1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Chartron, J.W.
Vandervelde, D.G.
Clemons Jr., W.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Cell Rep
2211-1247
2
1620
1632
10.1016/j.celrep.2012.10.010
23142665
Structures of the Sgt2/SGTA Dimerization Domain with the Get5/UBL4A UBL Domain Reveal an Interaction that Forms a Conserved Dynamic Interface.
2012
10.2210/pdb2lxc/pdb
pdb_00002lxc
9170.796
Ubiquitin-like protein MDY2
ubiquitin-like domain
1
man
polymer
7889.721
Small glutamine-rich tetratricopeptide repeat-containing protein 2
N-terminal domain
2
man
polymer
Golgi to ER traffic protein 5, Mating-deficient protein 2, Translation machinery-associated protein 24
SGT/UBP, Viral protein U-binding protein
no
no
MVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMIKPNL
E
MVHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMIKPNL
E
A
polypeptide(L)
no
no
SVDSASKEEIAALIVNYFSSIVEKKEISEDGADSLNVAMDCISEAFGFEREAVSGILGKSEFKGQHLADILNSA
SVDSASKEEIAALIVNYFSSIVEKKEISEDGADSLNVAMDCISEAFGFEREAVSGILGKSEFKGQHLADILNSA
B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Baker's yeast
ATCC 204508 / S288c
sample
GET5, MDY2, TMA24, YOL111C
559292
Saccharomyces cerevisiae
562
Escherichia coli
NiCo21(DE3)
plasmid
pET33b
Baker's yeast
ATCC 204508 / S288c
sample
SGT2, UNF346, YOR007C
559292
Saccharomyces cerevisiae
562
Escherichia coli
NiCo21(DE3)
plasmid
pET33b
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
struct_ref_seq_dif
repository
Initial release
Database references
Database references
Data collection
Database references
Other
1
0
2012-11-21
1
1
2012-11-28
1
2
2013-01-16
1
3
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
Crystal structure of Get5 ubiquitin like domain
Solution structure of Get5 ubiquitin like domain
Solution structure of Sgt2 homodimerization domain
Crystal structure of SGTA homodimerization domain, the human homolog
Crystal structure of SGTA homodimerization domain, the human homolog
Crystal structure of SGTA homodimerization domain, the human homolog
BMRB
Y
RCSB
2012-08-19
REL
REL
REL
REL
structures with the lowest energy
200
10
2D 1H-15N HSQC
3D 1H-15N NOESY
3D 1H-15N TOCSY
2D 1H-13C HSQC aliphatic
2D 1H-13C HSQC aromatic
2D 1H-15N HSQC
3D HNCACB
3D HNCO
3D HCCH-TOCSY
3D HCCH-TOCSY
3D 1H-15N NOESY
3D 1H-13C NOESY aliphatic
2D 1H-15N HSQC
2D 1H-15N HSQC
1
mM
2
mM
[U-100% 13C; U-100% 15N]
10
mM
50
mM
50
mM
0.02
%
1
mM
2
mM
[U-100% 13C; U-100% 15N]
10
mM
50
mM
50
mM
0.02
%
3.5
%
1
mM
[U-100% 13C; U-100% 15N]
2
mM
10
mM
50
mM
50
mM
0.02
%
1
mM
[U-100% 13C; U-100% 15N]
2
mM
10
mM
50
mM
50
mM
0.02
%
3.5
%
0
6.1
ambient
310
K
STRUCTURES OF ASYMMETRICALLY LABELED COMPLEX (SAMPLE_1 AND SAMPLE_3) WERE USED TO DETERMINE THE SEPERATE STRUCTURES OF GET5 OR SGT2, IN THEIR COMPLEX STATES. STRUCTURES ARE REFINED IN EXPLICIT WATER. AMBIGUOUS INTERACTION RESTRAINTS, RESIDUAL DIPOLAR COUPLINGS AND INTERMOLECULAR NOES WERE USED TO DOCK THE STRUCTURES OF GET5 AND SGT2, DETERMINED IN THEIR COMPLEX STATES. STRUCTURES ARE SELECTED FROM THE BEST SCORING CLUSTER BY HADDOCK SCORES AND REFINED IN WATER.
