1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Serrano, P. Geralt, M. Dutta, S.K. Wuthrich, K. Joint Center for Structural Genomics (JCSG) Partnership for T-Cell Biology (TCELL) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 NMR structure of the N-terminal RNA Binding domain 1 (RRM1) of the protein RBM10 from Homo sapiens 10.2210/pdb2lxi/pdb pdb_00002lxi 10479.848 RNA-binding protein 10 RRM 1 domain residues 128-218 1 man polymer G patch domain-containing protein 9, RNA-binding motif protein 10, RNA-binding protein S1-1, S1-1 no no SNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYS DPKPKINEDWL SNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYS DPKPKINEDWL A JCSG-421711 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample RBM10, DXS8237E, GPATC9, GPATCH9, KIAA0122 9606 Homo sapiens 562 Escherichia coli pSpeedET Joint Center for Structural Genomics JCSG PSI:Biology Partnership for T-Cell Biology TCELL PSI:Biology database_2 pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer repository Initial release Structure summary Data collection Database references Other 1 0 2012-10-10 1 1 2013-06-12 1 2 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model Y BMRB Y RCSB 2012-08-27 REL REL REL REL target function 80 19 2D 1H-15N HSQC 3D 1H-13C NOESY aliphatic 3D 1H-13C NOESY aromatic 3D 1H-15N NOESY APSY 4D-HACANH APSY 5D-CBCACONH APSY 5D-HACACONH 1.2 mM [U-98% 13C; U-98% 15N] 50 mM 20 mM 5 mM 0.220 6.5 ambient 298 K molecular dynamics 1 lowest energy 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide, 95% H2O/5% D2O 95% H2O/5% D2O Guntert P. refinement CYANA LUGINB, H.L., WUTHRICH, K. refinement OPALp 600 Bruker AVANCE Bruker Avance 800 Bruker AVANCE Bruker Avance SER 1 n 1 SER 1 A ASN 2 n 2 ASN 2 A ILE 3 n 3 ILE 3 A VAL 4 n 4 VAL 4 A MET 5 n 5 MET 5 A LEU 6 n 6 LEU 6 A ARG 7 n 7 ARG 7 A MET 8 n 8 MET 8 A LEU 9 n 9 LEU 9 A PRO 10 n 10 PRO 10 A GLN 11 n 11 GLN 11 A ALA 12 n 12 ALA 12 A ALA 13 n 13 ALA 13 A THR 14 n 14 THR 14 A GLU 15 n 15 GLU 15 A ASP 16 n 16 ASP 16 A ASP 17 n 17 ASP 17 A ILE 18 n 18 ILE 18 A ARG 19 n 19 ARG 19 A GLY 20 n 20 GLY 20 A GLN 21 n 21 GLN 21 A LEU 22 n 22 LEU 22 A GLN 23 n 23 GLN 23 A SER 24 n 24 SER 24 A HIS 25 n 25 HIS 25 A GLY 26 n 26 GLY 26 A VAL 27 n 27 VAL 27 A GLN 28 n 28 GLN 28 A ALA 29 n 29 ALA 29 A ARG 30 n 30 ARG 30 A GLU 