1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Dutta, S.K.
Serrano, P.
Geralt, M.
Wuthrich, K.
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
NMR structure of the protein BT_0846 from Bacteroides thetaiotaomicron VPI-5482 (NP_809759.1)
10.2210/pdb2m4l/pdb
pdb_00002m4l
11242.321
protein BT_0846
1
man
polymer
no
no
GEDWTELNSNNIIGYWSTGIEGTHKLLSFDEDGTGSFGIYSNATPISFQMFDYKIEEGRIYIYDVYPDEKTPYYLDCKIS
GTTLKVETGSEAGTYKKQK
GEDWTELNSNNIIGYWSTGIEGTHKLLSFDEDGTGSFGIYSNATPISFQMFDYKIEEGRIYIYDVYPDEKTPYYLDCKIS
GTTLKVETGSEAGTYKKQK
A
JCSG-417790
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
VPI-5482
sample
BT_0846
226186
Bacteroides thetaiotaomicron
511693
Escherichia coli
BL21
plasmid
SpeedET
NMR structure of hypothetical protein BT_0846 from Bacteroides thetaiotaomicron VPI-5482 (NP_809759.1)
Joint Center for Structural Genomics
JCSG
PSI:Biology
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
struct_ref_seq_dif
pdbx_database_status
repository
Initial release
Structure summary
Structure summary
Data collection
Database references
Other
1
0
2013-03-27
1
1
2015-02-11
1
2
2015-03-04
1
3
2023-02-01
1
4
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
_pdbx_database_status.status_code_nmr_data
Y
BMRB
Y
RCSB
2013-02-07
REL
REL
REL
REL
1966
453
803
202
508
target function
80
20
4D-HACANH-APSY
5D-HACACONH-APSY
5D-CBCACONH-APSY
2D 1H-15N HSQC
3D 1H-13C NOESY aliphatic
2D 1H-13C HSQC aromatic
3D 1H-15N NOESY
1.2
mM
[U-99% 13C; U-99% 15N]
20
mM
50
mM
5
mM
0.798
6.0
ambient
298
K
molecular dynamics
1
closest to the average
1.2 mM [U-99% 13C; U-99% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide, 90% H2O/10% D2O
90% H2O/10% D2O
Bruker Biospin
collection
TopSpin
3.1
Bruker Biospin
processing
TopSpin
3.1
Keller and Wuthrich
chemical shift assignment
CARA
Keller and Wuthrich
data analysis
CARA
Guntert, Mumenthaler and Wuthrich
structure solution
CYANA
3.0
Herrmann, Guntert and Wuthrich
chemical shift assignment
jUNIO
Herrmann, Guntert and Wuthrich
structure solution
jUNIO
Herrmann, Guntert and Wuthrich
peak picking
jUNIO
Luginbuhl, Guntert, Billeter and Wuthrich
refinement
OPAL
600
Bruker
AVANCE
Bruker Avance
800
Bruker
AVANCE
Bruker Avance
GLY
1
n
1
GLY
1
A
GLU
2
n
2
GLU
2
A
ASP
3
n
3
ASP
3
A
