1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Zhao, J.
Pervushin, K.
Feng, S.
Droge, P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Mol.Biol.
1545-9993
18
169
176
10.1038/nsmb.1962
21217697
Alternate rRNA secondary structures as regulators of translation
2011
6943.069
Double-stranded RNA-specific adenosine deaminase
3.5.4.-
DRADA 1 domain, UNP residues 136-198
N43A, Y47A
1
man
polymer
DRADA, 136 kDa double-stranded RNA-binding protein, p136, Interferon-inducible protein 4, IFI-4, K88DSRBP
no
no
YQDQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEIARVLASLAKKGKLQKEAGTPPLWKIA
YQDQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEIARVLASLAKKGKLQKEAGTPPLWKIA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
ADAR, ADAR1, DSRAD, G1P1, IFI4
9606
Homo sapiens
562
Escherichia coli
pET17b
vector
repository
Initial release
Version format compliance
1
0
2011-01-12
1
1
2011-07-13
BMRB
Y
PDBJ
2010-10-24
REL
REL
target function
140
20
1
2D 1H-15N HSQC
3D HNCACB
3D 1H-15N NOESY
2D 1H-1H TOCSY
2D 1H-1H NOESY
50
mM
50
mM
6.8
ambient
298
K
simulated annealing
1
lowest energy
50 mM sodium phosphate-1, 50 mM sodium chloride-2, 95% H2O/5% D2O
95% H2O/5% D2O
Guntert, Mumenthaler and Wuthrich
structure solution
CYANA
Keller and Wuthrich
chemical shift assignment
CARA
Keller and Wuthrich
peak picking
CARA
Keller and Wuthrich
data analysis
CARA
Guntert, Mumenthaler and Wuthrich
refinement
CYANA
700
Bruker
Avance
Bruker Avance
TYR
6
n
1
TYR
6
A
GLN
7
n
2
GLN
7
A
ASP
8
n
3
ASP
8
A
GLN
9
n
4
GLN
9
A
GLU
10
n
5
GLU
10
A
GLN
11
n
6
GLN
11
A
ARG
12
n
7
ARG
12
A
ILE
13
n
8
ILE
13
A
LEU
14
n
9
LEU
14
A
LYS
15
n
10
LYS
15
A
PHE
16
n
11
PHE
16
A
LEU
17
n
12
LEU
17
A
GLU
18
n
13
GLU
18
A
GLU
19
n
14
GLU
19
A
LEU
20
n
15
LEU
20
A
GLY
21
n
16
GLY
21
A
GLU
22
n
17
GLU
22
A
GLY
23
n
18
GLY
23
A
LYS
24
n
19
LYS
24
A
ALA
25
n
20
ALA
25
A
THR
26
n
21
THR
26
A
THR
27
n
22
THR
27
A
ALA
28
n
23
ALA
28
A
HIS
29
n
24
HIS
29
A
ASP
30
n
25
ASP
30
A
LEU
31
n
26
LEU
31
A
SER
32
n
27
SER
32
A
GLY
33
n
28
GLY
33
A
LYS
34
n
29
LYS
34
A
LEU
35
n
30
LEU
35
A
GLY
36
n
31
GLY
36
A
THR
37
n
32
THR
37
A
PRO
38
n
33
PRO
38
A
LYS
39
n
34
LYS
39
A
LYS
40
n
35
LYS
40
A
GLU
41
n
36
GLU
41
A
ILE
42
n
37
ILE
42
A
ALA
43
n
38
ALA
43
A
ARG
44
n
39
ARG
44
A
VAL
45
n
40
VAL
45
A
LEU
46
n
41
LEU
46
A
ALA
47
n
42
ALA
47
A
SER
48
n
43
SER
48
A
LEU
49
n
44
LEU
49
A
ALA
50
n
45
ALA
50
A
LYS
51
n
46
LYS
51
A
LYS
52
n
47
LYS
52
A
GLY
53
n
48
GLY
53
A
LYS
54
n
49
LYS
54
A
LEU
55
n
50
LEU
55
A
GLN
56
n
51
GLN
56
A
LYS
57
n
52
LYS
57
A
GLU
58
n
53
GLU
58
A
ALA
59
n
54
ALA
59
A
GLY
60
n
55
GLY
60
A
THR
61
n
56
THR
61
A
PRO
62
n
57
PRO
62
A
PRO
63
n
58
PRO
63
A
LEU
64
n
59
LEU
64
A
TRP
65
n
60
TRP
65
A
LYS
66
n
61
LYS
66
A
ILE
67
n
62
ILE
67
A
ALA
68
n
63
ALA
68
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
56
A
N
GLN
51
A
O
LYS
66
A
O
LYS
