1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Vuletich, D.A. Falzone, C.J. Lecomte, J.T.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C34 H34 Fe N4 O4 618.503 HEME B/C HYBRID BETWEEN B AND C TYPE HEMES (PROTOPORPHYRIN IX CONTAINING FE) non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 49 7000 7011 10.1021/bi100463d 20669934 Functional and structural characterization of the 2/2 hemoglobin from Synechococcus sp. PCC 7002. 2010 NE BIOMOL.NMR ASSIGN. 1874-2718 3 211 214 (1)H, (15)N, and (13)C resonance assignments of the 2/2 hemoglobin from the cyanobacterium Synechococcus sp. PCC 7002 in the ferric bis-histidine state 2009 13742.418 Cyanoglobin 1 man polymer 618.503 HEME B/C 1 syn non-polymer no no ASLYEKLGGAAAVDLAVEKFYGKVLADERVNRFFVNTDMAKQKQHQKDFMTYAFGGTDRFPGRSMRAAHQDLVENAGLTD VHFDAIAENLVLTLQELNVSQDLIDEVVTIVGSVQHRNDVLNR ASLYEKLGGAAAVDLAVEKFYGKVLADERVNRFFVNTDMAKQKQHQKDFMTYAFGGTDRFPGRSMRAAHQDLVENAGLTD VHFDAIAENLVLTLQELNVSQDLIDEVVTIVGSVQHRNDVLNR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Agmenellum quadruplicatum PCC 7002 sample glbN, SYNPCC7002_A1621 32049 Synechococcus sp. 562 Escherichia coli BL21(DE3) pET3c database_2 pdbx_database_status pdbx_nmr_software struct_conn repository Initial release Version format compliance Data collection Database references Derived calculations Other 1 0 2010-02-09 1 1 2011-07-13 1 2 2020-02-26 _pdbx_database_status.status_code_cs _pdbx_nmr_software.name _struct_conn.pdbx_leaving_atom_flag chemical shifts BMRB Y RCSB 2010-01-02 REL REL REL HEB HEME B/C structures with the least restraint violations 30 16 3D 1H-15N NOESY 3D 1H-13C NOESY 2D 1H-1H NOESY 2D 1H-1H NOESY 3D HNHA 1-2 mM 1-4 mM 1-2 mM [U-100% 15N] 0.6-1.4 mM [U-100% 13C; U-100% 15N] 0.025 7.2 ambient 298 K 100 conformers, 30 conformers from 3/100 lowest energy DGSA refined conformers DGSA-distance geometry simulated annealing, torsion angle dynamics 1 minimized average 1-2 mM holoprotein, 90% H2O/10% D2O 90% H2O/10% D2O 1-4 mM holoprotein, 100% D2O 100% D2O 1-2 mM [U-100% 15N] holoprotein, 90% H2O/10% D2O 90% H2O/10% D2O 0.6-1.4 mM [U-100% 13C; U-100% 15N] holoprotein, 90% H2O/10% D2O 90% H2O/10% D2O Schwieters, Kuszewski, Tjandra and Clore structure solution X-PLOR NIH 2.23 Schwieters, Kuszewski, Tjandra and Clore refinement X-PLOR NIH 2.23 600 Bruker DRX Bruker DRX HEB 125 2 HEB HEB 125 A ALA 2 n 1 ALA 2 A SER 3 n 2 SER 3 A LEU 4 n 3 LEU 4 A TYR 5 n 4 TYR 5 A GLU 6 n 5 GLU 6 A LYS 7 n 6 LYS 7 A LEU 8 n 7 LEU 8 A GLY 9 n 8 GLY 9 A GLY 10 n 9 GLY 10 A ALA 11 n 10 ALA 11 A ALA 12 n 11 ALA 12 A ALA 13 n 12 ALA 13 A VAL 14 n 13 VAL 14 A ASP 15 n 14 ASP 15 A LEU 16 n 15 LEU 16 A ALA 17 n 16 ALA 17 A VAL 18 n 17 VAL 18 A GLU 19 n 18 GLU 19 A LYS 20 n 19 LYS 20 A PHE 21 n 20 PHE 21 A TYR 22 n 21 TYR 22 A GLY 23 n 22 GLY 23 A LYS 24 n 23 LYS 24 A VAL 25 n 24 VAL 25 A LEU 26 n 25 LEU 26 A ALA 27 n 26 ALA 27 A ASP 28 n 27 ASP 28 A GLU 29 n 28 GLU 29 A ARG 30 n 29 ARG 30 A VAL 31 n 30 VAL 31 A ASN 32 n 31 ASN 32 A ARG 33 n 32 ARG 33 A PHE 34 n 33 PHE 34 A PHE 35 n 34 PHE 35 A VAL 36 n 35 VAL 36 A