1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Lenarcic Zivkovic, M. Zareba-Koziol, M. Zhukova, L. Poznanski, J. Zhukov, I. Wyslouch-Cieszynska, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 287 40457 40470 10.1074/jbc.M112.418392 22989881 Post-translational S-Nitrosylation Is an Endogenous Factor Fine Tuning the Properties of Human S100A1 Protein. 2012 10.2210/pdb2llu/pdb pdb_00002llu 10425.588 Protein S100-A1 2 man polymer S-100 protein alpha chain, S-100 protein subunit alpha, S100 calcium-binding protein A1 no no GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA LTVACNNFFWENS GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA LTVACNNFFWENS A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample S100A1, S100A 9606 Homo sapiens 562 Escherichia coli pET-30a database_2 pdbx_database_status pdbx_nmr_software repository Initial release Database references Data collection Database references Other 1 0 2012-09-26 1 1 2012-12-12 1 2 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name BMRB Y RCSB 2011-11-17 REL REL REL REL structures with the lowest energy 200 20 2D 1H-15N HSQC 3D HNCO 3D HNCA 3D HN(CO)CA 3D HNCACB 3D CBCA(CO)NH 3D HBHA(CO)NH 3D 1H-15N NOESY 2D 1H-13C HSQC aliphatic 3D HCCH-TOCSY 3D 1H-13C NOESY aliphatic 3D 1H-13C NOESY aromatic 0.8 mM [U-98% 13C; U-98% 15N] 150 7.2 ambient 298 K simulated annealing 1 lowest energy 0.8 mM [U-98% 13C; U-98% 15N] protein, 90% H2O/10% D2O 90% H2O/10% D2O Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRPipe Goddard chemical shift assignment Sparky Goddard peak picking Sparky Guntert, Mumenthaler and Wuthrich structure solution CYANA 3.0 Schwieters, Kuszewski, Tjandra and Clore structure solution X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore refinement X-PLOR NIH Krieger, E., Koraimann, G., and Vriend, G. refinement YASARA 800 Varian Uniform NMR System Varian Uniform NMR System GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A GLU 3 n 3 GLU 3 A LEU 4 n 4 LEU 4 A GLU 5 n 5 GLU 5 A THR 6 n 6 THR 6 A ALA 7 n 7 ALA 7 A MET 8 n 8 MET 8 A GLU 9 n 9 GLU 9 A THR 10 n 10 THR 10 A LEU 11 n 11 LEU 11 A ILE 12 n 12 ILE 12 A ASN 13 n 13 ASN 13 A VAL 14 n 14 VAL 14 A PHE 15 n 15 PHE 15 A HIS 16 n 16 HIS 16 A ALA 17 n 17 ALA 17 A HIS 18 n 18 HIS 18 A SER 19 n 19 SER 19 A GLY 20 n 20 GLY 20 A LYS 21 n 21 LYS 21 A GLU 22 n 22 GLU 22 A GLY 23 n 23 GLY 23 A ASP 24 n 24 ASP 24 A LYS 25 n 25 LYS 25 A TYR 26 n 26 TYR 26 A LYS 27 n 27 LYS 27 A LEU 28 n 28 LEU 28 A SER 29 n 29 SER 29 A LYS 30 n 30 LYS 30 A LYS 31 n 31 LYS 31 A GLU 32 n 32 GLU 32 A LEU 33 n 33 LEU 33 A LYS 34 n 34 LYS 34 A GLU 35 n 35 GLU 35 A LEU 36 n 36 LEU 36 A LEU 37 n 37 LEU 37 A GLN 38 n 38 GLN 38 A THR 39 n 39 THR 39 A GLU 40 n 40 GLU 40 A LEU 41 n 41 LEU 41 A SER 42 n 42 SER 42 A GLY 43 n 43 GLY 43 A PHE 44 n 44 