1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Proudfoot, A. Serrano, P. Geralt, M. Wuthrich, K. Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 NMR structure of the protein NP_809137.1 from Bacteroides thetaiotaomicron 10.2210/pdb2mw1/pdb pdb_00002mw1 13189.693 Lipocalin-like protein Residues 18-134 1 man polymer no no GCELSDPDGLADPMKWSKVPSGLKNGELKVEAEGGSSLFACKNYKSFWISSVKEEGKFKENTSYKEFDGGWYLVKIEDNE LKVIINRNETNASRSFTVCVEAGNAFDEFKFVQDAAKQ GCELSDPDGLADPMKWSKVPSGLKNGELKVEAEGGSSLFACKNYKSFWISSVKEEGKFKENTSYKEFDGGWYLVKIEDNE LKVIINRNETNASRSFTVCVEAGNAFDEFKFVQDAAKQ A JCSG-417788 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482 sample BT_0224 226186 Bacteroides thetaiotaomicron VPI-5482 562 Escherichia coli Pspeedet Joint Center for Structural Genomics JCSG PSI:Biology database_2 pdbx_database_status pdbx_nmr_software pdbx_nmr_spectrometer struct_ref_seq_dif repository Initial release Data collection Database references Other 1 0 2014-11-12 1 1 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_ref_seq_dif.details Y BMRB Y RCSB 2014-10-27 REL REL REL REL target function 80 20 2D 1H-15N HSQC 3D 1H-13C NOESY aliphatic 3D 1H-13C NOESY aromatic 3D 1H-15N NOESY APSY 4D-HACANH APSY 5D-CBCACONH APSY 5D-HACACONH 1.2 mM [U-98% 13C; U-98% 15N] 50 mM 20 mM 5 mM 5 mM [U-99% 2H] 0.220 6.0 ambient 298 K molecular dynamics 1 closest to the average 1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide, 5 mM [U-99% 2H] DTT, 95% H2O/5% D2O 95% H2O/5% D2O Herrmann, Guntert and Wuthrich refinement CYANA Luginbuhl, Guntert, Billeter and Wuthrich refinement OPAL Bruker Biospin collection TopSpin Bruker Biospin processing TopSpin Keller and Wuthrich chemical shift assignment CARA Herrmann and Wuthrich chemical shift assignment UNIO Herrmann and Wuthrich structure solution UNIO Maxim Mayzel, Vladislav Orekhov processing MddNMR Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax processing NMRDraw 600 Bruker AVANCE Bruker Avance 800 Bruker AVANCE Bruker Avance GLY 1 n 1 GLY 1 A CYS 2 n 2 CYS 2 A GLU 3 n 3 GLU 3 A LEU 4 n 4 LEU 4 A SER 5 n 5 SER 5 A ASP 6 n 6 ASP 6 A PRO 7 n 7 PRO 7 A ASP 8 n 8 ASP 8 A GLY 9 n 9 GLY 9 A LEU 10 n 10 LEU 10 A ALA 11 n 11 ALA 11 A ASP 12 n 12 ASP 12 A PRO 13 n 13 PRO 13 A MET 14 n 14 MET 14 A LYS 15 n 15 LYS 15 A TRP 16 n 16 TRP 16 A SER 17 n 17 SER 17 A LYS 18 n 18 LYS 18 A VAL 19 n 19 VAL 19 A PRO 20 n 20 PRO 20 A SER 21 n 21 SER 21 A GLY 22 n 22 GLY 22 A LEU 23 n 23 LEU 23 A LYS 24 n 24 LYS 24 A ASN 25 n 25 ASN 25 A GLY 26 n 26 GLY 26 A GLU 27 n 27 GLU 27 A LEU 28 n 28 LEU 28 A LYS 29 n 29 LYS 29 A VAL 30 n 30 VAL 30 A GLU 31 n 31 GLU 31 A ALA 32 n 32 ALA 32 A GLU 33 n 33 GLU 33 A GLY 34 n 34 GLY 34 A GLY 35 