1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Rettig, M. Germann, M.W. Wilson, W. Wang, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C18 H26 N10 O3 430.464 NETROPSIN non-polymer GE Chembiochem 1439-4227 14 323 331 10.1002/cbic.201200706 23355266 Molecular basis for sequence-dependent induced DNA bending. 2013 3044.017 DNA (5'-D(*GP*GP*AP*TP*AP*TP*AP*TP*CP*C)-3') 2 syn polymer 430.464 NETROPSIN 1 syn non-polymer no no (DG)(DG)(DA)(DT)(DA)(DT)(DA)(DT)(DC)(DC) GGATATATCC 1,2 polydeoxyribonucleotide n n n n n n n n n n 5.780 1 19 1 1 2 20 -1.466 1_DG1:DC20_2 1 -18.184 0.032 0.111 -0.045 7.724 1 19 1 2 2 19 -1.454 1_DG2:DC19_2 2 -19.494 -0.141 0.032 -0.076 -5.498 1 20 1 3 2 18 -5.110 1_DA3:DT18_2 3 -14.581 0.192 -0.037 0.045 5.801 1 20 1 4 2 17 -1.213 1_DT4:DA17_2 4 -11.445 -0.365 -0.030 0.089 1.768 1 20 1 5 2 16 -6.286 1_DA5:DT16_2 5 -19.334 0.292 0.229 0.046 -0.017 1 20 1 6 2 15 0.338 1_DT6:DA15_2 6 -15.195 -0.304 0.112 -0.015 -1.329 1 20 1 7 2 14 -2.772 1_DA7:DT14_2 7 -13.147 0.520 0.059 0.073 3.846 1 20 1 8 2 13 0.296 1_DT8:DA13_2 8 -17.907 -0.045 0.117 -0.044 -7.682 1 19 1 9 2 12 -0.826 1_DC9:DG12_2 9 -12.799 0.548 -0.027 -0.203 5.346 1 19 1 10 2 11 -0.483 1_DC10:DG11_2 10 -2.292 0.183 0.185 -0.122 2.970 34.485 1 1 1 2 16.347 2 2 20 19 3.173 9.566 -0.059 -0.310 11_DG1DG2:DC19DC20_22 1 -1.911 3.266 33.116 -1.947 -0.184 3.376 41.682 1 1 2 3 -0.273 2 2 19 18 3.375 -0.194 0.071 -0.170 11_DG2DA3:DT18DC19_22 2 -0.053 0.074 41.682 -0.218 -0.106 2.835 26.549 1 1 3 4 2.945 2 2 18 17 2.849 1.352 0.222 -0.283 11_DA3DT4:DA17DT18_22 3 0.481 -1.047 26.511 -0.927 -0.373 3.204 42.334 1 1 4 5 -8.966 2 2 17 16 3.296 -6.448 -0.425 0.526 11_DT4DA5:DT16DA17_22 4 -2.615 3.636 41.784 1.387 0.321 3.261 35.397 1 1 5 6 -14.127 2 2 16 15 3.166 -8.505 0.331 -0.720 11_DA5DT6:DA15DT16_22 5 2.244 -3.728 34.321 0.065 -0.214 3.258 41.924 1 1 6 7 -4.321 2 2 15 14 3.292 -3.089 -0.015 0.350 11_DT6DA7:DT14DA15_22 6 1.128 -1.578 41.801 0.811 0.139 3.152 28.668 1 1 7 8 -9.417 2 2 14 13 3.074 -4.643 0.061 -0.744 11_DA7DT8:DA13DT14_22 7 -0.341 0.692 28.295 -0.499 -0.196 3.369 42.272 1 1 8 9 4.592 2 2 13 12 3.394 3.308 -0.005 -0.187 11_DT8DC9:DG12DA13_22 8 1.072 -1.488 42.135 -0.610 0.121 2.929 32.185 1 1 9 10 14.611 2 2 12 11 3.125 8.013 0.366 -0.304 11_DC9DC10:DG11DG12_22 9 -2.074 3.781 31.129 -1.895 -1.008 atom_site pdbx_unobs_or_zero_occ_atoms repository Initial release Database references Advisory Atomic model 1 0 2013-01-23 1 1 2013-02-20 2 0 2017-07-26 The free DNA without netropsin. BMRB Y RCSB 2012-07-31 REL REL REL NT NETROPSIN target function 9500 11 2D 1H-1H NOESY 2D 1H-1H NOESY 2D DQF-COSY 2D 1H-1H NOESY 2D 1H-13C HSQC aliphatic 2D 1H-13C HSQC aromatic 0.9 mM 0.9 mM 0.9 mM 0.9 mM 0.6 mM 9 mg/mL 0.6 mM 7 ambient 278 K simulated annealing, molecular dynamics 1 minimized average structure 0.9 mM DNA (5'-D(*GP*GP*AP*TP*AP*TP*AP*TP*CP*C)-3'), 0.9 mM NETROPSIN, 100% D2O 100% D2O 0.9 mM DNA (5'-D(*GP*GP*AP*TP*AP*TP*AP*TP*CP*C)-3'), 0.9 mM NETROPSIN, 90% H2O/10% D2O 90% H2O/10% D2O 0.6 mM DNA (5'-D(*GP*GP*AP*TP*AP*TP*AP*TP*CP*C)-3'), 9 mg/mL Pf1 phage, 0.6 mM NETROPSIN, 100% D2O 100% D2O Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman structure solution AMBER 9 Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, and Kollman refinement AMBER 9 600 Bruker Avance Bruker Avance 500 Bruker Avance Bruker Avance NT 21 2 NT NT 101 1 DG 1 n 1 DG 1 1 DG 2 n 2 DG 2 1 DA 3 n 3 DA 3 1 DT 4 n 4 DT 4 1 DA 5 n 5 DA 5 1 DT 6 n 6 DT 6 1 DA 7 n 7 DA 7 1 DT 8 n 8 DT 8 1 DC 9 n 9 DC 9 1 DC 10 n 10 DC 10 1 DG 11 n 1 DG 11 2 DG 12 n 2 DG 12 2 DA 13 n 3 DA 13 2 DT 14 n 4 DT 14 2 DA 15 n 5 DA 15 2 DT 16 n 6 DT 16 2 DA 17 n 7 DA 17 2 DT 18 n 8 DT 18 2 DC 19 n 9 DC 19 2 DC 20 n 10 DC 20 2 author_and_software_defined_assembly PISA 2 dimeric 418.7 -6.8 2391 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 1 DA 3 0.068 SIDE CHAIN 1 1 DT 6 0.070 SIDE CHAIN 1 1 DT 8 0.060 SIDE CHAIN 1 2 DT 16 