1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Mineev, K.S.
Arseniev, A.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
NE
Biochim. Biophys. Acta
BBACAQ
0113
0006-3002
1808
2081
2088
10.1016/j.bbamem.2011.04.017
21575594
Spatial structure and dimer--monomer equilibrium of the ErbB3 transmembrane domain in DPC micelles.
2011
10.2210/pdb2l9u/pdb
pdb_00002l9u
4703.660
Receptor tyrosine-protein kinase erbB-3
2.7.10.1
UNP RESIDUES 640-670
K639R
2
man
polymer
Proto-oncogene-like protein c-ErbB-3, Tyrosine kinase-type cell surface receptor HER3
no
no
MGRTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRHHHHHH
MGRTHLTMALTVIAGLVVIFMMLGGTFLYWRGRRHHHHHH
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
ERBB3, HER3
9606
Homo sapiens
cell-free synthesis
pET-22b
vector
Spatial structure of dimeric ErbB3 transmembrane domain
citation
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
struct_ref_seq_dif
repository
Initial release
Version format compliance
Database references
Data collection
Database references
Other
1
0
2011-05-18
1
1
2011-07-13
1
2
2017-09-06
1
3
2023-06-14
_citation.country
_citation.journal_abbrev
_citation.journal_id_ASTM
_citation.journal_id_CSD
_citation.journal_id_ISSN
_citation.journal_volume
_citation.page_first
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.pdbx_database_id_PubMed
_citation.title
_citation.year
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
BMRB
Y
PDBJ
2011-02-24
REL
REL
REL
REL
892
444
30
182
236
0.6
target function
200
20
0
6
0.38
1
3D HNCO
3D HNCA
3D HN(CO)CA
3D 1H-15N NOESY
3D 1H-13C NOESY
2D 1H-15N HSQC
2D 1H-13C HSQC aliphatic
2D 1H-13C HSQC aromatic
3D 15N,13C-filtered, 13C-edited NOESY
3D 15N,13C-filtered, 13C-edited NOESY
1
mM
[U-100% 13C; U-100% 15N]
1
mM
80
mM
[U-99% 2H]
1
mM
1
mM
[U-100% 13C; U-100% 15N]
1
mM
80
mM
[U-99% 2H]
1
mM
50
5.5
ambient
313
K
simulated annealing
1
fewest violations
1 mM [U-100% 13C; U-100% 15N] ErbB3tm-1, 1 mM ErbB3tm-2, 80 mM [U-99% 2H] DPC-3, 1 mM sodium azide-4, 90% H2O/10% D2O
90% H2O/10% D2O
1 mM [U-100% 13C; U-100% 15N] ErbB3tm-5, 1 mM ErbB3tm-6, 80 mM [U-99% 2H] DPC-7, 1 mM sodium azide-8, 100% D2O
100% D2O
Guntert, Mumenthaler and Wuthrich
refinement
CYANA
3.0
Keller and Wuthrich
chemical shift assignment
CARA
1.8.5
Keller and Wuthrich
data analysis
CARA
1.8.5
Keller and Wuthrich
peak picking
CARA
1.8.5
Bruker Biospin
processing
TopSpin
2.1
800
Bruker
AVANCE
Bruker Avance
600
Bruker
AVANCE
Bruker Avance
MET
637
n
1
MET
637
A
GLY
638
n
2
