1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Ramelot, T.A.
Rossi, P.
Yang, Y.
Lee, H.
Ertekin, A.
Wang, H.
Ciccosanti, C.
Kohan, E.
Maglaqui, M.
Janjua, H.
Nair, R.
Rost, B.
Acton, T.B.
Xiao, R.
Everett, J.K.
Prestegard, J.H.
Montelione, G.T.
Kennedy, M.A.
Northeast Structural Genomics Consortium (NESG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
51
7239
7249
10.1021/bi300546b
22876860
Structure of a specialized acyl carrier protein essential for lipid A biosynthesis with very long-chain fatty acids in open and closed conformations.
2012
10.2210/pdb2lpk/pdb
pdb_00002lpk
11309.719
Specialized acyl carrier protein
1
man
polymer
no
no
MTSTFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNL
AARIDELVAAKGALEHHHHHH
MTSTFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNL
AARIDELVAAKGALEHHHHHH
A
RpR324
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
ATCC BAA-98 / CGA009
sample
RPA2022
258594
Rhodopseudomonas palustris
469008
Escherichia coli
BL21(DE3)pMgK
pET21_NESG
Northeast Structural Genomics Consortium
NESG
PSI:Biology
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
struct_ref_seq_dif
repository
Initial release
Database references
Data collection
Database references
Other
1
0
2012-02-29
1
1
2012-12-05
1
2
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
Y
BMRB
Y
RCSB
2012-02-14
REL
REL
REL
REL
target function
100
20
2D 1H-15N HSQC
2D 1H-13C HSQC aliphatic
2D 1H-13C HSQC aromatic
2D 1H-15N HSQC
3D 1H-15N NOESY
3D 1H-13C NOESY_aliph
3D 1H-13C NOESY_arom
2D 1H-15N hetNOE
2D 1H-15N T1
2D 1H-15N T2
1D 15N T1
1D 15N T2
1.0
mM
[U-100% 13C; U-100% 15N]
20
mM
200
mM
5
mM
0.02
%
10
mM
5
uM
1.0
mM
[U-100% 13C; U-100% 15N]
20
mM
200
mM
5
mM
0.02
%
10
mM
5
uM
6.5
ambient
298
K
CNS water refinement + RDCs
simulated annealing
1
lowest energy
1.0 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 0.02 % sodium azide, 10 mM DTT, 5 uM DSS, 90% H2O/10% D2O
90% H2O/10% D2O
1.0 mM [U-100% 13C; U-100% 15N] protein, 20 mM MES, 200 mM sodium chloride, 5 mM calcium chloride, 0.02 % sodium azide, 10 mM DTT, 5 uM DSS, 100% D2O
100% D2O
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
2008
Varian
collection
VNMR
6.1C
Bruker Biospin
collection
TopSpin
2.1.4
Brunger, Adams, Clore, Gros, Nilges and Read
refinement
CNS
1.3
Goddard
data analysis
Sparky
3.113
Bhattacharya and Montelione
refinement
PSVS
1.4
(PdbStat)-Roberto Tejero and Gaetano T. Montelione
structure solution
PdbStat
5.4
Guntert, Mumenthaler and Wuthrich
structure solution
CYANA__3.0
3.0
Alex Lemak, University of Toronto
refinement
FMCGUI
Zweckstetter
refinement
PALES
pales_linux
600
Varian
INOVA
Varian INOVA
850
Bruker
AVANCE III
Bruker AvanceIII
600
Bruker
AVANCE III
Bruker AvanceIII
MET
1
n
1
MET
1
A
THR
2