0.073 SIDE CHAIN 1 2 DA 17 0.087 SIDE CHAIN 2 1 DA 5 0.057 SIDE CHAIN 2 1 DT 8 0.078 SIDE CHAIN 2 2 DG 11 0.054 SIDE CHAIN 2 2 DT 16 0.074 SIDE CHAIN 2 2 DA 17 0.062 SIDE CHAIN 3 1 DG 1 0.075 SIDE CHAIN 3 1 DA 3 0.074 SIDE CHAIN 3 1 DT 6 0.083 SIDE CHAIN 3 1 DT 8 0.072 SIDE CHAIN 3 2 DA 13 0.063 SIDE CHAIN 3 2 DT 14 0.077 SIDE CHAIN 3 2 DA 17 0.079 SIDE CHAIN 4 1 DT 6 0.077 SIDE CHAIN 4 1 DT 8 0.079 SIDE CHAIN 4 2 DG 12 0.057 SIDE CHAIN 5 1 DG 1 0.067 SIDE CHAIN 5 1 DA 3 0.059 SIDE CHAIN 5 1 DT 6 0.088 SIDE CHAIN 5 2 DA 13 0.068 SIDE CHAIN 5 2 DT 14 0.088 SIDE CHAIN 5 2 DA 17 0.077 SIDE CHAIN 6 1 DA 5 0.072 SIDE CHAIN 6 1 DT 6 0.109 SIDE CHAIN 6 1 DT 8 0.074 SIDE CHAIN 6 2 DG 12 0.070 SIDE CHAIN 6 2 DA 13 0.062 SIDE CHAIN 7 1 DA 5 0.080 SIDE CHAIN 7 1 DT 6 0.106 SIDE CHAIN 7 1 DT 8 0.072 SIDE CHAIN 7 2 DG 11 0.074 SIDE CHAIN 7 2 DT 14 0.080 SIDE CHAIN 7 2 DT 16 0.065 SIDE CHAIN 8 1 DT 6 0.102 SIDE CHAIN 8 1 DT 8 0.066 SIDE CHAIN 8 2 DT 16 0.097 SIDE CHAIN 8 2 DA 17 0.073 SIDE CHAIN 9 1 DA 5 0.073 SIDE CHAIN 9 1 DT 6 0.068 SIDE CHAIN 9 2 DT 16 0.068 SIDE CHAIN 9 2 DA 17 0.067 SIDE CHAIN 10 1 DT 6 0.088 SIDE CHAIN 10 1 DT 8 0.096 SIDE CHAIN 10 2 DG 11 0.112 SIDE CHAIN 10 2 DG 12 0.071 SIDE CHAIN 10 2 DT 14 0.060 SIDE CHAIN 10 2 DT 16 0.063 SIDE CHAIN 10 2 DA 17 0.077 SIDE CHAIN 11 1 DG 1 0.084 SIDE CHAIN 11 1 DG 2 0.071 SIDE CHAIN 11 1 DT 6 0.066 SIDE CHAIN 11 1 DT 8 0.074 SIDE CHAIN 11 2 DG 11 0.056 SIDE CHAIN 11 2 DG 12 0.102 SIDE CHAIN 11 2 DT 14 0.067 SIDE CHAIN 11 2 DT 16 0.070 SIDE CHAIN 11 2 DA 17 0.073 SIDE CHAIN 1 -3.38 0.50 117.00 113.62 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 1 3.81 0.50 117.70 121.51 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 1 -4.21 0.60 118.60 114.39 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 1 3.20 0.30 108.30 111.50 1 1 1 O4' C1' N1 DT DT DT 4 4 4 N 1 -3.99 0.60 122.90 118.91 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 1 -3.13 0.50 117.00 113.87 1 1 1 C4 C5 C6 DA DA DA 5 5 5 N 1 3.58 0.50 117.70 121.28 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 1 -5.24 0.60 118.60 113.36 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 1 3.29 0.30 108.30 111.59 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 1 3.21 0.50 117.70 120.91 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 1 -4.99 0.60 118.60 113.61 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 1 2.51 0.30 108.30 110.81 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 1 -5.23 0.70 121.90 116.67 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 1 -3.45 0.50 117.00 113.55 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 1 3.51 0.50 117.70 121.21 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 1 -5.84 0.60 118.60 112.76 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 1 2.15 0.30 108.30 110.45 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 1 -3.33 0.50 117.00 113.67 2 2 2 C4 C5 C6 DA DA DA 15 15 15 N 1 3.30 0.50 117.70 121.00 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 1 -5.83 0.60 118.60 112.77 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 1 -3.61 0.60 122.90 119.29 2 2 2 C6 C5 C7 DT DT DT 16 16 16 N 1 -3.79 0.50 117.00 113.21 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 1 3.61 0.50 117.70 121.31 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 1 -5.60 0.60 118.60 113.00 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 1 -3.71 0.60 122.90 119.19 2 2 2 C6 C5 C7 DT DT DT 18 18 18 N 1 -4.76 0.70 121.90 117.14 2 2 2 N3 C2 O2 DC DC DC 19 19 19 N 1 -4.23 0.70 121.90 117.67 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 2 -3.13 0.50 117.00 113.87 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 2 3.41 0.50 117.70 121.11 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 2 -4.56 0.60 118.60 114.04 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 2 -4.05 0.60 122.90 118.85 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 2 