1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Filippov, A.V. Efimov, S.V. Klochkov, V.V. Antzutkin, O.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE J.Biomol.Nmr JBNME9 0800 0925-2738 61 227 234 10.1007/s10858-014-9885-4 25430060 High-resolution NMR structure of the antimicrobial peptide protegrin-2 in the presence of DPC micelles. 2015 10.2210/pdb2muh/pdb pdb_00002muh 1952.426 Protegrin-2 UNP residues 131-146 1 syn polymer PG-2 no no RGGRLCYCRRRFCVCV RGGRLCYCRRRFCVCV A polypeptide(L) n n n n n n n n n n n n n n n n database_2 pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer struct_ref_seq_dif repository Initial release Database references Data collection Database references Other 1 0 2014-12-10 1 1 2015-04-29 1 2 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details BMRB Y RCSB 2014-09-10 REL REL REL REL solid-phase peptide synthesis using amino acids protected by the 9-uorenylmethoxycarbonyl group and with reaction mixture conductivity control. 9823 pigs,swine,wild boar Sus scrofa sample structures with the lowest energy 1000 20 2D 1H-1H NOESY 2D 1H-1H TOCSY 2D 1H-1H COSY 4 mg/mL 20 mg/mL [U-99% 2H] 293 K simulated annealing 1 lowest energy 4 mg/mL PG-2, 20 mg/mL [U-99% 2H] DPC, 90% H2O/10% D2O 90% H2O/10% D2O Goddard chemical shift assignment Sparky Schwieters, Kuszewski, Tjandra and Clore structure solution X-PLOR NIH Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax structure solution NMRPipe Koradi, Billeter and Wuthrich data analysis MOLMOL Bruker Biospin processing TopSpin Schwieters, Kuszewski, Tjandra and Clore refinement X-PLOR NIH 500 Bruker AVANCE Bruker Avance ARG 1 n 1 ARG 1 A GLY 2 n 2 GLY 2 A GLY 3 n 3 GLY 3 A ARG 4 n 4 ARG 4 A LEU 5 n 5 LEU 5 A CYS 6 n 6 CYS 6 A TYR 7 n 7 TYR 7 A CYS 8 n 8 CYS 8 A ARG 9 n 9 ARG 9 A ARG 10 n 10 ARG 10 A ARG 11 n 11 ARG 11 A PHE 12 n 12 PHE 12 A CYS 13 n 13 CYS 13 A VAL 14 n 14 VAL 14 A CYS 15 n 15 CYS 15 A VAL 16 n 16 VAL 16 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ARG 9 A N ARG 9 A O PHE 12 A O PHE 12 1 A ARG 4 -167.52 101.95 1 A ARG 10 57.91 -114.39 2 A ARG 10 63.28 -110.38 3 A ARG 4 -92.66 -99.47 3 A ARG 10 61.92 -126.47 4 A ARG 10 45.42 -120.44 5 A ARG 10 54.57 -102.13 6 A ARG 10 62.61 -100.19 7 A ARG 10 47.58 -103.24 8 A ARG 4 -166.05 97.69 8 A ARG 10 41.74 -124.75 8 A ARG 11 -108.88 49.84 9 A ARG 4 -165.87 109.63 9 A ARG 10 56.03 -117.44 10 A ARG 10 56.09 -114.51 11 A ARG 10 46.42 -113.42 11 A ARG 11 -100.25 43.31 12 A ARG 10 57.95 -117.12 13 A ARG 4 -127.54 -52.31 13 A ARG 9 -111.08 65.98 13 A ARG 10 54.77 -99.49 13 A CYS 13 -174.28 124.73 14 A ARG 4 -152.54 -21.32 14 A LEU 5 -165.36 112.75 14 A ARG 10 44.79 -110.12 15 A ARG 10 46.59 -126.50 15 A ARG 11 -106.15 45.76 16 A ARG 10 54.86 -101.20 17 A ARG 10 64.65 -115.26 18 A ARG 10 47.89 -127.39 19 A ARG 10 52.24 -131.22 19 A ARG 11 -81.60 30.96 20 A ARG 10 44.90 -119.12 High-resolution NMR structure of the protegrin-2 docked to DPC Micelles 1 N N disulf 2.020 A CYS 6 A SG CYS 6 1_555 A CYS 15 A SG CYS 15 1_555 disulf 2.023 A CYS 8 A SG CYS 8 1_555 A CYS 13 A SG CYS 13 1_555 ANTIMICROBIAL PROTEIN Protegrin, ANTIMICROBIAL PROTEIN PG2_PIG UNP 1 131 P32195 RGGRLCYCRRRFCICV 131 146 2MUH 1 16 P32195 A 1 1 16 1 ILE conflict VAL 14 2MUH A P32195 UNP 144 14 2 anti-parallel A CYS 6 A CYS 6 A ARG 9 A ARG 9 A PHE 12 A PHE 12 A CYS 15 A CYS 15