ASN 37 n 36 ASN 37 A THR 38 n 37 THR 38 A ASP 39 n 38 ASP 39 A MET 40 n 39 MET 40 A ALA 41 n 40 ALA 41 A LYS 42 n 41 LYS 42 A GLN 43 n 42 GLN 43 A LYS 44 n 43 LYS 44 A GLN 45 n 44 GLN 45 A HIS 46 n 45 HIS 46 A GLN 47 n 46 GLN 47 A LYS 48 n 47 LYS 48 A ASP 49 n 48 ASP 49 A PHE 50 n 49 PHE 50 A MET 51 n 50 MET 51 A THR 52 n 51 THR 52 A TYR 53 n 52 TYR 53 A ALA 54 n 53 ALA 54 A PHE 55 n 54 PHE 55 A GLY 56 n 55 GLY 56 A GLY 57 n 56 GLY 57 A THR 58 n 57 THR 58 A ASP 59 n 58 ASP 59 A ARG 60 n 59 ARG 60 A PHE 61 n 60 PHE 61 A PRO 62 n 61 PRO 62 A GLY 63 n 62 GLY 63 A ARG 64 n 63 ARG 64 A SER 65 n 64 SER 65 A MET 66 n 65 MET 66 A ARG 67 n 66 ARG 67 A ALA 68 n 67 ALA 68 A ALA 69 n 68 ALA 69 A HIS 70 n 69 HIS 70 A GLN 71 n 70 GLN 71 A ASP 72 n 71 ASP 72 A LEU 73 n 72 LEU 73 A VAL 74 n 73 VAL 74 A GLU 75 n 74 GLU 75 A ASN 76 n 75 ASN 76 A ALA 77 n 76 ALA 77 A GLY 78 n 77 GLY 78 A LEU 79 n 78 LEU 79 A THR 80 n 79 THR 80 A ASP 81 n 80 ASP 81 A VAL 82 n 81 VAL 82 A HIS 83 n 82 HIS 83 A PHE 84 n 83 PHE 84 A ASP 85 n 84 ASP 85 A ALA 86 n 85 ALA 86 A ILE 87 n 86 ILE 87 A ALA 88 n 87 ALA 88 A GLU 89 n 88 GLU 89 A ASN 90 n 89 ASN 90 A LEU 91 n 90 LEU 91 A VAL 92 n 91 VAL 92 A LEU 93 n 92 LEU 93 A THR 94 n 93 THR 94 A LEU 95 n 94 LEU 95 A GLN 96 n 95 GLN 96 A GLU 97 n 96 GLU 97 A LEU 98 n 97 LEU 98 A ASN 99 n 98 ASN 99 A VAL 100 n 99 VAL 100 A SER 101 n 100 SER 101 A GLN 102 n 101 GLN 102 A ASP 103 n 102 ASP 103 A LEU 104 n 103 LEU 104 A ILE 105 n 104 ILE 105 A ASP 106 n 105 ASP 106 A GLU 107 n 106 GLU 107 A VAL 108 n 107 VAL 108 A VAL 109 n 108 VAL 109 A THR 110 n 109 THR 110 A ILE 111 n 110 ILE 111 A VAL 112 n 111 VAL 112 A GLY 113 n 112 GLY 113 A SER 114 n 113 SER 114 A VAL 115 n 114 VAL 115 A GLN 116 n 115 GLN 116 A HIS 117 n 116 HIS 117 A ARG 118 n 117 ARG 118 A ASN 119 n 118 ASN 119 A ASP 120 n 119 ASP 120 A VAL 121 n 120 VAL 121 A LEU 122 n 121 LEU 122 A ASN 123 n 122 ASN 123 A ARG 124 n 123 ARG 124 A author_defined_assembly 1 monomeric A HIS 46 A NE2 HIS 45 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B NA HEB 1_555 102.3 A HIS 46 A NE2 HIS 45 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B NB HEB 1_555 101.9 A HEB 125 B NA HEB 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B NB HEB 1_555 90.1 A HIS 46 A NE2 HIS 45 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B NC HEB 1_555 77.6 A HEB 125 B NA HEB 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B NC HEB 1_555 179.9 A HEB 125 B NB HEB 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B NC HEB 1_555 89.9 A HIS 46 A NE2 HIS 45 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B ND HEB 1_555 77.9 A HEB 125 B NA HEB 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B ND HEB 1_555 90.0 A HEB 125 B NB HEB 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B ND HEB 1_555 179.8 A HEB 125 B NC HEB 1_555 A HEB 125 B FE HEB 1_555 A HEB 125 B ND HEB 1_555 89.9 A HIS 46 A NE2 HIS 45 1_555 A HEB 125 B FE HEB 1_555 A HIS 70 A NE2 HIS 69 1_555 154.4 A HEB 125 B NA HEB 1_555 A HEB 125 B FE HEB 1_555 A HIS 70 A NE2 HIS 69 1_555 100.2 A HEB 125 