1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Cornilescu, C.C. Porter, F.W. Zhao, K.Q. Davis, V. Palmenberg, A.C. Markley, J.L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 S C N 163 N C N 164 N C N 165 N C N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 S C N 182 N C N 183 N O N 184 N C N 185 N C N 186 N C N 187 N C N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N N N 203 S C N 204 N C N 205 N O N 206 N C N 207 N C N 208 N C N 209 N C N 210 N N N 211 N O N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 S C N 229 N C N 230 N O N 231 N C N 232 N C N 233 N S N 234 N C N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C Y 252 N C Y 253 N C Y 254 N C Y 255 N C Y 256 N C Y 257 N C N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 N C N 275 N C N 276 N C N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N O N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 R C N 306 N O N 307 N C N 308 N O N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 N C Y 323 N C Y 324 N C Y 325 N C Y 326 N N Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C Y 350 N C Y 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N C N 356 N O N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C N 374 N C N 375 N C N 376 N O N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing Y 246 N doub Y 247 N sing Y 248 N sing N 249 N sing Y 250 N doub N 251 N sing Y 252 N doub N 253 N sing Y 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing Y 315 N doub Y 316 N sing Y 317 N sing N 318 N sing Y 319 N doub Y 320 N sing Y 321 N sing N 322 N sing Y 323 N sing Y 324 N doub N 325 N sing Y 326 N doub N 327 N sing Y 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing To be Published 0353 Full Length Mengovirus Leader 10.2210/pdb2m7y/pdb pdb_00002m7y 10.13018/BMR19084 8262.046 Leader peptide 1 man polymer 65.409 ZINC ION 1 syn non-polymer no no GSTAMATTMEQEICAHSMTFEECPKCSALQYRNGFYLLKYDEEWYPEELLTDGEDDVFDPDLDMEVVFETQ GSTAMATTMEQEICAHSMTFEECPKCSALQYRNGFYLLKYDEEWYPEELLTDGEDDVFDPDLDMEVVFETQ A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 12107 Mengo virus 562 Escherichia coli pET41b database_2 pdbx_database_status pdbx_nmr_software pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond database_2 repository Initial release Data collection Database references Derived calculations Other Data collection Database references 1 0 2013-10-23 1 1 2023-06-14 1 2 2024-05-15 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _database_2.pdbx_DOI BMRB Y RCSB 2013-05-02 REL REL REL REL ZN ZINC ION structures with the lowest energy 20 1 2D 1H-15N HSQC 2D 1H-13C HSQC 3D HNCO 3D HNCACB 3D CBCA(CO)NH 3D C(CO)NH 3D H(CCO)NH 3D HCCH-TOCSY 3D 1H-15N NOESY 3D 1H-13C NOESY 2D-(HB)CB(CGCD)HD 2D-(HB)CB(CGCDCE)HE 0.7-1 mM [U-13C; U-15N] 100 7.0 ambient 298 K molecular dynamics 1 lowest energy 0.7-1 mM [U-13C; U-15N] protein, 93% H2O/7% D2O 93% H2O/7% D2O Varian collection VNMR Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRPipe Garrett data analysis PIPP Garrett peak picking PIPP Garrett chemical shift assignment PIPP Guntert, Mumenthaler and Wuthrich structure solution CYANA Schwieters, Kuszewski, Tjandra and Clore structure solution X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore geometry optimization X-PLOR NIH Schwieters, Kuszewski, Tjandra and Clore refinement X-PLOR NIH 600 Varian INOVA Varian INOVA 900 Varian INOVA Varian INOVA CYZ 14 2 ZN ZN 101 A GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A THR 3 n 3 THR 3 A ALA 4 n 4 ALA 4 A MET 5 n 5 MET 5 A ALA 6 n 6 ALA 6 A THR 7 n 7 