1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Vlach, J.
Saad, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C22 H42 N O10 P
511.543
n
O-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
L-peptide linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
110
3525
3530
10.1073/pnas.1216655110
23401539
Trio engagement via plasma membrane phospholipids and the myristoyl moiety governs HIV-1 matrix binding to bilayers.
2013
15563.497
Matrix protein p17
1
man
polymer
511.543
O-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
1
syn
non-polymer
MA, Gag-Pol polyprotein
no
no
GARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNT
IAVLYCVHQRIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQVSQNYHHHHHH
GARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNT
IAVLYCVHQRIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQVSQNYHHHHHH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
NEW YORK-5 ISOLATE
sample
gag-pol
11698
Human immunodeficiency virus type 1
562
Escherichia coli
pET21
repository
Initial release
Database references
Database references
1
0
2013-02-13
1
1
2013-03-06
1
2
2013-04-03
BMRB
Y
RCSB
2012-09-14
REL
REL
REL
8SP
O-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
structures with the lowest energy
100
20
3D 13C-edited/13C-filtered NOESY
3D HCCH-TOCSY
2D 1H-13C HSQC
3D HNCA
3D HN(CO)CA
3D HNCACB
3D CBCA(CO)NH
3D 1H-15N TOCSY
3D 1H-15N NOESY
3D 1H-13C NOESY
2D 1H-15N HSQC
0.4
mM
[U-95% 13C]
0.8-1.0
mM
50
mM
2
mM
0.4-1.0
mM
[U-95% 13C; U-95% 15N]
0.8-1.0
mM
50
mM
2
mM
50
5.5
ambient
308
K
simulated annealing, torsion angle dynamics
1
lowest energy
0.4 mM [U-95% 13C] MA, 0.8-1.0 mM 1,2-dioctanoyl-sn-glycero-3-phospho-L-serine, sodium salt, 50 mM sodium phosphate, 2 mM DTT, 90% H2O/10% D2O
90% H2O/10% D2O
0.4-1.0 mM [U-95% 13C; U-95% 15N] MA, 0.8-1.0 mM 1,2-dioctanoyl-sn-glycero-3-phospho-L-serine, sodium salt, 50 mM sodium phosphate, 2 mM DTT, 90% H2O/10% D2O
90% H2O/10% D2O
Guntert, Mumenthaler and Wuthrich
structure solution
CYANA
2.1
Bruker Biospin
collection
TOPSPIN
Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
processing
NMRPipe
CCPN
data analysis
CCPN_Analysis
Guntert, Mumenthaler and Wuthrich
