1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Chen, C.
Kao, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
JP
J.Biochem.
0021-924X
152
443
451
10.1093/jb/mvs086
22888115
Solution structure of the C-terminal NP-repeat domain of Tic40, a co-chaperone during protein import into chloroplasts.
2012
10.2210/pdb2lnm/pdb
pdb_00002lnm
7056.141
Protein TIC 40, chloroplastic
UNP RESIDUES 386-447
1
man
polymer
Protein PIGMENT DEFECTIVE EMBRYO 120, Translocon at the inner envelope membrane of chloroplasts 40, AtTIC40
no
no
PEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPGMTG
PEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPGMTG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
mouse-ear cress,thale-cress
sample
NdeI, XhoI
TIC40, PDE120, At5g16620, MTG13.6
3702
Arabidopsis thaliana
562
Escherichia coli
BL21(DE3)
pET15b
vector
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
repository
Initial release
Data collection
Database references
Other
1
0
2012-11-14
1
1
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
BMRB
Y
PDBJ
2012-01-01
REL
REL
REL
REL
839
158
85
309
257
lowest energy
100
20
1
2D 1H-15N HSQC
2D 1H-13C HSQC
3D CBCA(CO)NH
3D HNCACB
3D HNCO
3D HN(CA)CO
3D HNCA
3D HN(CO)CA
3D HCCH-TOCSY
3D CCCONH
3D 1H-15N NOESY
3D 1H-15N TOCSY
3D 1H-13C NOESY
2D 1H-1H NOESY
20
mM
20
mM
100
mM
10
%
[U-99% 2H]
140
5.56
ambient
310
K
simulated annealing
1
lowest energy
20 mM potassium phosphate-1, 20 mM sodium citrate-2, 100 mM sodium chloride-3, 10 % [U-99% 2H] TFE-4, 90% H2O/10% D2O
90% H2O/10% D2O
Schwieters, Kuszewski, Tjandra and Clore
structure solution
X-PLOR NIH
2.18
Johnson, One Moon Scientific
chemical shift assignment
NMRView
5
Johnson, One Moon Scientific
peak picking
NMRView
5
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
Cornilescu, Delaglio and Bax
data analysis
TALOS
refinement
X-PLOR NIH
600
Bruker
AVANCE
Bruker Avance
PRO
1
n
1
PRO
1
A
GLU
2
n
2
GLU
2
A
GLU
3
n
3
GLU
3
A
VAL
4
n
4
VAL
4
A
ILE
5
n
5
ILE
5
A
SER
6
n
6
SER
6
A
LYS
7
n
7
LYS
7
A
ILE
8
n
8
ILE
8
A
MET
9
n
9
MET
9
A
GLU
10
n
10
GLU
10
A
ASN
11
n
11
ASN
11
A
PRO
12
n
12
PRO
12
A
ASP
13
n
13
ASP
13
A
VAL
14
n
14
VAL
14
A
ALA
15
n
15
ALA
15
A
MET
16
n
16
MET
16
A
ALA
17
n
17
ALA
17
A
PHE
18
n
18
PHE
18
A
GLN
19
n
19
GLN
19
A
ASN
20
n
20
ASN
20
A
PRO
21
n
21
PRO
21
A
ARG
22
n
22
ARG
22
A
VAL
23
n
23
VAL
23
A
GLN
24
n
24
GLN
24
A
ALA
25
n
25
ALA
25
A
ALA
26
n
26
ALA
