1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Sonti, R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C11 H12 N2 O2 204.225 D-TRYPTOPHAN D-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N C N 7 N O N 8 N O N 9 N O N 10 N H N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N N N 18 R C N 19 N C N 20 N O N 21 N C N 22 N S N 23 N O N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N N N 32 R C N 33 N C Y 34 N C Y 35 N C Y 36 N N Y 37 N C Y 38 N C Y 39 N C Y 40 N C Y 41 N C Y 42 N C N 43 N C N 44 N O N 45 N O N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 N C N 60 N C N 61 N O N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N N N 69 S C N 70 N C N 71 N O N 72 N C N 73 N C N 74 N C N 75 N O N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N N N 86 S C N 87 N C N 88 N O N 89 N C Y 90 N C Y 91 N C Y 92 N C Y 93 N N Y 94 N C Y 95 N C Y 96 N C Y 97 N C Y 98 N C N 99 N O N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N doub N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N doub N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing Y 38 N doub Y 39 N sing Y 40 N sing N 41 N sing Y 42 N sing N 43 N sing Y 44 N doub Y 45 N sing Y 46 N sing N 47 N sing Y 48 N doub N 49 N sing Y 50 N sing N 51 N sing Y 52 N doub N 53 N sing N 54 N doub N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing Y 94 N doub Y 95 N sing Y 96 N sing N 97 N sing Y 98 N doub Y 99 N sing Y 100 N sing N 101 N sing Y 102 N sing Y 103 N doub N 104 N sing Y 105 N doub N 106 N sing Y 107 N sing N 108 N sing N 109 N sing N 110 N sing GE Chemistry 0947-6539 19 15175 15189 10.1002/chem.201301722 24115170 Conformational diversity in contryphans from Conus venom: cis-trans isomerisation and aromatic/proline interactions in the 23-membered ring of a 7-residue peptide disulfide loop. 2013 10.2210/pdb2m6g/pdb pdb_00002m6g 963.090 Contryphan-Lo 1 syn polymer Lo959 no yes GCP(DTR)DPWC GCPWDPWC A polypeptide(L) n n n n n n n n citation database_2 pdbx_nmr_spectrometer struct_conn struct_site pdbx_database_status chem_comp_atom chem_comp_bond repository Initial release Data collection Database references Derived calculations Other Data collection 1 0 2013-10-30 1 1 2022-08-24 1 2 2023-06-14 1 3 2023-11-15 _citation.journal_volume _citation.page_first _citation.page_last _citation.title _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_spectrometer.model _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _pdbx_database_status.status_code_nmr_data BMRB Y PDBJ 2013-03-29 REL REL REL REL 410709 Cone snail Conus loroisii sample structures with the lowest energy 100 10 1 2D 1H-1H TOCSY 2D 1H-13C HSQC aliphatic 2D 1H-13C HSQC aromatic 2D 1H-1H NOESY 2 mM 303 K torsion angle dynamics 