n 35 GLY 35 A SER 36 n 36 SER 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A PHE 39 n 39 PHE 39 A ALA 40 n 40 ALA 40 A CYS 41 n 41 CYS 41 A LYS 42 n 42 LYS 42 A ASN 43 n 43 ASN 43 A TYR 44 n 44 TYR 44 A LYS 45 n 45 LYS 45 A SER 46 n 46 SER 46 A PHE 47 n 47 PHE 47 A TRP 48 n 48 TRP 48 A ILE 49 n 49 ILE 49 A SER 50 n 50 SER 50 A SER 51 n 51 SER 51 A VAL 52 n 52 VAL 52 A LYS 53 n 53 LYS 53 A GLU 54 n 54 GLU 54 A GLU 55 n 55 GLU 55 A GLY 56 n 56 GLY 56 A LYS 57 n 57 LYS 57 A PHE 58 n 58 PHE 58 A LYS 59 n 59 LYS 59 A GLU 60 n 60 GLU 60 A ASN 61 n 61 ASN 61 A THR 62 n 62 THR 62 A SER 63 n 63 SER 63 A TYR 64 n 64 TYR 64 A LYS 65 n 65 LYS 65 A GLU 66 n 66 GLU 66 A PHE 67 n 67 PHE 67 A ASP 68 n 68 ASP 68 A GLY 69 n 69 GLY 69 A GLY 70 n 70 GLY 70 A TRP 71 n 71 TRP 71 A TYR 72 n 72 TYR 72 A LEU 73 n 73 LEU 73 A VAL 74 n 74 VAL 74 A LYS 75 n 75 LYS 75 A ILE 76 n 76 ILE 76 A GLU 77 n 77 GLU 77 A ASP 78 n 78 ASP 78 A ASN 79 n 79 ASN 79 A GLU 80 n 80 GLU 80 A LEU 81 n 81 LEU 81 A LYS 82 n 82 LYS 82 A VAL 83 n 83 VAL 83 A ILE 84 n 84 ILE 84 A ILE 85 n 85 ILE 85 A ASN 86 n 86 ASN 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A GLU 89 n 89 GLU 89 A THR 90 n 90 THR 90 A ASN 91 n 91 ASN 91 A ALA 92 n 92 ALA 92 A SER 93 n 93 SER 93 A ARG 94 n 94 ARG 94 A SER 95 n 95 SER 95 A PHE 96 n 96 PHE 96 A THR 97 n 97 THR 97 A VAL 98 n 98 VAL 98 A CYS 99 n 99 CYS 99 A VAL 100 n 100 VAL 100 A GLU 101 n 101 GLU 101 A ALA 102 n 102 ALA 102 A GLY 103 n 103 GLY 103 A ASN 104 n 104 ASN 104 A ALA 105 n 105 ALA 105 A PHE 106 n 106 PHE 106 A ASP 107 n 107 ASP 107 A GLU 108 n 108 GLU 108 A PHE 109 n 109 PHE 109 A LYS 110 n 110 LYS 110 A PHE 111 n 111 PHE 111 A VAL 112 n 112 VAL 112 A GLN 113 n 113 GLN 113 A ASP 114 n 114 ASP 114 A ALA 115 n 115 ALA 115 A ALA 116 n 116 ALA 116 A LYS 117 n 117 LYS 117 A GLN 118 n 118 GLN 118 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N SER 17 A N SER 17 A O ALA 40 A O ALA 40 A N PHE 39 A N PHE 39 A O LEU 81 A O LEU 81 A O GLU 80 A O GLU 80 A N GLU 77 A N GLU 77 A O VAL 74 A O VAL 74 A N PHE 67 A N PHE 67 A N LYS 24 A N LYS 24 A O GLU 27 A O GLU 27 A N VAL 30 A N VAL 30 A O VAL 112 A O VAL 112 A O PHE 109 A O PHE 109 A N VAL 98 A N VAL 98 A O CYS 99 A O CYS 99 A N SER 50 A N SER 50 A N VAL 52 A N VAL 52 A O LYS 59 A O LYS 59 1 A A SER SER 50 51 148.40 3 A A GLY CYS 1 2 149.86 3 A A GLU PHE 66 67 138.41 4 A A GLU GLU 54 55 -147.12 4 A A GLU PHE 66 67 144.25 8 A A SER LYS 17 18 143.83 13 A A LYS SER 45 46 -146.79 15 A A PHE THR 96 97 147.82 16 A A GLY CYS 1 2 -138.94 17 A A CYS VAL 99 100 144.69 7 A ARG 94 0.078 SIDE CHAIN 8 A ARG 87 0.141 SIDE CHAIN 11 A ARG 94 0.090 SIDE CHAIN 14 A ARG 87 0.086 SIDE CHAIN 16 A TYR 72 0.075 