n
2
THR
2
A
SER
3
n
3
SER
3
A
THR
4
n
4
THR
4
A
PHE
5
n
5
PHE
5
A
ASP
6
n
6
ASP
6
A
ARG
7
n
7
ARG
7
A
VAL
8
n
8
VAL
8
A
ALA
9
n
9
ALA
9
A
THR
10
n
10
THR
10
A
ILE
11
n
11
ILE
11
A
ILE
12
n
12
ILE
12
A
ALA
13
n
13
ALA
13
A
GLU
14
n
14
GLU
14
A
THR
15
n
15
THR
15
A
CYS
16
n
16
CYS
16
A
ASP
17
n
17
ASP
17
A
ILE
18
n
18
ILE
18
A
PRO
19
n
19
PRO
19
A
ARG
20
n
20
ARG
20
A
GLU
21
n
21
GLU
21
A
THR
22
n
22
THR
22
A
ILE
23
n
23
ILE
23
A
THR
24
n
24
THR
24
A
PRO
25
n
25
PRO
25
A
GLU
26
n
26
GLU
26
A
SER
27
n
27
SER
27
A
HIS
28
n
28
HIS
28
A
ALA
29
n
29
ALA
29
A
ILE
30
n
30
ILE
30
A
ASP
31
n
31
ASP
31
A
ASP
32
n
32
ASP
32
A
LEU
33
n
33
LEU
33
A
GLY
34
n
34
GLY
34
A
ILE
35
n
35
ILE
35
A
ASP
36
n
36
ASP
36
A
SER
37
n
37
SER
37
A
LEU
38
n
38
LEU
38
A
ASP
39
n
39
ASP
39
A
PHE
40
n
40
PHE
40
A
LEU
41
n
41
LEU
41
A
ASP
42
n
42
ASP
42
A
ILE
43
n
43
ILE
43
A
ALA
44
n
44
ALA
44
A
PHE
45
n
45
PHE
45
A
ALA
46
n
46
ALA
46
A
ILE
47
n
47
ILE
47
A
ASP
48
n
48
ASP
48
A
LYS
49
n
49
LYS
49
A
ALA
50
n
50
ALA
50
A
PHE
51
n
51
PHE
51
A
GLY
52
n
52
GLY
52
A
ILE
53
n
53
ILE
53
A
LYS
54
n
54
LYS
54
A
LEU
55
n
55
LEU
55
A
PRO
56
n
56
PRO
56
A
LEU
57
n
57
LEU
57
A
GLU
58
n
58
GLU
58
A
LYS
59
n
59
LYS
59
A
TRP
60
n
60
TRP
60
A
THR
61
n
61
THR
61
A
GLN
62
n
62
GLN
62
A
GLU
63
n
63
GLU
63
A
VAL
64
n
64
VAL
64
A
ASN
65
n
65
ASN
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
LYS
68
n
68
LYS
68
A
ALA
69
n
69
ALA
69
A
THR
70
n
70
THR
70
A
THR
71
n
71
THR
71
A
GLU
72
n
72
GLU
72
A
GLN
73
n
73
GLN
73
A
TYR
74
n
74
TYR
74
A
PHE
75
n
75
PHE
75
A
VAL
76
n
76
VAL
76
A
LEU
77
n
77
LEU
77
A
LYS
78
n
78
LYS
78
A
ASN
79
n
79
ASN
79
A
LEU
80
n
80
LEU
80
A
ALA
81
n
81
ALA
81
A
ALA
82
n
82
ALA
82
A
ARG
83
n
83
ARG
83
A
ILE
84
n
84
ILE
84
A
ASP
85
n
85
ASP
85
A
GLU
86
n
86
GLU
86
A
LEU
87
n
87
LEU
87
A
VAL
88
n
88
VAL
88
A
ALA
89
n
89
ALA
89
A
ALA
90
n
90
ALA
90
A
LYS
91
n
91
LYS
91
A
GLY
92
n
92
GLY
92
A
ALA
93
n
93
ALA
93
A
LEU
94
n
94
LEU
94
A
GLU
95
n
95
GLU
95
A
HIS
96
n
96
HIS
96
A
HIS
97
n
97
HIS
97
A
HIS
98
n
98
HIS
98
A
HIS
99
n
99
HIS
99
A
HIS
100
n
100
HIS
100
A
HIS
101
n
101
HIS
101
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ILE
30
-93.22
-60.11
1
A
ALA
93
71.23
-55.65
2
A
THR
71
-58.42
93.10
2
A
GLU
72
175.86
-63.81
2
A
HIS
97
66.48
93.25
2
A
HIS
99
77.72
-64.85
3
A
THR
2
-63.60
87.25
3
A
ASP
17
48.25
70.60
3
A
HIS
96
68.68
-70.31
4
A
THR
2
48.87
27.98
4
A
ASP
32
-98.39
-65.59
4
A
ALA
93
-104.04
-63.92
4
A
HIS
98
-171.74
141.02
4
A
HIS
100
-167.74
104.95
5
A
THR
2
-63.74
96.03
5
A
ASP
17
50.54
75.00
5
A
ASP
32
-96.91
-64.25
5
A
ALA
93
-148.60
-42.03
5
A
LEU
94
-92.09
-71.68
6
A
GLU
95
-84.75
-89.14
6
A
HIS
96
64.85
-78.32
6
A
HIS
97
-153.15
43.29
6
A
HIS
98
-63.11
-77.28
6
A
HIS
99
-163.87
113.16
7
A
HIS
97
84.34
-35.63
