1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Gayen, S.
Kang, C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Virol.
JOVIAM
0825
0022-538X
87
4609
4622
10.1128/JVI.02424-12
23408612
Membrane Topology and Function of Dengue Virus NS2A Protein.
2013
10.2210/pdb2m0s/pdb
pdb_00002m0s
2981.621
NS2A protein
UNP residues 1194-1221
1
syn
polymer
no
no
DIGMGVTYLALLAAFKVRPTFAAGLLLR
DIGMGVTYLALLAAFKVRPTFAAGLLLR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
repository
Initial release
Database references
Data collection
Database references
Other
1
0
2013-02-27
1
1
2013-04-24
1
2
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
BMRB
Y
RCSB
2012-11-05
REL
REL
REL
REL
11060
Dengue virus 2
sample
structures with the lowest energy
100
10
2D 1H-15N HSQC
2D 1H-1H TOCSY
2D 1H-1H NOESY
3
mg/mL
44.4
%
[U-2H]
44.4
%
[U-2H]
11.2
%
ambient
298
K
torsion angle dynamics
1
lowest energy
3 mg/mL protein, 44.4% [U-2H] chloroform, 44.4% [U-2H] methanol, 11.2% H2O
44.4% CDCl3/44.4CD3OH/11.2% H2O
Bruker Biospin
collection
TopSpin
2.1
Bruker Biospin
processing
TopSpin
2.1
Goddard
chemical shift assignment
Sparky
Guntert, Mumenthaler and Wuthrich
structure solution
CYANA
Guntert, Mumenthaler and Wuthrich
refinement
CYANA
700
Bruker
AVANCE
Bruker Avance
ASP
1
n
1
ASP
1
A
ILE
2
n
2
ILE
2
A
GLY
3
n
3
GLY
3
A
MET
4
n
4
MET
4
A
GLY
5
n
5
GLY
5
A
VAL
6
n
6
VAL
6
A
THR
7
n
7
THR
7
A
TYR
8
n
8
TYR
8
A
LEU
9
n
9
LEU
9
A
ALA
10
n
10
ALA
10
A
LEU
11
n
11
LEU
11
A
LEU
12
n
12
LEU
12
A
ALA
13
n
13
ALA
13
A
ALA
14
n
14
ALA
14
A
PHE
15
n
15
PHE
15
A
LYS
16
n
16
LYS
16
A
VAL
17
n
17
VAL
17
A
ARG
18
n
18
ARG
18
A
PRO
19
n
19
PRO
19
A
THR
20
n
20
THR
20
A
PHE
21
n
21
PHE
21
A
ALA
22
n
22
ALA
22
A
ALA
23
n
23
ALA
23
A
GLY
24
n
24
GLY
24
A
LEU
25
n
25
LEU
25
A
LEU
26
n
26
LEU
26
A
LEU
27
n
27
LEU
27
A
ARG
28
n
28
ARG
28
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ALA
13
-103.28
-61.14
2
A
ALA
13
-103.08
-61.16
2
A
ARG
18
-113.89
73.49
3
A
ALA
13
-102.61
-61.95
4
A
ALA
13
-102.95
-61.17
5
A
ALA
13
-102.05
-61.66
6
A
ALA
13
-103.03
-61.19
7
A
ARG
18
-41.54
103.22
8
A
ALA
13
-101.49
-61.11
8
A
LEU
27
-143.44
30.03
9
A
ALA
13
-102.90
-61.12
10
A
ALA
13
-103.10
-61.17
10
A
LEU
26
-63.72
-74.92
lowest energy, model 1
Solution Structure of the trans-membrane domain of the NS2A of dengue virus
1
N
N
A
GLY
3
A
GLY
3
HELX_P
A
TYR
8
A
TYR
8
1
1
6
A
PRO
19
A
PRO
19
HELX_P
A
GLY
24
A
GLY
24
1
2
6
VIRAL PROTEIN
nonstructural protein, membrane protein, VIRAL PROTEIN
Q9YKL3_9FLAV
UNP
1
1194
Q9YKL3
DIGMGVTYLALLAAFKVRPTFAAGLLLR
1194
1221
2M0S
1
28
Q9YKL3
A
1
1
28