refinement
CYANA
2.1
700
Bruker
Avance II
Bruker Avance II
8SP
300
2
8SP
8SP
300
A
GLY
2
n
1
GLY
2
A
ALA
3
n
2
ALA
3
A
ARG
4
n
3
ARG
4
A
ALA
5
n
4
ALA
5
A
SER
6
n
5
SER
6
A
VAL
7
n
6
VAL
7
A
LEU
8
n
7
LEU
8
A
SER
9
n
8
SER
9
A
GLY
10
n
9
GLY
10
A
GLY
11
n
10
GLY
11
A
GLU
12
n
11
GLU
12
A
LEU
13
n
12
LEU
13
A
ASP
14
n
13
ASP
14
A
LYS
15
n
14
LYS
15
A
TRP
16
n
15
TRP
16
A
GLU
17
n
16
GLU
17
A
LYS
18
n
17
LYS
18
A
ILE
19
n
18
ILE
19
A
ARG
20
n
19
ARG
20
A
LEU
21
n
20
LEU
21
A
ARG
22
n
21
ARG
22
A
PRO
23
n
22
PRO
23
A
GLY
24
n
23
GLY
24
A
GLY
25
n
24
GLY
25
A
LYS
26
n
25
LYS
26
A
LYS
27
n
26
LYS
27
A
GLN
28
n
27
GLN
28
A
TYR
29
n
28
TYR
29
A
LYS
30
n
29
LYS
30
A
LEU
31
n
30
LEU
31
A
LYS
32
n
31
LYS
32
A
HIS
33
n
32
HIS
33
A
ILE
34
n
33
ILE
34
A
VAL
35
n
34
VAL
35
A
TRP
36
n
35
TRP
36
A
ALA
37
n
36
ALA
37
A
SER
38
n
37
SER
38
A
ARG
39
n
38
ARG
39
A
GLU
40
n
39
GLU
40
A
LEU
41
n
40
LEU
41
A
GLU
42
n
41
GLU
42
A
ARG
43
n
42
ARG
43
A
PHE
44
n
43
PHE
44
A
ALA
45
n
44
ALA
45
A
VAL
46
n
45
VAL
46
A
ASN
47
n
46
ASN
47
A
PRO
48
n
47
PRO
48
A
GLY
49
n
48
GLY
49
A
LEU
50
n
49
LEU
50
A
LEU
51
n
50
LEU
51
A
GLU
52
n
51
GLU
52
A
THR
53
n
52
THR
53
A
SER
54
n
53
SER
54
A
GLU
55
n
54
GLU
55
A
GLY
56
n
55
GLY
56
A
CYS
57
n
56
CYS
57
A
ARG
58
n
57
ARG
58
A
GLN
59
n
58
GLN
59
A
ILE
60
n
59
ILE
60
A
LEU
61
n
60
LEU
61
A
GLY
62
n
61
GLY
62
A
GLN
63
n
62
GLN
63
A
LEU
64
n
63
LEU
64
A
GLN
65
n
64
GLN
65
A
PRO
66
n
65
PRO
66
A
SER
67
n
66
SER
67
A
LEU
68
n
67
LEU
68
A
GLN
69
n
68
GLN
69
A
THR
70
n
69
THR
70
A
GLY
71
n
70
GLY
71
A
SER
72
n
71
SER
72
A
GLU
73
n
72
GLU
73
A
GLU
74
n
73
GLU
74
A
LEU
75
n
74
LEU
75
A
ARG
76
n
75
ARG
76
A
SER
77
n
76
SER
77
A
LEU
78
n
77
LEU
78
A
TYR
79
n
78
TYR
79
A
ASN
80
n
79
ASN
80
A
THR
81
n
80
THR
81
A
ILE
82
n
81
ILE
82
A
ALA
83
n
82
ALA
83
A
VAL
84
n
83
VAL
84
A
LEU
85
n
84
LEU
85
A
TYR
86
n
85
TYR
86
A
CYS
87
n
86
CYS
87
A
VAL
88
n
87
VAL
88
A
HIS
89
n
88
HIS
89
A
GLN
90
n
89
GLN
90
A
ARG
91
n
90
ARG
91
A
ILE
92
n
91
ILE
92
A
ASP
93
n
92
ASP
93
A
VAL
94
n
93
VAL
94
A
LYS
95
n
94
LYS
95
A
ASP
96
n
95
ASP
96
A
THR
97
n
96
THR
97
A
LYS
98
n
97
LYS
98
A
GLU
99
n
98
GLU
99
A
ALA
100
n
99
ALA
100
A
LEU
101
n
100
LEU
101
A
ASP
102
n
101
ASP
102
A
LYS