simulated annealing, experimentally driven docking
1
lowest energy
1 mM Get5, 2 mM [U-100% 13C; U-100% 15N] Sgt2, 10 mM Bis-Tris, 50 mM L-arginine, 50 mM L-glutamic acid, 0.02 % sodium azide, 90% H2O/10% D2O
90% H2O/10% D2O
1 mM Get5, 2 mM [U-100% 13C; U-100% 15N] Sgt2, 10 mM Bis-Tris, 50 mM L-arginine, 50 mM L-glutamic acid, 0.02 % sodium azide, 3.5 % polyacrylamide, 90% H2O/10% D2O
90% H2O/10% D2O
1 mM [U-100% 13C; U-100% 15N] Get5, 2 mM Sgt2, 10 mM Bis-Tris, 50 mM L-arginine, 50 mM L-glutamic acid, 0.02 % sodium azide, 90% H2O/10% D2O
90% H2O/10% D2O
1 mM [U-100% 13C; U-100% 15N] Get5, 2 mM Sgt2, 10 mM Bis-Tris, 50 mM L-arginine, 50 mM L-glutamic acid, 0.02 % sodium azide, 3.5 % polyacrylamide, 90% H2O/10% D2O
90% H2O/10% D2O
Varian
collection
VnmrJ
CCPN
chemical shift assignment
Analysis
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
Cornilescu, Delaglio and Bax
data analysis
TALOS+
Linge, O'Donoghue and Nilges
structure solution
ARIA
2.3
Linge, O'Donoghue and Nilges
refinement
ARIA
2.3
Alexandre Bonvin
structure solution
HADDOCK
2.1
Bruker Biospin
collection
TopSpin
Zweckstetter and Bax
data analysis
PALES
600
Varian
INOVA
Varian INOVA
800
Bruker
AVANCE
Bruker Avance
MET
73
n
1
MET
73
A
VAL
74
n
2
VAL
74
A
HIS
75
n
3
HIS
75
A
LEU
76
n
4
LEU
76
A
THR
77
n
5
THR
77
A
LEU
78
n
6
LEU
78
A
LYS
79
n
7
LYS
79
A
LYS
80
n
8
LYS
80
A
ILE
81
n
9
ILE
81
A
GLN
82
n
10
GLN
82
A
ALA
83
n
11
ALA
83
A
PRO
84
n
12
PRO
84
A
LYS
85
n
13
LYS
85
A
PHE
86
n
14
PHE
86
A
SER
87
n
15
SER
87
A
ILE
88
n
16
ILE
88
A
GLU
89
n
17
GLU
89
A
HIS
90
n
18
HIS
90
A
ASP
91
n
19
ASP
91
A
PHE
92
n
20
PHE
92
A
SER
93
n
21
SER
93
A
PRO
94
n
22
PRO
94
A
SER
95
n
23
SER
95
A
ASP
96
n
24
ASP
96
A
THR
97
n
25
THR
97
A
ILE
98
n
26
ILE
98
A
LEU
99
n
27
LEU
99
A
GLN
100
n
28
GLN
100
A
ILE
101
n
29
ILE
101
A
LYS
102
n
30
LYS
102
A
GLN
103
n
31
GLN
103
A
HIS
104
n
32
HIS
104
A
LEU
105
n
33
LEU
105
A
ILE
106
n
34
ILE
106
A
SER
107
n
35