TRP
4
n
4
TRP
4
A
THR
5
n
5
THR
5
A
GLU
6
n
6
GLU
6
A
LEU
7
n
7
LEU
7
A
ASN
8
n
8
ASN
8
A
SER
9
n
9
SER
9
A
ASN
10
n
10
ASN
10
A
ASN
11
n
11
ASN
11
A
ILE
12
n
12
ILE
12
A
ILE
13
n
13
ILE
13
A
GLY
14
n
14
GLY
14
A
TYR
15
n
15
TYR
15
A
TRP
16
n
16
TRP
16
A
SER
17
n
17
SER
17
A
THR
18
n
18
THR
18
A
GLY
19
n
19
GLY
19
A
ILE
20
n
20
ILE
20
A
GLU
21
n
21
GLU
21
A
GLY
22
n
22
GLY
22
A
THR
23
n
23
THR
23
A
HIS
24
n
24
HIS
24
A
LYS
25
n
25
LYS
25
A
LEU
26
n
26
LEU
26
A
LEU
27
n
27
LEU
27
A
SER
28
n
28
SER
28
A
PHE
29
n
29
PHE
29
A
ASP
30
n
30
ASP
30
A
GLU
31
n
31
GLU
31
A
ASP
32
n
32
ASP
32
A
GLY
33
n
33
GLY
33
A
THR
34
n
34
THR
34
A
GLY
35
n
35
GLY
35
A
SER
36
n
36
SER
36
A
PHE
37
n
37
PHE
37
A
GLY
38
n
38
GLY
38
A
ILE
39
n
39
ILE
39
A
TYR
40
n
40
TYR
40
A
SER
41
n
41
SER
41
A
ASN
42
n
42
ASN
42
A
ALA
43
n
43
ALA
43
A
THR
44
n
44
THR
44
A
PRO
45
n
45
PRO
45
A
ILE
46
n
46
ILE
46
A
SER
47
n
47
SER
47
A
PHE
48
n
48
PHE
48
A
GLN
49
n
49
GLN
49
A
MET
50
n
50
MET
50
A
PHE
51
n
51
PHE
51
A
ASP
52
n
52
ASP
52
A
TYR
53
n
53
TYR
53
A
LYS
54
n
54
LYS
54
A
ILE
55
n
55
ILE
55
A
GLU
56
n
56
GLU
56
A
GLU
57
n
57
GLU
57
A
GLY
58
n
58
GLY
58
A
ARG
59
n
59
ARG
59
A
ILE
60
n
60
ILE
60
A
TYR
61
n
61
TYR
61
A
ILE
62
n
62
ILE
62
A
TYR
63
n
63
TYR
63
A
ASP
64
n
64
ASP
64
A
VAL
65
n
65
VAL
65
A
TYR
66
n
66
TYR
66
A
PRO
67
n
67
PRO
67
A
ASP
68
n
68
ASP
68
A
GLU
69
n
69
GLU
69
A
LYS
70
n
70
LYS
70
A
THR
71
n
71
THR
71
A
PRO
72
n
72
PRO
72
A
TYR
73
n
73
TYR
73
A
TYR
74
n
74
TYR
74
A
LEU
75
n
75
LEU
75
A
ASP
76
n
76
ASP
76
A
CYS
77
n
77
CYS
77
A
LYS
78
n
78
LYS
78
A
ILE
79
n
79
ILE
79
A
SER
80
n
80
SER
80
A
GLY
81
n
81
GLY
81
A
THR
82
n
82
THR
82
A
THR
83
n
83
THR
83
A
LEU
84
n
84
LEU
84
A
LYS
85
n
85
LYS
85
A
VAL
86
n
86
VAL
86
A
GLU
87
n
87
GLU
87
A
THR
88
n
88
THR
88
A
GLY
89
n
89
GLY
89
A
SER
90
n
90
SER
90
A
GLU
91
n
91
GLU
91
A
ALA
92
n
92
ALA
92
A
GLY
93
n
93
GLY
93
A
THR
94
n
94
THR
94
A
TYR
95
n
95
TYR
95
A
LYS
96
n
96
LYS
96
A
LYS
97
n
97
LYS
97
A
GLN
98
n
98
GLN
98
A
LYS
99
n
99
LYS
99
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TYR
73
A
O
TYR
73
A
N
ILE
62
A
N
ILE
62
A
O
TYR
61
A
O
TYR
61
A
N
LYS
54
A
N
LYS
54
A
O
PHE
51
A
O
PHE
51
A
N
GLY
35
A
N
GLY
35
A
O
GLY
38
A
O
GLY
38
A
N
LEU
26
A
N
LEU
26
A
O
PHE
29
A
O
PHE
29