31 n 31 GLU 31 A VAL 32 n 32 VAL 32 A ARG 33 n 33 ARG 33 A LEU 34 n 34 LEU 34 A MET 35 n 35 MET 35 A ARG 36 n 36 ARG 36 A ASN 37 n 37 ASN 37 A LYS 38 n 38 LYS 38 A SER 39 n 39 SER 39 A SER 40 n 40 SER 40 A GLY 41 n 41 GLY 41 A GLN 42 n 42 GLN 42 A SER 43 n 43 SER 43 A ARG 44 n 44 ARG 44 A GLY 45 n 45 GLY 45 A PHE 46 n 46 PHE 46 A ALA 47 n 47 ALA 47 A PHE 48 n 48 PHE 48 A VAL 49 n 49 VAL 49 A GLU 50 n 50 GLU 50 A PHE 51 n 51 PHE 51 A SER 52 n 52 SER 52 A HIS 53 n 53 HIS 53 A LEU 54 n 54 LEU 54 A GLN 55 n 55 GLN 55 A ASP 56 n 56 ASP 56 A ALA 57 n 57 ALA 57 A THR 58 n 58 THR 58 A ARG 59 n 59 ARG 59 A TRP 60 n 60 TRP 60 A MET 61 n 61 MET 61 A GLU 62 n 62 GLU 62 A ALA 63 n 63 ALA 63 A ASN 64 n 64 ASN 64 A GLN 65 n 65 GLN 65 A HIS 66 n 66 HIS 66 A SER 67 n 67 SER 67 A LEU 68 n 68 LEU 68 A ASN 69 n 69 ASN 69 A ILE 70 n 70 ILE 70 A LEU 71 n 71 LEU 71 A GLY 72 n 72 GLY 72 A GLN 73 n 73 GLN 73 A LYS 74 n 74 LYS 74 A VAL 75 n 75 VAL 75 A SER 76 n 76 SER 76 A MET 77 n 77 MET 77 A HIS 78 n 78 HIS 78 A TYR 79 n 79 TYR 79 A SER 80 n 80 SER 80 A ASP 81 n 81 ASP 81 A PRO 82 n 82 PRO 82 A LYS 83 n 83 LYS 83 A PRO 84 n 84 PRO 84 A LYS 85 n 85 LYS 85 A ILE 86 n 86 ILE 86 A ASN 87 n 87 ASN 87 A GLU 88 n 88 GLU 88 A ASP 89 n 89 ASP 89 A TRP 90 n 90 TRP 90 A LEU 91 n 91 LEU 91 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 49 A O VAL 49 A N VAL 4 A N VAL 4 A N MET 5 A N MET 5 A O HIS 78 A O HIS 78 A O VAL 75 A O VAL 75 A N LEU 68 A N LEU 68 1 A A ASN LYS 37 38 -144.83 2 A A GLN ALA 28 29 -142.80 5 A A VAL GLN 27 28 -149.13 8 A A GLN ALA 28 29 -146.03 9 A A GLN ALA 28 29 -143.21 12 A A GLN ALA 28 29 149.71 15 A A ALA PHE 47 48 145.19 17 A A GLN ALA 28 29 -148.31 17 A A ASN LYS 37 38 -141.09 19 A A ASP PRO 81 82 -149.17 1 A ARG 30 0.093 SIDE CHAIN 3 A ARG 36 0.084 SIDE CHAIN 6 A ARG 30 0.134 SIDE CHAIN 7 A ARG 30 0.095 SIDE CHAIN 9 A ARG 19 0.138 SIDE CHAIN 9 A TYR 79 0.101 SIDE CHAIN 10 A ARG 30 0.082 SIDE CHAIN 15 A TYR 79 0.124 SIDE CHAIN 16 A ARG 44 0.113 SIDE CHAIN 6 -3.57 0.50 120.30 116.73 A A A NE CZ NH2 ARG ARG ARG 59 59 59 N 7 10.36 1.50 110.90 121.26 A A A CA CB CG1 VAL VAL VAL 49 49 49 N 9 -3.19 0.50 120.30 117.11 A A A NE CZ NH2 ARG ARG ARG 36 36 36 N 9 -4.34 0.60 121.00 116.66 A A A CB CG CD2 TYR TYR TYR 79 79 79 N 12 11.74 1.70 113.30 125.04 A A A CA CB CG MET MET MET 35 35 35 N 15 -10.85 1.60 129.70 