SER
107
A
GLU
108
n
36
GLU
108
A
GLU
109
n
37
GLU
109
A
LYS
110
n
38
LYS
110
A
ALA
111
n
39
ALA
111
A
SER
112
n
40
SER
112
A
HIS
113
n
41
HIS
113
A
ILE
114
n
42
ILE
114
A
SER
115
n
43
SER
115
A
GLU
116
n
44
GLU
116
A
ILE
117
n
45
ILE
117
A
LYS
118
n
46
LYS
118
A
LEU
119
n
47
LEU
119
A
LEU
120
n
48
LEU
120
A
LEU
121
n
49
LEU
121
A
LYS
122
n
50
LYS
122
A
GLY
123
n
51
GLY
123
A
LYS
124
n
52
LYS
124
A
VAL
125
n
53
VAL
125
A
LEU
126
n
54
LEU
126
A
HIS
127
n
55
HIS
127
A
ASP
128
n
56
ASP
128
A
ASN
129
n
57
ASN
129
A
LEU
130
n
58
LEU
130
A
PHE
131
n
59
PHE
131
A
LEU
132
n
60
LEU
132
A
SER
133
n
61
SER
133
A
ASP
134
n
62
ASP
134
A
LEU
135
n
63
LEU
135
A
LYS
136
n
64
LYS
136
A
VAL
137
n
65
VAL
137
A
THR
138
n
66
THR
138
A
PRO
139
n
67
PRO
139
A
ALA
140
n
68
ALA
140
A
ASN
141
n
69
ASN
141
A
SER
142
n
70
SER
142
A
THR
143
n
71
THR
143
A
ILE
144
n
72
ILE
144
A
THR
145
n
73
THR
145
A
VAL
146
n
74
VAL
146
A
MET
147
n
75
MET
147
A
ILE
148
n
76
ILE
148
A
LYS
149
n
77
LYS
149
A
PRO
150
n
78
PRO
150
A
ASN
151
n
79
ASN
151
A
LEU
152
n
80
LEU
152
A
GLU
153
n
81
GLU
153
A
SER
-1
n
1
SER
-1
B
VAL
0
n
2
VAL
0
B
ASP
1
n
3
ASP
1
B
SER
2
n
4
SER
2
B
ALA
3
n
5
ALA
3
B
SER
4
n
6
SER
4
B
LYS
5
n
7
LYS
5
B
GLU
6
n
8
GLU
6
B
GLU
7
n
9
GLU
7
B
ILE
8
n
10
ILE
8
B
ALA
9
n
11
ALA
9
B
ALA
10
n
12
ALA
10
B
LEU
11
n
13
LEU
11
B
ILE
12
n
14
ILE
12
B
VAL
13
n
15
VAL
13
B
ASN
14
n
16
ASN
14
B
TYR
15
n
17
TYR
15
B
PHE
16
n
18
PHE
16
B
SER
17
n
19
SER
17
B
SER
18
n
20
SER
18
B
ILE
19
n
21
ILE
19
B
VAL
20
n
22
VAL
20
B
GLU
21
n
23
GLU
21
B
LYS
22
n
24
LYS
22
B
LYS
23
n
25
LYS
23
B
GLU
24
n
26
GLU
24
B
ILE
25
n
27
ILE
25
B
SER
26
n
28
SER
26
B
GLU
27
n
29
GLU
27
B
ASP
28
n
30
ASP
28
B
GLY
29
n
31
GLY
29
B
ALA
30
n
32
ALA
30
B
ASP
31
n
33
ASP
31
B
SER
32
n
34
SER
32
B
LEU
33
n
35
LEU
33
B
ASN
34
n
36
ASN
34
B
VAL
35
n
37
VAL
35
B
ALA
36
n
38
ALA
36
B
MET
37
n
39
MET
37
B
ASP
38
n
40
ASP
38
B
CYS
39
n
41
CYS
39
B
ILE
40
n
42
ILE
40
B
SER
41
n