3.03 0.50 117.70 120.73 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 2 -4.95 0.60 118.60 113.65 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 2 4.89 0.30 108.30 113.19 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 2 3.25 0.50 117.70 120.95 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 2 -5.43 0.60 118.60 113.17 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 2 2.15 0.30 108.30 110.45 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 2 3.66 0.60 106.00 109.66 1 1 1 O4' C4' C3' DC DC DC 9 9 9 N 2 -4.26 0.70 121.90 117.64 1 1 1 N3 C2 O2 DC DC DC 9 9 9 N 2 -4.69 0.70 121.90 117.21 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 2 -3.27 0.50 117.00 113.73 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 2 3.15 0.50 117.70 120.85 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 2 -5.45 0.60 118.60 113.15 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 2 1.89 0.30 108.30 110.19 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 2 -3.19 0.50 117.00 113.81 2 2 2 C4 C5 C6 DA DA DA 15 15 15 N 2 3.72 0.50 117.70 121.42 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 2 -5.96 0.60 118.60 112.64 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 2 2.10 0.30 108.30 110.40 2 2 2 O4' C1' N1 DT DT DT 16 16 16 N 2 -3.70 0.50 117.00 113.30 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 2 3.73 0.50 117.70 121.43 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 2 -6.08 0.60 118.60 112.52 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 2 2.81 0.30 108.30 111.11 2 2 2 O4' C1' N1 DT DT DT 18 18 18 N 2 -3.66 0.60 122.90 119.24 2 2 2 C6 C5 C7 DT DT DT 18 18 18 N 3 3.83 0.60 106.00 109.83 1 1 1 O4' C4' C3' DG DG DG 2 2 2 N 3 -3.54 0.50 117.00 113.46 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 3 3.59 0.50 117.70 121.29 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 3 -4.97 0.60 118.60 113.63 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 3 3.38 0.30 108.30 111.68 1 1 1 O4' C1' N1 DT DT DT 4 4 4 N 3 -4.02 0.60 122.90 118.88 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 3 3.59 0.50 117.70 121.29 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 3 -5.26 0.60 118.60 113.34 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 3 2.29 0.30 108.30 110.59 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 3 3.22 0.50 117.70 120.92 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 3 -4.95 0.60 118.60 113.65 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 3 3.31 0.30 108.30 111.61 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 3 -4.26 0.60 122.90 118.64 1 1 1 C6 C5 C7 DT DT DT 8 8 8 N 3 1.90 0.30 108.30 110.20 1 1 1 O4' C1' N1 DC DC DC 10 10 10 N 3 -4.80 0.70 121.90 117.10 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 3 -3.56 0.50 117.00 113.44 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 3 3.51 0.50 117.70 121.21 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 3 -6.36 0.60 118.60 112.24 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 3 2.70 0.30 108.30 111.00 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 3 -4.42 0.60 122.90 118.48 2 2 2 C6 C5 C7 DT DT DT 14 14 14 N 3 -3.14 0.50 117.00 113.86 2 2 2 C4 C5 C6 DA DA DA 15 15 15 N 3 3.51 0.50 117.70 121.21 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 3 -5.65 0.60 118.60 112.95 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 3 3.35 0.30 108.30 111.65 2 2 2 O4' C1' N1 DT DT DT 16 16 16 N 3 -3.90 0.60 122.90 119.00 2 2 2 C6 C5 C7 DT DT DT 16 16 16 N 3 -3.71 0.50 117.00 113.29 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 3 3.39 0.50 117.70 121.09 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 3 -5.96 0.60 118.60 112.64 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 3 3.23 0.30 108.30 111.53 2 2 2 O4' C1' N1 DT DT DT 18 18 18 N 3 -3.71 0.60 122.30 118.59 2 2 2 N3 C2 O2 DT DT DT 18 18 18 N 3 -4.28 0.70 121.90 117.62 2 2 2 N3 C2 O2 DC DC