A
N
GLY
14
A
N
GLY
14
A
N
SER
17
A
N
SER
17
A
O
LYS
96
A
O
LYS
96
A
O
TYR
95
A
O
TYR
95
A
N
LEU
84
A
N
LEU
84
A
O
LYS
85
A
O
LYS
85
A
N
LYS
78
A
N
LYS
78
11
A
A
OE2
HH
GLU
TYR
91
95
1.56
12
A
A
OE1
HH
GLU
TYR
91
95
1.54
13
A
A
OE2
HH
GLU
TYR
91
95
1.57
17
A
A
OE1
HH
GLU
TYR
91
95
1.49
20
A
A
OD2
HH
ASP
TYR
52
63
1.56
6
A
A
GLU
ASP
2
3
-149.16
17
A
A
GLU
GLY
21
22
149.94
18
A
A
LYS
ILE
54
55
149.60
19
A
A
SER
GLY
80
81
-149.14
1
A
TYR
40
0.085
SIDE CHAIN
1
A
TYR
53
0.066
SIDE CHAIN
1
A
ARG
59
0.118
SIDE CHAIN
3
A
TYR
53
0.079
SIDE CHAIN
3
A
TYR
63
0.076
SIDE CHAIN
4
A
TYR
53
0.167
SIDE CHAIN
4
A
ARG
59
0.145
SIDE CHAIN
5
A
TYR
66
0.074
SIDE CHAIN
6
A
ARG
59
0.100
SIDE CHAIN
6
A
TYR
73
0.088
SIDE CHAIN
7
A
ARG
59
0.089
SIDE CHAIN
7
A
TYR
66
0.075
SIDE CHAIN
8
A
TYR
15
0.080
SIDE CHAIN
8
A
TYR
66
0.089
SIDE CHAIN
9
A
TYR
95
0.113
SIDE CHAIN
10
A
TYR
63
0.077
SIDE CHAIN
12
A
TYR
95
0.102
SIDE CHAIN
13
A
TYR
95
0.112
SIDE CHAIN
14
A
TYR
61
0.071
SIDE CHAIN
14
A
TYR
95
0.066
SIDE CHAIN
16
A
TYR
15
0.081
SIDE CHAIN
16
A
TYR
61
0.074
SIDE CHAIN
17
A
ARG
59
0.115
SIDE CHAIN
17
A
TYR
66
0.079
SIDE CHAIN
17
A
TYR
95
0.091
SIDE CHAIN
18
A
TYR
53
0.073
SIDE CHAIN
18
A
ARG
59
0.079
SIDE CHAIN
19
A
TYR
53
0.068
SIDE CHAIN
19
A
TYR
95
0.072
SIDE CHAIN
20
A
TYR
53
0.075
SIDE CHAIN
20
A
TYR
66
0.074
SIDE CHAIN
20
-3.64
0.60
121.00
117.36
A
A
A
CB
CG
CD2
TYR
TYR
TYR
15
15
15
N
1
A
THR
18
-93.58
-66.17
1
A
ASN
42
44.95
-73.07
1
A
ALA
43
-144.16
43.71
1
A
GLU
57
-165.73
14.04
1
A
TYR
63
-160.60
1.31
1
A
SER
80
-141.44
-9.35
2
A
GLU
2
-153.95
87.12
2
A
ASN
42
44.48
-75.41
2
A
ALA
43
-145.31
47.77
2
A
GLU
57
-163.72
14.10
2
A
TYR
63
-151.15
-8.94
2
A
SER
80
-149.31
43.51
2
A
ALA
92
-59.02
105.21
3
A
SER
9
-69.31
40.99
3
A
ASN
10
-134.26
-59.61
3
A
ASN
42
45.02
-81.54
3
A
ALA
43
-141.67
43.54
3
A
GLU
57
-164.41
14.35
3
A
TYR
63
-156.52
-2.69
3
A
SER
80
-128.38
-66.10
3
A
ALA
92
-54.96
108.45
3
A
LYS
97
62.43
156.03
3
A
GLN
98
-143.11
47.20
4
A
ASN
42
53.06
-78.05
4
A
ALA
43
-140.94
21.09
4
A
GLU
56
-152.66
45.90
4
A
GLU
57
-177.95
14.49
4
A
TYR
63
-159.36
-2.62
4
A
SER
80
-141.68
-6.98
4
A
ALA
92
-46.40
101.61
4
A
LYS
97
68.16
142.42
5
A
GLU
2
-69.73
75.54
5
A
ASN
42
44.64
-78.37
5
A
GLU
57
-165.76
14.28
5
A
TYR
63
-154.74