43
SER
41
B
GLU
42
n
44
GLU
42
B
ALA
43
n
45
ALA
43
B
PHE
44
n
46
PHE
44
B
GLY
45
n
47
GLY
45
B
PHE
46
n
48
PHE
46
B
GLU
47
n
49
GLU
47
B
ARG
48
n
50
ARG
48
B
GLU
49
n
51
GLU
49
B
ALA
50
n
52
ALA
50
B
VAL
51
n
53
VAL
51
B
SER
52
n
54
SER
52
B
GLY
53
n
55
GLY
53
B
ILE
54
n
56
ILE
54
B
LEU
55
n
57
LEU
55
B
GLY
56
n
58
GLY
56
B
LYS
57
n
59
LYS
57
B
SER
58
n
60
SER
58
B
GLU
59
n
61
GLU
59
B
PHE
60
n
62
PHE
60
B
LYS
61
n
63
LYS
61
B
GLY
62
n
64
GLY
62
B
GLN
63
n
65
GLN
63
B
HIS
64
n
66
HIS
64
B
LEU
65
n
67
LEU
65
B
ALA
66
n
68
ALA
66
B
ASP
67
n
69
ASP
67
B
ILE
68
n
70
ILE
68
B
LEU
69
n
71
LEU
69
B
ASN
70
n
72
ASN
70
B
SER
71
n
73
SER
71
B
ALA
72
n
74
ALA
72
B
SER
-1
n
1
SER
-1
C
VAL
0
n
2
VAL
0
C
ASP
1
n
3
ASP
1
C
SER
2
n
4
SER
2
C
ALA
3
n
5
ALA
3
C
SER
4
n
6
SER
4
C
LYS
5
n
7
LYS
5
C
GLU
6
n
8
GLU
6
C
GLU
7
n
9
GLU
7
C
ILE
8
n
10
ILE
8
C
ALA
9
n
11
ALA
9
C
ALA
10
n
12
ALA
10
C
LEU
11
n
13
LEU
11
C
ILE
12
n
14
ILE
12
C
VAL
13
n
15
VAL
13
C
ASN
14
n
16
ASN
14
C
TYR
15
n
17
TYR
15
C
PHE
16
n
18
PHE
16
C
SER
17
n
19
SER
17
C
SER
18
n
20
SER
18
C
ILE
19
n
21
ILE
19
C
VAL
20
n
22
VAL
20
C
GLU
21
n
23
GLU
21
C
LYS
22
n
24
LYS
22
C
LYS
23
n
25
LYS
23
C
GLU
24
n
26
GLU
24
C
ILE
25
n
27
ILE
25
C
SER
26
n
28
SER
26
C
GLU
27
n
29
GLU
27
C
ASP
28
n
30
ASP
28
C
GLY
29
n
31
GLY
29
C
ALA
30
n
32
ALA
30
C
ASP
31
n
33
ASP
31
C
SER
32
n
34
SER
32
C
LEU
33
n
35
LEU
33
C
ASN
34
n
36
ASN
34
C
VAL
35
n
37
VAL
35
C
ALA
36
n
38
ALA
36
C
MET
37
n
39
MET
37
C
ASP
38
n
40
ASP
38
C
CYS
39
n
41
CYS
39
C
ILE
40
n
42
ILE
40
C
SER
41
n
43
SER
41
C
GLU
42
n
44
GLU
42
C
ALA
43
n
45
ALA
43
C
PHE
44
n
46
PHE
44
C
GLY
45
n
47
GLY
45
C
PHE
46
n
48
PHE
46
C
GLU
47
n
49
GLU
47
C
ARG
48
n
50
ARG
48
C
GLU
49
n
51
GLU
49
C
ALA
50
n
52
ALA
50
C
VAL
51
n
53
VAL
51
C
SER
52
n
54
SER
52
C
GLY
53
n
55
GLY
53
C
ILE
54
n
56
ILE
54
C
LEU
55
n
57
LEU
55
C
GLY
56
n
58
GLY
56
C
LYS
57
n
59
LYS
57
C
SER
58
n
60
SER
58
C
GLU
59
n
61
GLU
59
C
PHE
60
n
62
PHE