26
A
LEU
27
n
27
LEU
27
A
MET
28
n
28
MET
28
A
GLU
29
n
29
GLU
29
A
CYS
30
n
30
CYS
30
A
SER
31
n
31
SER
31
A
GLU
32
n
32
GLU
32
A
ASN
33
n
33
ASN
33
A
PRO
34
n
34
PRO
34
A
MET
35
n
35
MET
35
A
ASN
36
n
36
ASN
36
A
ILE
37
n
37
ILE
37
A
MET
38
n
38
MET
38
A
LYS
39
n
39
LYS
39
A
TYR
40
n
40
TYR
40
A
GLN
41
n
41
GLN
41
A
ASN
42
n
42
ASN
42
A
ASP
43
n
43
ASP
43
A
LYS
44
n
44
LYS
44
A
GLU
45
n
45
GLU
45
A
VAL
46
n
46
VAL
46
A
MET
47
n
47
MET
47
A
ASP
48
n
48
ASP
48
A
VAL
49
n
49
VAL
49
A
PHE
50
n
50
PHE
50
A
ASN
51
n
51
ASN
51
A
LYS
52
n
52
LYS
52
A
ILE
53
n
53
ILE
53
A
SER
54
n
54
SER
54
A
GLN
55
n
55
GLN
55
A
LEU
56
n
56
LEU
56
A
PHE
57
n
57
PHE
57
A
PRO
58
n
58
PRO
58
A
GLY
59
n
59
GLY
59
A
MET
60
n
60
MET
60
A
THR
61
n
61
THR
61
A
GLY
62
n
62
GLY
62
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
H
HD22
ASN
ASN
33
36
1.23
10
A
A
O
H
LYS
GLU
7
10
1.57
19
A
A
H
HD22
ASN
ASN
33
36
1.26
1
A
MET
9
-59.30
-6.98
1
A
PRO
12
-45.20
-15.29
1
A
ASN
33
170.80
151.33
1
A
PRO
34
-45.83
-7.91
1
A
MET
38
-59.51
-9.21
1
A
MET
60
53.29
98.03
2
A
PRO
12
-45.76
-15.42
2
A
ASN
33
171.11
161.22
2
A
PRO
34
-45.94
-10.07
2
A
MET
60
-168.61
-61.61
3
A
MET
9
-57.22
-7.04
3
A
PRO
12
-45.82
-13.06
3
A
ASN
33
170.96
152.21
3
A
PRO
34
-47.64
-8.22
3
A
PHE
57
-154.24
88.42
3
A
PRO
58
-92.74
52.67
3
A
MET
60
-134.98
-83.24
4
A
PRO
12
-45.94
-12.53
4
A
ASN
33
174.13
157.86
4
A
PRO
34
-45.54
-9.74
4
A
MET
38
-72.11
24.76
4
A
LYS
39
-146.46
-38.43
4
A
MET
60
52.75
96.54
5
A
MET
9
-58.06
-7.16
5
A
PRO
12
-44.53
-15.42
5
A
ASN
33
175.57
164.08
5
A
PRO
34
-45.69
-9.94
5
A
MET
38
-65.23
21.40
5
A
LYS
39
-154.25
-34.10
5
A
PRO
58
-63.69
10.30
5
A
THR
61
52.44
76.13
6
A
MET
9
-57.43
-6.80
6
A
PRO
12
-45.99
-13.44
6
A
ASN
33
172.01
156.41
6
A
PRO
34
-45.85
-9.40
6
A
PRO
58
-63.08
-78.00
6
A
MET
60
53.85
96.93
6
A
THR
61
-65.14
-160.28
7
A
MET
9
-57.14
-7.30
7
A
PRO
12
-46.19
-12.91
7
A
ASN
33
174.89
157.58
7
A
PRO
34
-48.63
-8.54
7
A
PRO
58
-42.14
90.25
7
A
MET
60
-175.60
114.80
8
A
MET
9
-58.53
-6.95
8
A
ASN
11
-160.34
90.70
8
A
PRO
12
-45.37
-14.22
8
A
ASN
33
173.75
158.04
8
A
PRO
34
-45.66
-9.54
8
A
MET
60
50.80
94.34
8
A
THR
61
-62.18
94.32
9
A
PRO
12
-44.66
-17.77
9
A
ASN
33
173.12
161.91
9
A
PRO
34
-46.40
-9.80
9
A
MET
38
-51.13
-9.92
9
A
PRO
58
-51.31
-9.76
9
A
MET
60
-174.03
85.20
9
A
THR
61
-69.27
69.73
10
A
PRO
12
-46.22
-11.15
10
A
ASN
33
174.18
161.80
10
A
PRO
34
-45.91
-10.04
10
A
MET
60