SIDE CHAIN 16 A ARG 87 0.086 SIDE CHAIN 18 A TYR 44 0.075 SIDE CHAIN 19 A ARG 87 0.077 SIDE CHAIN 1 -3.23 0.50 120.30 117.07 A A A NE CZ NH2 ARG ARG ARG 87 87 87 N 3 9.83 1.50 110.90 120.73 A A A CA CB CG1 VAL VAL VAL 30 30 30 N 6 -3.60 0.50 120.30 116.70 A A A NE CZ NH2 ARG ARG ARG 94 94 94 N 16 14.08 1.50 110.90 124.98 A A A CA CB CG2 VAL VAL VAL 30 30 30 N 1 A CYS 2 55.34 -13.69 1 A ALA 32 -74.18 28.17 1 A GLU 55 -155.30 38.22 1 A ASP 78 58.50 -78.60 1 A ASN 91 -63.79 22.43 2 A ASP 6 -115.59 66.96 2 A LEU 23 -54.60 103.88 2 A ALA 32 -67.30 2.70 2 A GLU 54 -145.66 -6.15 2 A LYS 59 -113.77 -167.16 2 A LYS 65 -155.74 -12.88 2 A ASP 78 58.30 -153.98 2 A GLU 80 -109.95 79.51 3 A GLU 3 -156.46 68.81 3 A ASP 8 -152.05 -11.15 3 A LEU 10 -65.70 -177.72 3 A GLU 54 -143.54 -2.26 3 A GLU 55 -154.15 27.01 3 A LYS 65 -146.86 -9.60 3 A ASN 79 -147.14 25.84 3 A ASN 91 -66.21 2.82 4 A CYS 2 60.43 85.17 4 A GLU 3 56.80 174.85 4 A ASP 6 -149.74 54.50 4 A SER 17 -141.65 15.08 4 A GLU 55 -145.13 14.89 4 A TRP 71 -67.19 0.39 4 A ASP 78 48.85 -84.92 5 A LEU 4 53.54 -154.60 5 A SER 5 -142.43 20.54 5 A ASP 8 -145.18 34.33 5 A SER 46 -179.34 83.80 5 A LYS 59 -113.59 -157.56 5 A ASP 78 44.45 -87.43 5 A LYS 117 -112.60 76.10 6 A GLU 3 54.94 -163.76 6 A ALA 32 -77.25 44.11 6 A ASN 43 -140.21 -7.80 6 A SER 46 175.31 78.22 6 A GLU 55 -149.13 25.38 6 A ASP 78 45.96 -86.14 7 A ASN 43 -140.99 -51.31 7 A SER 46 -162.60 66.76 7 A LYS 65 177.52 -5.33 7 A ASP 78 44.71 -86.51 7 A ASN 79 -141.16 55.19 8 A ASP 6 -119.83 64.12 8 A LYS 45 -142.65 48.41 8 A SER 46 -179.38 85.64 8 A SER 50 -140.76 -8.15 8 A GLU 54 -153.12 -13.71 8 A THR 62 -142.85 -4.49 8 A ASP 78 74.82 -66.60 8 A ASN 91 -92.45 52.12 9 A ASP 6 -113.57 79.54 9 A ALA 32 -80.78 40.51 9 A LYS 45 -81.74 39.63 9 A SER 46 -148.02 32.10 9 A GLU 55 -153.11 46.29 9 A LYS 65 -168.78 -2.19 9 A ASP 78 65.77 -79.71 9 A ASN 79 -147.98 12.12 9 A ALA 102 -136.05 -159.84 10 A ASP 8 -90.50 45.64 10 A LYS 42 -94.57 34.84 10 A ASN 43 -171.07 -6.85 10 A TYR 44 -153.04 82.70 10 A GLU 54 -142.83 -10.75 10 A GLU 55 -147.50 33.56 10 A ASP 78 44.71 -79.92 10 A ASN 79 -154.95 19.22 10 A GLU 89 -82.67 36.96 11 A CYS 2 -136.81 -49.01 11 A GLU 3 62.07 66.08 11 A ASP 8 -159.40 -2.30 11 A LEU 23 -57.82 105.24 11 A ALA 32 -68.46 11.05 11 A LYS 45 -143.38 40.83 11 A SER 46 -150.56 36.61 11 A GLU 55 -147.26 25.53 11 A LYS 65 -162.46 5.14 11 A ASP 78 66.66 -81.78 11 A ASN 91 -64.98 24.10 12 A CYS 2 -154.67 -75.26 12 A GLU 3 63.93 -175.04 12 A ASP 6 -118.92 61.33 12 A ASP 8 -140.67 24.88 12 A ALA 11 -179.32 32.09 12 A LYS 24 -84.61 -154.42 12 A ASN 25 -53.06 21.10 12 A LYS 45 -143.68 58.22 12 A SER 46 -176.18 87.21 12 A GLU 54 -140.50 -7.61 12 