60
C
LYS
61
n
63
LYS
61
C
GLY
62
n
64
GLY
62
C
GLN
63
n
65
GLN
63
C
HIS
64
n
66
HIS
64
C
LEU
65
n
67
LEU
65
C
ALA
66
n
68
ALA
66
C
ASP
67
n
69
ASP
67
C
ILE
68
n
70
ILE
68
C
LEU
69
n
71
LEU
69
C
ASN
70
n
72
ASN
70
C
SER
71
n
73
SER
71
C
ALA
72
n
74
ALA
72
C
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
92
A
O
PHE
20
A
N
VAL
74
A
N
VAL
2
A
N
LYS
79
A
N
LYS
7
A
O
ILE
144
A
O
ILE
72
A
O
THR
145
A
O
THR
73
A
N
LEU
120
A
N
LEU
48
A
N
LEU
121
A
N
LEU
49
A
O
LYS
124
A
O
LYS
52
1
B
B
H2
OD1
SER
ASP
-1
1
1.56
1
A
B
HE2
OD2
HIS
ASP
127
28
1.58
1
A
C
HZ3
OD2
LYS
ASP
122
38
1.58
1
A
A
HZ1
OD2
LYS
ASP
102
128
1.59
1
A
B
HZ1
OD2
LYS
ASP
149
38
1.60
2
A
C
HZ2
OD1
LYS
ASP
79
31
1.56
2
A
B
HZ2
OD1
LYS
ASP
149
38
1.59
2
B
B
O
HG
VAL
CYS
35
39
1.59
2
A
A
H1
OD1
MET
ASP
73
91
1.59
2
A
C
HZ3
OD2
LYS
ASP
85
28
1.60
3
B
B
HZ2
OE2
LYS
GLU
22
24
1.55
3
B
C
OD1
HZ3
ASP
LYS
67
57
1.56
3
A
A
HZ1
OD2
LYS
ASP
102
128
1.57
4
A
A
HZ1
OD2
LYS
ASP
102
128
1.53
4
A
C
HZ2
OD2
LYS
ASP
122
38
1.55
4
B
B
OE1
HZ1
GLU
LYS
21
22
1.56
4
A
B
HZ2
OD1
LYS
ASP
149
38
1.57
4
B
C
H1
OE2
SER
GLU
-1
24
1.57
4
B
B
OD2
HH12
ASP
ARG
38
48
1.58
5
A
C
HZ2
OD1
LYS
ASP
122
31
1.53
5
B
B
OD1
HH11
ASP
ARG
38
48
1.56
5
C
C
H1
OD2
SER
ASP
-1
67
1.59
5
B
C
OE1
HZ1
GLU
LYS
24
5
1.59
5
C
C
OE2
HH21
GLU
ARG
47
48
1.59
5
B
C
HG
OG
CYS
SER
39
32
1.60
6
A
C
HZ2
OD2
LYS
ASP
122
38
1.56
6
A
C
HZ2
OD2
LYS
ASP
85
28
1.56
6
B
B
HZ2
OE2
LYS
GLU
22
24
1.57
6
A
A
HZ1
OD2
LYS
ASP
102
128
1.58
6
C
C
HZ1
OE2
LYS
GLU
22
24
1.60
7
C
C
HZ3
OE2
LYS
GLU
22
24
1.59
7
A
C
HZ1
OD1
LYS
ASP
79
31
1.59
7
B
C
HZ1
OD1
LYS
ASP
57
67
1.60
8
C
C
HZ3
OE2
LYS
GLU
22
24
1.56
8
A
C
HZ2
OD2
LYS
ASP
85
28
1.56
8
B
C
HZ1
OE1
LYS
GLU
5
24
1.57
8
A
A
HZ2
OD2
LYS
ASP
102
128
1.58
8
B
B
HZ2
OE2
LYS
GLU
22
24
1.59
9
A
C
HZ2
OD2
LYS
ASP
85
28
1.57
9
B
C
OE1
HZ1
GLU
LYS
24
5
1.57
9
A
B
HZ1
OD2
LYS
ASP
118
31
1.57
9
C
C
OE1
HZ1
GLU
LYS
59
61
1.59
9
B
B
HG
OE1
SER
GLU
4
7
1.59
9
C
C
OE2
HZ1
GLU
LYS
21
