1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Lenarcic Zivkovic, M.
Zareba-Koziol, M.
Zhukova, L.
Poznanski, J.
Zhukov, I.
Wyslouch-Cieszynska, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
287
40457
40470
10.1074/jbc.M112.418392
22989881
Post-translational S-Nitrosylation Is an Endogenous Factor Fine Tuning the Properties of Human S100A1 Protein.
2012
10.2210/pdb2llu/pdb
pdb_00002llu
10425.588
Protein S100-A1
2
man
polymer
S-100 protein alpha chain, S-100 protein subunit alpha, S100 calcium-binding protein A1
no
no
GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA
LTVACNNFFWENS
GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA
LTVACNNFFWENS
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
S100A1, S100A
9606
Homo sapiens
562
Escherichia coli
pET-30a
database_2
pdbx_database_status
pdbx_nmr_software
repository
Initial release
Database references
Data collection
Database references
Other
1
0
2012-09-26
1
1
2012-12-12
1
2
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
BMRB
Y
RCSB
2011-11-17
REL
REL
REL
REL
structures with the lowest energy
200
20
2D 1H-15N HSQC
3D HNCO
3D HNCA
3D HN(CO)CA
3D HNCACB
3D CBCA(CO)NH
3D HBHA(CO)NH
3D 1H-15N NOESY
2D 1H-13C HSQC aliphatic
3D HCCH-TOCSY
3D 1H-13C NOESY aliphatic
3D 1H-13C NOESY aromatic
0.8
mM
[U-98% 13C; U-98% 15N]
150
7.2
ambient
298
K
simulated annealing
1
lowest energy
0.8 mM [U-98% 13C; U-98% 15N] protein, 90% H2O/10% D2O
90% H2O/10% D2O
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
Goddard
chemical shift assignment
Sparky
Goddard
peak picking
Sparky
Guntert, Mumenthaler and Wuthrich
structure solution
CYANA
3.0
Schwieters, Kuszewski, Tjandra and Clore
structure solution
X-PLOR NIH
Schwieters, Kuszewski, Tjandra and Clore
refinement
X-PLOR NIH
Krieger, E., Koraimann, G., and Vriend, G.
refinement
YASARA
800
Varian
Uniform NMR System
Varian Uniform NMR System
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
GLU
3
n
3
GLU
3
A
LEU
4
n
4
LEU
4
A
GLU
5
n
5
GLU
5
A
THR
6
n
6
THR
6
A
ALA
7
n
7
ALA
7
A
MET
8
n
8
MET
8
A
GLU
9
n
9
GLU
9
A
THR
10
n
10
THR
10
A
LEU
11
n
11
LEU
11
A
ILE
12
n
12
ILE
12
A
ASN
13
n
13
ASN
13
A
VAL
14
n
14
VAL
14
A
PHE
15
n
15
PHE
15
A
HIS
16
n
16
HIS
16
A
ALA
17
n
17
ALA
17
A
HIS
18
n
18
HIS
18
A
SER
19
n
19
SER
19
A
GLY
20
n
20
GLY
20
A
LYS
21
n
21
LYS
21
A
GLU
22
n
22
GLU
22
A
GLY
23
n
23
GLY
23
A
ASP
24
n
24
ASP
24
A
LYS
25
n
25
LYS
25
A
TYR
26
n
26
TYR
26
A
LYS
27
n
27
LYS
27
A
LEU
28
n
28
LEU
28
A
SER
29
n
29
SER
29
A
LYS
30
n
30
LYS
30
A
LYS
31
n
31
LYS
31
A
GLU
32
n
32
GLU
32
A
LEU
33
n
33
LEU
33
A
LYS
34
n
34
LYS
34
A
GLU
35
n
35
GLU
35
A
LEU
36
n
36
LEU
36
A
LEU
37
n
37
LEU
37
A
GLN
38
n
38
GLN
38
A
THR
39
n
39
THR
39
A
GLU
40
n
40
GLU
40
A
LEU
41
n
41
LEU
41
A
SER
42
n
42
SER
42
A
GLY
43
n
43
GLY
43
A
PHE
44
n
44
PHE
44
A
LEU
45
n
45