-1.14
5
A
ALA
92
-53.60
108.73
5
A
GLN
98
-116.50
56.67
6
A
GLU
2
-153.30
75.46
6
A
ASP
3
-117.47
65.57
6
A
ASP
32
-144.09
32.09
6
A
ASN
42
54.13
-78.47
6
A
ALA
43
-143.21
47.97
6
A
GLU
57
-164.88
14.66
6
A
ARG
59
-121.37
-165.73
6
A
TYR
63
-158.31
-5.01
7
A
ASN
42
48.75
-76.38
7
A
GLU
57
-170.43
13.73
7
A
TYR
63
-160.97
-17.51
7
A
ALA
92
-58.14
105.45
7
A
GLN
98
-113.76
65.14
8
A
ASP
3
-108.52
60.64
8
A
ILE
12
-84.45
41.58
8
A
ASN
42
68.63
-64.68
8
A
ALA
43
-158.06
49.75
8
A
PHE
48
-174.74
118.15
8
A
GLU
57
-170.01
14.40
8
A
TYR
63
-160.87
6.00
8
A
SER
80
-151.45
26.06
9
A
ASP
3
-116.54
51.64
9
A
ILE
20
-140.26
13.78
9
A
ASN
42
53.36
-78.28
9
A
ALA
43
-146.35
34.80
9
A
GLU
57
-174.27
14.93
9
A
TYR
63
-156.51
-5.24
9
A
ALA
92
-56.22
105.84
10
A
ASN
10
-130.38
-40.28
10
A
ILE
13
-55.74
97.37
10
A
ALA
43
-159.74
49.32
10
A
GLU
57
-173.33
21.59
10
A
TYR
63
-158.25
-5.43
10
A
SER
80
-128.64
-61.92
10
A
ALA
92
-58.10
103.53
10
A
GLN
98
-101.26
55.16
11
A
SER
9
-69.08
36.02
11
A
ASN
10
-137.78
-58.18
11
A
THR
18
-89.84
-77.16
11
A
ASN
42
55.24
-73.05
11
A
ALA
43
-143.24
44.24
11
A
GLU
57
-165.52
15.10
11
A
TYR
63
-160.08
6.96
11
A
SER
80
-151.39
48.81
11
A
ALA
92
-54.68
105.17
12
A
ASN
42
62.86
-83.58
12
A
ALA
43
-150.40
59.98
12
A
GLU
57
-174.90
14.98
12
A
TYR
63
-157.49
8.57
12
A
ALA
92
-56.14
109.24
13
A
ASN
42
46.77
-85.20
13
A
GLU
57
-163.14
14.01
13
A
TYR
63
-154.06
8.29
13
A
SER
80
-152.37
77.53
13
A
LYS
97
61.76
159.28
14
A
ILE
13
-57.02
109.58
14
A
THR
18
-137.27
-40.03
14
A
ASN
42
43.42
-80.46
14
A
GLU
57
-164.25
13.51
14
A
TYR
63
-150.25
-1.45
14
A
ALA
92
-47.48
109.87
15
A
ASN
42
55.24
-85.95
15
A
GLU
57
-166.71
14.13
15
A
TYR
63
-158.62
2.59
15
A
THR
71
-49.81
150.53
16
A
SER
9
-74.04
33.89
16
A
ASN
10
-143.76
-32.44
16
A
ILE
13
-59.83
104.57
16
A
ASN
42
58.72
-57.74
16
A
ALA
43
-154.94
25.30
16
A
GLU
57
-164.67
13.73
16
A
ASP
64
-169.40
100.46
16
A
SER
80
-153.40
46.50
16
A
ALA
92
-53.45
109.57
16
A
GLN
98
-145.26
20.66
17
A
SER
9
-64.07
21.14
17
A
ASN
10
-137.83
-52.13
17
A
ASN
42
45.89
-78.91
17
A
GLU
57
-169.73
14.27
17
A
TYR
63
-156.41
-2.61
18
A
ASN
42
51.73
-65.19
18
A
ALA
43
-153.62
36.23
18
A
TYR
53
-173.16
135.04
18
A
GLU
57
-166.60
14.92
18
A
TYR
63
-158.26
-0.19
18
A
SER
80
-159.26
