1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Xi, Z.
Shi, C.
Lai, C.
Tian, C.
Liu, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Solution structure of the K60A mutant of Atox1
10.2210/pdb2lq9/pdb
pdb_00002lq9
7354.545
Copper transport protein ATOX1
K60A
1
man
polymer
Metal transport protein ATX1
no
no
MPKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGATVSYLGLE
MPKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGATVSYLGLE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
ATOX1, HAH1
9606
Homo sapiens
562
Escherichia coli
pST-SG1
vector
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
struct_ref_seq_dif
repository
Initial release
Data collection
Database references
Other
1
0
2013-03-27
1
1
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
BMRB
Y
PDBJ
2012-02-28
REL
REL
REL
REL
structures with the lowest energy
200
20
1
2D 1H-15N HSQC
2D 1H-13C HSQC
3D CBCA(CO)NH
3D C(CO)NH
3D HNCO
3D HNCACB
3D HBHA(CO)NH
3D H(CCO)NH
3D 1H-15N NOESY
3D 1H-13C NOESY
3D HCCH-COSY
0.4-0.5
mM
[U-100% 13C; U-100% 15N]
100
mM
2-2.5
mM
0.4-0.5
mM
[U-100% 15N]
100
mM
2-2.5
mM
0.4-0.5
mM
[U-100% 13C; U-100% 15N]
100
mM
2-2.5
mM
0.215
7
ambient
298
K
simulated annealing
1
lowest energy
0.4-0.5 mM [U-100% 13C; U-100% 15N] entity-1, 100 mM sodium phosphate-2, 2-2.5 mM DTT-3, 90% H2O/10% D2O
90% H2O/10% D2O
0.4-0.5 mM [U-100% 15N] entity-4, 100 mM sodium phosphate-5, 2-2.5 mM DTT-6, 90% H2O/10% D2O
90% H2O/10% D2O
0.4-0.5 mM [U-100% 13C; U-100% 15N] entity-7, 100 mM sodium phosphate-8, 2-2.5 mM DTT-9, 100% D2O
100% D2O
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
Johnson, One Moon Scientific
peak picking
NMRView
Johnson, One Moon Scientific
chemical shift assignment
NMRView
Goddard
peak picking
Sparky
Goddard
chemical shift assignment
Sparky
Schwieters, Kuszewski, Tjandra and Clore
structure solution
X-PLOR NIH
Schwieters, Kuszewski, Tjandra and Clore
refinement
X-PLOR NIH
500
Bruker
AVANCE
Bruker Avance
600
Bruker
AVANCE
Bruker Avance
MET
1
n
1
MET
1
A
PRO
2
n
2
PRO
2
A
LYS
3
n
3
LYS
3
A
HIS
4
n
4
HIS
4
A
GLU
5
n
5
GLU
5
A
PHE
6
n
6
PHE
6
A
SER
7
n
7
SER
7
A
VAL
8
n
8
VAL
8
A
ASP
9
n
9
ASP
9
A
MET
10
n
10
MET
10
A
THR
11
n
11
THR
11
A
CYS
12
n
12
CYS
12
A
GLY
13
n
13
GLY
13
A
GLY
14
n
14
GLY
14
A
CYS
15
n
15
CYS
15
A
ALA
16
n
16
ALA
16
A
GLU
17
n
17
GLU
17
A
ALA
18
n
18
ALA
18
A
VAL
19
n
19
VAL
19
A