DC 19 19 19 N 3 2.25 0.30 108.30 110.55 2 2 2 O4' C1' N1 DC DC DC 20 20 20 N 4 2.25 0.30 108.30 110.55 1 1 1 O4' C1' N9 DG DG DG 1 1 1 N 4 -3.07 0.50 117.00 113.93 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 4 3.62 0.50 117.70 121.32 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 4 -4.29 0.60 118.60 114.31 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 4 -3.92 0.60 122.90 118.98 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 4 3.25 0.50 117.70 120.95 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 4 -4.34 0.60 118.60 114.26 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 4 2.81 0.30 108.30 111.11 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 4 -3.63 0.60 122.90 119.27 1 1 1 C6 C5 C7 DT DT DT 6 6 6 N 4 3.61 0.50 117.70 121.31 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 4 -5.57 0.60 118.60 113.03 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 4 3.42 0.30 108.30 111.72 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 4 4.09 0.60 106.00 110.09 1 1 1 O4' C4' C3' DC DC DC 9 9 9 N 4 -4.26 0.70 121.90 117.64 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 4 1.92 0.30 108.30 110.22 2 2 2 O4' C1' N9 DG DG DG 11 11 11 N 4 -3.45 0.50 117.00 113.55 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 4 3.56 0.50 117.70 121.26 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 4 -5.51 0.60 118.60 113.09 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 4 1.92 0.30 108.30 110.22 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 4 -3.71 0.50 117.00 113.29 2 2 2 C4 C5 C6 DA DA DA 15 15 15 N 4 3.55 0.50 117.70 121.25 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 4 -6.90 0.60 118.60 111.70 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 4 1.83 0.30 108.30 110.13 2 2 2 O4' C1' N1 DT DT DT 16 16 16 N 4 -3.90 0.60 122.90 119.00 2 2 2 C6 C5 C7 DT DT DT 16 16 16 N 4 -3.34 0.50 117.00 113.66 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 4 3.58 0.50 117.70 121.28 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 4 -5.85 0.60 118.60 112.75 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 4 3.18 0.30 108.30 111.48 2 2 2 O4' C1' N1 DT DT DT 18 18 18 N 4 2.10 0.30 108.30 110.40 2 2 2 O4' C1' N1 DC DC DC 20 20 20 N 4 -5.21 0.70 121.90 116.69 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 5 3.63 0.60 106.00 109.63 1 1 1 O4' C4' C3' DG DG DG 2 2 2 N 5 -3.67 0.50 117.00 113.33 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 5 3.80 0.50 117.70 121.50 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 5 -5.34 0.60 118.60 113.26 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 5 -3.68 0.60 122.90 119.22 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 5 3.03 0.50 117.70 120.73 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 5 -4.49 0.60 118.60 114.11 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 5 2.11 0.30 108.30 110.41 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 5 3.39 0.50 117.70 121.09 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 5 -5.80 0.60 118.60 112.80 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 5 3.67 0.30 108.30 111.97 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 5 2.36 0.30 108.30 110.66 1 1 1 O4' C1' N1 DC DC DC 10 10 10 N 5 -4.93 0.70 121.90 116.97 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 5 3.83 0.60 106.00 109.83 2 2 2 O4' C4' C3' DG DG DG 12 12 12 N 5 -3.04 0.50 117.00 113.96 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 5 3.37 0.50 117.70 121.07 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 5 -5.01 0.60 118.60 113.59 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 5 -3.95 0.60 122.90 118.95 2 2 2 C6 C5 C7 DT DT DT 14 14 14 N 5 -3.42 0.50 117.00 113.58 2 2 2 C4 C5 C6 DA DA DA 15 15 15 N 5 3.57 0.50 117.70 121.27 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 5 -6.83 0.60 118.60 111.77 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 5 