1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Wang, S. Huang, W. Yang, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE J.Biomol.Nmr JBNME9 0800 0925-2738 54 415 420 10.1007/s10858-012-9679-5 23129012 NMR structure note: repetitive domain of aciniform spidroin 1 from Nephila antipodiana 2012 10.2210/pdb2lyi/pdb pdb_00002lyi 17079.256 PROTEIN (entity) 1 man polymer no no MHHHHHHSGSLGDQLTSTLASALTKTNTLKAVSASKPSANVAVAIVTSGLKKALGALRINAGVSSQLTSAVSQAVANVRP GSSPAVYAKAIAAPSVQILVSSGSVNNNNAKQVASTLSENLVREMANTARRYRVNVPEASVQADVSLVTSMTSTFVISSQ TSVQMGG MHHHHHHSGSLGDQLTSTLASALTKTNTLKAVSASKPSANVAVAIVTSGLKKALGALRINAGVSSQLTSAVSQAVANVRP GSSPAVYAKAIAAPSVQILVSSGSVNNNNAKQVASTLSENLVREMANTARRYRVNVPEASVQADVSLVTSMTSTFVISSQ TSVQMGG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 171624 Nephila antipodiana 562 Escherichia coli pET-32a(+)(derived) vector database_2 pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer repository Initial release Data collection Database references Other 1 0 2013-01-16 1 1 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model BMRB Y PDBJ 2012-09-18 REL REL REL REL A SEQUENCE DATABASE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY EXIST. target function 100 10 1 2D 1H-15N HSQC 2D 1H-13C HSQC aliphatic 2D 1H-13C HSQC aromatic 3D HNCA 3D HN(CO)CA 3D HCCH-TOCSY 4D time shared 13C/15N-edited NOESY 2 mM [U-100% 13C; U-100% 15N] 0 6.0 ambient 298 K simulated annealing 1 fewest violations 2mM [U-100% 13C; U-100% 15N]AcSp1-RP-1, 95%H2O/5%D2O 95% H2O/5% D2O Guntert, Mumenthaler and Wuthrich structure solution CYANA 2.1 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRPipe Yu Zheng, Daiwen Yang chemical shift assignment NMRspy Bruker Biospin collection TopSpin refinement CYANA 800 Bruker AVANCE Bruker Avance MET -6 n 1 MET -6 A HIS -5 n 2 HIS -5 A HIS -4 n 3 HIS -4 A HIS -3 n 4 HIS -3 A HIS -2 n 5 HIS -2 A HIS -1 n 6 HIS -1 A HIS 0 n 7 HIS 0 A SER 1 n 8 SER 1 A GLY 2 n 9 GLY 2 A SER 3 n 10 SER 3 A LEU 4 n 11 LEU 4 A GLY 5 n 12 GLY 5 A ASP 6 n 13 ASP 6 A GLN 7 n 14 GLN 7 A LEU 8 n 15 LEU 8 A THR 9 n 16 THR 9 A SER 10 n 17 SER 10 A THR 11 n 18 THR 11 A LEU 12 n 19 LEU 12 A ALA 13 n 20 ALA 13 A SER 14 n 21 SER 14 A ALA 15 n 22 ALA 15 A LEU 16 n 23 LEU 16 A THR 17 n 24 THR 17 A LYS 18 n 25 LYS 18 A THR 19 n 26 THR 19 A ASN 20 n 27 ASN 20 A THR 21 n 28 THR 21 A LEU 22 