1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Dutta, S.K.
Serrano, P.
Geralt, M.
Wuthrich, K.
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
NMR structure of the protein ZP_02034617.1 from Bacteroides capillosus ATCC 29799
10.2210/pdb2lz0/pdb
pdb_00002lz0
11087.371
Uncharacterized protein
UNP residues 379-478
1
man
polymer
no
no
GSHEGEPVVGMDKSLFAGNTVIREITVQPNIGLLYDGMFSGCTALEKLILTGEDPSAYSAGDGLRDGADFLICVPEEALD
RYRRDYFWQTYAAWIQPMEQ
GSHEGEPVVGMDKSLFAGNTVIREITVQPNIGLLYDGMFSGCTALEKLILTGEDPSAYSAGDGLRDGADFLICVPEEALD
RYRRDYFWQTYAAWIQPMEQ
A
JCSG-424100
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
29799
BACCAP_00201
411467
Bacteroides capillosus
469008
Escherichia coli
Bl21 De3
pSpeedET
Joint Center for Structural Genomics
JCSG
PSI:Biology
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
repository
Initial release
Structure summary
Database references
Structure summary
Data collection
Database references
Other
1
0
2012-10-10
1
1
2013-06-12
1
2
2015-03-04
1
3
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
Y
BMRB
Y
RCSB
2012-09-21
REL
REL
REL
REL
1766
456
495
550
496
target function
80
20
2D 1H-15N HSQC
4D APSY-HACANH
5D APSY-HACACONH
5D APSY-CBCACONH
3D 1H-15N NOESY
3D 1H-13C NOESY aliphatic
2D 1H-13C HSQC aromatic
1.2
mM
[U-99% 13C; U-99% 15N]
20
mM
50
mM
4.5
mM
0.0798
6.0
ambient
298
K
molecular dynamics
1
closest to the average
1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM potassium phosphate, 50 mM sodium chloride, 4.5 mM sodium azide, 95% H2O/5% D2O
95% H2O/5% D2O
Bruker Biospin
collection
TopSpin
2.1
Bruker Biospin
processing
TopSpin
2.1
Bartels et al.
processing
XEASY
Keller and Wuthrich
chemical shift assignment
CARA
Keller and Wuthrich
data analysis
CARA
Herrmann and Wuthrich
peak picking
UNIO
Herrmann and Wuthrich
chemical shift assignment
UNIO
Herrmann and Wuthrich
structure solution
UNIO
Luginbuhl, Guntert, Billeter and Wuthrich
refinement
OPAL
Guntert, Mumenthaler and Wuthrich
structure solution
CYANA
600
Bruker
AVANCE
Bruker Avance
800
Bruker
AVANCE
Bruker Avance
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
HIS
3
n
3
HIS
3
A
GLU
4
n
4
GLU
4
A
GLY
5
n
5
GLY
5
A
GLU
6
n
6
GLU
6
A
PRO
7
n
7
PRO
7
A