103
n
102
LYS
103
A
ILE
104
n
103
ILE
104
A
GLU
105
n
104
GLU
105
A
GLU
106
n
105
GLU
106
A
GLU
107
n
106
GLU
107
A
GLN
108
n
107
GLN
108
A
ASN
109
n
108
ASN
109
A
LYS
110
n
109
LYS
110
A
SER
111
n
110
SER
111
A
LYS
112
n
111
LYS
112
A
LYS
113
n
112
LYS
113
A
LYS
114
n
113
LYS
114
A
ALA
115
n
114
ALA
115
A
GLN
116
n
115
GLN
116
A
GLN
117
n
116
GLN
117
A
ALA
118
n
117
ALA
118
A
ALA
119
n
118
ALA
119
A
ALA
120
n
119
ALA
120
A
ASP
121
n
120
ASP
121
A
THR
122
n
121
THR
122
A
GLY
123
n
122
GLY
123
A
ASN
124
n
123
ASN
124
A
ASN
125
n
124
ASN
125
A
SER
126
n
125
SER
126
A
GLN
127
n
126
GLN
127
A
VAL
128
n
127
VAL
128
A
SER
129
n
128
SER
129
A
GLN
130
n
129
GLN
130
A
ASN
131
n
130
ASN
131
A
TYR
132
n
131
TYR
132
A
n
132
133
A
n
133
134
A
n
134
135
A
n
135
136
A
n
136
137
A
n
137
138
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
HIS
133
A
HIS
132
1
Y
1
A
HIS
134
A
HIS
133
1
Y
1
A
HIS
135
A
HIS
134
1
Y
1
A
HIS
136
A
HIS
135
1
Y
1
A
HIS
137
A
HIS
136
1
Y
1
A
HIS
138
A
HIS
137
1
Y
2
A
HIS
133
A
HIS
132
1
Y
2
A
HIS
134
A
HIS
133
1
Y
2
A
HIS
135
A
HIS
134
1
Y
2
A
HIS
136
A
HIS
135
1
Y
2
A
HIS
137
A
HIS
136
1
Y
2
A
HIS
138
A
HIS
137
1
Y
3
A
HIS
133
A
HIS
132
1
Y
3
A
HIS
134
A
HIS
133
1
Y
3
A
HIS
135
A
HIS
134
1
Y
3
A
HIS
136
A
HIS
135
1
Y
3
A
HIS
137
A
HIS
136
1
Y
3
A
HIS
138
A
HIS
137
1
Y
4
A
HIS
133
A
HIS
132
1
Y
4
A
HIS
134
A
HIS
133
1
Y
4
A
HIS
135
A
HIS
134
1
Y
4
A
HIS
136
A
HIS
135
1
Y
4
A
HIS
137
A
HIS
136
1
Y
4
A
HIS
138
A
HIS
137
1
Y
5
A
HIS
133
A
HIS
132
1
Y
5
A
HIS
134
A
HIS
133
1
Y
5
A
HIS
135
A
HIS
134
1
Y
5
A
HIS
136
A
HIS
135
1
Y
5
A
HIS
137
A
HIS
136
1
Y
5
A
HIS
138
A
HIS
137
1
Y
6
A
HIS
133
A
HIS
132
1
Y
6
A
HIS
134
A
HIS
133
1
Y
6
A
HIS
135
A
HIS
134
1
Y
6
A
HIS
136
A
HIS
135
1
Y
6
A
HIS
137
A
HIS
136
1
Y
6
A
HIS
138
A
HIS
137
1
Y
7
A
HIS
133
A
HIS
132
1
Y
7
A
HIS
134
A
HIS
133
1
Y
7
A
HIS
135
A
HIS
134
1
Y
7
A
HIS
136
A
HIS
135
1
Y
7
A
HIS
137
A
HIS
136
1
Y
7
A
HIS
138
A
HIS
137
1
Y
8
A
HIS
133
A
HIS
132
1
Y
8
A
HIS
134
A
HIS
133
1
Y
8
A
HIS
135
A
HIS
134
1
Y
8
A
HIS
136
A
HIS
135
1
Y
8
A
HIS
137
A
HIS
136
1
Y
8
A
HIS
138
A
HIS
137
1
Y
9
A
HIS
133
A
HIS
132
1
Y
9
A
HIS
134
A
HIS
133
1
Y
9
A
HIS
135
A
HIS
134
1
Y
9
A
HIS
136
A
HIS
135
1
Y
9
