1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Quintal, S.M.O. Viegas, A.J.M. Cabrita, E.J. Farrell, N.P. Erhardt, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking Zn 2 65.409 ZINC ION non-polymer US Biochemistry BICHAW 0033 0006-2960 51 1752 1761 10.1021/bi201834g 22303928 Platinated DNA affects zinc finger conformation. Interaction of a platinated single-stranded oligonucleotide and the C-terminal zinc finger of nucleocapsid protein HIVNCp7. 2012 2230.612 C-terminal Zinc Knucle of the HIV-NCP7 1 syn polymer 65.409 ZINC ION 1 syn non-polymer no no KGCWKCGKEGHQMKDCTER KGCWKCGKEGHQMKDCTER A polypeptide(L) n n n n n n n n n n n n n n n n n n n pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer repository Initial release Database references Data collection Other 1 0 2011-10-12 1 1 2012-06-20 1 2 2020-02-05 _pdbx_database_status.status_code_cs _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model BMRB Y RCSB 2010-10-01 REL REL REL ZN ZINC ION 290 196 45 49 target function 20 20 2D 1H-1H TOCSY 2D DQF-COSY 2D 1H-1H NOESY 2D 1H-15N HSQC 1 mM 6 5.7 ambient 298 K DGSA-distance geometry simulated annealing 1 lowest energy 1 mM C-terminal zinc knuckle of the HIVNCp7, 90% H2O/10% D2O 90% H2O/10% D2O Guntert, Mumenthaler and Wuthrich refinement CYANA 2.1 Goddard peak picking Sparky 3.114 Goddard chemical shift assignment Sparky 3.114 600 Bruker AVANCE Bruker Avance 600 Bruker AVANCE Bruker Avance ZN 20 2 ZN ZN 20 A LYS 1 n 1 LYS 1 A GLY 2 n 2 GLY 2 A CYS 3 n 3 CYS 3 A TRP 4 n 4 TRP 4 A LYS 5 n 5 LYS 5 A CYS 6 n 6 CYS 6 A GLY 7 n 7 GLY 7 A LYS 8 n 8 LYS 8 A GLU 9 n 9 GLU 9 A GLY 10 n 10 GLY 10 A HIS 11 n 11 HIS 11 A GLN 12 n 12 GLN 12 A MET 13 n 13 MET 13 A LYS 14 n 14 LYS 14 A ASP 15 n 15 ASP 15 A CYS 16 n 16 CYS 16 A THR 17 n 17 THR 17 A GLU 18 n 18 GLU 18 A ARG 19 n 19 ARG 19 A author_defined_assembly 1 monomeric A HIS 11 A NE2 HIS 11 1_555 A ZN 20 B ZN ZN 1_555 A CYS 6 A SG CYS 6 1_555 120.7 A HIS 11 A NE2 HIS 11 1_555 A ZN 20 B ZN ZN 1_555 A CYS 3 A SG CYS 3 1_555 119.0 A CYS 6 A SG CYS 6 1_555 A ZN 20 B ZN ZN 1_555 A CYS 3 A SG CYS 3 1_555 101.4 A HIS 11 A NE2 HIS 11 1_555 A ZN 20 B ZN ZN 1_555 A CYS 16 A SG CYS 16 1_555 110.0 A CYS 6 A SG CYS 6 1_555 A ZN 20 B ZN ZN 1_555 A CYS 16 A SG CYS 16 1_555 104.8 A CYS 3 A SG CYS 3 1_555 A ZN 20 B ZN ZN 1_555 A CYS 16 A SG CYS 16 1_555 97.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A GLU 9 51.83 88.76 1 A THR 17 -90.10 47.02 2 A GLU 9 51.72 88.32 2 A THR 17 -91.22 45.00 3 A GLU 9 51.78 88.61 3 A THR 17 -89.51 47.84 4 A GLU 9 51.56 88.46 5 A CYS 3 -66.12 -167.18 5 A GLU 9 63.65 106.90 6 A CYS 6 -69.72 99.76 6 A GLU 9 53.88 91.05 7 A CYS 3 -67.92 -168.70 7 A GLU 9 51.87 88.70 8 A CYS 3 -69.28 -168.47 8 A GLU 9 52.25 89.09 9 A CYS 3 -66.55 -169.05 9 A GLU 9 51.91 88.89 10 A CYS 3 -75.09 -166.35 10 A GLU 9 59.86 99.66 11 A CYS 3 -66.13 -166.89 11 A GLU 9 60.26 100.81 12 A GLU 9 51.84 88.54 12 A THR 17 -89.44 47.67 13 A CYS 3 -65.90 -166.69 13 A GLU 9 60.41 100.92 13 A THR 17 -92.93 40.50 14 A GLU 9 51.72 87.76 15 A CYS 3 -66.52 -166.80 15 A GLU 9 51.37 88.22 16 A GLU 9 51.33 87.77 17 A CYS 3 -71.03 -167.45 17 A GLU 9 51.29 87.96 18 A CYS 3 -78.30 -168.91 18 A GLU 9 56.18 94.76 18 A THR 17 -88.47 49.30 19 A CYS 3 -66.90 -166.85 19 A GLU 9 61.18 102.58 19 A GLU 18 -49.67 152.28 20 A CYS 3 -65.64 -173.44 20 A GLU 9 61.36 100.42 C-terminal Zinc Knucle of the HIV-NCP7 C-terminal zinc knuckle of the HIVNCp7 1 N N 2 N N metalc 2.052 A HIS 11 A NE2 HIS 11 1_555 A ZN 20 B ZN ZN 1_555 metalc 2.273 A CYS 6 A SG CYS 6 1_555 A ZN 20 B ZN ZN 1_555 metalc 2.299 A CYS 3 A SG CYS 3 1_555 A ZN 20 B ZN ZN 1_555 metalc 2.367 A CYS 16 A SG CYS 16 1_555 A ZN 20 B ZN ZN 1_555 METAL BINDING PROTEIN NCP7, HIV, Platinum, METAL BINDING PROTEIN Q9YP46_9HIV1 UNP 1 411 Q9YP46 KGCWKCGKEGHQMKDCTER 411 429 2L44 1 19 Q9YP46 A 1 1 19 BINDING SITE FOR RESIDUE ZN A 20 Software 4 A CYS 3 A CYS 3 4 1_555 A CYS 6 A CYS 6 4 1_555 A HIS 11 A HIS 11 4 1_555 A CYS 16 A CYS 16 4 1_555 1 P 1