1 with the good disulfide sidechain dihedral angle constraint 2 mM TSP-1, 90% H2O/10% D2O 90% H2O/10% D2O Guntert, Mumenthaler and Wuthrich structure solution CYANA 3 refinement CYANA 500 Bruker AVANCE Bruker Avance GLY 1 n 1 GLY 1 A CYS 2 n 2 CYS 2 A PRO 3 n 3 PRO 3 A DTR 4 n 4 DTR 4 A ASP 5 n 5 ASP 5 A PRO 6 n 6 PRO 6 A TRP 7 n 7 TRP 7 A CYS 8 n 8 CYS 8 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 2 -7.80 1.20 103.80 96.00 A A A N CD CG PRO PRO PRO 3 3 3 N 3 -12.13 1.20 103.80 91.67 A A A N CD CG PRO PRO PRO 3 3 3 N 4 -8.89 1.20 103.80 94.91 A A A N CD CG PRO PRO PRO 3 3 3 N 5 -11.51 1.20 103.80 92.29 A A A N CD CG PRO PRO PRO 3 3 3 N 6 -14.95 1.20 103.80 88.85 A A A N CD CG PRO PRO PRO 3 3 3 N 7 -16.23 2.30 105.40 89.17 A A A CB CG CD PRO PRO PRO 3 3 3 N 8 -22.40 2.30 105.40 83.00 A A A CB CG CD PRO PRO PRO 3 3 3 N 8 -19.33 1.20 103.80 84.47 A A A N CD CG PRO PRO PRO 3 3 3 N 9 -22.39 2.30 105.40 83.01 A A A CB CG CD PRO PRO PRO 3 3 3 N 9 -19.34 1.20 103.80 84.46 A A A N CD CG PRO PRO PRO 3 3 3 N 10 -22.43 2.30 105.40 82.97 A A A CB CG CD PRO PRO PRO 3 3 3 N 10 -19.30 1.20 103.80 84.50 A A A N CD CG PRO PRO PRO 3 3 3 N 3 A A CG CD PRO PRO 3 3 0.223 0.027 1.512 1.735 N 5 A A CG CD PRO PRO 3 3 0.197 0.027 1.512 1.709 N 5 A A CG CD PRO PRO 6 6 0.241 0.033 1.502 1.743 N 6 A A CG CD PRO PRO 3 3 0.353 0.027 1.512 1.865 N 7 A A CG CD PRO PRO 3 3 0.426 0.027 1.512 1.938 N 8 A A CG CD PRO PRO 3 3 0.591 0.027 1.512 2.103 N 9 A A CG CD PRO PRO 3 3 0.591 0.027 1.512 2.103 N 10 A A CG CD PRO PRO 3 3 0.591 0.027 1.512 2.103 N 1 A DTR 4 148.72 -56.59 2 A DTR 4 147.68 -56.10 3 A DTR 4 144.32 -54.26 4 A DTR 4 146.06 -55.19 5 A DTR 4 145.43 -54.87 6 A DTR 4 145.78 -55.00 7 A DTR 4 140.83 -54.06 8 A DTR 4 148.98 -56.82 9 A DTR 4 145.68 -54.94 with the good disulfide sidechain dihedral angle constraint, model1 Solution structure of cis(C2-P3) trans (D5-P6) form of lO959 in water 1 N N disulf 2.100 A CYS 2 A SG CYS 2 1_555 A CYS 8 A SG CYS 8 1_555 covale 1.325 both A PRO 3 A C PRO 3 1_555 A DTR 4 A N DTR 4 1_555 covale 1.328 both A DTR 4 A C DTR 4 1_555 A ASP 5 A N ASP 5 1_555 TOXIN Lo959, water, TOXIN A CYS 2 A CYS 2 1 A PRO 3 A PRO 3 0.02 A CYS 2 A CYS 2 2 A PRO 3 A PRO 3 0.00 A CYS 2 A CYS 2 3 A PRO 3 A PRO 3 -0.10 A CYS 2 A CYS 2 4 A PRO 3 A PRO 3 -0.10 A CYS 2 A CYS 2 5 A PRO 3 A PRO 3 0.02 A CYS 2 A CYS 2 6 A PRO 3 A PRO 3 -0.02 A CYS 2 A CYS 2 7 A PRO 3 A PRO 3 -0.06 A CYS 2 A CYS 2 8 A PRO 3 A PRO 3 -0.02 A CYS 2 A CYS 2 9 A PRO 3 A PRO 3 -0.04 A CYS 2 A CYS 2 10 A PRO 3 A PRO 3 -0.06 COW_CONLO UNP 1 1 P0C250 GCP(DTR)DPWC 1 8 2M6G 1 8 P0C250 A 1 1 8 BINDING SITE FOR RESIDUE DTR A 4 A DTR 4 Software 4 A PRO 3 A PRO 3 4 1_555 A ASP 5 A ASP 5 4 1_555 A PRO 6 A PRO 6 4 1_555 A CYS 8 A CYS 8 4 1_555