VAL
8
n
8
VAL
8
A
VAL
9
n
9
VAL
9
A
GLY
10
n
10
GLY
10
A
MET
11
n
11
MET
11
A
ASP
12
n
12
ASP
12
A
LYS
13
n
13
LYS
13
A
SER
14
n
14
SER
14
A
LEU
15
n
15
LEU
15
A
PHE
16
n
16
PHE
16
A
ALA
17
n
17
ALA
17
A
GLY
18
n
18
GLY
18
A
ASN
19
n
19
ASN
19
A
THR
20
n
20
THR
20
A
VAL
21
n
21
VAL
21
A
ILE
22
n
22
ILE
22
A
ARG
23
n
23
ARG
23
A
GLU
24
n
24
GLU
24
A
ILE
25
n
25
ILE
25
A
THR
26
n
26
THR
26
A
VAL
27
n
27
VAL
27
A
GLN
28
n
28
GLN
28
A
PRO
29
n
29
PRO
29
A
ASN
30
n
30
ASN
30
A
ILE
31
n
31
ILE
31
A
GLY
32
n
32
GLY
32
A
LEU
33
n
33
LEU
33
A
LEU
34
n
34
LEU
34
A
TYR
35
n
35
TYR
35
A
ASP
36
n
36
ASP
36
A
GLY
37
n
37
GLY
37
A
MET
38
n
38
MET
38
A
PHE
39
n
39
PHE
39
A
SER
40
n
40
SER
40
A
GLY
41
n
41
GLY
41
A
CYS
42
n
42
CYS
42
A
THR
43
n
43
THR
43
A
ALA
44
n
44
ALA
44
A
LEU
45
n
45
LEU
45
A
GLU
46
n
46
GLU
46
A
LYS
47
n
47
LYS
47
A
LEU
48
n
48
LEU
48
A
ILE
49
n
49
ILE
49
A
LEU
50
n
50
LEU
50
A
THR
51
n
51
THR
51
A
GLY
52
n
52
GLY
52
A
GLU
53
n
53
GLU
53
A
ASP
54
n
54
ASP
54
A
PRO
55
n
55
PRO
55
A
SER
56
n
56
SER
56
A
ALA
57
n
57
ALA
57
A
TYR
58
n
58
TYR
58
A
SER
59
n
59
SER
59
A
ALA
60
n
60
ALA
60
A
GLY
61
n
61
GLY
61
A
ASP
62
n
62
ASP
62
A
GLY
63
n
63
GLY
63
A
LEU
64
n
64
LEU
64
A
ARG
65
n
65
ARG
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
ALA
68
n
68
ALA
68
A
ASP
69
n
69
ASP
69
A
PHE
70
n
70
PHE
70
A
LEU
71
n
71
LEU
71
A
ILE
72
n
72
ILE
72
A
CYS
73
n
73
CYS
73
A
VAL
74
n
74
VAL
74
A
PRO
75
n
75
PRO
75
A
GLU
76
n
76
GLU
76
A
GLU
77
n
77
GLU
77
A
ALA
78
n
78
ALA
78
A
LEU
79
n
79
LEU
79
A
ASP
80
n
80
ASP
80
A
ARG
81
n
81
ARG
81
A
TYR
82
n
82
TYR
82
A
ARG
83
n
83
ARG
83
A
ARG
84
n
84
ARG
84
A
ASP
85
n
85
ASP
85
A
TYR
86
n
86
TYR
86
A
PHE
87
n
87
PHE
87
A
TRP
88
n
88
TRP
88
A
GLN
89
n
89
GLN
89
A
THR
90
n
90
THR
90
A
TYR
91
n
91
TYR
91
A
ALA
92
n
92
ALA
92
A
ALA
93
n
93
ALA
93
A
TRP
94
n
94
TRP
94
A
ILE
95
n
95
ILE
95
A
GLN
96
n
96
GLN
96
A
PRO
97
n
97
PRO
97
A
MET
98
n
98
MET
98
A
GLU
99
n
99
GLU
99
A
GLN
100
n
100
GLN
100
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
25
A
N
ILE
25
A
O
ILE
49
A
O
ILE
49
A
N
LEU
48
A
N
LEU
48
A
O
CYS
73
A
O
CYS
73
A
N
ILE
72
A
N
ILE
72
A
O
GLN
96
A
O
GLN
96
2
A
A
OD1
HG
ASP
SER
12
14
1.58
4
A
A
OD1
HG
ASP
SER
54