A THR 62 -150.56 8.99 12 A LYS 65 -155.02 -18.87 12 A ASP 78 45.23 -86.29 12 A ASN 79 -152.28 2.82 13 A ASN 25 62.71 -27.37 13 A ALA 32 -64.20 32.77 13 A GLU 33 -132.30 -40.41 13 A SER 46 -169.11 47.74 13 A GLU 55 -153.05 46.72 13 A TYR 64 -99.50 31.91 13 A LYS 65 -162.71 -10.87 13 A ASP 78 64.73 -66.61 13 A ASN 79 -160.47 5.67 14 A ASP 8 -159.66 23.58 14 A ASN 25 59.34 12.24 14 A LYS 42 -96.84 36.07 14 A ASN 43 -149.89 -28.98 14 A GLU 55 -150.58 32.17 14 A LYS 59 -130.59 -156.18 14 A LYS 65 -156.20 -35.81 14 A ASP 78 66.49 -76.11 14 A ALA 102 -142.60 39.46 15 A GLU 54 -140.53 -10.41 15 A LYS 59 -123.13 -160.09 15 A THR 62 -143.94 -3.33 15 A SER 63 -170.09 136.05 15 A LYS 65 -143.83 -6.50 15 A ASP 78 54.77 -85.34 15 A LYS 117 -97.26 52.09 16 A CYS 2 66.40 120.50 16 A SER 17 -140.01 23.78 16 A ASN 25 49.73 24.54 16 A ALA 32 -67.81 1.38 16 A SER 46 -151.33 67.65 16 A GLU 54 -156.02 21.82 16 A GLU 55 -157.35 39.34 16 A ASP 78 64.21 -72.26 16 A LYS 117 -118.05 71.00 17 A ASP 6 -115.68 74.38 17 A GLU 55 -148.06 34.45 17 A THR 62 -155.30 -0.13 17 A TRP 71 -69.69 0.30 17 A ASP 78 62.71 -83.83 17 A ASN 79 -147.87 20.60 18 A CYS 2 -125.44 -56.11 18 A LYS 45 -141.36 34.45 18 A SER 46 -172.25 100.08 18 A GLU 54 -142.86 -5.97 18 A GLU 77 -127.68 -164.66 18 A ASN 79 -146.89 -1.44 19 A ASP 8 -166.05 39.73 19 A ALA 32 -74.38 44.10 19 A GLU 33 -140.11 -28.31 19 A SER 46 -176.50 89.61 19 A SER 50 -141.41 -3.72 19 A GLU 55 -153.85 38.88 19 A ASP 78 44.50 -86.31 20 A LEU 10 -70.98 -168.83 20 A SER 17 -142.22 13.39 20 A ASN 25 57.87 17.03 20 A LYS 45 -143.69 30.87 20 A SER 46 -171.32 127.03 20 A GLU 54 -152.57 9.29 20 A GLU 55 -168.21 31.05 20 A LYS 65 -141.09 -4.30 20 A GLU 77 -105.52 -165.84 20 A ASN 79 -147.51 20.89 20 A ASN 104 -75.72 35.28 closest to the average, model6 NMR structure of the protein NP_809137.1 from Bacteroides thetaiotaomicron 1 N N Structural genomics, Unknown Function Structural genomics, Unknown Function, PSI-Biology, Joint Center for Structural Genomics, JCSG Q8AB86_BACTN UNP 1 18 Q8AB86 CELSDPDGLADPMKWSKVPSGLKNGELKVEAEGGSSLFACKNYKSFWISSVKEEGKFKENTSYKEFDGGWYLVKIEDNEL KVIINRNETNASRSFTVCVEAGNAFDEFKFVQDAAKQ 18 134 2MW1 2 118 Q8AB86 A 1 2 118 1 expression tag GLY 1 2MW1 A Q8AB86 UNP 1 5 6 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A TRP 16 A TRP 16 A LYS 18 A LYS 18 A SER 36 A SER 36 A CYS 41 A CYS 41 A GLU 80 A GLU 80 A ILE 84 A ILE 84 A LEU 73 A LEU 73 A GLU 77 A GLU 77 A GLU 66 A GLU 66 A ASP 68 A ASP 68 A LEU 23 A LEU 23 A LYS 24 A LYS 24 A GLU 27 A GLU 27 A VAL 30 A VAL 30 A PHE 106 A PHE 106 A GLN 113 A GLN 113 A ARG 94 A ARG 94 A GLU 101 A GLU 101 A TRP 48 A TRP 48 A LYS 53 A LYS 53 A PHE 58 A PHE 58 A LYS 59 A LYS 59