1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Yang, D. Gao, Z. Lin, Z. Huang, W. Lai, C. Fan, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Plos One 1932-6203 8 e56142 e56142 10.1371/journal.pone.0056142 23418525 Structural characterization of minor ampullate spidroin domains and their distinct roles in fibroin solubility and fiber formation 2013 10505.701 Minor ampullate fibroin 1 UNP residues 250-356 2 man polymer no no VGTTVASTTSRLSTAEASSRISTAASTLVSGGYLNTAALPSVIADLFAQVGASSPGVSDSEVLIQVLLEIVSSLIHILSS SSVGQVDFSSVGSSAAAVGQSMQVVMG VGTTVASTTSRLSTAEASSRISTAASTLVSGGYLNTAALPSVIADLFAQVGASSPGVSDSEVLIQVLLEIVSSLIHILSS SSVGQVDFSSVGSSAAAVGQSMQVVMG A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 171624 Nephila antipodiana 562 Escherichia coli pET-32a derived vector repository Initial release 1 0 2013-03-27 BMRB Y PDBJ 2012-10-30 REL REL REL structures with the lowest energy 100 10 1 2D 1H-15N HSQC 3D HNCA 3D HN(CO)CA 2D 1H-13C HSQC 3D MQ-CCH-TOCSY 4D 13C, 15N-edited NOESY 1 mM [U-100% 13C; U-100% 15N] 10 mM 0.01 % 5 mM 50 mM 0.06 6.8 ambient 307 K simulated annealing 1 lowest energy 1mM [U-100% 13C; U-100% 15N] CTD-1, 10mM sodium phosphate-2, 0.01% sodium azide-3, 5mM EDTA-4, 50mM sodium chloride-5, 93% H2O/7% D2O 93% H2O/7% D2O Bruker Biospin collection TOPSPIN Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRPipe Guntert, Mumenthaler and Wuthrich structure solution CYANA Koradi, Billeter and Wuthrich data analysis Molmol Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRDraw Cornilescu, Delaglio and Bax processing TALOS Daiwen Yang, Yu Zheng peak picking NMRspy Daiwen Yang, Yu Zheng chemical shift assignment NMRspy Daiwen Yang, Yu Zheng noe assignment NMRspy refinement CYANA 800 Bruker Avance Bruker Avance VAL 17 n 1 VAL 17 A GLY 18 n 2 GLY 18 A THR 19 n 3 THR 19 A THR 20 n 4 THR 20 A VAL 21 n 5 VAL 21 A ALA 22 n 6 ALA 22 A SER 23 n 7 SER 23 A THR 24 n 8 THR 24 A THR 25 n 9 THR 25 A SER 26 n 10 SER 26 A ARG 27 n 11 ARG 27 A LEU 28 n 12 LEU 28 A SER 29 n 13 SER 29 A THR 30 n 14 THR 30 A ALA 31 n 15 ALA 31 A GLU 32 n 16 GLU 32 A ALA 33 n 17 ALA 33 A SER 34 n 18 SER 34 A SER 35 n 19 SER 35 A ARG 36 n 20 ARG 36 A ILE 37 n 21 ILE 37 A SER 38 n 22 SER 38 A THR 39 n 23 THR 39 A ALA 40 n 24 ALA 40 A ALA 41 n 25 ALA 41 A SER 42 n 