THR 7 A THR 8 n 8 THR 8 A MET 9 n 9 MET 9 A GLU 10 n 10 GLU 10 A GLN 11 n 11 GLN 11 A GLU 12 n 12 GLU 12 A ILE 13 n 13 ILE 13 A CYZ 14 n 14 CYS 14 A ALA 15 n 15 ALA 15 A HIS 16 n 16 HIS 16 A SER 17 n 17 SER 17 A MET 18 n 18 MET 18 A THR 19 n 19 THR 19 A PHE 20 n 20 PHE 20 A GLU 21 n 21 GLU 21 A GLU 22 n 22 GLU 22 A CYS 23 n 23 CYS 23 A PRO 24 n 24 PRO 24 A LYS 25 n 25 LYS 25 A CYS 26 n 26 CYS 26 A SER 27 n 27 SER 27 A ALA 28 n 28 ALA 28 A LEU 29 n 29 LEU 29 A GLN 30 n 30 GLN 30 A TYR 31 n 31 TYR 31 A ARG 32 n 32 ARG 32 A ASN 33 n 33 ASN 33 A GLY 34 n 34 GLY 34 A PHE 35 n 35 PHE 35 A TYR 36 n 36 TYR 36 A LEU 37 n 37 LEU 37 A LEU 38 n 38 LEU 38 A LYS 39 n 39 LYS 39 A TYR 40 n 40 TYR 40 A ASP 41 n 41 ASP 41 A GLU 42 n 42 GLU 42 A GLU 43 n 43 GLU 43 A TRP 44 n 44 TRP 44 A TYR 45 n 45 TYR 45 A PRO 46 n 46 PRO 46 A GLU 47 n 47 GLU 47 A GLU 48 n 48 GLU 48 A LEU 49 n 49 LEU 49 A LEU 50 n 50 LEU 50 A THR 51 n 51 THR 51 A ASP 52 n 52 ASP 52 A GLY 53 n 53 GLY 53 A GLU 54 n 54 GLU 54 A ASP 55 n 55 ASP 55 A ASP 56 n 56 ASP 56 A VAL 57 n 57 VAL 57 A PHE 58 n 58 PHE 58 A ASP 59 n 59 ASP 59 A PRO 60 n 60 PRO 60 A ASP 61 n 61 ASP 61 A LEU 62 n 62 LEU 62 A ASP 63 n 63 ASP 63 A MET 64 n 64 MET 64 A GLU 65 n 65 GLU 65 A VAL 66 n 66 VAL 66 A VAL 67 n 67 VAL 67 A PHE 68 n 68 PHE 68 A GLU 69 n 69 GLU 69 A THR 70 n 70 THR 70 A GLN 71 n 71 GLN 71 A author_defined_assembly 1 monomeric A CYS 14 A SG CYS 14 1_555 A ZN 101 B ZN ZN 1_555 A HIS 16 A NE2 HIS 16 1_555 83.1 A CYS 14 A SG CYS 14 1_555 A ZN 101 B ZN ZN 1_555 A CYS 23 A SG CYS 23 1_555 109.0 A HIS 16 A NE2 HIS 16 1_555 A ZN 101 B ZN ZN 1_555 A CYS 23 A SG CYS 23 1_555 98.8 A CYS 14 A SG CYS 14 1_555 A ZN 101 B ZN ZN 1_555 A CYS 26 A SG CYS 26 1_555 92.0 A HIS 16 A NE2 HIS 16 1_555 A ZN 101 B ZN ZN 1_555 A CYS 26 A SG CYS 26 1_555 159.2 A CYS 23 A SG CYS 23 1_555 A ZN 101 B ZN ZN 1_555 A CYS 26 A SG CYS 26 1_555 101.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A THR 3 -95.31 -64.99 1 A ALA 6 167.90 -33.21 1 A THR 7 -39.40 -84.37 1 A THR 8 -141.89 -69.42 1 A HIS 16 -87.69 31.82 1 A PRO 24 -75.07 -72.50 1 A GLN 30 87.15 60.28 1 A ASN 33 177.52 47.64 1 A TYR 36 35.38 47.56 1 A TYR 40 -134.45 -46.53 1 A GLU 42 168.18 163.14 1 A GLU 43 -161.09 25.67 1 A TYR 45 -46.37 173.88 1 A GLU 47 169.47 -172.69 1 A GLU 48 -7.33 86.47 1 A LEU 49 -64.10 -176.71 1 A LEU 50 -66.04 74.65 1 A ASP 55 80.11 72.13 1 A ASP 56 175.39 85.83 1 A VAL 57 -109.49 53.12 1 A PHE 58 -45.20 109.58 1 A LEU 62 39.06 57.49 1 A ASP 63 171.58 84.24 1 A MET 64 -145.11 -154.73 1 A GLU 65 -89.78 36.62 1 A VAL 66 166.25 -30.03 1 A VAL 67 -85.82 48.00 1 A GLU 69 171.11 -32.54 1 A THR 70 -71.48 -94.88 lowest energy, model 1 The Mengovirus Leader protein 1 N N 2 N N A THR 19 A THR 19 HELX_P A GLU 22 A GLU 22 5 1 4 A CYS 23 A CYS 23 HELX_P A LEU 29 A LEU 29 1 2 7 metalc 2.303 A CYS 14 A SG CYS 14 1_555 A ZN 101 B ZN ZN 1_555 metalc 2.059 A HIS 16 A NE2 HIS 16 1_555 A ZN 101 B ZN ZN 1_555 metalc 2.308 A CYS 23 A SG CYS 23 1_555 A ZN 101 B ZN ZN 1_555 metalc 2.353 A CYS 26 A SG CYS 26 1_555 A ZN 101 B ZN ZN 1_555 VIRAL PROTEIN cardiovirus, VIRAL PROTEIN POLG_ENMGO UNP 1 1 P12296 MATTMEQEICAHSMTFEECPKCSALQYRNGFYLLKYDEEWYPEELLTDGEDDVFDPDLDMEVVFETQ 1 67 2M7Y 5 71 P12296 A 1 5 71 1 expression tag GLY 1 2M7Y A P12296 UNP 1 1 expression tag SER 2 2M7Y A P12296 UNP 2 1 expression tag THR 3 2M7Y A P12296 UNP 3 1 expression tag ALA 4 2M7Y A P12296 UNP 4 BINDING SITE FOR RESIDUE ZN A 101 A ZN 101 Software 5 A CYS 14 A CYS 14 5 1_555 A HIS 16 A HIS 16 5 1_555 A PHE 20 A PHE 20 5 1_555 A CYS 23 A CYS 23 5 1_555 A CYS 26 A CYS 26 5 1_555