1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Chen, C. Kao, Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking JP J.Biochem. 0021-924X 152 443 451 10.1093/jb/mvs086 22888115 Solution structure of the C-terminal NP-repeat domain of Tic40, a co-chaperone during protein import into chloroplasts. 2012 10.2210/pdb2lnm/pdb pdb_00002lnm 7056.141 Protein TIC 40, chloroplastic UNP RESIDUES 386-447 1 man polymer Protein PIGMENT DEFECTIVE EMBRYO 120, Translocon at the inner envelope membrane of chloroplasts 40, AtTIC40 no no PEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPGMTG PEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPGMTG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n mouse-ear cress,thale-cress sample NdeI, XhoI TIC40, PDE120, At5g16620, MTG13.6 3702 Arabidopsis thaliana 562 Escherichia coli BL21(DE3) pET15b vector database_2 pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer repository Initial release Data collection Database references Other 1 0 2012-11-14 1 1 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model BMRB Y PDBJ 2012-01-01 REL REL REL REL 839 158 85 309 257 lowest energy 100 20 1 2D 1H-15N HSQC 2D 1H-13C HSQC 3D CBCA(CO)NH 3D HNCACB 3D HNCO 3D HN(CA)CO 3D HNCA 3D HN(CO)CA 3D HCCH-TOCSY 3D CCCONH 3D 1H-15N NOESY 3D 1H-15N TOCSY 3D 1H-13C NOESY 2D 1H-1H NOESY 20 mM 20 mM 100 mM 10 % [U-99% 2H] 140 5.56 ambient 310 K simulated annealing 1 lowest energy 20 mM potassium phosphate-1, 20 mM sodium citrate-2, 100 mM sodium chloride-3, 10 % [U-99% 2H] TFE-4, 90% H2O/10% D2O 90% H2O/10% D2O Schwieters, Kuszewski, Tjandra and Clore structure solution X-PLOR NIH 2.18 Johnson, One Moon Scientific chemical shift assignment NMRView 5 Johnson, One Moon Scientific peak picking NMRView 5 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRPipe Cornilescu, Delaglio and Bax data analysis TALOS refinement X-PLOR NIH 600 Bruker AVANCE Bruker Avance PRO 1 n 1 PRO 1 A GLU 2 n 2 GLU 2 A GLU 3 n 3 GLU 3 A VAL 4 n 4 VAL 4 A ILE 5 n 5 ILE 5 A SER 6 n 6 SER 6 A LYS 7 n 7 LYS 7 A ILE 8 n 8 ILE 8 A MET 9 n 9 MET 9 A GLU 10 n 10 GLU 10 A ASN 11 n 11 ASN 11 A PRO 12 n 12 PRO 12 A ASP 13 n 13 ASP 13 A VAL 14 n 14 VAL 14 A ALA 15 n 15 ALA 15 A MET 16 n 16 MET 16 A ALA 17 n 17 ALA 17 A PHE 18 n 18 PHE 18 A GLN 19 n 19 GLN 19 A ASN 20 n 20 ASN 20 A PRO 21 n 21 PRO 21 A ARG 22 n 22 ARG 22 A VAL 23 n 23 VAL 23 A GLN 24 n 24 GLN 24 A ALA 25 n 25 ALA 25 A ALA 