56
1.58
16
A
A
OD1
HG
ASP
SER
54
56
1.58
20
A
A
OD1
HG
ASP
SER
54
56
1.53
4
A
A
GLY
GLU
5
6
148.08
1
A
ARG
23
0.110
SIDE CHAIN
3
A
ARG
81
0.120
SIDE CHAIN
3
A
TYR
82
0.122
SIDE CHAIN
4
A
ARG
23
0.094
SIDE CHAIN
4
A
ARG
65
0.120
SIDE CHAIN
5
A
ARG
65
0.133
SIDE CHAIN
6
A
ARG
81
0.088
SIDE CHAIN
7
A
ARG
23
0.110
SIDE CHAIN
8
A
ARG
23
0.101
SIDE CHAIN
8
A
TYR
35
0.073
SIDE CHAIN
8
A
ARG
81
0.173
SIDE CHAIN
8
A
TYR
86
0.075
SIDE CHAIN
8
A
TYR
91
0.078
SIDE CHAIN
9
A
TYR
35
0.097
SIDE CHAIN
9
A
ARG
83
0.128
SIDE CHAIN
11
A
ARG
23
0.094
SIDE CHAIN
11
A
ARG
65
0.083
SIDE CHAIN
11
A
ARG
81
0.147
SIDE CHAIN
12
A
PHE
16
0.090
SIDE CHAIN
12
A
ARG
65
0.181
SIDE CHAIN
13
A
ARG
83
0.082
SIDE CHAIN
16
A
ARG
65
0.105
SIDE CHAIN
16
A
TYR
82
0.084
SIDE CHAIN
17
A
ARG
83
0.099
SIDE CHAIN
18
A
TYR
82
0.096
SIDE CHAIN
18
A
TYR
91
0.079
SIDE CHAIN
19
A
ARG
23
0.083
SIDE CHAIN
19
A
ARG
83
0.116
SIDE CHAIN
20
A
ARG
65
0.154
SIDE CHAIN
20
A
TYR
91
0.098
SIDE CHAIN
5
16.45
1.70
111.00
127.45
A
A
A
CB
CG
CD2
LEU
LEU
LEU
45
45
45
N
5
-4.15
0.50
120.30
116.15
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
81
81
81
N
6
16.62
1.70
111.00
127.62
A
A
A
CB
CG
CD2
LEU
LEU
LEU
45
45
45
N
7
16.75
1.70
111.00
127.75
A
A
A
CB
CG
CD2
LEU
LEU
LEU
45
45
45
N
12
16.21
1.70
111.00
127.21
A
A
A
CB
CG
CD2
LEU
LEU
LEU
45
45
45
N
13
15.23
2.50
121.70
136.93
A
A
A
C
N
CA
MET
ASP
ASP
11
12
12
Y
13
15.89
1.70
111.00
126.89
A
A
A
CB
CG
CD2
LEU
LEU
LEU
45
45
45
N
15
14.51
1.70
111.00
125.51
A
A
A
CB
CG
CD2
LEU
LEU
LEU
45
45
45
N
17
14.21
1.70
111.00
125.21
A
A
A
CB
CG
CD2
LEU
LEU
LEU
45
45
45
N
1
A
MET
11
58.51
17.72
1
A
PHE
16
-147.16
-49.45
1
A
ILE
31
-117.17
63.13
1
A
TYR
35
-72.22
-165.24
1
A
THR
51
-88.90
30.09
1
A
ASP
62
174.85
-32.64
1
A
ASP
69
-162.97
101.22
1
A
PHE
87
-140.92
-68.42
2
A
MET
11
53.73
-11.33
2
A
LEU
15
-110.70
75.92
2
A
PHE
16
-130.51
-55.47
2
A
ALA
17
-73.68
30.52
2
A
THR
20
-65.66
6.48
2
A
SER
40
-63.59
94.16
2
A
PHE
87
-137.24
-64.34
3
A
SER
14
-150.01
-44.49
3
A
LEU
15
-63.85
10.48
3
A
ALA
17
-103.02
79.74
3
A
THR
20
-66.35
31.06
3
A
VAL
21
-145.88
-7.75
3
A
ASN
30
47.80
74.29
3
A
ILE
31
-143.00
33.16
3
A
TYR
35
-70.44
-164.61
3
A
ASP
36
-59.31
-158.50
3
A
CYS
42
-68.39