22
1.59
9
B
B
HZ2
OE2
LYS
GLU
22
24
1.60
10
A
B
HZ2
OD2
LYS
ASP
149
38
1.55
10
B
C
OE1
HZ1
GLU
LYS
24
5
1.56
10
A
C
HZ2
OD1
LYS
ASP
85
28
1.56
10
B
C
HZ2
OE1
LYS
GLU
5
24
1.56
10
B
B
OE1
HZ1
GLU
LYS
59
61
1.56
10
C
C
HZ3
OE2
LYS
GLU
22
24
1.57
10
C
C
OD1
HH11
ASP
ARG
38
48
1.59
10
C
C
HZ1
OE2
LYS
GLU
23
27
1.59
10
B
B
HZ1
OE2
LYS
GLU
23
27
1.60
1
A
SER
112
-94.46
-61.35
1
A
LYS
122
36.43
59.39
1
A
LYS
136
67.94
99.38
1
A
ASN
141
-132.83
-72.61
1
B
ASP
1
-56.40
106.78
1
B
GLU
24
-90.60
33.68
1
B
LYS
57
-157.72
23.63
1
B
SER
58
-81.61
35.53
1
B
GLU
59
50.82
73.04
1
B
PHE
60
-67.23
94.93
1
B
GLN
63
-67.34
90.56
1
B
ALA
66
59.51
19.83
1
B
ASN
70
-100.74
41.67
1
C
VAL
0
-106.54
50.37
1
C
ASP
1
-68.96
96.32
1
C
LYS
57
-151.35
28.75
1
C
SER
58
-87.55
30.82
1
C
GLU
59
61.05
86.33
1
C
ASN
70
-92.16
44.71
1
C
SER
71
-94.21
31.58
2
A
LYS
136
63.07
99.18
2
B
ASP
1
-171.11
-79.18
2
B
SER
2
-155.53
-31.72
2
B
LEU
69
70.66
-67.80
2
B
ASN
70
-148.88
-14.43
2
C
ASP
1
-135.39
-58.93
2
C
SER
2
-157.01
-21.53
2
C
HIS
64
-161.67
113.16
2
C
LEU
69
69.53
-73.95
3
A
LYS
136
63.43
92.20
3
A
ASN
141
-128.63
-75.02
3
A
SER
142
57.66
13.27
3
B
VAL
0
-118.31
-162.57
3
B
ASP
1
-156.96
-84.67
3
B
SER
2
-162.94
12.91
3
B
ILE
68
-68.70
97.26
3
B
LEU
69
63.80
-96.37
3
C
ASP
1
-150.09
-77.63
3
C
SER
2
-170.35
9.56
3
C
LEU
69
68.36
-74.62
3
C
ASN
70
-150.26
-26.48
4
A
LYS
136
65.85
91.96
4
A
ASN
141
-136.48
-63.88
4
B
ASP
1
-156.99
-86.92
4
B
PHE
60
-166.54
-41.09
4
C
ASP
1
-68.15
-90.29
4
C
PHE
60
-168.72
-62.63
4
C
ALA
66
-152.40
28.72
4
C
SER
71
-108.87
47.49
5
A
SER
112
-101.10
-61.36
5
A
LYS
122
35.29
69.33
5
A
LYS
136
60.84
100.52
5
A
ASN
141
-134.61
-74.52
5
B
ASP
1
-54.04
94.37
5
B
SER
2
-106.31
69.17
5
B
GLU
24
-89.31
30.01
5
B
SER
58
-86.94
40.42
5
B
GLU
59
54.51
82.51
5
B
GLN
63
-69.30
93.62
5
B
ALA
66
57.33
19.26
5
C
VAL
0
-106.65
49.27
5
C
LYS
57
-160.03
22.12
5
C
SER
58
-85.52
44.87
5
C
GLU
59
57.21
71.71
5
C
HIS
64