26 n 26 ALA 26 A LEU 27 n 27 LEU 27 A MET 28 n 28 MET 28 A GLU 29 n 29 GLU 29 A CYS 30 n 30 CYS 30 A SER 31 n 31 SER 31 A GLU 32 n 32 GLU 32 A ASN 33 n 33 ASN 33 A PRO 34 n 34 PRO 34 A MET 35 n 35 MET 35 A ASN 36 n 36 ASN 36 A ILE 37 n 37 ILE 37 A MET 38 n 38 MET 38 A LYS 39 n 39 LYS 39 A TYR 40 n 40 TYR 40 A GLN 41 n 41 GLN 41 A ASN 42 n 42 ASN 42 A ASP 43 n 43 ASP 43 A LYS 44 n 44 LYS 44 A GLU 45 n 45 GLU 45 A VAL 46 n 46 VAL 46 A MET 47 n 47 MET 47 A ASP 48 n 48 ASP 48 A VAL 49 n 49 VAL 49 A PHE 50 n 50 PHE 50 A ASN 51 n 51 ASN 51 A LYS 52 n 52 LYS 52 A ILE 53 n 53 ILE 53 A SER 54 n 54 SER 54 A GLN 55 n 55 GLN 55 A LEU 56 n 56 LEU 56 A PHE 57 n 57 PHE 57 A PRO 58 n 58 PRO 58 A GLY 59 n 59 GLY 59 A MET 60 n 60 MET 60 A THR 61 n 61 THR 61 A GLY 62 n 62 GLY 62 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A H HD22 ASN ASN 33 36 1.23 10 A A O H LYS GLU 7 10 1.57 19 A A H HD22 ASN ASN 33 36 1.26 1 A MET 9 -59.30 -6.98 1 A PRO 12 -45.20 -15.29 1 A ASN 33 170.80 151.33 1 A PRO 34 -45.83 -7.91 1 A MET 38 -59.51 -9.21 1 A MET 60 53.29 98.03 2 A PRO 12 -45.76 -15.42 2 A ASN 33 171.11 161.22 2 A PRO 34 -45.94 -10.07 2 A MET 60 -168.61 -61.61 3 A MET 9 -57.22 -7.04 3 A PRO 12 -45.82 -13.06 3 A ASN 33 170.96 152.21 3 A PRO 34 -47.64 -8.22 3 A PHE 57 -154.24 88.42 3 A PRO 58 -92.74 52.67 3 A MET 60 -134.98 -83.24 4 A PRO 12 -45.94 -12.53 4 A ASN 33 174.13 157.86 4 A PRO 34 -45.54 -9.74 4 A MET 38 -72.11 24.76 4 A LYS 39 -146.46 -38.43 4 A MET 60 52.75 96.54 5 A MET 9 -58.06 -7.16 5 A PRO 12 -44.53 -15.42 5 A ASN 33 175.57 164.08 5 A PRO 34 -45.69 -9.94 5 A MET 38 -65.23 21.40 5 A LYS 39 -154.25 -34.10 5 A PRO 58 -63.69 10.30 5 A THR 61 52.44 76.13 6 A MET 9 -57.43 -6.80 6 A PRO 12 -45.99 -13.44 6 A ASN 33 172.01 156.41 6 A PRO 34 -45.85 -9.40 6 A PRO 58 -63.08 -78.00 6 A MET 60 53.85 96.93 6 A THR 61 -65.14 -160.28 7 A MET 9 -57.14 -7.30 7 A PRO 12 -46.19 -12.91 7 A ASN 33 174.89 157.58 7 A PRO 34 -48.63 -8.54 7 A PRO 58 -42.14 90.25 7 A MET 60 -175.60 114.80 8 A MET 9 -58.53 -6.95 8 A ASN 11 -160.34 90.70 8 A PRO 12 -45.37 -14.22 8 A ASN 33 173.75 158.04 8 A PRO 34 -45.66 -9.54 8 A MET 60 50.80 94.34 8 A THR 61 -62.18 94.32 9 A PRO 12 -44.66 -17.77 9 A ASN 33 173.12 161.91 9 A PRO 34 -46.40 -9.80 9 A MET 38 -51.13 -9.92 9 A PRO 58 -51.31 -9.76 9 A MET 60 -174.03 85.20 9 A THR 61 -69.27 69.73 10 A PRO 12 -46.22 -11.15 10 A ASN 33 174.18 161.80 10 A PRO 34 -45.91 -10.04 10 A MET 60 