n 29 LEU 22 A LYS 23 n 30 LYS 23 A ALA 24 n 31 ALA 24 A VAL 25 n 32 VAL 25 A SER 26 n 33 SER 26 A ALA 27 n 34 ALA 27 A SER 28 n 35 SER 28 A LYS 29 n 36 LYS 29 A PRO 30 n 37 PRO 30 A SER 31 n 38 SER 31 A ALA 32 n 39 ALA 32 A ASN 33 n 40 ASN 33 A VAL 34 n 41 VAL 34 A ALA 35 n 42 ALA 35 A VAL 36 n 43 VAL 36 A ALA 37 n 44 ALA 37 A ILE 38 n 45 ILE 38 A VAL 39 n 46 VAL 39 A THR 40 n 47 THR 40 A SER 41 n 48 SER 41 A GLY 42 n 49 GLY 42 A LEU 43 n 50 LEU 43 A LYS 44 n 51 LYS 44 A LYS 45 n 52 LYS 45 A ALA 46 n 53 ALA 46 A LEU 47 n 54 LEU 47 A GLY 48 n 55 GLY 48 A ALA 49 n 56 ALA 49 A LEU 50 n 57 LEU 50 A ARG 51 n 58 ARG 51 A ILE 52 n 59 ILE 52 A ASN 53 n 60 ASN 53 A ALA 54 n 61 ALA 54 A GLY 55 n 62 GLY 55 A VAL 56 n 63 VAL 56 A SER 57 n 64 SER 57 A SER 58 n 65 SER 58 A GLN 59 n 66 GLN 59 A LEU 60 n 67 LEU 60 A THR 61 n 68 THR 61 A SER 62 n 69 SER 62 A ALA 63 n 70 ALA 63 A VAL 64 n 71 VAL 64 A SER 65 n 72 SER 65 A GLN 66 n 73 GLN 66 A ALA 67 n 74 ALA 67 A VAL 68 n 75 VAL 68 A ALA 69 n 76 ALA 69 A ASN 70 n 77 ASN 70 A VAL 71 n 78 VAL 71 A ARG 72 n 79 ARG 72 A PRO 73 n 80 PRO 73 A GLY 74 n 81 GLY 74 A SER 75 n 82 SER 75 A SER 76 n 83 SER 76 A PRO 77 n 84 PRO 77 A ALA 78 n 85 ALA 78 A VAL 79 n 86 VAL 79 A TYR 80 n 87 TYR 80 A ALA 81 n 88 ALA 81 A LYS 82 n 89 LYS 82 A ALA 83 n 90 ALA 83 A ILE 84 n 91 ILE 84 A ALA 85 n 92 ALA 85 A ALA 86 n 93 ALA 86 A PRO 87 n 94 PRO 87 A SER 88 n 95 SER 88 A VAL 89 n 96 VAL 89 A GLN 90 n 97 GLN 90 A ILE 91 n 98 ILE 91 A LEU 92 n 99 LEU 92 A VAL 93 n 100 VAL 93 A SER 94 n 101 SER 94 A SER 95 n 102 SER 95 A GLY 96 n 103 GLY 96 A SER 97 n 104 SER 97 A VAL 98 n 105 VAL 98 A ASN 99 n 106 ASN 99 A ASN 100 n 107 ASN 100 A ASN 101 n 108 ASN 101 A ASN 102 n 109 ASN 102 A ALA 103 n 110 ALA 103 A LYS 104 n 111 LYS 104 A GLN 105 n 112 GLN 105 A VAL 106 n 113 VAL 106 A ALA 107 n 114 ALA 107 A SER 108 n 115 SER 108 A THR 109 n 116 THR 109 A LEU 110 n 117 LEU 110 A SER 111 n 118 SER 111 A GLU 112 n 119 GLU 112 A ASN 113 n 120 ASN 113 A LEU 114 n 121 LEU 114 A VAL 115 n 122 VAL 115 A ARG 116 n 123 ARG 116 A GLU 117 n 124 GLU 117 A MET 118 n 125 MET 118 A ALA 119 n 126 ALA 119 A ASN 120 n 127 ASN 120 A THR 121 n 128 THR 121 A ALA 122 n 129 ALA 122 A ARG 123 n 130 ARG 123 A ARG 124 n 131 ARG 124 A TYR 125 n 132 TYR 125 A ARG 126 n 133 ARG 126 A VAL 127 n 134 VAL 127 A ASN 128 n 135 ASN 128 