A
HIS
137
A
HIS
136
1
Y
9
A
HIS
138
A
HIS
137
1
Y
10
A
HIS
133
A
HIS
132
1
Y
10
A
HIS
134
A
HIS
133
1
Y
10
A
HIS
135
A
HIS
134
1
Y
10
A
HIS
136
A
HIS
135
1
Y
10
A
HIS
137
A
HIS
136
1
Y
10
A
HIS
138
A
HIS
137
1
Y
11
A
HIS
133
A
HIS
132
1
Y
11
A
HIS
134
A
HIS
133
1
Y
11
A
HIS
135
A
HIS
134
1
Y
11
A
HIS
136
A
HIS
135
1
Y
11
A
HIS
137
A
HIS
136
1
Y
11
A
HIS
138
A
HIS
137
1
Y
12
A
HIS
133
A
HIS
132
1
Y
12
A
HIS
134
A
HIS
133
1
Y
12
A
HIS
135
A
HIS
134
1
Y
12
A
HIS
136
A
HIS
135
1
Y
12
A
HIS
137
A
HIS
136
1
Y
12
A
HIS
138
A
HIS
137
1
Y
13
A
HIS
133
A
HIS
132
1
Y
13
A
HIS
134
A
HIS
133
1
Y
13
A
HIS
135
A
HIS
134
1
Y
13
A
HIS
136
A
HIS
135
1
Y
13
A
HIS
137
A
HIS
136
1
Y
13
A
HIS
138
A
HIS
137
1
Y
14
A
HIS
133
A
HIS
132
1
Y
14
A
HIS
134
A
HIS
133
1
Y
14
A
HIS
135
A
HIS
134
1
Y
14
A
HIS
136
A
HIS
135
1
Y
14
A
HIS
137
A
HIS
136
1
Y
14
A
HIS
138
A
HIS
137
1
Y
15
A
HIS
133
A
HIS
132
1
Y
15
A
HIS
134
A
HIS
133
1
Y
15
A
HIS
135
A
HIS
134
1
Y
15
A
HIS
136
A
HIS
135
1
Y
15
A
HIS
137
A
HIS
136
1
Y
15
A
HIS
138
A
HIS
137
1
Y
16
A
HIS
133
A
HIS
132
1
Y
16
A
HIS
134
A
HIS
133
1
Y
16
A
HIS
135
A
HIS
134
1
Y
16
A
HIS
136
A
HIS
135
1
Y
16
A
HIS
137
A
HIS
136
1
Y
16
A
HIS
138
A
HIS
137
1
Y
17
A
HIS
133
A
HIS
132
1
Y
17
A
HIS
134
A
HIS
133
1
Y
17
A
HIS
135
A
HIS
134
1
Y
17
A
HIS
136
A
HIS
135
1
Y
17
A
HIS
137
A
HIS
136
1
Y
17
A
HIS
138
A
HIS
137
1
Y
18
A
HIS
133
A
HIS
132
1
Y
18
A
HIS
134
A
HIS
133
1
Y
18
A
HIS
135
A
HIS
134
1
Y
18
A
HIS
136
A
HIS
135
1
Y
18
A
HIS
137
A
HIS
136
1
Y
18
A
HIS
138
A
HIS
137
1
Y
19
A
HIS
133
A
HIS
132
1
Y
19
A
HIS
134
A
HIS
133
1
Y
19
A
HIS
135
A
HIS
134
1
Y
19
A
HIS
136
A
HIS
135
1
Y
19
A
HIS
137
A
HIS
136
1
Y
19
A
HIS
138
A
HIS
137
1
Y
20
A
HIS
133
A
HIS
132
1
Y
20
A
HIS
134
A
HIS
133
1
Y
20
A
HIS
135
A
HIS
134
1
Y
20
A
HIS
136
A
HIS
135
1
Y
20
A
HIS
137
A
HIS
136
1
Y
20
A
HIS
138
A
HIS
137
1
Y
1
A
SER
6
-162.11
98.58
1
A
LYS
114
-98.57
30.94
1
A
GLN
116
-101.31
-72.16
1
A
ALA
118
-169.44
-38.93
2
A
GLN
90
-101.77
-73.17
2
A
ARG
91
-179.24
-35.10
2
A
ASP
93
-114.57
55.17
2
A
ASP
121
-114.43
62.72
2
A
GLN
130
-171.84
-65.05
2
A
ASN
131
62.63
179.05
3
A
ALA
3
-155.75
-64.89
3
A
SER
9
-68.20
-173.26
3
A
GLN
90
-100.46
-72.87
3
A
ARG
91
-179.26
-35.76