118.85 A A A CB CG CD2 HIS HIS HIS 25 25 25 N 19 -4.98 0.60 121.00 116.02 A A A CB CG CD2 TYR TYR TYR 79 79 79 N 1 A MET 35 43.87 -154.51 1 A ARG 36 75.71 -48.44 1 A LYS 38 47.05 -66.50 1 A GLN 42 -65.47 4.00 1 A SER 43 -110.21 72.13 1 A ASP 89 -144.56 11.61 2 A ASN 2 -143.00 13.36 2 A VAL 4 -118.18 72.21 2 A ALA 29 50.50 173.26 2 A MET 35 -54.32 87.54 2 A ARG 36 -140.53 -74.28 2 A ASN 37 -64.24 94.37 2 A ARG 44 -153.53 0.21 2 A MET 61 -52.57 -70.45 2 A LEU 71 64.95 -15.55 2 A LYS 83 58.10 164.95 2 A GLU 88 44.80 71.17 3 A ASN 2 76.34 -2.51 3 A MET 8 67.48 62.56 3 A ALA 29 43.55 86.80 3 A LEU 34 -140.53 -152.82 3 A MET 35 69.49 -153.39 3 A ASN 37 -153.24 -50.68 3 A LYS 38 64.08 -24.16 3 A SER 39 -76.53 -74.96 3 A GLN 42 -62.98 4.33 3 A ARG 44 -142.72 14.98 3 A SER 80 -144.18 53.34 4 A VAL 32 -170.12 137.78 4 A ASN 37 -160.45 106.02 4 A LYS 38 -67.37 1.60 4 A SER 40 -131.13 -40.36 4 A SER 43 67.05 -152.81 4 A ARG 44 75.37 -3.14 4 A SER 80 -146.90 -159.19 4 A LYS 83 54.32 155.15 5 A ALA 29 45.22 92.21 5 A MET 35 -46.18 77.17 5 A ARG 36 -131.18 -67.04 5 A GLN 42 -69.58 14.45 5 A ARG 44 -151.53 13.34 5 A LYS 83 60.99 163.35 6 A ARG 36 173.87 -56.79 6 A LYS 38 44.39 -66.82 6 A GLN 42 -64.69 14.28 6 A LEU 71 56.18 17.18 6 A ASP 81 -49.87 154.73 6 A LYS 83 55.77 165.79 6 A ASN 87 -56.49 -162.02 7 A MET 35 -55.25 16.96 7 A SER 40 -163.30 -25.26 7 A ARG 44 -148.46 -5.09 7 A LYS 83 54.13 165.84 8 A ALA 29 47.07 119.38 8 A LEU 34 -64.43 -153.63 8 A MET 35 -94.49 -70.51 8 A SER 43 77.64 97.01 8 A HIS 66 53.53 15.78 9 A MET 8 74.72 53.38 9 A ALA 29 61.56 122.44 9 A MET 35 -59.40 14.58 9 A ASN 37 -162.58 -47.01 9 A LYS 38 51.08 7.35 9 A SER 43 174.76 141.25 9 A ARG 44 173.86 0.37 9 A LEU 54 65.23 -32.49 9 A HIS 66 57.24 16.00 9 A ASN 87 -58.24 -176.25 10 A ALA 29 44.60 94.44 10 A ARG 44 -130.66 -71.36 10 A LEU 54 -58.78 -9.41 10 A LYS 83 59.11 166.17 11 A ASN 2 -144.90 26.72 11 A ALA 29 63.53 110.79 11 A LEU 34 -129.71 -154.48 11 A MET 35 -68.94 69.25 11 A ARG 36 -143.63 -35.12 11 A LYS 38 47.06 -7.74 11 A ARG 44 -153.52 9.69 11 A LYS 83 54.27 163.91 12 A LEU 34 -111.50 -153.09 12 A MET 35 55.13 -176.49 12 A ASN 37 -161.12 98.03 12 A SER 43 75.33 88.45 12 A ASN 87 -64.68 -154.38 13 A ALA 29 55.46 99.75 13 A LEU 34 -71.70 -154.17 13 A ARG 36 68.84 -5.04 13 A LYS 38 47.29 -15.79 13 A SER 40 -146.92 -7.45 13 A