GLY
638
A
ARG
639
n
3
ARG
639
A
THR
640
n
4
THR
640
A
HIS
641
n
5
HIS
641
A
LEU
642
n
6
LEU
642
A
THR
643
n
7
THR
643
A
MET
644
n
8
MET
644
A
ALA
645
n
9
ALA
645
A
LEU
646
n
10
LEU
646
A
THR
647
n
11
THR
647
A
VAL
648
n
12
VAL
648
A
ILE
649
n
13
ILE
649
A
ALA
650
n
14
ALA
650
A
GLY
651
n
15
GLY
651
A
LEU
652
n
16
LEU
652
A
VAL
653
n
17
VAL
653
A
VAL
654
n
18
VAL
654
A
ILE
655
n
19
ILE
655
A
PHE
656
n
20
PHE
656
A
MET
657
n
21
MET
657
A
MET
658
n
22
MET
658
A
LEU
659
n
23
LEU
659
A
GLY
660
n
24
GLY
660
A
GLY
661
n
25
GLY
661
A
THR
662
n
26
THR
662
A
PHE
663
n
27
PHE
663
A
LEU
664
n
28
LEU
664
A
TYR
665
n
29
TYR
665
A
TRP
666
n
30
TRP
666
A
ARG
667
n
31
ARG
667
A
GLY
668
n
32
GLY
668
A
ARG
669
n
33
ARG
669
A
ARG
670
n
34
ARG
670
A
HIS
671
n
35
HIS
671
A
HIS
672
n
36
HIS
672
A
HIS
673
n
37
HIS
673
A
HIS
674
n
38
HIS
674
A
HIS
675
n
39
HIS
675
A
HIS
676
n
40
HIS
676
A
MET
637
n
1
MET
637
B
GLY
638
n
2
GLY
638
B
ARG
639
n
3
ARG
639
B
THR
640
n
4
THR
640
B
HIS
641
n
5
HIS
641
B
LEU
642
n
6
LEU
642
B
THR
643
n
7
THR
643
B
MET
644
n
8
MET
644
B
ALA
645
n
9
ALA
645
B
LEU
646
n
10
LEU
646
B
THR
647
n
11
THR
647
B
VAL
648
n
12
VAL
648
B
ILE
649
n
13
ILE
649
B
ALA
650
n
14
ALA
650
B
GLY
651
n
15
GLY
651
B
LEU
652
n
16
LEU
652
B
VAL
653
n
17
VAL
653
B
VAL
654
n
18
VAL
654
B
ILE
655
n
19
ILE
655
B
PHE
656
n
20
PHE
656
B
MET
657
n
21
MET
657
B
MET
658
n
22
MET
658
B
LEU
659
n
23
LEU
659
B
GLY
660
n
24
GLY
660
B
GLY
661
n
25
GLY
661
B
THR
662
n
26
THR
662
B
PHE
663
n
27
PHE
663
B
LEU
664
n
28
LEU
664
B
TYR
665
n
29
TYR
665
B
TRP
666
n
30
TRP
666
B
ARG
667
n
31
ARG
667
B
GLY
668
n
32
GLY
668
B
ARG
669
n
33
ARG
669
B
ARG
670
n
34
ARG
670
B
HIS
671
n
35
HIS
671
B
HIS
672
n
36
HIS
672
B
HIS
673
n
37
HIS
673
B
HIS
674
n
38
HIS
674
B
HIS
675
n
39
HIS
675
B
HIS
676
n
40
HIS
676
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
THR
640
-129.06
-50.93
1
B
ARG
670
-112.16
65.83
2
B
THR
640
-130.35
-50.92
2
B
HIS
673
-52.08
-74.66
2
B
HIS
674
51.99
-169.76
2
B
HIS
675
54.24
89.93
3
B
THR
640
-129.49
-50.91
3
B
ARG
669
-55.48
-70.53
3
B
ARG
670
-117.94
68.67
3
B
HIS
673
-149.04
-64.29
3
B
HIS
675
71.40
-70.02
4
B
THR
640
-135.52
-58.97
5
B
ARG
639
54.71
91.90
5
B
THR
640
-132.44
-50.12
5
B
HIS
672
-63.04
-175.36
5
B
HIS
674
57.21
82.01
6
B
ARG
639
54.75
91.99
6
B
THR
640
-141.27
-50.30
6
B
HIS
671
71.14
-68.92
6
B
HIS
675
52.53
82.59
7
B
HIS
674
-142.95
38.68
8
A
ARG
669
-55.28
-70.71
8
A
ARG
670
-119.87
69.33
8
B
THR
640
-126.76
-50.95
8
B
ARG
670
-94.96
35.57
8
B
HIS
675