52.67 77.17 11 A ASN 11 -160.24 92.06 11 A PRO 12 -46.63 -12.34 11 A ASN 33 171.72 161.71 11 A PRO 34 -45.89 -10.00 11 A MET 38 -69.00 5.25 11 A PRO 58 -42.27 102.45 11 A MET 60 50.70 -167.75 12 A MET 9 -56.94 -7.22 12 A PRO 12 -45.99 -12.93 12 A ASN 33 173.77 157.71 12 A PRO 34 -45.56 -9.53 12 A MET 38 -67.23 20.05 12 A LYS 39 -145.57 -39.48 12 A PRO 58 -66.29 10.72 12 A MET 60 -67.04 96.21 12 A THR 61 -164.50 -72.37 13 A GLU 10 -54.78 -9.90 13 A PRO 12 -44.93 -16.68 13 A ASN 33 174.73 157.52 13 A PRO 34 -49.02 -8.34 13 A PHE 57 -161.95 89.49 13 A PRO 58 -48.62 94.01 13 A THR 61 -59.13 -84.30 14 A MET 9 -58.64 -6.73 14 A PRO 12 -45.26 -14.59 14 A ASN 33 175.20 161.65 14 A PRO 34 -52.99 -8.22 14 A MET 60 52.71 -154.08 14 A THR 61 -164.69 86.84 15 A MET 9 -58.07 -6.84 15 A PRO 12 -44.81 -15.09 15 A ASN 33 175.42 158.03 15 A PRO 34 -48.44 -8.73 15 A MET 38 -68.73 26.15 15 A LYS 39 -151.51 -36.91 15 A ASP 43 -68.17 93.97 15 A MET 60 52.61 93.84 15 A THR 61 -59.12 94.38 16 A MET 9 -57.09 -7.11 16 A PRO 12 -45.62 -13.38 16 A ASN 33 172.26 162.87 16 A PRO 34 -46.14 -9.72 16 A MET 38 -55.33 -5.89 16 A PRO 58 -68.24 20.46 17 A ASN 33 174.90 161.93 17 A PRO 34 -52.04 -7.97 17 A MET 60 52.54 95.89 18 A MET 9 -55.80 -7.11 18 A PRO 12 -46.48 -13.34 18 A ASN 33 173.89 161.67 18 A PRO 34 -50.08 -8.69 18 A MET 38 -67.94 25.29 18 A LYS 39 -152.00 -37.55 18 A ASP 43 -67.30 95.00 18 A PRO 58 -67.29 19.92 18 A MET 60 -65.30 90.97 18 A THR 61 -69.25 -75.48 19 A PRO 12 -46.58 -11.14 19 A ASN 33 174.39 154.30 19 A PRO 34 -52.43 -6.02 19 A PRO 58 -71.56 26.32 19 A THR 61 -59.33 -177.46 20 A MET 9 -57.05 -6.85 20 A PRO 12 -46.23 -14.11 20 A ASN 33 173.88 157.81 20 A PRO 34 -45.48 -9.63 20 A MET 38 -60.50 1.41 20 A PRO 58 -67.07 26.10 20 A MET 60 52.97 96.82 N lowest energy, model 1 Solution structure of the C-terminal NP-repeat domain of Tic40, a co-chaperone during protein import into chloroplasts 1 N N A PRO 1 A PRO 1 HELX_P A MET 9 A MET 9 1 1 9 A ASN 11 A ASN 11 HELX_P A PHE 18 A PHE 18 1 2 8 A ASN 20 A ASN 20 HELX_P A SER 31 A SER 31 1 3 12 A GLU 32 A GLU 32 HELX_P A MET 35 A MET 35 5 4 4 A ASN 36 A ASN 36 HELX_P A GLN 41 A GLN 41 1 5 6 A ASP 43 A ASP 43 HELX_P A PHE 57 A PHE 57 1 6 15 PROTEIN TRANSPORT translocon, import, chloroplast, Tic40-NP, PROTEIN TRANSPORT TIC40_ARATH UNP 1 386 Q9FMD5 PEEVISKIMENPDVAMAFQNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPGMTG 386 447 2LNM 1 62 Q9FMD5 A 1 1 62