B NB HEB 1_555 A HEB 125 B FE HEB 1_555 A HIS 70 A NE2 HIS 69 1_555 90.0 A HEB 125 B NC HEB 1_555 A HEB 125 B FE HEB 1_555 A HIS 70 A NE2 HIS 69 1_555 79.8 A HEB 125 B ND HEB 1_555 A HEB 125 B FE HEB 1_555 A HIS 70 A NE2 HIS 69 1_555 90.1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 6 A A O H TYR GLY 5 9 1.59 10 A A H2 H ALA SER 2 3 1.27 13 A A O H THR PHE 58 61 1.59 1 A PHE 35 -79.70 25.61 1 A TYR 53 -49.88 -17.91 1 A THR 58 -78.62 31.06 1 A PHE 61 -159.64 59.47 1 A PRO 62 -74.29 34.54 1 A ARG 64 61.00 -73.63 1 A VAL 82 -44.99 -17.57 1 A SER 101 -45.58 160.82 1 A ASN 123 54.19 95.31 2 A ASP 59 25.91 39.05 2 A ARG 60 53.36 115.09 2 A SER 65 92.30 119.89 3 A ARG 60 -95.21 -132.98 3 A PHE 61 35.13 72.20 3 A ARG 64 36.89 -153.58 4 A SER 65 -176.44 44.97 4 A ASN 76 -90.30 -60.89 5 A ASP 59 -72.54 21.30 5 A ARG 60 61.40 94.26 5 A SER 65 -101.62 77.93 5 A ASN 76 -91.31 -61.38 6 A SER 65 -173.16 36.11 6 A SER 114 -38.62 112.72 7 A ARG 60 71.24 -4.43 7 A ARG 64 -120.23 -105.85 7 A SER 65 51.68 6.27 7 A ASN 76 -92.77 -61.76 8 A ARG 64 34.83 77.70 8 A SER 65 168.09 -35.19 9 A ARG 60 -168.86 80.80 9 A ARG 64 -97.66 -68.78 10 A ARG 60 -159.57 82.56 10 A PHE 61 -135.26 -63.65 10 A PRO 62 -49.63 -13.91 10 A SER 65 34.81 88.11 11 A ARG 60 179.48 54.40 11 A ARG 64 67.60 -130.24 11 A ASN 76 -95.24 -61.81 12 A ARG 60 58.49 -160.88 12 A ARG 64 -116.02 -98.02 12 A SER 65 34.99 26.79 12 A ASN 76 -92.04 -60.55 13 A ASP 59 37.14 -110.43 13 A PRO 62 -47.50 -16.79 13 A SER 65 151.79 -8.65 13 A ASN 76 -91.50 -61.79 14 A ASP 59 34.44 -97.72 14 A PRO 62 -35.66 141.04 15 A ARG 60 31.27 79.92 15 A ARG 64 -99.02 -66.38 15 A ASN 76 -92.18 -61.26 16 A ASP 59 33.66 -87.80 16 A ARG 60 -168.93 -42.29 16 A PHE 61 56.02 155.92 16 A ASN 76 -92.33 -61.30 Cyanoglobin minimized average, model 1 minimized average Solution structure of Synechococcus sp. PCC 7002 hemoglobin 1 N N 2 N N A SER 3 A SER 2 HELX_P A GLY 9 A GLY 8 1 1 7 A ALA 11 A ALA 10 HELX_P A ASP 28 A ASP 27 1 2 18 A ASP 28 A ASP 27 HELX_P A ARG 33 A ARG 32 1 3 6 A PHE 34 A PHE 33 HELX_P A ASN 37 A ASN 36 5 4 4 A ASP 39 A ASP 38 HELX_P A PHE 55 A PHE 54 1 5 17 A ARG 64 A ARG 63 HELX_P A ALA 77 A ALA 76 1 6 14 A THR 80 A THR 79 HELX_P A LEU 98 A LEU 97 1 7 19 A SER 101 A SER 100 HELX_P A GLY 113 A GLY 112 1 8 13 A SER 114 A SER 113 HELX_P A ASN 123 A ASN 122 1 9 10 metalc 2.256 A HIS 46 A NE2 HIS 45 1_555 A HEB 125 B FE HEB 1_555 metalc 2.256 A HIS 70 A NE2 HIS 69 1_555 A HEB 125 B FE HEB 1_555 covale 1.495 none A HIS 117 A NE2 HIS 116 1_555 A HEB 125 B CAB HEB 1_555 UNKNOWN FUNCTION hemeprotein, 2/2 hemoglobin, GlbN, trHbN, UNKNOWN FUNCTION Q8RT58_SYNP2 UNP 1 2 Q8RT58 ASLYEKLGGAAAVDLAVEKFYGKVLADERVNRFFVNTDMAKQKQHQKDFMTYAFGGTDRFPGRSMRAAHQDLVENAGLTD VHFDAIAENLVLTLQELNVSQDLIDEVVTIVGSVQHRNDVLNR 2 124 2KSC 2 124 Q8RT58 A 1 1 123 BINDING SITE FOR RESIDUE HEB A 125 Software 8 A THR 38 A THR 37 8 1_555 A HIS 46 A HIS 45 8 1_555 A PHE 50 A PHE 49 8 1_555 A TYR 53 A TYR 52 8 1_555 A MET 66 A MET 65 8 1_555 A HIS 70 A HIS 69 8 1_555 A LEU 73 A LEU 72 8 1_555 A HIS 117 A HIS 116 8 1_555 1 P 1