SER
20
n
20
SER
20
A
ARG
21
n
21
ARG
21
A
VAL
22
n
22
VAL
22
A
LEU
23
n
23
LEU
23
A
ASN
24
n
24
ASN
24
A
LYS
25
n
25
LYS
25
A
LEU
26
n
26
LEU
26
A
GLY
27
n
27
GLY
27
A
GLY
28
n
28
GLY
28
A
VAL
29
n
29
VAL
29
A
LYS
30
n
30
LYS
30
A
TYR
31
n
31
TYR
31
A
ASP
32
n
32
ASP
32
A
ILE
33
n
33
ILE
33
A
ASP
34
n
34
ASP
34
A
LEU
35
n
35
LEU
35
A
PRO
36
n
36
PRO
36
A
ASN
37
n
37
ASN
37
A
LYS
38
n
38
LYS
38
A
LYS
39
n
39
LYS
39
A
VAL
40
n
40
VAL
40
A
CYS
41
n
41
CYS
41
A
ILE
42
n
42
ILE
42
A
GLU
43
n
43
GLU
43
A
SER
44
n
44
SER
44
A
GLU
45
n
45
GLU
45
A
HIS
46
n
46
HIS
46
A
SER
47
n
47
SER
47
A
MET
48
n
48
MET
48
A
ASP
49
n
49
ASP
49
A
THR
50
n
50
THR
50
A
LEU
51
n
51
LEU
51
A
LEU
52
n
52
LEU
52
A
ALA
53
n
53
ALA
53
A
THR
54
n
54
THR
54
A
LEU
55
n
55
LEU
55
A
LYS
56
n
56
LYS
56
A
LYS
57
n
57
LYS
57
A
THR
58
n
58
THR
58
A
GLY
59
n
59
GLY
59
A
ALA
60
n
60
ALA
60
A
THR
61
n
61
THR
61
A
VAL
62
n
62
VAL
62
A
SER
63
n
63
SER
63
A
TYR
64
n
64
TYR
64
A
LEU
65
n
65
LEU
65
A
GLY
66
n
66
GLY
66
A
LEU
67
n
67
LEU
67
A
GLU
68
n
68
GLU
68
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
30
A
N
LYS
30
A
O
GLU
43
A
O
GLU
43
A
O
ILE
42
A
O
ILE
42
A
N
HIS
4
A
N
HIS
4
A
N
SER
7
A
N
SER
7
A
O
SER
63
A
O
SER
63
1
A
A
O
H
CYS
ALA
12
16
1.48
1
A
A
O
H
LEU
GLY
23
27
1.52
2
A
A
O
H
CYS
ALA
12
16
1.50
3
A
A
O
H
CYS
ALA
12
16
1.51
3
A
A
O
H
LEU
GLY
23
27
1.54
3
A
A
O
H
LYS
GLY
56
59
1.60
4
A
A
O
H
CYS
ALA
12
16
1.53
4
A
A
O
H
LEU
GLY
23
27
1.55
5
A
A
O
H
LEU
GLY
23
27
1.55
5
A
A
O
H
CYS
ALA
12
16
1.57
5
A
A
O
H
LEU
LEU
51
55
1.60
6
A
A
O
H
CYS
ALA
12
16
1.50
6
A
A
O
H
LEU
LEU
51
55
1.58
7
A
A
O
H
CYS
ALA
12
16
1.54
8
A
A
O
H
CYS
ALA
12
16
1.51
8
A
A
O
H
LEU
GLY
23
27
1.59
9
A
A
O
H
CYS
ALA
12
16
1.50
9
A
A
O
H
LEU
GLY
23
27
1.55
10
A
A
O
H
CYS
ALA
12
16
1.53
10
A
A
O
H
LEU
GLY
23
27
1.55
11
A
A
O
H
CYS
ALA
12
16
1.49
12
A
A
HD1
HG
HIS
SER
4
47
1.29
12
A
A
O
H
CYS
ALA
12
16
1.49
12
A
A
O
H
LEU
GLY
23
27
1.52
13
A
A
O
H
CYS
ALA
12
16
1.48
13
A
A
O
H
LEU
GLY
23
27
1.57
14
A
A
O
H
CYS
ALA
12
16
1.50
14
A
A
O
H
LEU
GLY
23
27
1.57
14
A
A
O
H
LEU
LYS
52
56
1.59
15
A
A
O
H
CYS
ALA
12
16
1.50
15
A
A
O
H
LEU
GLY
23
27
1.53
15
A
A
O
H
LEU
LEU
51
55
1.59
16
A
A
O
H
CYS
ALA
12
16
1.51
16
A
A
O
H
LEU
GLY
23
27
1.52
17
A
A
O
H
CYS
ALA
12
16
1.50
17
A
A
O
H
LEU
GLY
23
27
1.55
17
A
A
O
HG1
THR
THR
50
54
1.59
18
A
A
O
H
CYS
ALA
12
16
1.51
18
A
A
O
H
LEU
GLY
23
27
1.53