A VAL 129 n 136 VAL 129 A PRO 130 n 137 PRO 130 A GLU 131 n 138 GLU 131 A ALA 132 n 139 ALA 132 A SER 133 n 140 SER 133 A VAL 134 n 141 VAL 134 A GLN 135 n 142 GLN 135 A ALA 136 n 143 ALA 136 A ASP 137 n 144 ASP 137 A VAL 138 n 145 VAL 138 A SER 139 n 146 SER 139 A LEU 140 n 147 LEU 140 A VAL 141 n 148 VAL 141 A THR 142 n 149 THR 142 A SER 143 n 150 SER 143 A MET 144 n 151 MET 144 A THR 145 n 152 THR 145 A SER 146 n 153 SER 146 A THR 147 n 154 THR 147 A PHE 148 n 155 PHE 148 A VAL 149 n 156 VAL 149 A ILE 150 n 157 ILE 150 A SER 151 n 158 SER 151 A SER 152 n 159 SER 152 A GLN 153 n 160 GLN 153 A THR 154 n 161 THR 154 A SER 155 n 162 SER 155 A VAL 156 n 163 VAL 156 A GLN 157 n 164 GLN 157 A MET 158 n 165 MET 158 A GLY 159 n 166 GLY 159 A GLY 160 n 167 GLY 160 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A HIS -2 -92.02 -73.22 1 A HIS -1 -177.36 126.76 1 A HIS 0 -177.69 -64.42 1 A PRO 30 -69.71 -89.09 1 A SER 31 176.22 152.77 1 A ARG 72 63.28 158.24 1 A ASN 101 -178.84 -32.17 1 A MET 158 62.86 74.59 2 A HIS -3 63.07 178.20 2 A HIS -1 -179.19 -179.35 2 A HIS 0 -139.29 -49.93 2 A SER 3 60.39 100.26 2 A PRO 30 -69.77 -91.15 2 A SER 31 173.52 160.05 2 A ARG 72 63.48 157.89 2 A ASN 101 -179.75 -32.25 2 A ARG 126 70.08 36.01 2 A ASN 128 59.62 99.57 2 A THR 147 -107.19 55.46 2 A GLN 153 62.65 -170.00 2 A MET 158 61.92 98.59 3 A HIS -5 -53.25 170.98 3 A HIS -4 -120.42 -74.73 3 A HIS -3 -177.55 133.68 3 A HIS -2 -178.91 94.07 3 A HIS 0 -63.33 -171.38 3 A SER 1 51.76 -169.63 3 A SER 3 52.20 90.27 3 A PRO 30 -69.73 -88.97 3 A SER 31 177.08 152.56 3 A ARG 72 62.59 160.58 3 A ASN 101 -174.73 -33.58 3 A VAL 127 -104.10 53.38 3 A THR 147 -110.30 51.23 3 A SER 151 179.39 -75.13 3 A GLN 153 -179.13 -69.54 3 A SER 155 -177.88 146.56 4 A HIS -5 -174.76 124.67 4 A HIS -4 -178.57 -40.55 4 A HIS -3 -62.91 -169.96 4 A HIS -2 62.88 93.14 4 A HIS 0 -172.90 -172.93 4 A SER 3 63.63 107.04 4 A PRO 30 -69.74 -91.04 4 A SER 31 173.94 159.64 4 A ARG 72 63.24 158.29 4 A ASN 101 -179.63 -33.26 4 A ASN 128 60.34 101.37 4 A THR 147 -110.45 53.10 4 A GLN 153 58.42 -173.62 4 A THR 154 -58.64 98.08 4 A MET 158 -153.86 34.52 5 A HIS -4 62.39 102.44 5 A HIS -2 -104.58 -60.98 5 A HIS -1 61.38 62.26 5 A HIS 0 -173.73 -66.03 5 A PRO 30 -69.80 -89.17 5 A SER 31 176.39 152.64 5 A ILE 52 -59.46 -80.85 5 A ASN 53 171.52 131.80 5 