-115.78
73.51
6
A
LYS
136
65.10
93.01
6
A
ASN
141
-131.70
-71.32
6
A
SER
142
58.16
17.75
6
B
VAL
0
-117.01
-168.15
6
B
ASP
1
-159.92
-81.45
6
B
SER
2
-161.59
26.36
6
B
LEU
69
72.26
-85.10
6
C
VAL
0
-110.66
-164.99
6
C
ASP
1
-156.76
-72.43
6
C
SER
2
-165.12
16.35
6
C
LEU
69
63.53
-87.02
7
A
LYS
136
67.58
88.46
7
A
ASN
141
-134.97
-66.35
7
B
VAL
0
-123.47
-165.87
7
B
ASP
1
-161.34
-80.93
7
B
SER
2
-163.48
7.08
7
B
LEU
69
66.22
-87.06
7
C
VAL
0
-121.90
-166.91
7
C
ASP
1
-151.66
-79.70
7
C
SER
2
-158.89
1.40
7
C
LEU
69
72.35
-65.31
7
C
ASN
70
-162.25
-29.59
8
A
LYS
136
64.70
96.10
8
A
ASN
141
-128.26
-74.14
8
A
SER
142
58.58
9.89
8
B
VAL
0
-117.96
-151.98
8
B
ASP
1
-174.81
-75.90
8
B
SER
2
-147.29
13.00
8
B
LEU
69
73.71
-57.46
8
B
ASN
70
-171.75
-22.52
8
C
VAL
0
-122.08
-168.21
8
C
ASP
1
-157.79
-71.20
8
C
SER
2
-160.24
-42.04
8
C
LEU
69
62.48
-94.34
9
A
LYS
122
33.88
65.30
9
A
LYS
136
64.41
91.55
9
A
ASN
141
-121.76
-73.08
9
A
SER
142
59.78
8.52
9
B
ASP
1
43.42
78.72
9
B
GLU
24
-82.94
35.16
9
B
LYS
57
-158.33
23.27
9
B
SER
58
-90.10
32.88
9
B
GLU
59
64.44
104.78
9
B
GLN
63
-68.60
87.58
9
B
ALA
66
58.45
16.70
9
C
VAL
0
-91.72
37.06
9
C
ASP
1
-68.82
96.29
9
C
ALA
50
-66.10
8.26
9
C
VAL
51
-34.67
-38.61
9
C
LEU
55
-83.40
-75.38
9
C
LYS
57
-150.44
22.46
9
C
SER
58
-81.12
42.36
9
C
GLU
59
65.10
107.77
9
C
ASN
70
-89.37
42.49
10
A
LYS
122
38.68
60.98
10
A
LYS
136
65.89
90.57
10
A
ASN
141
-122.69
-83.65
10
B
ASP
1
-58.82
102.55
10
B
LYS
57
-156.94
29.94
10
B
SER
58
-93.03
30.48
10
B
GLU
59
60.94
75.08
10
B
ALA
66
58.41
18.69
10
C
VAL
0
-85.22
39.42
10
C
SER
2
-96.70
48.56
10
C
ILE
54
-91.69
-65.38
10
C
GLU
59
60.20
88.15
10
C
ALA
66
59.12
13.73
Solution structure of the complex between the Sgt2 homodimerization domain and the Get5 UBL domain
1
N
N
2
N
N
2
N
N
A
THR
97
A
THR
25
HELX_P
A
GLU
108
A
GLU
36
1
1
12
A
HIS
113
A
HIS
41
HELX_P
A
SER
115
A
SER
43
5
2
3
A
PHE
131
A
PHE
59
HELX_P
A
LYS
136
A
LYS
64
1
3
6