LEU
45
A
ASP
46
n
46
ASP
46
A
ALA
47
n
47
ALA
47
A
GLN
48
n
48
GLN
48
A
LYS
49
n
49
LYS
49
A
ASP
50
n
50
ASP
50
A
VAL
51
n
51
VAL
51
A
ASP
52
n
52
ASP
52
A
ALA
53
n
53
ALA
53
A
VAL
54
n
54
VAL
54
A
ASP
55
n
55
ASP
55
A
LYS
56
n
56
LYS
56
A
VAL
57
n
57
VAL
57
A
MET
58
n
58
MET
58
A
LYS
59
n
59
LYS
59
A
GLU
60
n
60
GLU
60
A
LEU
61
n
61
LEU
61
A
ASP
62
n
62
ASP
62
A
GLU
63
n
63
GLU
63
A
ASN
64
n
64
ASN
64
A
GLY
65
n
65
GLY
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
GLU
68
n
68
GLU
68
A
VAL
69
n
69
VAL
69
A
ASP
70
n
70
ASP
70
A
PHE
71
n
71
PHE
71
A
GLN
72
n
72
GLN
72
A
GLU
73
n
73
GLU
73
A
TYR
74
n
74
TYR
74
A
VAL
75
n
75
VAL
75
A
VAL
76
n
76
VAL
76
A
LEU
77
n
77
LEU
77
A
VAL
78
n
78
VAL
78
A
ALA
79
n
79
ALA
79
A
ALA
80
n
80
ALA
80
A
LEU
81
n
81
LEU
81
A
THR
82
n
82
THR
82
A
VAL
83
n
83
VAL
83
A
ALA
84
n
84
ALA
84
A
CYS
85
n
85
CYS
85
A
ASN
86
n
86
ASN
86
A
ASN
87
n
87
ASN
87
A
PHE
88
n
88
PHE
88
A
PHE
89
n
89
PHE
89
A
TRP
90
n
90
TRP
90
A
GLU
91
n
91
GLU
91
A
ASN
92
n
92
ASN
92
A
SER
93
n
93
SER
93
A
GLY
1
n
1
GLY
1
B
SER
2
n
2
SER
2
B
GLU
3
n
3
GLU
3
B
LEU
4
n
4
LEU
4
B
GLU
5
n
5
GLU
5
B
THR
6
n
6
THR
6
B
ALA
7
n
7
ALA
7
B
MET
8
n
8
MET
8
B
GLU
9
n
9
GLU
9
B
THR
10
n
10
THR
10
B
LEU
11
n
11
LEU
11
B
ILE
12
n
12
ILE
12
B
ASN
13
n
13
ASN
13
B
VAL
14
n
14
VAL
14
B
PHE
15
n
15
PHE
15
B
HIS
16
n
16
HIS
16
B
ALA
17
n
17
ALA
17
B
HIS
18
n
18
HIS
18
B
SER
19
n
19
SER
19
B
GLY
20
n
20
GLY
20
B
LYS
21
n
21
LYS
21
B
GLU
22
n
22
GLU
22
B
GLY
23
n
23
GLY
23
B
ASP
24
n
24
ASP
24
B
LYS
25
n
25
LYS
25
B
TYR
26
n
26
TYR
26
B
LYS
27
n
27
LYS
27
B
LEU
28
n
28
LEU
28
B
SER
29
n
29
SER
29
B
LYS
30
n
30
LYS
30
B
LYS
31
n
31
LYS
31
B
GLU
32
n
32
GLU
32
B
LEU
33
n
33
LEU
33
B
LYS
34
n
34
LYS
34
B
GLU
35
n
35
GLU
35
B
LEU
36
n
36
LEU
36
B
LEU
37
n
37
LEU
37
B
GLN
38
n
38
GLN
38
B
THR
39
n
39
THR
39
B
GLU
40
n
40
GLU
40
B
LEU
41
n
41
LEU
41
B
SER
42
n
42
SER
42
B
GLY
43
n
43
GLY
43
B
PHE
44
n
44
PHE
44
B
LEU
45
n
45
LEU
45
B
ASP
46
n
46
ASP
46
B
ALA
47
n
47
ALA
47
B
GLN
48
n
48
GLN
48
B
LYS
49
n
49
LYS
49
B
ASP
50
n
50
ASP
50
B
VAL
51
n
51
VAL
51
B
ASP
52
n
52
ASP
52
B
ALA
53
n
53
ALA
53
B
VAL
54
n
54
VAL
54
B
ASP
55
n
55
ASP
55
B
LYS
56
n
56
LYS
56
B
VAL
57
n
57
VAL
57
B
MET
58
n
58
MET
58
B
LYS
59
n
59
LYS
59
B
GLU
60
n
60
GLU
60
B
LEU
61
n
61
LEU
61
B
ASP
62
n
62
ASP
62
B
GLU
63
n
63
GLU
63
B
ASN
64
n
64
ASN
64
B
GLY
65
n
65
GLY
65
B
ASP
66
n
66
ASP
66
B
GLY
67
n
67
GLY
67
B
GLU
68
n
68
GLU
68
B
VAL
69
n
69
VAL
69
B
ASP
70
n
70
ASP
70
B
PHE
71
n
71
PHE
71
B
GLN
72
n
72
GLN
72
B
GLU
73
n
73
GLU
73
B
TYR
74
n
74
TYR
74
B
VAL
75
n
75
VAL
75
B
VAL
76
n
76
VAL
76
B
LEU
77
n
77
LEU
77
B
VAL
78
n
78
VAL
78
B
ALA
79
n
79
ALA
79
B
ALA
80
n
80
ALA
80
B
LEU
81
n
81
LEU
81
B
THR
82
n
82
THR
82
B
VAL
83
n
83
VAL
83
B
ALA
84
n
84
ALA
84
B
CYS
85
n
85
CYS
85
B
ASN
86
n
86
ASN
86
B
ASN