A ARG 72 63.33 157.72 5 A ASN 101 -174.80 -34.39 5 A ASN 128 59.99 100.97 5 A THR 147 -106.63 53.98 5 A GLN 153 63.08 179.05 5 A SER 155 -146.62 27.17 6 A HIS -5 -164.66 -56.87 6 A HIS -1 54.58 75.50 6 A HIS 0 -109.93 -74.68 6 A SER 3 63.34 105.66 6 A PRO 30 -69.71 -90.87 6 A SER 31 174.26 159.02 6 A ARG 72 63.38 157.89 6 A ASN 101 -170.52 -35.29 6 A ARG 126 70.20 37.81 6 A ASN 128 58.84 98.12 6 A THR 147 -108.56 52.24 6 A THR 154 62.50 88.29 6 A SER 155 -158.60 66.55 6 A GLN 157 -123.33 -73.98 7 A HIS -5 63.23 105.01 7 A HIS -3 62.86 104.06 7 A HIS -1 -166.52 -72.21 7 A SER 1 63.17 163.34 7 A PRO 30 -69.73 -88.81 7 A SER 31 177.66 152.41 7 A ARG 72 64.70 136.47 7 A ASN 101 -174.86 -32.81 7 A VAL 127 -106.45 52.88 7 A THR 147 -101.10 43.81 7 A SER 151 66.62 81.95 7 A GLN 153 61.65 100.56 7 A THR 154 64.00 106.91 7 A SER 155 -170.22 39.54 8 A HIS -3 -163.58 -59.99 8 A SER 1 -176.35 124.50 8 A PRO 30 -69.77 -90.58 8 A SER 31 174.41 159.73 8 A ARG 72 64.88 136.46 8 A ASN 101 -179.20 -32.14 8 A ASN 128 59.35 99.37 8 A GLN 153 63.62 160.02 8 A VAL 156 -152.80 44.70 9 A HIS -4 -179.02 52.07 9 A HIS -3 -150.01 -42.53 9 A HIS -1 -146.62 26.21 9 A HIS 0 -166.05 41.05 9 A PRO 30 -69.67 -89.24 9 A SER 31 176.60 152.30 9 A ARG 72 62.99 159.56 9 A ASN 101 -179.97 -32.16 9 A VAL 127 -118.31 63.96 9 A THR 147 -111.48 54.78 9 A SER 151 179.81 127.75 9 A GLN 153 -144.25 -57.28 9 A VAL 156 39.74 38.57 9 A GLN 157 -132.27 -72.85 10 A HIS -5 -144.60 46.15 10 A HIS -4 62.55 164.90 10 A SER 1 -175.27 -49.65 10 A SER 3 58.75 97.35 10 A PRO 30 -69.76 -91.03 10 A SER 31 174.21 159.46 10 A ARG 72 63.23 158.41 10 A ASN 99 -121.75 -169.63 10 A ASN 101 -178.08 -32.19 10 A VAL 127 -105.34 52.39 10 A SER 155 60.75 170.97 10 A VAL 156 63.14 104.47 10 A GLN 157 -174.56 133.40 fewest violations, model1 Repetitive domain (RP) of aciniform spidroin 1 from Nephila antipodiana 1 N N A SER 3 A SER 10 HELX_P A LYS 18 A LYS 25 1 1 16 A THR 19 A THR 26 HELX_P A LYS 29 A LYS 36 1 2 11 A SER 31 A SER 38 HELX_P A LEU 50 A LEU 57 1 3 20 A ASN 53 A ASN 60 HELX_P A ALA 69 A ALA 76 1 4 17 A SER 76 A SER 83 HELX_P A SER 95 A SER 102 1 5 20 A ASN 102 A ASN 109 HELX_P A ARG 124 A ARG 131 1 6 23 A PRO 130 A PRO 137 HELX_P A THR 147 A THR 154 1 7 18 STRUCTURAL PROTEIN PROTEIN, STRUCTURAL PROTEIN 2LYI PDB 1 2LYI -6 160 2LYI -6 160 2LYI A 1 1 167