B
SER
4
B
SER
6
HELX_P
B
LYS
22
B
LYS
24
1
4
19
B
SER
26
B
SER
28
HELX_P
B
PHE
44
B
PHE
46
1
5
19
B
GLU
47
B
GLU
49
HELX_P
B
GLU
49
B
GLU
51
5
6
3
B
ALA
50
B
ALA
52
HELX_P
B
LEU
55
B
LEU
57
1
7
6
C
SER
4
C
SER
6
HELX_P
C
LYS
22
C
LYS
24
1
8
19
C
SER
26
C
SER
28
HELX_P
C
GLY
45
C
GLY
47
1
9
20
C
GLU
47
C
GLU
49
HELX_P
C
GLU
49
C
GLU
51
5
10
3
C
ALA
50
C
ALA
52
HELX_P
C
LEU
55
C
LEU
57
1
11
6
PROTEIN BINDING/PROTEIN BINDING
ubiquitin-like domain, protein-protein interaction, four-helix bundle, GET pathway, PROTEIN BINDING-PROTEIN BINDING complex
A
ALA
83
A
ALA
11
1
A
PRO
84
A
PRO
12
-1.35
A
ALA
83
A
ALA
11
2
A
PRO
84
A
PRO
12
-1.31
A
ALA
83
A
ALA
11
3
A
PRO
84
A
PRO
12
-1.11
A
ALA
83
A
ALA
11
4
A
PRO
84
A
PRO
12
-1.64
A
ALA
83
A
ALA
11
5
A
PRO
84
A
PRO
12
-1.25
A
ALA
83
A
ALA
11
6
A
PRO
84
A
PRO
12
-1.66
A
ALA
83
A
ALA
11
7
A
PRO
84
A
PRO
12
-1.77
A
ALA
83
A
ALA
11
8
A
PRO
84
A
PRO
12
-1.40
A
ALA
83
A
ALA
11
9
A
PRO
84
A
PRO
12
-1.47
A
ALA
83
A
ALA
11
10
A
PRO
84
A
PRO
12
-0.74
MDY2_YEAST
UNP
1
74
Q12285
VHLTLKKIQAPKFSIEHDFSPSDTILQIKQHLISEEKASHISEIKLLLKGKVLHDNLFLSDLKVTPANSTITVMIKPN
SGT2_YEAST
UNP
2
2
Q12118
SASKEEIAALIVNYFSSIVEKKEISEDGADSLNVAMDCISEAFGFEREAVSGILGKSEFKGQHLADILNSA
74
151
2LXC
74
151
Q12285
A
1
2
79
2
72
2LXC
2
72
Q12118
B
2
4
74
2
72
2LXC
2
72
Q12118
C
2
4
74
1
initiating methionine
MET
73
2LXC
A
Q12285
UNP
1
1
expression tag
LEU
152
2LXC
A
Q12285
UNP
80
1
expression tag
GLU
153
2LXC
A
Q12285
UNP
81
2
expression tag
SER
-1
2LXC
B
Q12118
UNP
1
2
expression tag
VAL
0
2LXC
B
Q12118
UNP
2
2
expression tag
ASP
1
2LXC
B
Q12118
UNP
3
3
expression tag
SER
-1
2LXC
C
Q12118
UNP
1
3
expression tag
VAL
0
2LXC
C
Q12118
UNP
2
3
expression tag
ASP
1
2LXC
C
Q12118
UNP
3
5
anti-parallel
parallel
anti-parallel
anti-parallel
A
PHE
86
A
PHE
14
A
PHE
92
A
PHE
20
A
VAL
74
A
VAL
2
A
LYS
80
A
LYS
8
A
THR
143
A
THR
71
A
ILE
148
A
ILE
76
A
ILE
117
A
ILE
45
A
LEU
121
A
LEU
49
A
LYS
124
A
LYS
52
A
VAL
125
A
VAL
53