1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Madl, T. Sattler, M. Zhang, Y. Bagdiul, I. Kern, T. Kang, H. Zou, P. Maeusbacher, N. Sieber, S.A. Kraemer, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 S C N 149 N C N 150 N C N 151 N C N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N C N 173 N C N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 N C N 193 N C N 194 N C N 195 N C N 196 N N N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 S C N 215 N C N 216 N O N 217 N C N 218 N C N 219 N S N 220 N C N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N N N 234 S C N 235 N C N 236 N O N 237 N C Y 238 N C Y 239 N C Y 240 N C Y 241 N C Y 242 N C Y 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N C N 262 N C N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N O N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 R C N 292 N O N 293 N C N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C Y 309 N C Y 310 N C Y 311 N C Y 312 N C Y 313 N C Y 314 N C N 315 N O N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C N 333 N C N 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing Y 233 N doub Y 234 N sing Y 235 N sing N 236 N sing Y 237 N doub N 238 N sing Y 239 N doub N 240 N sing Y 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N doub N 307 N sing Y 308 N doub N 309 N sing Y 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N doub N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing UK Nucleic Acids Res. NARHAD 0389 0305-1048 41 1343 1354 10.1093/nar/gks1097 23175611 Structure, phosphorylation and U2AF65 binding of the N-terminal domain of splicing factor 1 during 3'-splice site recognition. 2013 10.2210/pdb2m09/pdb pdb_00002m09 10.13018/BMR18802 13821.770 Splicing factor 1 UNP residues 27-145 1 man polymer Mammalian branch point-binding protein, BBP, mBBP, Transcription factor ZFM1, Zinc finger gene in MEN1 locus, Zinc finger protein 162 no no GAMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKK LEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD GAMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKK LEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample SF1, ZFM1, ZNF162 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) petM11 database_2 pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer struct_ref_seq_dif chem_comp_atom chem_comp_bond database_2 repository Initial release Data collection Database references Other Data collection Database references 1 0 2013-01-30 1 1 2023-06-14 1 2 2024-05-15 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details _database_2.pdbx_DOI BMRB Y RCSB 2012-10-22 REL REL REL REL structures with the lowest energy 100 10 2D 1H-15N HSQC 2D 1H-13C HSQC 2D 1H-1H NOESY 3D CBCA(CO)NH 3D HNCA 3D HNCACB 3D HCCH-TOCSY 3D 1H-15N NOESY 3D 1H-13C NOESY aliphatic 3D 1H-13C NOESY aromatic 100-600 uM [U-15N] 100-600 uM [U-13C; U-15N] 100-600 uM [U-13C; U-15N; U-2H] 70 6.5 ambient 298 K simulated annealing 1 lowest energy 100-600 uM [U-15N] protein, 100-600 uM [U-13C; U-15N] entity, 100-600 uM [U-13C; U-15N; U-2H] entity, 90% H2O/10% D2O 90% H2O/10% D2O Linge, O'Donoghue and Nilges structure solution ARIA 2.1 Guntert, Mumenthaler and Wuthrich structure solution CYANA 3.0 Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRPipe Goddard chemical shift assignment Sparky Bruker Biospin collection TopSpin Bruker Biospin processing TopSpin Linge, O'Donoghue and Nilges refinement ARIA 2.1 Guntert, Mumenthaler and Wuthrich refinement CYANA 3.0 900 Bruker AVANCE Bruker Avance 750 Bruker AVANCE Bruker Avance 600 Bruker AVANCE Bruker Avance 500 Bruker AVANCE Bruker Avance GLY 25 n 1 GLY 25 A ALA 26 n 2 ALA 26 A MET 27 n 3 MET 27 A GLU 28 n 4 GLU 28 A GLN 29 n 5 GLN 29 A LYS 30 n 6 LYS 30 A THR 31 n 7 THR 31 A VAL 32 n 8 VAL 32 A ILE 33 n 9 ILE 33 A PRO 34 n 10 PRO 34 A GLY 35 n 11 GLY 35 A MET 36 n 12 MET 36 A PRO 37 n 13 PRO 37 A THR 38 n 14 THR 38 A VAL 39 n 15 VAL 39 A ILE 40 n 16 ILE 40 A PRO 41 n 17 PRO 41 A PRO 42 n 18 PRO 42 A GLY 43 n 19 GLY 43 A LEU 44 n 20 LEU 44 A