PHE 44 A LEU 45 n 45 LEU 45 A ASP 46 n 46 ASP 46 A ALA 47 n 47 ALA 47 A GLN 48 n 48 GLN 48 A LYS 49 n 49 LYS 49 A ASP 50 n 50 ASP 50 A VAL 51 n 51 VAL 51 A ASP 52 n 52 ASP 52 A ALA 53 n 53 ALA 53 A VAL 54 n 54 VAL 54 A ASP 55 n 55 ASP 55 A LYS 56 n 56 LYS 56 A VAL 57 n 57 VAL 57 A MET 58 n 58 MET 58 A LYS 59 n 59 LYS 59 A GLU 60 n 60 GLU 60 A LEU 61 n 61 LEU 61 A ASP 62 n 62 ASP 62 A GLU 63 n 63 GLU 63 A ASN 64 n 64 ASN 64 A GLY 65 n 65 GLY 65 A ASP 66 n 66 ASP 66 A GLY 67 n 67 GLY 67 A GLU 68 n 68 GLU 68 A VAL 69 n 69 VAL 69 A ASP 70 n 70 ASP 70 A PHE 71 n 71 PHE 71 A GLN 72 n 72 GLN 72 A GLU 73 n 73 GLU 73 A TYR 74 n 74 TYR 74 A VAL 75 n 75 VAL 75 A VAL 76 n 76 VAL 76 A LEU 77 n 77 LEU 77 A VAL 78 n 78 VAL 78 A ALA 79 n 79 ALA 79 A ALA 80 n 80 ALA 80 A LEU 81 n 81 LEU 81 A THR 82 n 82 THR 82 A VAL 83 n 83 VAL 83 A ALA 84 n 84 ALA 84 A CYS 85 n 85 CYS 85 A ASN 86 n 86 ASN 86 A ASN 87 n 87 ASN 87 A PHE 88 n 88 PHE 88 A PHE 89 n 89 PHE 89 A TRP 90 n 90 TRP 90 A GLU 91 n 91 GLU 91 A ASN 92 n 92 ASN 92 A SER 93 n 93 SER 93 A GLY 1 n 1 GLY 1 B SER 2 n 2 SER 2 B GLU 3 n 3 GLU 3 B LEU 4 n 4 LEU 4 B GLU 5 n 5 GLU 5 B THR 6 n 6 THR 6 B ALA 7 n 7 ALA 7 B MET 8 n 8 MET 8 B GLU 9 n 9 GLU 9 B THR 10 n 10 THR 10 B LEU 11 n 11 LEU 11 B ILE 12 n 12 ILE 12 B ASN 13 n 13 ASN 13 B VAL 14 n 14 VAL 14 B PHE 15 n 15 PHE 15 B HIS 16 n 16 HIS 16 B ALA 17 n 17 ALA 17 B HIS 18 n 18 HIS 18 B SER 19 n 19 SER 19 B GLY 20 n 20 GLY 20 B LYS 21 n 21 LYS 21 B GLU 22 n 22 GLU 22 B GLY 23 n 23 GLY 23 B ASP 24 n 24 ASP 24 B LYS 25 n 25 LYS 25 B TYR 26 n 26 TYR 26 B LYS 27 n 27 LYS 27 B LEU 28 n 28 LEU 28 B SER 29 n 29 SER 29 B LYS 30 n 30 LYS 30 B LYS 31 n 31 LYS 31 B GLU 32 n 32 GLU 32 B LEU 33 n 33 LEU 33 B LYS 34 n 34 LYS 34 B GLU 35 n 35 GLU 35 B LEU 36 n 36 LEU 36 B LEU 37 n 37 LEU 37 B GLN 38 n 38 GLN 38 B THR 39 n 39 THR 39 B GLU 40 n 40 GLU 40 B LEU 41 n 41 LEU 41 B SER 42 n 42 SER 42 B GLY 43 n 43 GLY 43 B PHE 44 n 44 PHE 44 B LEU 45 n 45 LEU 45 B ASP 46 n 46 ASP 46 B ALA 47 n 47 ALA 47 B GLN 48 n 48 GLN 48 B LYS 49 n 49 LYS 49 B ASP 50 n 50 ASP 50 B VAL 51 n 51 VAL 51 B ASP 52 n 52 ASP 52 B ALA 53 n 53 ALA 53 B VAL 54 n 54 VAL 54 B ASP 55 n 55 ASP 55 B LYS 56 n 56 LYS 56 B VAL 57 n 57 VAL 57 B MET 58 n 58 MET 58 B LYS 59 n 59 LYS 59 B GLU 60 n 60 GLU 60 B LEU 61 n 61 LEU 61 B ASP 62 n 62 ASP 62 B GLU 63 n 63 GLU 63 B ASN 64 n 64 ASN 64 B GLY 65 n 65 GLY 65 B ASP 66 n 66 ASP 66 B GLY 67 n 67 GLY 67 B GLU 68 n 68 GLU 68 B VAL 69 n 69 VAL 69 B ASP 70 n 70 ASP 70 B PHE 71 n 71 PHE 71 B GLN 72 n 72 GLN 72 B GLU 73 n 73 GLU 73 B TYR 74 n 74 TYR 74 B VAL 75 n 75 VAL 75 B VAL 76 n 76 VAL 76 B LEU 77 n 77 LEU 77 B VAL 78 n 78 VAL 78 B ALA 79 n 79 ALA 79 B ALA 80 n 80 ALA 80 B LEU 81 n 81 LEU 81 B THR 82 n 82 THR 82 B VAL 83 n 83 VAL 83 B ALA 84 n 84 ALA 84 B CYS 85 n 85 CYS 85 B ASN 86 n 86 ASN 