-120.73
-68.38
9
B
THR
640
-128.04
-51.11
9
B
HIS
671
71.24
-68.78
9
B
HIS
672
56.80
91.95
10
B
ARG
639
54.72
91.94
10
B
THR
640
-138.60
-50.17
10
B
HIS
672
-103.95
79.16
10
B
HIS
674
-142.22
-74.09
11
B
ARG
639
54.79
91.86
11
B
THR
640
-131.27
-50.50
11
B
ARG
670
-118.67
69.37
11
B
HIS
672
-147.67
32.30
11
B
HIS
673
-135.85
-71.71
12
B
ARG
639
53.03
89.67
12
B
ARG
670
-118.95
69.24
12
B
HIS
672
-159.11
82.74
12
B
HIS
674
-163.37
64.88
13
A
HIS
673
-52.20
104.37
13
B
ARG
639
54.29
91.57
13
B
THR
640
-140.44
-49.08
13
B
HIS
674
-150.22
83.81
14
B
THR
640
-132.00
-51.12
14
B
HIS
673
-122.58
-58.88
14
B
HIS
674
62.15
170.76
15
B
ARG
639
54.82
91.86
15
B
THR
640
-130.19
-50.33
15
B
ARG
670
-81.36
-76.50
15
B
HIS
671
-141.00
17.43
16
B
THR
640
-134.88
-49.36
16
B
ARG
670
-119.91
69.03
16
B
HIS
673
-161.81
113.55
17
B
THR
640
-130.43
-50.46
17
B
HIS
671
179.98
34.64
17
B
HIS
673
-115.16
60.03
17
B
HIS
675
-158.41
-61.23
18
A
HIS
672
38.47
42.53
18
A
HIS
675
63.19
62.03
18
B
THR
640
-126.30
-51.38
18
B
HIS
671
71.22
-68.74
18
B
HIS
672
63.35
158.77
19
B
ARG
639
54.58
91.69
19
B
THR
640
-128.82
-53.09
19
B
ARG
670
-118.14
68.44
19
B
HIS
672
-55.49
171.85
19
B
HIS
673
62.16
169.92
20
B
THR
640
-130.57
-50.38
20
B
HIS
671
71.24
-68.97
fewest violations, model 1
Spatial structure of dimeric ErbB3 transmembrane domain
1
N
N
1
N
N
A
THR
640
A
THR
4
HELX_P
A
HIS
672
A
HIS
36
1
1
33
B
THR
640
B
THR
4
HELX_P
B
ARG
670
B
ARG
34
1
2
31
MEMBRANE PROTEIN
transmenbrane dimer, membrane protein, ErbB, EGFR
ERBB3_HUMAN
UNP
1
639
P21860
KTHLTMALTVIAGLVVIFMMLGGTFLYWRGRR
639
670
2L9U
639
670
P21860
A
1
3
34
639
670
2L9U
639
670
P21860
B
1
3
34
1
expression tag
MET
637
2L9U
A
P21860
UNP
1
1
expression tag
GLY
638
2L9U
A
P21860
UNP
2
1
LYS
engineered mutation
ARG
639
2L9U
A
P21860
UNP
639
3
1
expression tag
HIS
671
2L9U
A
P21860
UNP
35
1
expression tag
HIS
672
2L9U
A
P21860
UNP
36
1
expression tag
HIS
673
2L9U
A
P21860
UNP
37
1
expression tag
HIS
674
2L9U
A
P21860
UNP
38
1
expression tag
HIS
675
2L9U
A
P21860
UNP
39
1
expression tag
HIS
676
2L9U
A
P21860
UNP
40
2
expression tag
MET
637
2L9U
B
P21860
UNP
1
2
expression tag
GLY
638
2L9U
B
P21860
UNP
2
2
LYS
engineered mutation
ARG
639
2L9U
B
P21860
UNP
639
3
2
expression tag
HIS
671
2L9U
B
P21860
UNP
35
2
expression tag
HIS
672
2L9U
B
P21860
UNP
36
2
expression tag
HIS
673
2L9U
B
P21860
UNP
37
2
expression tag
HIS
674
2L9U
B
P21860
UNP
38
2
expression tag
HIS
675
2L9U
B
P21860
UNP
39
2
expression tag
HIS
676
2L9U
B
P21860
UNP
40