45.75
18
A
ALA
92
-57.60
104.99
19
A
SER
9
-69.27
25.10
19
A
ASN
10
-134.63
-53.64
19
A
ASN
42
44.85
-81.46
19
A
ALA
43
-143.01
54.25
19
A
GLU
57
-164.74
14.70
19
A
TYR
63
-160.63
2.34
19
A
THR
82
-51.97
7.40
19
A
ALA
92
-51.71
108.03
20
A
SER
9
-75.95
43.16
20
A
ASN
10
-150.21
-50.83
20
A
ASN
42
61.96
-75.73
20
A
ALA
43
-147.08
34.57
20
A
GLU
57
-174.71
14.56
20
A
TYR
63
-158.08
-5.51
20
A
SER
80
-147.75
19.58
20
A
ALA
92
-46.52
108.81
20
A
GLN
98
-143.81
38.27
closest to the average, model2
NMR structure of the protein BT_0846 from Bacteroides thetaiotaomicron VPI-5482 (NP_809759.1)
1
N
N
Structural Genomics, Unknown Function
human gut microbiome secreted protein, Structural Genomics, Unknown Function, PSI-biology, Joint Center for Structural Genomics, JCSG
A
TYR
66
A
TYR
66
1
A
PRO
67
A
PRO
67
-8.49
A
TYR
66
A
TYR
66
2
A
PRO
67
A
PRO
67
-9.05
A
TYR
66
A
TYR
66
3
A
PRO
67
A
PRO
67
-7.25
A
TYR
66
A
TYR
66
4
A
PRO
67
A
PRO
67
4.08
A
TYR
66
A
TYR
66
5
A
PRO
67
A
PRO
67
-14.38
A
TYR
66
A
TYR
66
6
A
PRO
67
A
PRO
67
-9.92
A
TYR
66
A
TYR
66
7
A
PRO
67
A
PRO
67
-2.66
A
TYR
66
A
TYR
66
8
A
PRO
67
A
PRO
67
-3.00
A
TYR
66
A
TYR
66
9
A
PRO
67
A
PRO
67
-4.21
A
TYR
66
A
TYR
66
10
A
PRO
67
A
PRO
67
-11.52
A
TYR
66
A
TYR
66
11
A
PRO
67
A
PRO
67
-3.10
A
TYR
66
A
TYR
66
12
A
PRO
67
A
PRO
67
-6.09
A
TYR
66
A
TYR
66
13
A
PRO
67
A
PRO
67
-10.70
A
TYR
66
A
TYR
66
14
A
PRO
67
A
PRO
67
-5.97
A
TYR
66
A
TYR
66
15
A
PRO
67
A
PRO
67
-8.36
A
TYR
66
A
TYR
66
16
A
PRO
67
A
PRO
67
-6.14
A
TYR
66
A
TYR
66
17
A
PRO
67
A
PRO
67
-7.98
A
TYR
66
A
TYR
66
18
A
PRO
67
A
PRO
67
0.98
A
TYR
66
A
TYR
66
19
A
PRO
67
A
PRO
67
-10.99
A
TYR
66
A
TYR
66
20
A
PRO
67
A
PRO
67
1.62
Q8A9G9_BACTN
UNP
1
22
Q8A9G9
EDWTELNSNNIIGYWSTGIEGTHKLLSFDEDGTGSFGIYSNATPISFQMFDYKIEEGRIYIYDVYPDEKTPYYLDCKISG
TTLKVETGSEAGTYKKQK
22
119
2M4L
2
99
Q8A9G9
A
1
2
99
1
expression tag
GLY
1
2M4L
A
Q8A9G9
UNP
1
9
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
73
A
TYR
73
A
LEU
75
A
LEU
75
A
ILE
60
A
ILE
60
A
TYR
66
A
TYR
66
A
THR
44
A
THR
44
A
LYS
54
A
LYS
54
A
GLY
35
A
GLY
35
A
SER
41
A
SER
41
A
LYS
25
A
LYS
25
A
PHE
29
A
PHE
29
A
GLY
14
A
GLY
14
A
SER
17
A
SER
17
A
TYR
95
A
TYR
95
A
LYS
97
A
LYS
97
A
THR
83
A
THR
83
A
VAL
86
A
VAL
86
A
CYS
77
A
CYS
77
A
ILE
79
A
ILE
79