86 B ASN 87 n 87 ASN 87 B PHE 88 n 88 PHE 88 B PHE 89 n 89 PHE 89 B TRP 90 n 90 TRP 90 B GLU 91 n 91 GLU 91 B ASN 92 n 92 ASN 92 B SER 93 n 93 SER 93 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 28 A N LEU 28 A O VAL 69 A O VAL 69 B N LEU 28 B N LEU 28 B O VAL 69 B O VAL 69 16 A ASN 87 10.72 1 A GLU 22 -106.73 41.64 1 A LEU 41 -90.43 -62.39 1 A PHE 88 -41.08 -17.29 3 B PHE 88 -40.76 -19.27 3 B TRP 90 -56.56 -8.08 4 A TRP 90 -56.53 -6.01 4 B GLU 22 -105.62 41.74 5 A SER 42 46.92 24.57 5 A PHE 88 -47.69 -15.99 5 A TRP 90 -56.54 -7.95 5 B PHE 88 -43.88 -15.50 6 A SER 42 45.78 26.75 6 B GLU 22 -99.27 41.76 6 B SER 42 46.73 26.08 6 B PHE 88 -49.40 -15.64 7 A SER 42 48.73 23.62 7 A TRP 90 -56.46 -5.51 7 A GLU 91 -55.67 105.51 7 B PHE 88 -40.90 -19.32 8 A PHE 88 -41.34 -18.32 8 A TRP 90 -53.92 -6.57 8 B PHE 88 -47.17 -15.64 9 A SER 42 46.09 29.81 10 A SER 42 42.29 26.30 10 B GLU 22 -109.67 41.71 10 B SER 42 34.91 35.85 10 B PHE 88 -47.23 -15.93 11 A SER 42 44.99 29.52 11 B SER 42 38.52 41.05 12 A SER 42 46.30 28.79 12 B PHE 88 -46.69 -15.58 13 A SER 42 47.54 25.06 13 A PHE 88 -42.33 -18.68 13 A TRP 90 -55.60 -2.81 13 B LEU 41 -91.84 -63.38 13 B SER 42 33.21 43.96 14 A GLU 22 -103.56 41.70 14 A PHE 88 -40.27 -16.40 14 A TRP 90 -56.12 -3.17 14 B SER 42 46.75 29.79 14 B PHE 88 -46.34 -15.86 15 A GLU 22 -106.33 41.86 15 B GLU 22 -98.94 41.91 15 B PHE 88 -47.19 -15.59 16 A PHE 88 -42.39 -17.04 16 B SER 42 46.77 27.82 16 B PHE 88 -40.79 -18.39 17 A GLU 22 -102.57 41.63 17 A SER 42 46.84 28.89 17 A TRP 90 -57.07 -9.54 18 B PHE 88 -46.16 -15.72 19 A SER 42 49.28 23.09 19 B LEU 41 -90.99 -61.19 20 A SER 42 48.04 23.00 20 A TRP 90 -58.56 -7.10 lowest energy, model 1 Post-translational S-nitrosylation is an endogenous factor fine-tuning human S100A1 protein properties 1 N N 1 N N A SER 2 A SER 2 HELX_P A SER 19 A SER 19 1 1 18 A LYS 30 A LYS 30 HELX_P A LEU 41 A LEU 41 1 2 12 A GLY 43 A GLY 43 HELX_P A GLN 48 A GLN 48 1 3 6 A ASP 50 A ASP 50 HELX_P A GLY 65 A GLY 65 1 4 16 A PHE 71 A PHE 71 HELX_P A ASN 87 A ASN 87 1 5 17 A PHE 88 A PHE 88 HELX_P A GLU 91 A GLU 91 5 6 4 B SER 2 B SER 2 HELX_P B SER 19 B SER 19 1 7 18 B LYS 30 B LYS 30 HELX_P B LEU 41 B LEU 41 1 8 12 B GLY 43 B GLY 43 HELX_P B ALA 47 B ALA 47 5 9 5 B ASP 50 B ASP 50 HELX_P B GLY 65 B GLY 65 1 10 16 B PHE 71 B PHE 71 HELX_P B ASN 86 B ASN 86 1 11 16 B ASN 87 B ASN 87 HELX_P B GLU 91 B GLU 91 5 12 5 METAL BINDING PROTEIN Ca-binding proteins, S-nitrosylation, METAL BINDING PROTEIN S10A1_HUMAN UNP 1 2 P23297 GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA LTVACNNFFWENS 2 94 2LLU 1 93 P23297 A 1 1 93 2 94 2LLU 1 93 P23297 B 1 1 93 2 2 anti-parallel anti-parallel A LYS 27 A LYS 27 A SER 29 A SER 29 A GLU 68 A GLU 68 A ASP 70 A ASP 70 B LYS 27 B LYS 27 B SER 29 B SER 29 B GLU 68 B GLU 68 B ASP 70 B ASP 70