THR 45 n 21 THR 45 A ARG 46 n 22 ARG 46 A GLU 47 n 23 GLU 47 A GLN 48 n 24 GLN 48 A GLU 49 n 25 GLU 49 A ARG 50 n 26 ARG 50 A ALA 51 n 27 ALA 51 A TYR 52 n 28 TYR 52 A ILE 53 n 29 ILE 53 A VAL 54 n 30 VAL 54 A GLN 55 n 31 GLN 55 A LEU 56 n 32 LEU 56 A GLN 57 n 33 GLN 57 A ILE 58 n 34 ILE 58 A GLU 59 n 35 GLU 59 A ASP 60 n 36 ASP 60 A LEU 61 n 37 LEU 61 A THR 62 n 38 THR 62 A ARG 63 n 39 ARG 63 A LYS 64 n 40 LYS 64 A LEU 65 n 41 LEU 65 A ARG 66 n 42 ARG 66 A THR 67 n 43 THR 67 A GLY 68 n 44 GLY 68 A ASP 69 n 45 ASP 69 A LEU 70 n 46 LEU 70 A GLY 71 n 47 GLY 71 A ILE 72 n 48 ILE 72 A PRO 73 n 49 PRO 73 A PRO 74 n 50 PRO 74 A ASN 75 n 51 ASN 75 A PRO 76 n 52 PRO 76 A GLU 77 n 53 GLU 77 A ASP 78 n 54 ASP 78 A ARG 79 n 55 ARG 79 A SER 80 n 56 SER 80 A PRO 81 n 57 PRO 81 A SER 82 n 58 SER 82 A PRO 83 n 59 PRO 83 A GLU 84 n 60 GLU 84 A PRO 85 n 61 PRO 85 A ILE 86 n 62 ILE 86 A TYR 87 n 63 TYR 87 A ASN 88 n 64 ASN 88 A SER 89 n 65 SER 89 A GLU 90 n 66 GLU 90 A GLY 91 n 67 GLY 91 A LYS 92 n 68 LYS 92 A ARG 93 n 69 ARG 93 A LEU 94 n 70 LEU 94 A ASN 95 n 71 ASN 95 A THR 96 n 72 THR 96 A ARG 97 n 73 ARG 97 A GLU 98 n 74 GLU 98 A PHE 99 n 75 PHE 99 A ARG 100 n 76 ARG 100 A THR 101 n 77 THR 101 A ARG 102 n 78 ARG 102 A LYS 103 n 79 LYS 103 A LYS 104 n 80 LYS 104 A LEU 105 n 81 LEU 105 A GLU 106 n 82 GLU 106 A GLU 107 n 83 GLU 107 A GLU 108 n 84 GLU 108 A ARG 109 n 85 ARG 109 A HIS 110 n 86 HIS 110 A ASN 111 n 87 ASN 111 A LEU 112 n 88 LEU 112 A ILE 113 n 89 ILE 113 A THR 114 n 90 THR 114 A GLU 115 n 91 GLU 115 A MET 116 n 92 MET 116 A VAL 117 n 93 VAL 117 A ALA 118 n 94 ALA 118 A LEU 119 n 95 LEU 119 A ASN 120 n 96 ASN 120 A PRO 121 n 97 PRO 121 A ASP 122 n 98 ASP 122 A PHE 123 n 99 PHE 123 A LYS 124 n 100 LYS 124 A PRO 125 n 101 PRO 125 A PRO 126 n 102 PRO 126 A ALA 127 n 103 ALA 127 A ASP 128 n 104 ASP 128 A TYR 129 n 105 TYR 129 A LYS 130 n 106 LYS 130 A PRO 131 n 107 PRO 131 A PRO 132 n 108 PRO 132 A ALA 133 n 109 ALA 133 A THR 134 n 110 THR 134 A ARG 135 n 111 ARG 135 A VAL 136 n 112 VAL 136 A SER 137 n 113 SER 137 A ASP 138 n 114 ASP 138 A LYS 139 n 115 LYS 139 A VAL 140 n 116 VAL 140 A MET 141 n 117 MET 141 A ILE 142 n 118 ILE 142 A PRO 143 n 119 PRO 143 A GLN 144 n 120 GLN 144 A ASP 145 n 121 ASP 145 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A OD2 HH12 ASP ARG 78 97 1.58 5 A A OE1 HZ1 GLU LYS 90 92 1.59 6 A A HZ1 OE2 LYS GLU 103 106 1.59 8 A A HZ2 OE2 LYS GLU 104 108 1.59 10 A A HZ3 OE1 LYS GLU 103 106 1.55 2 A ARG 79 0.074 SIDE CHAIN 3 A ARG 50 0.078 SIDE CHAIN 4 A ARG 102 0.104 SIDE CHAIN 6 A ARG 93 0.083 SIDE CHAIN 9 A ARG 46 0.116 SIDE CHAIN 1 A ALA 26 73.64 160.52 1 A PRO 85 -37.13 137.50 1 A SER 137 -159.37 22.35 2 A THR 96 -91.57 -78.91 2 A LYS 139 66.26 80.59 3 A ALA 26 -106.01 -160.39 3 A LEU 94 -135.72 -93.22 3 A VAL 136 71.92 -70.76 3 A SER 137 32.36 69.72 4 A LEU 94 -135.26 -152.81 4 A THR 96 -94.51 -75.28 4 A ALA 133 -162.46 28.05 5 A PRO 76 -27.80 -33.81 5 A THR 96 -105.00 -76.81 5 A LYS 139 178.38 -29.59 6 A ALA 26 74.36 -35.12 6 A THR 96 -99.98 -77.25 7 A ALA 26 74.23 -42.37 7 A GLU 28 -86.93 -81.69 7 A GLN 29 61.24 -171.27 7 A LEU 94 -128.33 -93.77 7 A THR 96 -90.33 -68.43 7 A ARG 135 -113.27 -161.06 8 A LEU 94 -129.05 -157.91 8 A ARG 135 72.43 125.15 8 A SER 137 60.70 80.53 9 A MET 27 73.36 -61.47 9 A LEU 94 -102.47 -159.21 9 A LYS 139 65.41 -172.27 10 A ARG 79 62.52 -70.64 10 A PRO 81 -49.52 152.30 10 A LEU 94 -104.77 -165.82 lowest energy, model 1 Structure, phosphorylation and U2AF65 binding of the Nterminal Domain of splicing factor 1 during 3 splice site Recognition 1 N N A THR 45 A THR 21 HELX_P A GLY 68 A GLY 44 1 1 24 A ASN 75 A ASN 51 HELX_P A SER 80 A SER 56 5 2 6 A THR 96 A THR 72 HELX_P A ASN 120 A ASN 96 1 3 25 TRANSCRIPTION spliceosome assembly, SF1, UHM, ULM, RRM, TRANSCRIPTION SF01_HUMAN UNP 1 27 Q15637 MEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLE EERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQD 27 145 2M09 27 145 Q15637 A 1 3 121 1 expression tag GLY 25 2M09 A Q15637 UNP 1 1 expression tag ALA 26 2M09 A Q15637 UNP 2