87
n
87
ASN
87
B
PHE
88
n
88
PHE
88
B
PHE
89
n
89
PHE
89
B
TRP
90
n
90
TRP
90
B
GLU
91
n
91
GLU
91
B
ASN
92
n
92
ASN
92
B
SER
93
n
93
SER
93
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
28
A
N
LEU
28
A
O
VAL
69
A
O
VAL
69
B
N
LEU
28
B
N
LEU
28
B
O
VAL
69
B
O
VAL
69
16
A
ASN
87
10.72
1
A
GLU
22
-106.73
41.64
1
A
LEU
41
-90.43
-62.39
1
A
PHE
88
-41.08
-17.29
3
B
PHE
88
-40.76
-19.27
3
B
TRP
90
-56.56
-8.08
4
A
TRP
90
-56.53
-6.01
4
B
GLU
22
-105.62
41.74
5
A
SER
42
46.92
24.57
5
A
PHE
88
-47.69
-15.99
5
A
TRP
90
-56.54
-7.95
5
B
PHE
88
-43.88
-15.50
6
A
SER
42
45.78
26.75
6
B
GLU
22
-99.27
41.76
6
B
SER
42
46.73
26.08
6
B
PHE
88
-49.40
-15.64
7
A
SER
42
48.73
23.62
7
A
TRP
90
-56.46
-5.51
7
A
GLU
91
-55.67
105.51
7
B
PHE
88
-40.90
-19.32
8
A
PHE
88
-41.34
-18.32
8
A
TRP
90
-53.92
-6.57
8
B
PHE
88
-47.17
-15.64
9
A
SER
42
46.09
29.81
10
A
SER
42
42.29
26.30
10
B
GLU
22
-109.67
41.71
10
B
SER
42
34.91
35.85
10
B
PHE
88
-47.23
-15.93
11
A
SER
42
44.99
29.52
11
B
SER
42
38.52
41.05
12
A
SER
42
46.30
28.79
12
B
PHE
88
-46.69
-15.58
13
A
SER
42
47.54
25.06
13
A
PHE
88
-42.33
-18.68
13
A
TRP
90
-55.60
-2.81
13
B
LEU
41
-91.84
-63.38
13
B
SER
42
33.21
43.96
14
A
GLU
22
-103.56
41.70
14
A
PHE
88
-40.27
-16.40
14
A
TRP
90
-56.12
-3.17
14
B
SER
42
46.75
29.79
14
B
PHE
88
-46.34
-15.86
15
A
GLU
22
-106.33
41.86
15
B
GLU
22
-98.94
41.91
15
B
PHE
88
-47.19
-15.59
16
A
PHE
88
-42.39
-17.04
16
B
SER
42
46.77
27.82
16
B
PHE
88
-40.79
-18.39
17
A
GLU
22
-102.57
41.63
17
A
SER
42
46.84
28.89
17
A
TRP
90
-57.07
-9.54
18
B
PHE
88
-46.16
-15.72
19
A
SER
42
49.28
23.09
19
B
LEU
41
-90.99
-61.19
20
A
SER
42
48.04
23.00
20
A
TRP
90
-58.56
-7.10
lowest energy, model 1
Post-translational S-nitrosylation is an endogenous factor fine-tuning human S100A1 protein properties
1
N
N
1
N
N
A
SER
2
A
SER
2
HELX_P
A
SER
19
A
SER
19
1
1
18
A
LYS
30
A
LYS
30
HELX_P
A
LEU
41
A
LEU
41
1
2
12
A
GLY
43
A
GLY
43
HELX_P
A
GLN
48
A
GLN
48
1
3
6
A
ASP
50
A
ASP
50
HELX_P
A
GLY
65
A
GLY
65
1
4
16
A
PHE
71
A
PHE
71
HELX_P
A
ASN
87
A
ASN
87
1
5
17
A
PHE
88
A
PHE
88
HELX_P
A
GLU
91
A
GLU
91
5
6
4
B
SER
2
B
SER
2
HELX_P
B
SER
19
B
SER
19
1
7
18
B
LYS
30
B
LYS
30
HELX_P
B
LEU
41
B
LEU
41
1
8
12
B
GLY
43
B
GLY
43
HELX_P
B
ALA
47
B
ALA
47
5
9
5
B
ASP
50
B
ASP
50
HELX_P
B
GLY
65
B
GLY
65
1
10
16
B
PHE
71
B
PHE
71
HELX_P
B
ASN
86
B
ASN
86
1
11
16
B
ASN
87
B
ASN
87
HELX_P
B
GLU
91
B
GLU
91
5
12
5
METAL BINDING PROTEIN
Ca-binding proteins, S-nitrosylation, METAL BINDING PROTEIN
S10A1_HUMAN
UNP
1
2
P23297
GSELETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA
LTVACNNFFWENS
2
94
2LLU
1
93
P23297
A
1
1
93
2
94
2LLU
1
93
P23297
B
1
1
93
2
2
anti-parallel
anti-parallel
A
LYS
27
A
LYS
27
A
SER
29
A
SER
29
A
GLU
68
A
GLU
68
A
ASP
70
A
ASP
70
B
LYS
27
B
LYS
27
B
SER
29
B
SER
29
B
GLU
68
B
GLU
68
B
ASP
70
B
ASP
70