1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Gayen, S. Kang, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Virol. JOVIAM 0825 0022-538X 87 4609 4622 10.1128/JVI.02424-12 23408612 Membrane Topology and Function of Dengue Virus NS2A Protein. 2013 10.2210/pdb2m0s/pdb pdb_00002m0s 2981.621 NS2A protein UNP residues 1194-1221 1 syn polymer no no DIGMGVTYLALLAAFKVRPTFAAGLLLR DIGMGVTYLALLAAFKVRPTFAAGLLLR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n database_2 pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer repository Initial release Database references Data collection Database references Other 1 0 2013-02-27 1 1 2013-04-24 1 2 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model BMRB Y RCSB 2012-11-05 REL REL REL REL 11060 Dengue virus 2 sample structures with the lowest energy 100 10 2D 1H-15N HSQC 2D 1H-1H TOCSY 2D 1H-1H NOESY 3 mg/mL 44.4 % [U-2H] 44.4 % [U-2H] 11.2 % ambient 298 K torsion angle dynamics 1 lowest energy 3 mg/mL protein, 44.4% [U-2H] chloroform, 44.4% [U-2H] methanol, 11.2% H2O 44.4% CDCl3/44.4CD3OH/11.2% H2O Bruker Biospin collection TopSpin 2.1 Bruker Biospin processing TopSpin 2.1 Goddard chemical shift assignment Sparky Guntert, Mumenthaler and Wuthrich structure solution CYANA Guntert, Mumenthaler and Wuthrich refinement CYANA 700 Bruker AVANCE Bruker Avance ASP 1 n 1 ASP 1 A ILE 2 n 2 ILE 2 A GLY 3 n 3 GLY 3 A MET 4 n 4 MET 4 A GLY 5 n 5 GLY 5 A VAL 6 n 6 VAL 6 A THR 7 n 7 THR 7 A TYR 8 n 8 TYR 8 A LEU 9 n 9 LEU 9 A ALA 10 n 10 ALA 10 A LEU 11 n 11 LEU 11 A LEU 12 n 12 LEU 12 A ALA 13 n 13 ALA 13 A ALA 14 n 14 ALA 14 A PHE 15 n 15 PHE 15 A LYS 16 n 16 LYS 16 A VAL 17 n 17 VAL 17 A ARG 18 n 18 ARG 18 A PRO 19 n 19 PRO 19 A THR 20 n 20 THR 20 A PHE 21 n 21 PHE 21 A ALA 22 n 22 ALA 22 A ALA 23 n 23 ALA 23 A GLY 24 n 24 GLY 24 A LEU 25 n 25 LEU 25 A LEU 26 n 26 LEU 26 A LEU 27 n 27 LEU 27 A ARG 28 n 28 ARG 28 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ALA 13 -103.28 -61.14 2 A ALA 13 -103.08 -61.16 2 A ARG 18 -113.89 73.49 3 A ALA 13 -102.61 -61.95 4 A ALA 13 -102.95 -61.17 5 A ALA 13 -102.05 -61.66 6 A ALA 13 -103.03 -61.19 7 A ARG 18 -41.54 103.22 8 A ALA 13 -101.49 -61.11 8 A LEU 27 -143.44 30.03 9 A ALA 13 -102.90 -61.12 10 A ALA 13 -103.10 -61.17 10 A LEU 26 -63.72 -74.92 lowest energy, model 1 Solution Structure of the trans-membrane domain of the NS2A of dengue virus 1 N N A GLY 3 A GLY 3 HELX_P A TYR 8 A TYR 8 1 1 6 A PRO 19 A PRO 19 HELX_P A GLY 24 A GLY 24 1 2 6 VIRAL PROTEIN nonstructural protein, membrane protein, VIRAL PROTEIN Q9YKL3_9FLAV UNP 1 1194 Q9YKL3 DIGMGVTYLALLAAFKVRPTFAAGLLLR 1194 1221 2M0S 1 28 Q9YKL3 A 1 1 28