26 SER 42 A THR 43 n 27 THR 43 A LEU 44 n 28 LEU 44 A VAL 45 n 29 VAL 45 A SER 46 n 30 SER 46 A GLY 47 n 31 GLY 47 A GLY 48 n 32 GLY 48 A TYR 49 n 33 TYR 49 A LEU 50 n 34 LEU 50 A ASN 51 n 35 ASN 51 A THR 52 n 36 THR 52 A ALA 53 n 37 ALA 53 A ALA 54 n 38 ALA 54 A LEU 55 n 39 LEU 55 A PRO 56 n 40 PRO 56 A SER 57 n 41 SER 57 A VAL 58 n 42 VAL 58 A ILE 59 n 43 ILE 59 A ALA 60 n 44 ALA 60 A ASP 61 n 45 ASP 61 A LEU 62 n 46 LEU 62 A PHE 63 n 47 PHE 63 A ALA 64 n 48 ALA 64 A GLN 65 n 49 GLN 65 A VAL 66 n 50 VAL 66 A GLY 67 n 51 GLY 67 A ALA 68 n 52 ALA 68 A SER 69 n 53 SER 69 A SER 70 n 54 SER 70 A PRO 71 n 55 PRO 71 A GLY 72 n 56 GLY 72 A VAL 73 n 57 VAL 73 A SER 74 n 58 SER 74 A ASP 75 n 59 ASP 75 A SER 76 n 60 SER 76 A GLU 77 n 61 GLU 77 A VAL 78 n 62 VAL 78 A LEU 79 n 63 LEU 79 A ILE 80 n 64 ILE 80 A GLN 81 n 65 GLN 81 A VAL 82 n 66 VAL 82 A LEU 83 n 67 LEU 83 A LEU 84 n 68 LEU 84 A GLU 85 n 69 GLU 85 A ILE 86 n 70 ILE 86 A VAL 87 n 71 VAL 87 A SER 88 n 72 SER 88 A SER 89 n 73 SER 89 A LEU 90 n 74 LEU 90 A ILE 91 n 75 ILE 91 A HIS 92 n 76 HIS 92 A ILE 93 n 77 ILE 93 A LEU 94 n 78 LEU 94 A SER 95 n 79 SER 95 A SER 96 n 80 SER 96 A SER 97 n 81 SER 97 A SER 98 n 82 SER 98 A VAL 99 n 83 VAL 99 A GLY 100 n 84 GLY 100 A GLN 101 n 85 GLN 101 A VAL 102 n 86 VAL 102 A ASP 103 n 87 ASP 103 A PHE 104 n 88 PHE 104 A SER 105 n 89 SER 105 A SER 106 n 90 SER 106 A VAL 107 n 91 VAL 107 A GLY 108 n 92 GLY 108 A SER 109 n 93 SER 109 A SER 110 n 94 SER 110 A ALA 111 n 95 ALA 111 A ALA 112 n 96 ALA 112 A ALA 113 n 97 ALA 113 A VAL 114 n 98 VAL 114 A GLY 115 n 99 GLY 115 A GLN 116 n 100 GLN 116 A SER 117 n 101 SER 117 A MET 118 n 102 MET 118 A GLN 119 n 103 GLN 119 A VAL 120 n 104 VAL 120 A VAL 121 n 105 VAL 121 A MET 122 n 106 MET 122 A GLY 123 n 107 GLY 123 A VAL 17 n 1 VAL 17 B GLY 18 n 2 GLY 18 B THR 19 n 3 THR 19 B THR 20 n 4 THR 20 B VAL 21 n 5 VAL 21 B ALA 22 n 6 ALA 22 B SER 23 n 7 SER 23 B THR 24 n 8 THR 24 B THR 25 n 9 THR 25 B SER 26 n 10 SER 26 B ARG 27 n 11 ARG 27 B LEU 28 n 12 LEU 28 B SER 29 n 13 SER 29 B THR 30 n 14 THR 30 B ALA 31 n 15 ALA 31 B GLU 32 n 16 GLU 32 B ALA 33 n 17 ALA 33 B SER 34 n 18 SER 34 B SER 35 n 19 SER 35 B ARG 36 n 20 ARG 36 B ILE 37 n 21 ILE 37 B SER 38 n 22 SER 38 B THR 39 n 23 THR 39 B ALA 40 n 24 ALA 40 B ALA 41 n 25 ALA 