4.77 0.30 108.30 113.07 2 2 2 O4' C1' N1 DT DT DT 16 16 16 N 5 -3.67 0.50 117.00 113.33 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 5 3.78 0.50 117.70 121.48 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 5 -5.40 0.60 118.60 113.20 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 5 -4.11 0.60 122.90 118.79 2 2 2 C6 C5 C7 DT DT DT 18 18 18 N 5 -4.73 0.70 121.90 117.17 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 6 1.93 0.30 108.30 110.23 1 1 1 O4' C1' N9 DG DG DG 1 1 1 N 6 2.30 0.30 108.30 110.60 1 1 1 O4' C1' N9 DG DG DG 2 2 2 N 6 -3.07 0.50 117.00 113.93 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 6 3.41 0.50 117.70 121.11 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 6 2.74 0.30 108.30 111.04 1 1 1 O4' C1' N1 DT DT DT 4 4 4 N 6 3.32 0.50 117.70 121.02 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 6 -5.41 0.60 118.60 113.19 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 6 2.72 0.30 108.30 111.02 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 6 -3.64 0.60 122.90 119.26 1 1 1 C6 C5 C7 DT DT DT 6 6 6 N 6 -3.22 0.50 117.00 113.78 1 1 1 C4 C5 C6 DA DA DA 7 7 7 N 6 3.64 0.50 117.70 121.34 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 6 -6.16 0.60 118.60 112.44 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 6 4.75 0.30 108.30 113.05 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 6 4.13 0.60 106.00 110.13 1 1 1 O4' C4' C3' DC DC DC 9 9 9 N 6 -4.21 0.70 121.90 117.69 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 6 2.29 0.30 108.30 110.59 2 2 2 O4' C1' N9 DG DG DG 11 11 11 N 6 -3.79 0.50 117.00 113.21 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 6 3.58 0.50 117.70 121.28 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 6 -5.74 0.60 118.60 112.86 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 6 -3.71 0.60 122.90 119.19 2 2 2 C6 C5 C7 DT DT DT 14 14 14 N 6 3.93 0.60 106.00 109.93 2 2 2 O4' C4' C3' DA DA DA 15 15 15 N 6 -3.31 0.50 117.00 113.69 2 2 2 C4 C5 C6 DA DA DA 15 15 15 N 6 3.25 0.50 117.70 120.95 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 6 -5.32 0.60 118.60 113.28 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 6 3.01 0.30 108.30 111.31 2 2 2 O4' C1' N1 DT DT DT 16 16 16 N 6 -3.85 0.60 122.90 119.05 2 2 2 C6 C5 C7 DT DT DT 16 16 16 N 6 -3.40 0.50 117.00 113.60 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 6 3.89 0.50 117.70 121.59 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 6 -5.50 0.60 118.60 113.10 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 6 3.82 0.30 108.30 112.12 2 2 2 O4' C1' N1 DT DT DT 18 18 18 N 6 -4.40 0.70 121.90 117.50 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 7 2.51 0.30 108.30 110.81 1 1 1 O4' C1' N9 DG DG DG 1 1 1 N 7 -3.46 0.50 117.00 113.54 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 7 3.70 0.50 117.70 121.40 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 7 -5.13 0.60 118.60 113.47 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 7 2.45 0.30 108.30 110.75 1 1 1 O4' C1' N1 DT DT DT 4 4 4 N 7 -4.30 0.60 122.90 118.60 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 7 3.34 0.50 117.70 121.04 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 7 -4.48 0.60 118.60 114.12 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 7 1.91 0.30 108.30 110.21 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 7 -3.64 0.60 122.90 119.26 1 1 1 C6 C5 C7 DT DT DT 6 6 6 N 7 -3.41 0.50 117.00 113.59 1 1 1 C4 C5 C6 DA DA DA 7 7 7 N 7 3.57 0.50 117.70 121.27 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 7 -5.22 0.60 118.60 113.38 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 7 3.05 0.30 108.30 111.35 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 7 -5.10 0.70 121.90 116.80 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 7 -3.36 0.50 117.00 113.64 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 7 3.50 0.50 117.70 121.20 