3
A
ASP
93
-115.06
63.50
3
A
GLN
127
-171.52
78.93
4
A
ALA
3
-143.80
-45.34
4
A
GLN
90
-76.27
-72.85
4
A
ARG
91
-179.19
-35.18
4
A
ASP
93
-109.80
59.29
4
A
LYS
114
-171.87
38.43
4
A
GLN
117
-129.54
-56.21
4
A
ALA
119
-151.55
37.27
4
A
ALA
120
-132.75
-41.67
4
A
THR
122
62.84
171.50
4
A
ASN
124
-58.00
172.57
4
A
ASN
131
-161.44
72.45
5
A
ALA
5
-171.92
119.02
5
A
GLN
116
-146.74
35.29
5
A
ALA
119
-169.98
32.28
5
A
ALA
120
-146.63
29.01
5
A
ASP
121
-101.42
42.95
6
A
SER
6
59.44
-175.16
6
A
GLN
90
-78.73
-74.15
6
A
ARG
91
-179.28
-35.38
6
A
ASP
93
-110.44
53.68
6
A
GLN
116
-96.69
-72.00
6
A
ALA
118
-168.99
-43.02
6
A
THR
122
-113.74
73.15
6
A
ASN
125
62.48
168.09
6
A
VAL
128
-58.25
172.31
6
A
ASN
131
61.47
177.65
7
A
SER
9
-65.24
-172.35
7
A
GLN
90
-100.73
-72.88
7
A
ARG
91
-179.23
-35.30
7
A
ASP
93
-117.27
68.43
7
A
THR
122
51.40
-170.87
8
A
ALA
3
-56.18
176.77
8
A
SER
9
-66.45
-172.93
8
A
LYS
27
-59.68
107.81
8
A
GLN
90
-100.88
-73.17
8
A
ARG
91
-177.93
-35.64
8
A
ASP
93
-114.78
66.53
8
A
ALA
119
-94.53
55.08
8
A
ALA
120
-157.14
30.61
8
A
ASP
121
-121.60
-66.48
8
A
THR
122
51.33
-170.85
8
A
SER
129
-169.58
99.40
9
A
VAL
7
-104.54
-70.43
9
A
ALA
115
-150.55
-46.81
9
A
ALA
120
-169.18
-59.88
9
A
GLN
127
-151.88
36.66
9
A
ASN
131
-146.29
50.76
10
A
VAL
7
-107.93
-68.18
10
A
ALA
118
-177.49
-45.29
11
A
ALA
3
-131.54
-62.00
11
A
SER
6
-104.52
62.74
11
A
LYS
27
-56.80
104.62
11
A
ASP
121
-177.87
-38.61
11
A
THR
122
51.42
-170.89
12
A
VAL
7
-109.91
-69.29
12
A
GLU
74
-151.99
-42.03
12
A
GLN
90
-74.32
-70.53
12
A
ARG
91
-179.03
-35.46
12
A
ASP
93
-109.54
60.71
12
A
GLN
116
-167.96
31.13
12
A
ALA
119
-142.04
33.60
12
A
ASN
124
-158.94
-48.80
12
A
ASN
125
-176.22
-52.44
13
A
SER
6
61.95
-171.90
13
A
VAL
7
-102.06
-71.45
13
A
SER
9
-68.29
-174.94
13
A
LYS
18
-95.58
32.33
13
A
LYS
26
-142.84
40.33
13
A
GLN
116
-92.92
-72.02
13
A
ALA
118
-175.04
-37.62
13
A
THR
122
62.60
175.77
13
A
ASN
124
-171.87
142.77
14
A
VAL
7
-97.72
-63.83
14
A
SER
9
-64.63
-171.58
14
A
LYS
18
-95.71
32.54
14
A
ALA
115
-149.78
30.18
14
A
ALA
120
-108.92
40.79
14
A
ASP
121
-160.07
34.32
14
A
ASN
131
-53.88
170.69
15
A
ALA
3
-118.66
70.51
15
A
SER
9
-69.45
-171.42
15
A
THR
70
-97.13
30.80
15
A