GLN 42 -60.27 -173.30 13 A SER 43 77.03 137.31 13 A ARG 44 -167.98 15.98 13 A LYS 83 54.79 164.47 14 A MET 8 75.67 38.70 14 A ALA 29 43.49 94.60 14 A ASN 37 -166.45 87.12 14 A SER 40 -152.64 -14.19 14 A SER 43 178.49 145.15 14 A ARG 44 174.88 -42.50 14 A HIS 66 58.68 13.17 14 A TYR 79 -66.21 92.11 15 A ASN 2 -151.53 12.85 15 A ALA 29 43.54 74.83 15 A ARG 36 66.02 135.78 15 A ASN 37 -165.97 -42.76 15 A LYS 38 55.42 -20.36 15 A ARG 44 174.73 -35.01 15 A SER 80 -67.59 77.59 15 A LYS 83 54.43 165.95 16 A MET 8 75.34 45.45 16 A ARG 33 -156.40 83.71 16 A LEU 34 -131.71 -153.39 16 A MET 35 57.05 -86.50 16 A ARG 36 172.90 155.62 16 A ASN 37 -164.84 -2.20 16 A LYS 38 45.18 -13.39 16 A GLN 42 -65.63 8.15 16 A LEU 71 57.50 14.61 16 A SER 80 -101.26 50.27 16 A LYS 85 -106.97 44.30 17 A PRO 10 -68.04 -178.81 17 A ALA 29 45.15 104.13 17 A MET 35 -169.11 -87.05 17 A ARG 36 -153.92 -55.58 17 A ASN 37 59.71 -33.08 17 A LYS 38 46.22 -70.40 17 A GLN 42 -78.73 29.80 17 A SER 43 -163.76 9.71 17 A SER 80 -90.96 51.63 17 A LYS 83 54.56 155.77 17 A PRO 84 -59.49 -162.16 18 A ASN 2 -171.07 -22.82 18 A MET 8 72.31 59.52 18 A MET 35 -49.26 178.68 18 A ARG 36 77.18 -12.67 18 A LYS 38 65.11 -48.26 18 A GLN 42 -59.04 -162.76 18 A SER 43 75.95 50.16 18 A SER 80 -153.82 46.33 18 A LYS 83 56.91 165.56 18 A PRO 84 -67.31 98.89 18 A TRP 90 -142.77 10.32 19 A ASN 2 72.96 -1.46 19 A ALA 29 44.21 90.97 19 A MET 35 -58.58 13.16 19 A ASN 37 -177.11 118.56 19 A SER 40 -130.65 -38.68 19 A GLN 42 -44.61 105.76 19 A ARG 44 174.34 2.54 19 A LEU 54 63.01 -27.73 19 A LEU 71 68.21 -13.80 19 A SER 80 -97.01 46.84 19 A LYS 83 54.24 165.51 lowest energy, model 1 NMR structure of the N-terminal RNA Binding domain 1 (RRM1) of the protein RBM10 from Homo sapiens 1 N N A THR 14 A THR 14 HELX_P A GLY 26 A GLY 26 1 1 13 A HIS 53 A HIS 53 HELX_P A ALA 63 A ALA 63 1 2 11 RNA BINDING PROTEIN RNA binding, RNA BINDING PROTEIN, Structural Genomics, PSI-Biology, Joint Center for Structural Genomics, JCSG, Partnership for T-Cell Biology, TCELL RBM10_HUMAN UNP 1 128 P98175 SNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYS DPKPKINEDWL 128 218 2LXI 1 91 P98175 A 1 1 91 4 anti-parallel anti-parallel anti-parallel A PHE 46 A PHE 46 A GLU 50 A GLU 50 A ILE 3 A ILE 3 A ARG 7 A ARG 7 A GLN 73 A GLN 73 A HIS 78 A HIS 78 A SER 67 A SER 67 A ILE 70 A ILE 70 1 P 1