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 7 -4.93 0.60 118.60 113.67 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 7 2.07 0.30 108.30 110.37 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 7 -3.39 0.50 117.00 113.61 2 2 2 C4 C5 C6 DA DA DA 15 15 15 N 7 3.41 0.50 117.70 121.11 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 7 -6.01 0.60 118.60 112.59 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 7 -3.66 0.60 122.90 119.24 2 2 2 C6 C5 C7 DT DT DT 16 16 16 N 7 1.99 0.30 108.30 110.29 2 2 2 O4' C1' N9 DA DA DA 17 17 17 N 7 -3.59 0.50 117.00 113.41 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 7 3.62 0.50 117.70 121.32 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 7 -5.52 0.60 118.60 113.08 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 7 2.75 0.30 108.30 111.05 2 2 2 O4' C1' N1 DT DT DT 18 18 18 N 7 -4.00 0.60 122.90 118.90 2 2 2 C6 C5 C7 DT DT DT 18 18 18 N 7 4.20 0.60 118.90 123.10 2 2 2 N1 C2 O2 DC DC DC 20 20 20 N 7 -5.78 0.70 121.90 116.12 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 8 3.44 0.50 117.70 121.14 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 8 -4.36 0.60 118.60 114.24 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 8 2.22 0.30 108.30 110.52 1 1 1 O4' C1' N1 DT DT DT 4 4 4 N 8 -4.12 0.60 122.90 118.78 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 8 3.53 0.50 117.70 121.23 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 8 -4.66 0.60 118.60 113.94 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 8 2.63 0.30 108.30 110.93 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 8 -3.67 0.60 122.90 119.23 1 1 1 C6 C5 C7 DT DT DT 6 6 6 N 8 -3.23 0.50 117.00 113.77 1 1 1 C4 C5 C6 DA DA DA 7 7 7 N 8 3.67 0.50 117.70 121.37 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 8 -5.78 0.60 118.60 112.82 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 8 3.61 0.30 108.30 111.91 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 8 -4.65 0.70 121.90 117.25 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 8 1.88 0.30 108.30 110.18 2 2 2 O4' C1' N9 DG DG DG 11 11 11 N 8 -3.79 0.50 117.00 113.21 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 8 3.70 0.50 117.70 121.40 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 8 -5.92 0.60 118.60 112.68 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 8 3.36 0.30 108.30 111.66 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 8 -4.67 0.60 122.90 118.23 2 2 2 C6 C5 C7 DT DT DT 14 14 14 N 8 3.44 0.50 117.70 121.14 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 8 -5.29 0.60 118.60 113.31 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 8 3.04 0.30 108.30 111.34 2 2 2 O4' C1' N1 DT DT DT 16 16 16 N 8 -3.38 0.50 117.00 113.62 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 8 3.79 0.50 117.70 121.49 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 8 -5.05 0.60 118.60 113.55 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 8 -3.63 0.60 122.90 119.27 2 2 2 C6 C5 C7 DT DT DT 18 18 18 N 8 -4.49 0.70 121.90 117.41 2 2 2 N3 C2 O2 DC DC DC 19 19 19 N 8 -4.40 0.70 121.90 117.50 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 9 -3.43 0.50 117.00 113.57 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 9 3.72 0.50 117.70 121.42 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 9 -5.94 0.60 118.60 112.66 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 9 2.07 0.30 108.30 110.37 1 1 1 O4' C1' N1 DT DT DT 4 4 4 N 9 -3.97 0.60 122.90 118.93 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 9 -3.17 0.50 117.00 113.83 1 1 1 C4 C5 C6 DA DA DA 5 5 5 N 9 3.41 0.50 117.70 121.11 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 9 -5.02 0.60 118.60 113.58 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 9 3.74 0.30 108.30 112.04 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 9 -3.63 0.60 122.90 119.27 1 1 1 C6 C5 C7 DT DT DT 6 6 6 N 9 3.33 0.50 117.70 