41 B SER 42 n 26 SER 42 B THR 43 n 27 THR 43 B LEU 44 n 28 LEU 44 B VAL 45 n 29 VAL 45 B SER 46 n 30 SER 46 B GLY 47 n 31 GLY 47 B GLY 48 n 32 GLY 48 B TYR 49 n 33 TYR 49 B LEU 50 n 34 LEU 50 B ASN 51 n 35 ASN 51 B THR 52 n 36 THR 52 B ALA 53 n 37 ALA 53 B ALA 54 n 38 ALA 54 B LEU 55 n 39 LEU 55 B PRO 56 n 40 PRO 56 B SER 57 n 41 SER 57 B VAL 58 n 42 VAL 58 B ILE 59 n 43 ILE 59 B ALA 60 n 44 ALA 60 B ASP 61 n 45 ASP 61 B LEU 62 n 46 LEU 62 B PHE 63 n 47 PHE 63 B ALA 64 n 48 ALA 64 B GLN 65 n 49 GLN 65 B VAL 66 n 50 VAL 66 B GLY 67 n 51 GLY 67 B ALA 68 n 52 ALA 68 B SER 69 n 53 SER 69 B SER 70 n 54 SER 70 B PRO 71 n 55 PRO 71 B GLY 72 n 56 GLY 72 B VAL 73 n 57 VAL 73 B SER 74 n 58 SER 74 B ASP 75 n 59 ASP 75 B SER 76 n 60 SER 76 B GLU 77 n 61 GLU 77 B VAL 78 n 62 VAL 78 B LEU 79 n 63 LEU 79 B ILE 80 n 64 ILE 80 B GLN 81 n 65 GLN 81 B VAL 82 n 66 VAL 82 B LEU 83 n 67 LEU 83 B LEU 84 n 68 LEU 84 B GLU 85 n 69 GLU 85 B ILE 86 n 70 ILE 86 B VAL 87 n 71 VAL 87 B SER 88 n 72 SER 88 B SER 89 n 73 SER 89 B LEU 90 n 74 LEU 90 B ILE 91 n 75 ILE 91 B HIS 92 n 76 HIS 92 B ILE 93 n 77 ILE 93 B LEU 94 n 78 LEU 94 B SER 95 n 79 SER 95 B SER 96 n 80 SER 96 B SER 97 n 81 SER 97 B SER 98 n 82 SER 98 B VAL 99 n 83 VAL 99 B GLY 100 n 84 GLY 100 B GLN 101 n 85 GLN 101 B VAL 102 n 86 VAL 102 B ASP 103 n 87 ASP 103 B PHE 104 n 88 PHE 104 B SER 105 n 89 SER 105 B SER 106 n 90 SER 106 B VAL 107 n 91 VAL 107 B GLY 108 n 92 GLY 108 B SER 109 n 93 SER 109 B SER 110 n 94 SER 110 B ALA 111 n 95 ALA 111 B ALA 112 n 96 ALA 112 B ALA 113 n 97 ALA 113 B VAL 114 n 98 VAL 114 B GLY 115 n 99 GLY 115 B GLN 116 n 100 GLN 116 B SER 117 n 101 SER 117 B MET 118 n 102 MET 118 B GLN 119 n 103 GLN 119 B VAL 120 n 104 VAL 120 B VAL 121 n 105 VAL 121 B MET 122 n 106 MET 122 B GLY 123 n 107 GLY 123 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A VAL 99 50.93 89.56 1 B SER 97 -62.53 -179.75 1 B VAL 99 47.22 85.45 2 A TYR 49 -178.11 -176.04 2 A SER 70 -118.12 70.19 2 A SER 98 -123.20 -169.14 2 B TYR 49 -173.66 -175.73 2 B SER 70 -117.67 70.51 2 B SER 97 -63.89 -175.51 3 A VAL 99 53.92 93.03 3 B SER 97 -57.10 -178.36 3 B VAL 99 48.47 86.94 4 A SER 97 -66.40 -171.59 4 A VAL 99 -64.55 96.63 4 B SER 97 -59.15 -175.76 4 B VAL 99 -56.58 90.69 5 A SER 70 -119.52 71.12 5 A SER 97 -58.51 