61
1
A
GLN
7
-44.72
-178.81
1
A
ASP
8
-33.98
-36.59
1
A
GLU
58
-67.45
93.05
1
A
PRO
63
-69.77
90.96
2
A
GLN
7
-44.81
-178.75
2
A
ASP
8
-33.33
-37.30
2
A
GLU
58
-66.80
89.71
2
A
PRO
63
-69.72
86.31
2
A
LEU
64
178.98
179.19
3
A
GLN
7
-44.78
-178.95
3
A
ASP
8
-33.00
-37.84
3
A
GLU
58
-67.93
86.09
3
A
PRO
63
-69.72
86.46
3
A
LEU
64
178.74
-177.49
4
A
GLN
7
-44.85
-178.96
4
A
ASP
8
-32.66
-38.27
4
A
GLU
58
-66.45
94.01
4
A
PRO
63
-69.84
89.24
5
A
GLN
7
-43.47
-179.43
5
A
ASP
8
-32.61
-37.60
5
A
GLU
58
-67.14
91.92
5
A
PRO
63
-69.71
95.03
6
A
GLN
7
-45.01
-178.46
6
A
ASP
8
-32.11
-38.96
6
A
LYS
24
-100.37
-169.54
6
A
GLU
58
-67.32
87.92
6
A
PRO
63
-69.82
88.42
7
A
GLN
7
-44.75
-178.92
7
A
ASP
8
-33.28
-37.45
7
A
GLU
58
-67.43
87.96
7
A
PRO
63
-69.75
96.25
8
A
GLN
7
-45.00
-178.53
8
A
ASP
8
-32.05
-39.01
8
A
GLU
58
-68.18
87.41
8
A
PRO
63
-69.80
86.31
9
A
GLN
7
-44.60
178.14
9
A
ASP
8
-37.49
-33.60
9
A
PRO
63
-69.85
88.18
9
A
LEU
64
179.61
-175.42
9
A
TRP
65
-101.13
-169.08
10
A
GLN
7
-44.93
-178.46
10
A
ASP
8
-32.19
-39.35
10
A
LYS
24
-114.45
-169.35
10
A
GLU
58
-67.00
94.16
10
A
PRO
63
-69.78
89.84
11
A
GLN
7
-44.73
-179.07
11
A
ASP
8
-33.76
-36.89
11
A
PRO
63
-69.72
80.10
11
A
LEU
64
174.68
-174.67
12
A
GLN
7
-44.21
-179.12
12
A
ASP
8
-36.40
-34.42
12
A
PRO
63
-69.68
87.40
12
A
LEU
64
179.58
-171.14
13
A
GLN
7
-44.60
-179.10
13
A
ASP
8
-33.96
-36.64
13
A
GLU
58
-69.14
85.39
13
A
PRO
63
-69.77
90.89
14
A
GLN
7
-44.98
-178.57
14
A
ASP
8
-32.55
-38.37
14
A
GLU
58
-67.60
87.40
14
A
PRO
63
-69.72
84.06
14
A
LEU
64
177.63
-176.05
15
A
GLN
7
-44.91
-178.81
15
A
ASP
8
-32.62
-38.49
15
A
PRO
63
-69.78
85.37
15
A
LEU
64
-177.72
-175.87
16
A
GLN
7
-44.79
-178.77
16
A
ASP
8
-33.82
-37.14
16
A
PRO
63
-69.81
82.13
16
A
LEU
64
174.98
-174.31
17
A
GLN
7
-44.07
-179.25
17
A
ASP
8
-36.03
-34.87
17
A
GLU
58
-67.36
91.18
17
A
PRO
63
-69.72
96.46
18
A
GLN
7
-44.69
-178.91
18
A
ASP
8
-33.94
-36.79
18
A
PRO
63
-69.79
79.14
18
A
LEU
64
174.01
-174.33
19
A
GLN
7
-44.60
-179.16
19
A
ASP
8
-33.14
-37.68
19
A
PRO
63
-69.77
89.18
20
A
GLN
7
-44.67
-178.84
20
A
ASP
8
-34.26
-36.30
20
A
PRO
63
-69.76
86.92
20
A
LEU
64
179.41
-172.47
Double-stranded RNA-specific adenosine deaminase (E.C.3.5.4.- )
lowest energy, model 1
Solution structure of the Zalpha domain mutant of ADAR1 (N43A,Y47A)
1
N
N
A
GLN
7
A
GLN
2
HELX_P
A
GLY
21
A
GLY
16
1
1
15
A
THR
27
A
THR
22
HELX_P
A
LEU
35
A
LEU
30
1
2
9
A
PRO
38
A
PRO
33
HELX_P
A
ALA
50
A
ALA
45
1
3
13
A
LYS
51
A
LYS
46
HELX_P
A
GLY
53
A
GLY
48
5
4
3
HYDROLASE
HYDROLASE
DSRAD_HUMAN
UNP
1
136
P55265
YQDQEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLWKIA
136
198
2L54
6
68
P55265
A
1
1
63
1
ASN
ENGINEERED MUTATION
ALA
43
2L54
A
P55265
UNP
173
38
1
TYR
ENGINEERED MUTATION
ALA
47
2L54
A
P55265
UNP
177
42
2
anti-parallel
A
LEU
55
A
LEU
50
A
GLN
56
A
GLN
51
A
LYS
66
A
LYS
61
A
ILE
67
A
ILE
62