121.03 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 9 -4.64 0.60 118.60 113.96 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 9 3.15 0.30 108.30 111.45 1 1 1 O4' C1' N1 DT DT DT 8 8 8 N 9 -3.86 0.60 122.90 119.04 1 1 1 C6 C5 C7 DT DT DT 8 8 8 N 9 -4.30 0.70 121.90 117.60 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 9 2.32 0.30 108.30 110.62 2 2 2 O4' C1' N9 DG DG DG 12 12 12 N 9 -3.53 0.50 117.00 113.47 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 9 3.62 0.50 117.70 121.32 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 9 -5.36 0.60 118.60 113.24 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 9 3.21 0.30 108.30 111.51 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 9 -3.62 0.60 122.90 119.28 2 2 2 C6 C5 C7 DT DT DT 14 14 14 N 9 3.21 0.50 117.70 120.91 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 9 -5.23 0.60 118.60 113.37 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 9 2.49 0.30 108.30 110.79 2 2 2 O4' C1' N1 DT DT DT 16 16 16 N 9 -3.32 0.50 117.00 113.68 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 9 3.60 0.50 117.70 121.30 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 9 -4.96 0.60 118.60 113.64 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 9 -4.01 0.60 122.90 118.89 2 2 2 C6 C5 C7 DT DT DT 18 18 18 N 9 -4.78 0.70 121.90 117.12 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 10 5.55 0.30 108.30 113.85 1 1 1 O4' C1' N9 DG DG DG 1 1 1 N 10 -3.51 0.50 117.00 113.49 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 10 3.67 0.50 117.70 121.37 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 10 -5.42 0.60 118.60 113.18 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 10 -4.00 0.60 122.90 118.90 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 10 3.33 0.30 108.30 111.63 1 1 1 O4' C1' N9 DA DA DA 5 5 5 N 10 -3.22 0.50 117.00 113.78 1 1 1 C4 C5 C6 DA DA DA 5 5 5 N 10 3.69 0.50 117.70 121.39 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 10 -5.21 0.60 118.60 113.39 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 10 3.93 0.30 108.30 112.23 1 1 1 O4' C1' N1 DT DT DT 6 6 6 N 10 -3.30 0.50 117.00 113.70 1 1 1 C4 C5 C6 DA DA DA 7 7 7 N 10 3.70 0.50 117.70 121.40 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 10 -5.57 0.60 118.60 113.03 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 10 -3.61 0.60 122.90 119.29 1 1 1 C6 C5 C7 DT DT DT 8 8 8 N 10 -4.50 0.70 121.90 117.40 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 10 2.73 0.30 108.30 111.03 2 2 2 O4' C1' N9 DG DG DG 12 12 12 N 10 -3.14 0.50 117.00 113.86 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 10 3.62 0.50 117.70 121.32 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 10 -4.98 0.60 118.60 113.62 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 10 3.20 0.30 108.30 111.50 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 10 -3.78 0.60 122.90 119.12 2 2 2 C6 C5 C7 DT DT DT 14 14 14 N 10 3.23 0.50 117.70 120.93 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 10 -4.75 0.60 118.60 113.85 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 10 -3.90 0.50 117.00 113.10 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 10 3.59 0.50 117.70 121.29 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 10 -6.52 0.60 118.60 112.08 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 10 -4.31 0.60 122.90 118.59 2 2 2 C6 C5 C7 DT DT DT 18 18 18 N 10 -4.37 0.70 121.90 117.53 2 2 2 N3 C2 O2 DC DC DC 19 19 19 N 10 -5.24 0.70 121.90 116.66 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 11 3.49 0.30 108.30 111.79 1 1 1 O4' C1' N9 DG DG DG 1 1 1 N 11 2.01 0.30 108.30 110.31 1 1 1 O4' C1' N9 DG DG DG 2 2 2 N 11 -3.09 0.50 117.00 113.91 1 1 1 C4 C5 C6 DA DA DA 3 3 3 N 11 3.65 0.50 117.70 121.35 1 1 1 C5 C6 N1 DA DA DA 3 3 3 N 11 -4.27 0.60 118.60 114.33 1 1 1 N1 C6 N6 DA DA DA 3 3 3 N 11 1.87 0.30 108.30 110.17 1 1 1 O4' C1' N1 DT DT DT 4 4 4 N 11 -5.30 0.60 122.90 117.60 1 1 1 C6 C5 C7 DT DT DT 4 4 4 N 11 -3.29 0.50 117.00 113.71 1 1 1 C4 C5 C6 DA DA DA 5 5 5 N 11 3.81 0.50 117.70 121.51 1 1 1 C5 C6 N1 DA DA DA 5 5 5 N 11 -5.34 0.60 118.60 113.26 1 1 1 N1 C6 N6 DA DA DA 5 5 5 N 11 -3.30 0.50 117.00 113.70 1 1 1 C4 C5 C6 DA DA DA 7 7 7 N 11 3.90 0.50 117.70 121.60 1 1 1 C5 C6 N1 DA DA DA 7 7 7 N 11 -5.21 0.60 118.60 113.39 1 1 1 N1 C6 N6 DA DA DA 7 7 7 N 11 2.37 0.30 108.30 110.67 1 1 1 O4' C1' N1 DC DC DC 10 10 10 N 11 -4.84 0.70 121.90 117.06 1 1 1 N3 C2 O2 DC DC DC 10 10 10 N 11 -3.59 0.50 117.00 113.41 2 2 2 C4 C5 C6 DA DA DA 13 13 13 N 11 3.48 0.50 117.70 121.18 2 2 2 C5 C6 N1 DA DA DA 13 13 13 N 11 -5.45 0.60 118.60 113.15 2 2 2 N1 C6 N6 DA DA DA 13 13 13 N 11 1.89 0.30 108.30 110.19 2 2 2 O4' C1' N1 DT DT DT 14 14 14 N 11 -3.70 0.60 122.90 119.20 2 2 2 C6 C5 C7 DT DT DT 14 14 14 N 11 3.89 0.60 106.00 109.89 2 2 2 O4' C4' C3' DA DA DA 15 15 15 N 11 -3.27 0.50 117.00 113.73 2 2 2 C4 C5 C6 DA DA DA 15 15 15 N 11 3.57 0.50 117.70 121.27 2 2 2 C5 C6 N1 DA DA DA 15 15 15 N 11 -6.38 0.60 118.60 112.22 2 2 2 N1 C6 N6 DA DA DA 15 15 15 N 11 2.95 0.30 108.30 111.25 2 2 2 O4' C1' N1 DT DT DT 16 16 16 N 11 -3.81 0.50 117.00 113.19 2 2 2 C4 C5 C6 DA DA DA 17 17 17 N 11 3.86 0.50 117.70 121.56 2 2 2 C5 C6 N1 DA DA DA 17 17 17 N 11 -6.20 0.60 118.60 112.40 2 2 2 N1 C6 N6 DA DA DA 17 17 17 N 11 -3.68 0.60 122.90 119.22 2 2 2 C6 C5 C7 DT DT DT 18 18 18 N 11 3.46 0.30 108.30 111.76 2 2 2 O4' C1' N1 DC DC DC 19 19 19 N 11 -4.57 0.70 121.90 117.33 2 2 2 N3 C2 O2 DC DC DC 19 19 19 N 11 -4.71 0.70 121.90 117.19 2 2 2 N3 C2 O2 DC DC DC 20 20 20 N 5'-D(*GP*GP*AP*TP*AP*TP*AP*TP*CP*C)-3'/Netropsin minimized average structure, model 1 minimized average NMR Structure of the Self-Complementary 10 mer DNA Duplex 5'-GGATATATCC-3' in Complex with Netropsin 1 N N 1 N N 2 N N hydrog WATSON-CRICK 1 DG 1 A N1 DG 1 1_555 2 DC 20 B N3 DC 10 1_555 hydrog WATSON-CRICK 1 DG 1 A N2 DG 1 1_555 2 DC 20 B O2 DC 10 1_555 hydrog WATSON-CRICK 1 DG 1 A O6 DG 1 1_555 2 DC 20 B N4 DC 10 1_555 hydrog WATSON-CRICK 1 DG 2 A N1 DG 2 1_555 2 DC 19 B N3 DC 9 1_555 hydrog WATSON-CRICK 1 DG 2 A N2 DG 2 1_555 2 DC 19 B O2 DC 9 1_555 hydrog WATSON-CRICK 1 DG 2 A O6 DG 2 1_555 2 DC 19 B N4 DC 9 1_555 hydrog WATSON-CRICK 1 DA 3 A N1 DA 3 1_555 2 DT 18 B N3 DT 8 1_555 hydrog WATSON-CRICK 1 DA 3 A N6 DA 3 1_555 2 DT 18 B O4 DT 8 1_555 hydrog WATSON-CRICK 1 DT 4 A N3 DT 4 1_555 2 DA 17 B N1 DA 7 1_555 hydrog WATSON-CRICK 1 DT 4 A O4 DT 4 1_555 2 DA 17 B N6 DA 7 1_555 hydrog WATSON-CRICK 1 DA 5 A N1 DA 5 1_555 2 DT 16 B N3 DT 6 1_555 hydrog WATSON-CRICK 1 DA 5 A N6 DA 5 1_555 2 DT 16 B O4 DT 6 1_555 hydrog WATSON-CRICK 1 DT 6 A N3 DT 6 1_555 2 DA 15 B N1 DA 5 1_555 hydrog WATSON-CRICK 1 DT 6 A O4 DT 6 1_555 2 DA 15 B N6 DA 5 1_555 hydrog WATSON-CRICK 1 DA 7 A N1 DA 7 1_555 2 DT 14 B N3 DT 4 1_555 hydrog WATSON-CRICK 1 DA 7 A N6 DA 7 1_555 2 DT 14 B O4 DT 4 1_555 hydrog WATSON-CRICK 1 DT 8 A N3 DT 8 1_555 2 DA 13 B N1 DA 3 1_555 hydrog WATSON-CRICK 1 DT 8 A O4 DT 8 1_555 2 DA 13 B N6 DA 3 1_555 hydrog WATSON-CRICK 1 DC 9 A N3 DC 9 1_555 2 DG 12 B N1 DG 2 1_555 hydrog WATSON-CRICK 1 DC 9 A N4 DC 9 1_555 2 DG 12 B O6 DG 2 1_555 hydrog WATSON-CRICK 1 DC 9 A O2 DC 9 1_555 2 DG 12 B N2 DG 2 1_555 hydrog WATSON-CRICK 1 DC 10 A N3 DC 10 1_555 2 DG 11 B N1 DG 1 1_555 hydrog WATSON-CRICK 1 DC 10 A N4 DC 10 1_555 2 DG 11 B O6 DG 1 1_555 hydrog WATSON-CRICK 1 DC 10 A O2 DC 10 1_555 2 DG 11 B N2 DG 1 1_555 DNA microstructure, Induced DNA binding, DNA minor groove variations, DNA 2LWH PDB 1 2LWH 1 10 2LWH 1 10 2LWH 1 1 1 10 11 20 2LWH 11 20 2LWH 2 1 1 10 BINDING SITE FOR RESIDUE NT 1 101 Software 12 1 DT 4 A DT 4 12 1_555 1 DA 5 A DA 5 12 1_555 1 DT 6 A DT 6 12 1_555 1 DA 7 A DA 7 12 1_555 1 DT 8 A DT 8 12 1_555 1 DC 9 A DC 9 12 1_555 2 DT 14 B DT 4 12 1_555 2 DA 15 B DA 5 12 1_555 2 DT 16 B DT 6 12 1_555 2 DA 17 B DA 7 12 1_555 2 DT 18 B DT 8 12 1_555 2 DC 19 B DC 9 12 1_555