1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Kumar, D. Jaiswal, N. Raikwal, N. Shukla, V. Arora, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 Prot3DNMR: A simple and swift NMR strategy for Three-Dimentional structutral determination of proteins. 10.2210/pdb2mw5/pdb pdb_00002mw5 11149.545 Small ubiquitin-related modifier 1 1 man polymer SUMO-1, GAP-modifying protein 1, GMP1, SMT3 homolog 3, Sentrin, Ubiquitin-homology domain protein PIC1, Ubiquitin-like protein SMT3C, Smt3C, Ubiquitin-like protein UBL1 no no MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKEL GMEEEDVIEVYQEQTGG MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKEL GMEEEDVIEVYQEQTGG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample SUMO1, SMT3C, SMT3H3, UBL1, OK/SW-cl.43 9606 Homo sapiens 562 Escherichia coli BL21 Lambda DE3 pQE80L vector database_2 pdbx_database_status pdbx_nmr_spectrometer repository Initial release Structure summary Data collection Database references Other 1 0 2014-12-03 1 1 2014-12-10 1 2 2023-06-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_nmr_data _pdbx_nmr_spectrometer.model BMRB Y PDBJ 2014-10-28 REL REL REL REL 509 122 66 66 3.73 target function 200 10 5 6.9 7 1 Talos Plus 0.66 0.13 2D 1H-15N HSQC 3D 1H-15N TOCSY 3D HNCO 3D HNCA 3D H(CCO)NH 3D 1H-13C NOESY 3D 1H-15N NOESY 0.8-1 mM [U-100% 13C; U-100% 15N] 20 6.5 ambient 298 K distance geometry 1 lowest energy 0.8-1 mM [U-100% 13C; U-100% 15N] sodium phosphate-1, 90% H2O/10% D2O 90% H2O/10% D2O Keller and Wuthrich chemical shift assignment CARA 9.8 refinement CYANA 800 Bruker AVANCE Bruker Avance MET 4 n 1 MET 4 A SER 5 n 2 SER 5 A ASP 6 n 3 ASP 6 A GLN 7 n 4 GLN 7 A GLU 8 n 5 GLU 8 A ALA 9 n 6 ALA 9 A LYS 10 n 7 LYS 10 A PRO 11 n 8 PRO 11 A SER 12 n 9 SER 12 A THR 13 n 10 THR 13 A GLU 14 n 11 GLU 14 A ASP 15 n 12 ASP 15 A LEU 16 n 13 LEU 16 A GLY 17 n 14 GLY 17 A ASP 18 n 15 ASP 18 A LYS 19 n 16 LYS 19 A LYS 20 n 17 LYS 20 A GLU 21 n 18 GLU 21 A GLY 22 n 19 GLY 22 A GLU 23 n 20 GLU 23 A TYR 24 n 21 TYR 24 A ILE 25 n 22 ILE 25 A LYS 26 n 23 LYS 26 A LEU 27 n 24 LEU 27 A LYS 28 n 25 LYS 28 A VAL 29 n 26 VAL 29 A ILE 30 n 27 ILE 30 A GLY 31 n 28 GLY 31 A GLN 32 n 29 GLN 32 A ASP 33 n 30 ASP 33 A SER 34 n 31 SER 34 A SER 35 n 32 SER 35 A GLU 36 n 33 GLU 36 A ILE 37 n 34 ILE 37 A HIS 38 n 35 HIS 38 A PHE 39 n 36 PHE 39 A LYS 40 n 37 LYS 40 A VAL 41 n 38 VAL 41 A LYS 42 n 39 LYS 42 A MET 43 n 40 MET 43 A THR 44 n 41 THR 44 A THR 45 n 42 THR 45 A HIS 46 n 43 HIS 46 A LEU 47 n 44 LEU 47 A LYS 48 n 45 LYS 48 A LYS 49 n 46 LYS 49 A LEU 50 n 47 LEU 50 A LYS 51 n 48 LYS 51 A GLU 52 n 49 GLU 52 A SER 53 n 50 SER 53 A TYR 54 n 51 TYR 54 A CYS 55 n 52 CYS 55 A GLN 56 n 53 GLN 56 A ARG 57 n 54 ARG 57 A GLN 58 n 55 GLN 58 A GLY 59 n 56 GLY 59 A VAL 60 n 57 VAL 60 A PRO 61 n 58 PRO 61 A MET 62 n 59 MET 62 A ASN 63 n 60 ASN 63 A SER 64 n 61 SER 64 A LEU 65 n 62 LEU 65 A ARG 66 n 63 ARG 66 A PHE 67 n 64 PHE 67 A LEU 68 n 65 LEU 68 A PHE 69 n 66 PHE 69 A GLU 70 n 67 GLU 70 A GLY 71 n 68 GLY 71 A GLN 72 n 69 GLN 72 A ARG 73 n 70 ARG 73 A ILE 74 n 71 ILE 74 A ALA 75 n 72 ALA 75 A ASP 76 n 73 ASP 76 A ASN 77 n 74 ASN 77 A HIS 78 n 75 HIS 78 A THR 79 n 76 THR 79 A PRO 80 n 77 PRO 80 A LYS 81 n 78 LYS 81 A GLU 82 n 79 GLU 82 A LEU 83 n 80 LEU 83 A GLY 84 n 81 GLY 84 A MET 85 n 82 MET 85 A GLU 86 n 83 GLU 86 A GLU 87 n 84 GLU 87 A GLU 88 n 85 GLU 88 A ASP 89 n 86 ASP 89 A VAL 90 n 87 VAL 90 A ILE 91 n 88 ILE 91 A GLU 92 n 89 GLU 92 A VAL 93 n 90 VAL 93 A TYR 94 n 91 TYR 94 A GLN 95 n 92 GLN 95 A GLU 96 n 93 GLU 96 A GLN 97 n 94 GLN 97 A THR 98 n 95 THR 98 A GLY 99 n 96 GLY 99 A GLY 100 n 97 GLY 100 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 72 A O GLN 69 A N