172.07 5 A VAL 99 -51.04 100.55 5 B SER 97 -57.42 -176.95 5 B VAL 99 47.61 92.06 5 B GLN 101 -95.99 36.82 6 A VAL 45 -144.82 51.56 6 A SER 46 -38.99 -73.54 6 A TYR 49 177.17 -172.33 6 A VAL 99 67.26 -74.38 6 B VAL 45 -140.43 53.83 6 B TYR 49 175.19 -171.71 6 B SER 97 -56.99 178.37 6 B VAL 99 45.43 83.50 7 A SER 97 -67.79 -178.26 7 A VAL 99 66.47 -75.91 7 B SER 97 -59.91 -174.62 7 B VAL 99 73.60 -51.97 8 A SER 70 -116.24 70.76 8 A VAL 99 67.29 -74.94 8 A SER 105 -79.71 46.62 8 A SER 106 -171.43 28.90 8 B SER 70 -119.65 70.60 8 B SER 97 -54.11 175.79 8 B VAL 99 46.51 81.95 8 B SER 105 -76.56 45.25 8 B SER 106 -167.17 22.84 9 A VAL 99 62.45 -85.28 9 A SER 105 -77.95 47.45 9 A SER 106 -152.23 13.04 9 B TYR 49 -171.26 -173.52 9 B SER 97 -76.89 -168.02 9 B SER 98 -173.49 -166.98 9 B SER 105 -78.63 40.08 10 A VAL 45 -150.34 56.20 10 A SER 46 -66.73 80.92 10 A TYR 49 174.86 -173.29 10 A SER 97 -55.51 174.34 10 A SER 98 -112.45 -80.02 10 A VAL 99 175.71 -29.45 10 A SER 105 -77.77 48.31 10 A SER 106 -157.19 17.89 10 B VAL 45 -150.39 53.43 10 B SER 46 -66.21 78.77 10 B TYR 49 170.58 -170.96 10 B SER 97 -56.92 173.63 10 B VAL 99 56.07 93.07 10 B SER 105 -77.49 45.90 10 B SER 106 -152.81 13.76 Minor ampullate fibroin 1 lowest energy, model1 Structural Characterization of Minor Ampullate Spidroin Domains and their Distinct Roles in Fibroin Solubility and Fiber Formation 1 N N 1 N N A VAL 17 A VAL 1 HELX_P A SER 29 A SER 13 1 1 13 A THR 30 A THR 14 HELX_P A VAL 45 A VAL 29 1 2 16 A ALA 54 A ALA 38 HELX_P A SER 70 A SER 54 1 3 17 A SER 74 A SER 58 HELX_P A SER 95 A SER 79 1 4 22 A ASP 103 A ASP 87 HELX_P A SER 105 A SER 89 5 5 3 A SER 106 A SER 90 HELX_P A MET 122 A MET 106 1 6 17 B GLY 18 B GLY 2 HELX_P B SER 29 B SER 13 1 7 12 B THR 30 B THR 14 HELX_P B VAL 45 B VAL 29 1 8 16 B ALA 54 B ALA 38 HELX_P B SER 70 B SER 54 1 9 17 B SER 74 B SER 58 HELX_P B SER 95 B SER 79 1 10 22 B ASP 103 B ASP 87 HELX_P B SER 105 B SER 89 5 11 3 B SER 106 B SER 90 HELX_P B MET 122 B MET 106 1 12 17 PROTEIN FIBRIL Spider silk protein, MiSp1, CTD, Dimer, PROTEIN FIBRIL Q2LC34_9ARAC UNP 1 250 Q2LC34 VGTTVASTTSRLSTAEASSRISTAASTLVSGGYLNTAALPSVIADLFAQVGASSPGVSDSEVLIQVLLEIVSSLIHILSS SSVGQVDFSSVGSSAAAVGQSMQVVMG 250 356 2M0M 17 123 Q2LC34 A 1 1 107 250 356 2M0M 17 123 Q2LC34 B 1 1 107