73.79
3
A
THR
43
-63.70
2.07
3
A
ALA
44
-148.91
39.88
3
A
ASP
62
-122.04
-57.49
3
A
ALA
92
-68.10
3.68
4
A
SER
2
-152.20
85.29
4
A
HIS
3
66.31
169.92
4
A
PRO
7
-69.18
91.02
4
A
MET
11
58.82
-60.91
4
A
SER
14
-173.21
54.13
4
A
LEU
15
-158.15
61.51
4
A
PHE
16
-131.44
-44.47
4
A
THR
20
-52.00
9.85
4
A
VAL
21
-140.87
19.80
4
A
ILE
31
-144.93
55.31
4
A
THR
51
-82.27
45.10
4
A
ALA
57
-69.53
9.82
4
A
ASP
69
-160.91
104.58
5
A
HIS
3
44.23
81.69
5
A
MET
11
-140.18
-35.58
5
A
SER
14
-161.92
-52.65
5
A
LEU
15
-64.36
8.41
5
A
THR
20
-65.57
19.61
5
A
TYR
35
-75.69
-166.62
5
A
SER
40
-57.16
109.78
5
A
ALA
60
174.72
-17.37
5
A
ASP
62
-144.27
14.78
5
A
TRP
88
-58.52
-9.10
6
A
HIS
3
176.50
159.82
6
A
MET
11
-146.54
-51.98
6
A
ALA
17
-68.47
85.21
6
A
ILE
22
-65.16
99.09
6
A
SER
59
-102.96
-164.39
6
A
ALA
60
77.05
142.64
6
A
GLU
99
-103.20
-166.66
7
A
HIS
3
-147.14
36.93
7
A
MET
11
57.89
-20.88
7
A
LYS
13
-73.16
28.60
7
A
ALA
17
-64.53
14.65
7
A
ASN
30
48.51
19.43
7
A
ILE
31
-95.06
55.48
7
A
THR
51
-77.53
39.24
7
A
ASP
69
-167.73
99.37
8
A
HIS
3
-154.47
39.38
8
A
MET
11
-136.11
-51.57
8
A
ALA
17
-61.76
87.29
8
A
THR
20
-68.81
28.38
8
A
VAL
21
-143.96
-9.28
8
A
TYR
86
-72.89
24.49
8
A
PHE
87
-153.23
-67.32
9
A
VAL
9
-110.57
68.23
9
A
MET
11
59.20
10.07
9
A
SER
14
-162.46
10.43
9
A
ALA
17
-71.45
43.87
9
A
THR
20
-64.24
22.04
9
A
CYS
42
-69.85
74.19
9
A
THR
43
-58.16
-7.83
9
A
ALA
60
-161.06
1.98
9
A
ASP
62
-150.69
38.96
9
A
ASP
69
-161.02
106.87
10
A
SER
2
-153.10
88.64
10
A
GLU
4
-167.69
100.37
10
A
MET
11
-128.38
-56.79
10
A
SER
14
-114.27
62.61
10
A
ALA
17
-62.28
92.57
10
A
VAL
21
-140.72
14.02
10
A
LEU
34
-100.64
75.08
10
A
ALA
44
-140.05
49.89
10
A
TYR
58
-110.41
-168.63
11
A
THR
20
-70.94
33.48
11
A
ALA
57
-65.26
6.27
11
A
ALA
60
177.10
-13.56
11
A
ASP
62
-140.39
-13.16
11
A
ALA
68
-160.26
-163.84
12
A
MET
11
58.42
13.80
12
A
PHE
16
-142.24
-49.06
12
A
THR
20
-62.34
24.21
12
A
ILE
22
-62.51
99.28
12
A
SER
40
-56.91
105.54
12
A
ALA
60
-174.06
118.81
12
A
GLU
99
-100.98
-167.96
13
A
GLU
4
-88.08
40.77
13
A
MET
11
63.19
-31.68
13
A
ASP
12
-44.39
43.39
13
A
SER
14
-164.61
4.25
13
A
ALA
17
-64.43
33.27
13
A
VAL
21
-144.05
16.79
13
A
SER
40
-69.89
94.41
13
A
ASP
69
-154.61