PHE 69 A N PHE 66 A N LEU 68 A N LEU 65 A O GLU 92 A O GLU 89 1 4.43 0.50 120.30 124.73 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 1 3.69 0.50 120.30 123.99 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 1 4.50 0.50 120.30 124.80 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 2 4.15 0.50 120.30 124.45 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 2 3.57 0.50 120.30 123.87 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 2 3.94 0.50 120.30 124.24 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 3 3.86 0.50 120.30 124.16 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 3 3.28 0.50 120.30 123.58 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 3 3.52 0.50 120.30 123.82 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 4 3.10 0.50 120.30 123.40 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 4 3.92 0.50 120.30 124.22 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 4 4.21 0.50 120.30 124.51 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 5 4.06 0.50 120.30 124.36 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 5 4.31 0.50 120.30 124.61 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 6 3.92 0.50 120.30 124.22 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 6 4.47 0.50 120.30 124.77 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 6 4.42 0.50 120.30 124.72 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 7 3.27 0.50 120.30 123.57 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 7 4.13 0.50 120.30 124.43 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 7 4.17 0.50 120.30 124.47 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 8 3.69 0.50 120.30 123.99 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 8 3.53 0.50 120.30 123.83 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 8 4.10 0.50 120.30 124.40 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 9 3.60 0.50 120.30 123.90 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 9 4.03 0.50 120.30 124.33 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 9 4.16 0.50 120.30 124.46 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 10 4.21 0.50 120.30 124.51 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 10 4.62 0.50 120.30 124.92 A A A NE CZ NH1 ARG ARG ARG 66 66 66 N 10 3.27 0.50 120.30 123.57 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 1 A LYS 40 -81.26 40.43 1 A ASN 63 -69.52 0.59 2 A ASP 18 -86.00 49.28 2 A GLU 86 60.02 -40.13 2 A GLU 87 -130.39 -57.65 3 A GLU 21 60.15 -23.39 3 A GLU 87 -148.51 -54.52 4 A GLU 21 57.01 13.87 4 A GLN 32 60.87 -52.16 4 A GLU 86 64.72 -26.96 5 A SER 12 59.10 16.78 5 A GLU 21 56.01 -159.96 5 A GLU 88 62.08 160.75 5 A ASP 89 -134.50 -80.83 6 A GLU 14 63.70 -33.10 6 A GLU 86 61.87 -38.21 7 A SER 12 54.27 18.49 7 A LYS 28 -118.85 72.84 7 A GLU 86 66.58 174.67 8 A ASP 18 59.41 -67.64 8 A LYS 40 -69.88 98.80 8 A GLU 86 62.38 -18.02 9 A GLU 86 61.97 -40.64 10 A LYS 19 64.49 -36.47 10 A GLU 21 56.48 -162.45 10 A GLU 86 38.83 -80.04 10 A GLU 88 56.75 171.53 10 A ASP 89 -147.56 -22.80 lowest energy, model1 Backbone fold of Human Small Ubiquitin like Modifier protein-1 (SUMO-1) based on Prot3D-NMR approach. 1 N N A HIS 46 A HIS 43 HELX_P A GLY 59 A GLY 56 1 1 14 A PRO 61 A PRO 58 HELX_P A ASN 63 A ASN 60 5 2 3 A THR 79 A THR 76 HELX_P A GLY 84 A GLY 81 1 3 6 PROTEIN BINDING human SUMO, Small Ubiquitin like Modifier, SUMO-1, PROTEIN BINDING SUMO1_HUMAN UNP 1 1 P63165 MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKEL GMEEEDVIEVYQEQTGG 1 97 2MW5 4 100 P63165 A 1 1 97 3 anti-parallel anti-parallel A GLN 72 A GLN 69 A ARG 73 A ARG 70 A LEU 65 A LEU 62 A PHE 69 A PHE 66 A GLU 92 A GLU 89 A GLN 95 A GLN 92 1 P 1