18
A
A
O
H
LYS
GLY
56
59
1.58
19
A
A
O
H
CYS
ALA
12
16
1.48
20
A
A
O
H
CYS
ALA
12
16
1.51
1
A
CYS
12
-107.04
40.95
1
A
SER
47
59.58
137.63
1
A
MET
48
70.40
54.96
1
A
ASP
49
-179.04
-40.48
2
A
HIS
46
-94.54
-65.51
2
A
MET
48
154.15
48.87
2
A
ASP
49
-172.05
-39.64
3
A
SER
47
63.89
160.42
3
A
MET
48
71.80
34.74
3
A
ASP
49
-163.12
-40.63
4
A
HIS
46
-86.71
-73.11
4
A
SER
47
89.69
105.52
4
A
MET
48
67.31
60.69
4
A
ASP
49
-173.16
-34.95
5
A
SER
47
70.44
116.64
5
A
MET
48
84.82
65.62
5
A
ASP
49
171.56
-40.17
6
A
CYS
12
-97.98
31.55
6
A
SER
47
61.06
124.96
6
A
MET
48
87.78
44.31
6
A
ASP
49
-173.45
-38.03
7
A
CYS
12
-99.31
30.70
7
A
SER
47
60.32
119.40
7
A
MET
48
91.25
63.18
7
A
ASP
49
170.62
-42.76
8
A
HIS
46
-76.37
-93.97
8
A
SER
47
86.24
107.58
8
A
MET
48
98.35
52.91
8
A
ASP
49
174.07
-37.51
9
A
SER
47
70.94
153.58
9
A
ASP
49
-160.25
-37.12
10
A
VAL
29
-127.56
-168.38
10
A
MET
48
160.76
61.90
10
A
ASP
49
169.23
-30.38
11
A
MET
48
-178.95
47.66
11
A
ASP
49
171.05
-29.51
11
A
LYS
57
-29.17
-49.84
12
A
CYS
12
-96.41
35.70
12
A
SER
47
58.73
115.87
12
A
MET
48
86.85
61.28
12
A
ASP
49
173.87
-42.02
13
A
CYS
12
-96.43
35.75
13
A
SER
47
48.04
166.60
13
A
MET
48
71.13
60.30
13
A
ASP
49
161.30
-40.29
14
A
SER
47
61.81
127.45
14
A
MET
48
87.23
61.64
14
A
ASP
49
169.85
-42.05
15
A
SER
47
55.70
123.30
15
A
MET
48
88.54
69.14
15
A
ASP
49
163.50
-38.00
16
A
SER
47
57.82
-179.93
16
A
ASP
49
-158.10
-37.66
17
A
MET
48
-166.76
50.88
17
A
ASP
49
174.17
-33.57
18
A
SER
47
59.04
133.94
18
A
MET
48
77.04
50.20
18
A
ASP
49
-171.77
-41.46
19
A
HIS
46
-101.11
-71.51
19
A
SER
47
61.43
153.00
19
A
MET
48
71.75
37.13
19
A
ASP
49
-170.40
-41.35
20
A
HIS
46
-74.65
-72.36
20
A
SER
47
75.14
104.24
20
A
MET
48
80.98
57.90
20
A
ASP
49
-174.94
-41.34
lowest energy, model 1
Solution structure of the K60A mutant of Atox1
1
N
N
A
CYS
12
A
CYS
12
HELX_P
A
GLY
27
A
GLY
27
1
1
16
A
ASP
49
A
ASP
49
HELX_P
A
THR
58
A
THR
58
1
2
10
METAL BINDING PROTEIN
K60A Atox1, METAL BINDING PROTEIN
ATOX1_HUMAN
UNP
1
1
O00244
MPKHEFSVDMTCGGCAEAVSRVLNKLGGVKYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE
1
68
2LQ9
1
68
O00244
A
1
1
68
1
LYS
engineered mutation
ALA
60
2LQ9
A
O00244
UNP
60
60
4
anti-parallel
anti-parallel
anti-parallel
A
LYS
30
A
LYS
30
A
ASP
34
A
ASP
34
A
LYS
39
A
LYS
39
A
GLU
43
A
GLU
43
A
HIS
4
A
HIS
4
A
VAL
8
A
VAL
8
A
VAL
62
A
VAL
62
A
LEU
67
A
LEU
67