LYS
114
-98.07
30.74
15
A
ALA
115
-170.18
37.31
15
A
ALA
119
-100.74
-168.18
15
A
ASN
131
57.46
-177.31
16
A
ALA
5
-170.21
147.39
16
A
LYS
18
-95.58
32.41
16
A
LYS
26
-141.76
48.46
16
A
GLN
90
-83.35
-74.64
16
A
ARG
91
-179.20
-35.14
16
A
ASP
93
-117.23
57.88
16
A
GLN
116
-158.12
41.79
16
A
THR
122
58.24
-177.08
16
A
ASN
131
-178.02
-176.94
17
A
ALA
3
57.53
95.01
17
A
SER
6
-56.61
173.48
17
A
SER
9
-68.79
-171.91
17
A
ALA
120
-169.45
31.72
17
A
ASP
121
-148.09
-50.84
17
A
THR
122
51.36
-170.80
17
A
ASN
131
-171.14
-49.77
18
A
VAL
7
-92.80
-69.77
18
A
GLN
90
-79.55
-74.80
18
A
ARG
91
-179.62
34.43
18
A
VAL
94
-57.74
-178.03
18
A
ALA
120
-154.76
25.70
18
A
ASN
125
-155.41
37.90
19
A
ARG
4
-57.40
176.38
19
A
ALA
5
-172.19
-171.12
19
A
SER
6
62.50
169.64
19
A
SER
9
-65.77
-171.33
19
A
ALA
119
-100.85
-168.17
19
A
SER
129
53.31
72.56
20
A
SER
6
63.04
175.37
20
A
SER
9
-65.29
-171.80
20
A
GLN
90
-101.18
-72.33
20
A
ARG
91
-179.26
-35.94
20
A
ASP
93
-116.86
58.51
20
A
VAL
94
-57.07
170.57
20
A
GLN
130
-167.39
101.52
Matrix protein p17
lowest energy, model 1
Structure of HIV-1 myr(-) matrix protein in complex with 1,2-dioctanoyl-sn-phosphatidyl-L-serine
1
N
N
2
N
N
A
SER
9
A
SER
8
HELX_P
A
ILE
19
A
ILE
18
1
1
11
A
LYS
30
A
LYS
29
HELX_P
A
PHE
44
A
PHE
43
1
2
15
A
ASN
47
A
ASN
46
HELX_P
A
THR
53
A
THR
52
5
3
7
A
GLU
55
A
GLU
54
HELX_P
A
GLN
65
A
GLN
64
1
4
11
A
SER
67
A
SER
66
HELX_P
A
GLY
71
A
GLY
70
5
5
5
A
SER
72
A
SER
71
HELX_P
A
GLN
90
A
GLN
89
1
6
19
A
ASP
96
A
ASP
95
HELX_P
A
SER
111
A
SER
110
1
7
16
VIRAL PROTEIN
Gag, matrix, plasma membrane, lipid, VIRAL PROTEIN
POL_HV1N5
UNP
1
2
P12497
GARASVLSGGELDKWEKIRLRPGGKKQYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNT
IAVLYCVHQRIDVKDTKEALDKIEEEQNKSKKKAQQAAADTGNNSQVSQNY
2
132
2LYB
2
132
P12497
A
1
1
131
1
EXPRESSION TAG
HIS
133
2LYB
A
P12497
UNP
132
1
EXPRESSION TAG
HIS
134
2LYB
A
P12497
UNP
133
1
EXPRESSION TAG
HIS
135
2LYB
A
P12497
UNP
134
1
EXPRESSION TAG
HIS
136
2LYB
A
P12497
UNP
135
1
EXPRESSION TAG
HIS
137
2LYB
A
P12497
UNP
136
1
EXPRESSION TAG
HIS
138
2LYB
A
P12497
UNP
137
BINDING SITE FOR RESIDUE 8SP A 300
Software
3
A
PHE
44
A
PHE
43
3
1_555
A
ILE
60
A
ILE
59
3
1_555
A
LEU
64
A
LEU
63
3
1_555