
9.984
1
20
A
2
A
16
-6.894
A_U2:A16_A
2
-15.108
-0.065
0.426
-0.100
27.444
1
19
A
3
A
15
-2.719
A_C3:G15_A
3
-12.531
-0.041
0.339
-0.098
17.881
1
19
A
4
A
14
-2.652
A_G4:C14_A
4
-22.312
-0.176
0.287
-0.207
-5.954
1
19
A
5
A
13
2.755
A_G5:C13_A
5
-21.193
0.020
-0.619
-0.143
-6.750
A
6
A
12
-3.821
A_C6:A12_A
6
-3.760
2.802
-0.426
-0.346
2.976
45.039
A
A
1
2
39.955
A
A
17
16
4.178
28.473
-1.002
-0.576
AA_C1U2:A16G17_AA
1
-1.220
1.712
35.244
-3.944
1.171
3.027
32.827
A
A
2
3
6.185
A
A
16
15
3.066
3.488
0.655
-0.402
AA_U2C3:G15A16_AA
2
1.055
-1.870
32.630
-1.271
-0.989
2.712
33.686
A
A
3
4
28.801
A
A
15
14
3.550
16.010
-0.010
-0.869
AA_C3G4:C14G15_AA
3
3.908
-7.031
29.482
-4.174
0.670
4.332
34.067
A
A
4
5
8.058
A
A
14
13
4.419
4.690
0.812
-0.882
AA_G4G5:C13C14_AA
4
5.031
-8.644
33.385
-2.514
-0.304
3.108
48.740
A
A
5
6
9.642
A
A
13
12
3.332
7.926
-0.537
-1.184
AA_G5C6:A12C13_AA
5
0.398
-0.484
48.129
-2.034
0.681
repository
Initial release
Version format compliance
1
0
2010-12-01
1
1
2011-07-13
BMRB
Y
RCSB
2009-12-22
REL
REL
structures with the lowest energy
100
10
2D 1H-1H NOESY
2D 1H-1H NOESY
2D DQF-COSY
2D 1H-1H COSY
2D 1H-1H TOCSY
2D 1H-13C HSQC
2D 1H-31P HETCOR
1.2
mM
1.2
mM
20
6.8
ambient
298
K
simulated annealing
1
closest to the average
1.2 mM RNA (5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3')-1, 90% H2O/10% D2O
90% H2O/10% D2O
1.2 mM RNA (5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3')-2, 100% D2O
100% D2O
Bruker Biospin
collection
xwinnmr
Varian
collection
VNMRJ
Bruker Biospin
collection
TOPSPIN
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
data analysis
NMRDraw
Goddard
data analysis
SPARKY
Goddard
chemical shift assignment
SPARKY
Goddard
peak picking
SPARKY
Brunger, Adams, Clore, Gros, Nilges and Read
structure solution
CNS
1.21
Koradi, Billeter and Wuthrich
data analysis
Molmol
Brunger, Adams, Clore, Gros, Nilges and Read
refinement
CNS
1.21
600
Varian
INOVA
Varian INOVA
500
Bruker
DMX
Bruker DMX
C
1
n
1
C
1
A
U
2
n
2
U
2
A
C
3
n
3
C
3
A
G
4
n
4
G
4
A
G
5
n
5
G
5
A
C
6
n
6
C
6
A
U
7
n
7
U
7
A
I
8
n
8
I
8
A
C
9
n
9
C
9
A
G
10
n
10
G
10
A
A
11
n
11
A
11
A
A
12
n
12
A
12
A
C
13
n
13
C
13
A
C
14
n
14
C
14
A
G
15
n
15
G
15
A
A
16
n
16
A
16
A
G
17
n
17
G
17
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
5'-R(*CP*UP*CP*GP*GP*CP*UP*IP*CP*GP*AP*AP*CP*CP*GP*AP*G)-3'
Solution structure of the tRNA-Arg2 (ICG) ASL.
1
N
N
hydrog
WATSON-CRICK
A
C
1
A
N3
C
1
1_555
A
G
17
A
N1
G
17
1_555
hydrog
WATSON-CRICK
A
C
1
A
N4
C
1
1_555
A
G
17
A
O6
G
17
1_555
hydrog
WATSON-CRICK
A
C
1
A
O2
C
1
1_555
A
G
17
A
N2
G
17
1_555
hydrog
WATSON-CRICK
A
U
2
A
N3
U
2
1_555
A
A
16
A
N1
A
16
1_555
hydrog
WATSON-CRICK
A
U
2
A
O4
U
2
1_555
A
A
16
A
N6
A
16
1_555
hydrog
WATSON-CRICK
A
C
3
A
N3
C
3
1_555
A
G
15
A
N1
G
15
1_555
hydrog
WATSON-CRICK
A
C
3
A
N4
C
3
1_555
A
G
15
A
O6
G
15
1_555
hydrog
WATSON-CRICK
A
C
3
A
O2
C
3
1_555
A
G
15
A
N2
G
15
1_555
hydrog
WATSON-CRICK
A
G
4
A
N1
G
4
1_555
A
C
14
A
N3
C
14
1_555
hydrog
WATSON-CRICK
A
G
4
A
N2
G
4
1_555
A
C
14
A
O2
C
14
1_555
hydrog
WATSON-CRICK
A
G
4
A
O6
G
4
1_555
A
C
14
A
N4
C
14
1_555
hydrog
WATSON-CRICK
A
G
5
A
N1
G
5
1_555
A
C
13
A
N3
C
13
1_555
hydrog
WATSON-CRICK
A
G
5
A
N2
G
5
1_555
A
C
13
A
O2
C
13
1_555
hydrog
WATSON-CRICK
A
G
5
A
O6
G
5
1_555
A
C
13
A
N4
C
13
1_555
hydrog
C-A MISPAIR
A
C
6
A
N3
C
6
1_555
A
A
12
A
N6
A
12
1_555
RNA
RNA, modification, tRNA, inosine, ASL
2KRQ
PDB
1
2KRQ
CUCGGCUICGAACCGAG
1
17
2KRQ
1
17
2KRQ
A
1
1
17