7
A
HIS
98
72.44
-62.02
7
A
HIS
99
-54.79
103.99
8
A
ALA
93
-84.34
-76.95
8
A
LEU
94
-173.31
123.36
8
A
GLU
95
-121.25
-60.02
8
A
HIS
96
-145.89
46.46
8
A
HIS
97
75.73
-43.87
9
A
THR
2
61.77
84.21
9
A
ASP
17
45.67
77.85
9
A
ASP
32
-99.24
-65.20
9
A
HIS
99
-163.89
104.48
9
A
HIS
100
-154.91
86.76
10
A
LEU
94
60.79
-84.08
10
A
GLU
95
175.69
-53.28
10
A
HIS
96
73.57
155.70
11
A
ASP
32
-108.25
-61.01
11
A
ALA
93
57.75
-165.74
12
A
ALA
93
67.33
117.41
12
A
LEU
94
-61.21
97.94
12
A
HIS
97
-83.87
-138.13
12
A
HIS
98
76.69
-89.90
12
A
HIS
99
60.66
-0.57
13
A
ASP
32
-95.70
-60.04
13
A
PRO
56
-68.71
58.77
13
A
THR
71
-62.63
77.39
13
A
GLU
72
-178.97
-61.78
13
A
HIS
96
-161.69
-33.14
13
A
HIS
99
63.29
-175.76
13
A
HIS
100
72.95
-65.30
14
A
GLU
95
-92.04
-158.08
15
A
LEU
94
-67.90
84.44
15
A
HIS
99
-171.63
142.11
15
A
HIS
100
-169.91
-24.75
16
A
THR
2
-140.81
-58.63
16
A
ASP
17
48.10
76.76
16
A
LEU
94
-74.86
-169.54
16
A
HIS
99
-56.15
92.78
16
A
HIS
100
176.06
-33.51
17
A
ASP
17
39.52
74.49
17
A
ASP
32
-96.84
-64.53
17
A
ALA
93
63.30
-82.76
17
A
LEU
94
-156.31
89.57
17
A
GLU
95
-124.69
-94.03
17
A
HIS
97
69.67
-75.82
17
A
HIS
98
72.54
-61.00
17
A
HIS
99
-130.81
-66.34
17
A
HIS
100
-167.89
104.20
18
A
HIS
96
-97.27
-79.79
18
A
HIS
97
-147.26
-52.95
18
A
HIS
98
-155.80
-57.90
18
A
HIS
99
-164.78
-52.59
18
A
HIS
100
71.75
-15.66
19
A
PRO
56
-79.18
44.16
19
A
ALA
93
63.02
-175.47
19
A
HIS
97
-155.91
-58.18
19
A
HIS
98
-173.40
121.78
19
A
HIS
100
-160.78
-57.63
20
A
ASP
17
56.78
70.18
20
A
LEU
94
-76.31
-76.22
20
A
GLU
95
-162.07
-26.71
20
A
HIS
97
-121.56
-86.82
20
A
HIS
100
67.76
-87.60
N
lowest energy, model 1
Solution NMR of the specialized apo-acyl carrier protein (RPA2022) from Rhodopseudomonas palustris, Northeast Structural Genomics Consortium Target RpR324
1
N
N
A
SER
3
A
SER
3
HELX_P
A
ASP
17
A
ASP
17
1
1
15
A
PRO
19
A
PRO
19
HELX_P
A
ILE
23
A
ILE
23
5
2
5
A
ASP
36
A
ASP
36
HELX_P
A
PHE
51
A
PHE
51
1
3
16
A
PRO
56
A
PRO
56
HELX_P
A
ASP
66
A
ASP
66
1
4
11
A
THR
71
A
THR
71
HELX_P
A
VAL
76
A
VAL
76
1
5
6
A
VAL
76
A
VAL
76
HELX_P
A
ALA
93
A
ALA
93
1
6
18
TRANSFERASE
apo, PSI-Biology, AcpXL, RpAcpXL, Structural Genomics, Northeast Structural Genomics Consortium, Protein Structure Initiative, TRANSFERASE, NESG
Q6N882_RHOPA
UNP
1
1
Q6N882
MTSTFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNL
AARIDELVAAKGA
1
93
2LPK
1
93
Q6N882
A
1
1
93
1
expression tag
LEU
94
2LPK
A
Q6N882
UNP
94
1
expression tag
GLU
95
2LPK
A
Q6N882
UNP
95
1
expression tag
HIS
96
2LPK
A
Q6N882
UNP
96
1
expression tag
HIS
97
2LPK
A
Q6N882
UNP
97
1
expression tag
HIS
98
2LPK
A
Q6N882
UNP
98
1
expression tag
HIS
99
2LPK
A
Q6N882
UNP
99
1
expression tag
HIS
100
2LPK
A
Q6N882
UNP
100
1
expression tag
HIS
101
2LPK
A
Q6N882
UNP
101