52.67
77.17
11
A
ASN
11
-160.24
92.06
11
A
PRO
12
-46.63
-12.34
11
A
ASN
33
171.72
161.71
11
A
PRO
34
-45.89
-10.00
11
A
MET
38
-69.00
5.25
11
A
PRO
58
-42.27
102.45
11
A
MET
60
50.70
-167.75
12
A
MET
9
-56.94
-7.22
12
A
PRO
12
-45.99
-12.93
12
A
ASN
33
173.77
157.71
12
A
PRO
34
-45.56
-9.53
12
A
MET
38
-67.23
20.05
12
A
LYS
39
-145.57
-39.48
12
A
PRO
58
-66.29
10.72
12
A
MET
60
-67.04
96.21
12
A
THR
61
-164.50
-72.37
13
A
GLU
10
-54.78
-9.90
13
A
PRO
12
-44.93
-16.68
13
A
ASN
33
174.73
157.52
13
A
PRO
34
-49.02
-8.34
13
A
PHE
57
-161.95
89.49
13
A
PRO
58
-48.62
94.01
13
A
THR
61
-59.13
-84.30
14
A
MET
9
-58.64
-6.73
14
A
PRO
12
-45.26
-14.59
14
A
ASN
33
175.20
161.65
14
A
PRO
34
-52.99
-8.22
14
A
MET
60
52.71
-154.08
14
A
THR
61
-164.69
86.84
15
A
MET
9
-58.07
-6.84
15
A
PRO
12
-44.81
-15.09
15
A
ASN
33
175.42
158.03
15
A
PRO
34
-48.44
-8.73
15
A
MET
38
-68.73
26.15
15
A
LYS
39
-151.51
-36.91
15
A
ASP
43
-68.17
93.97
15
A
MET
60
52.61
93.84
15
A
THR
61
-59.12
94.38
16
A
MET
9
-57.09
-7.11
16
A
PRO
12
-45.62
-13.38
16
A
ASN
33
172.26
162.87
16
A
PRO
34
-46.14
-9.72
16
A
MET
38
-55.33
-5.89
16
A
PRO
58
-68.24
20.46
17
A
ASN
33
174.90
161.93
17
A
PRO
34
-52.04
-7.97
17
A
MET
60
52.54
95.89
18
A
MET
9
-55.80
-7.11
18
A
PRO
12
-46.48
-13.34
18
A
ASN
33
173.89
161.67
18
A
PRO
34
-50.08
-8.69
18
A
MET
38
-67.94
25.29
18
A
LYS
39
-152.00
-37.55
18
A
ASP
43
-67.30
95.00
18
A
PRO
58
-67.29
19.92
18
A
MET
60
-65.30
90.97
18
A
THR
61
-69.25
-75.48
19
A
PRO
12
-46.58
-11.14
19
A
ASN
33
174.39
154.30
19
A
PRO
34
-52.43
-6.02
19
A
PRO
58
-71.56
26.32
19
A
THR
61
-59.33
-177.46
20
A
MET
9
-57.05
-6.85
20
A
PRO
12
-46.23
-14.11
20
A
ASN
33
173.88
157.81
20
A
PRO
34
-45.48
-9.63
20
A
MET
38
-60.50
1.41
20
A
PRO
58
-67.07
26.10
20
A
MET
60
52.97
96.82
N
lowest energy, model 1
Solution structure of the C-terminal NP-repeat domain of Tic40, a co-chaperone during protein import into chloroplasts
1
N
N
A
PRO
1
A
PRO
1
HELX_P
A
MET
9
A
MET
9
1
1
9
A
ASN
11
A
ASN
11
HELX_P
A
PHE
18
A
PHE
18
1
2
8
A
ASN
20
A
ASN
20
HELX_P
A
SER
31
A
SER
31
1
3
12
A
GLU
32
A
GLU
32
HELX_P
A
MET
35
A
MET
35
5
4
4
A
ASN
36
A
ASN
36
HELX_P
A
GLN
41
A
GLN
41
1
5
6
A
ASP
43
A
ASP
43
HELX_P
A
PHE
57
A
PHE
57
1
6
15
PROTEIN TRANSPORT
translocon, import, chloroplast, Tic40-NP, PROTEIN TRANSPORT
TIC40_ARATH
UNP
1
386
Q9FMD5
PEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPGMTG
386
447
2LNM
1
62
Q9FMD5
A
1
1
62