76.27
13
A
GLU
99
-111.81
-164.96
14
A
MET
11
56.40
4.13
14
A
SER
14
-145.14
-16.98
14
A
PHE
16
-142.01
-52.00
14
A
THR
51
-93.44
57.43
15
A
SER
2
-153.89
72.21
15
A
MET
11
-141.41
27.08
15
A
LEU
15
-70.61
23.03
15
A
VAL
21
-151.81
29.41
15
A
SER
40
-66.31
98.14
15
A
THR
43
-72.19
25.81
15
A
ALA
44
-140.92
17.02
15
A
LEU
64
-160.37
-47.69
15
A
ASP
69
-164.60
91.61
16
A
MET
11
69.82
-55.74
16
A
ASP
12
-56.26
106.90
16
A
SER
14
-168.19
-16.52
16
A
ALA
17
-50.67
95.32
16
A
VAL
21
-145.63
46.82
16
A
ASP
62
-142.96
-7.46
16
A
ARG
65
-108.30
74.79
17
A
SER
14
-156.15
-2.45
17
A
ALA
17
-72.42
28.89
17
A
ILE
31
-140.71
55.73
17
A
THR
51
-88.52
38.27
17
A
ALA
60
-175.03
-177.56
17
A
PHE
87
-146.22
-59.25
18
A
MET
11
61.05
-55.43
18
A
SER
14
-153.24
-14.94
18
A
ASN
30
62.93
-7.13
18
A
ILE
31
-99.83
54.19
18
A
LEU
34
-117.90
73.94
18
A
SER
40
-66.96
96.88
18
A
ALA
44
-91.51
58.01
18
A
PHE
87
-69.04
-74.21
19
A
SER
2
-77.26
-168.57
19
A
MET
11
48.20
28.88
19
A
SER
14
-166.68
19.73
19
A
LEU
15
-156.52
64.91
19
A
PHE
16
-140.00
-10.44
19
A
CYS
42
-68.02
74.81
19
A
ALA
44
-116.57
63.87
19
A
THR
51
-79.28
37.22
19
A
ARG
65
-102.52
40.95
19
A
PHE
87
-95.42
-60.38
20
A
HIS
3
-144.02
47.32
20
A
VAL
9
-100.10
66.87
20
A
MET
11
57.98
-58.38
20
A
SER
14
-143.79
-9.02
20
A
ALA
17
-72.68
47.62
20
A
VAL
21
-146.19
55.02
20
A
GLU
46
-143.03
-20.48
20
A
ASP
62
-147.56
-9.60
20
A
ALA
93
-69.65
5.07
20
A
GLU
99
-69.08
-177.60
closest to the average, model6
NMR structure of the protein ZP_02034617.1 from Bacteroides capillosus ATCC 29799
1
N
N
A
ASP
54
A
ASP
54
HELX_P
A
TYR
58
A
TYR
58
5
1
5
A
PRO
75
A
PRO
75
HELX_P
A
ARG
84
A
ARG
84
1
2
10
A
PHE
87
A
PHE
87
HELX_P
A
ALA
92
A
ALA
92
5
3
6
Structural Genomics, Unknown Function
Leucine Rich Repeat Protein, Structural Genomics, Unknown Function, PSI-Biology, Joint Center for Structural Genomics, JCSG
A6NPT5_9FIRM
UNP
1
379
A6NPT5
GSHEGEPVVGMDKSLFAGNTVIREITVQPNIGLLYDGMFSGCTALEKLILTGEDPSAYSAGDGLRDGADFLICVPEEALD
RYRRDYFWQTYAAWIQPMEQ
379
478
2LZ0
1
100
A6NPT5
A
1
1
100
4
parallel
parallel
parallel
A
ILE
25
A
ILE
25
A
VAL
27
A
VAL
27
A
LEU
48
A
LEU
48
A
LEU
50
A
LEU
50
A
ILE
72
A
ILE
72
A
VAL
74
A
VAL
74
A
ILE
95
A
ILE
95
A
PRO
97
A
PRO
97