1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Serrano, P.
Wuthrich, K.
Beuck, C.
Joint Center for Structural Genomics (JCSG)
Partnership for T-Cell Biology (TCELL)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
NMR structure of the acidic domain of SYNCRIP
10.2210/pdb2mxt/pdb
pdb_00002mxt
9494.643
Heterogeneous nuclear ribonucleoprotein Q
acidic domain (UNP residues 24-107)
1
man
polymer
hnRNP Q, Glycine- and tyrosine-rich RNA-binding protein, GRY-RBP, NS1-associated protein 1, Synaptotagmin-binding, cytoplasmic RNA-interacting protein
no
no
GSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTY
RQREK
GSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTY
RQREK
A
JCSG-430710
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
SYNCRIP, HNRPQ, NSAP1
9606
Homo sapiens
469008
Escherichia coli
BL21(DE3)
plasmid
pET28b
Joint Center for Structural Genomics
JCSG
PSI:Biology
Partnership for T-Cell Biology
TCELL
PSI:Biology
database_2
pdbx_database_status
pdbx_nmr_software
pdbx_nmr_spectrometer
struct_ref_seq_dif
repository
Initial release
Other
Data collection
Database references
Other
1
0
2015-01-21
1
1
2015-06-10
1
2
2023-06-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_nmr_data
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
Y
BMRB
Y
RCSB
2015-01-14
REL
REL
REL
REL
1516
401
274
471
370
target function
40
19
APSY 4D-HACANH
APSY 5D-HACACONH
APSY 5D-CBCACONH
2D 1H-15N HSQC
3D 1H-15N NOESY
3D 1H-13C NOESY aliphatic
3D 1H-13C NOESY aromatic
1.2
mM
[U-99% 13C; U-98% 15N]
20
mM
50
mM
5
mM
0.0798
6.0
ambient
298
K
molecular dynamics
1
lowest energy
1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide, 95% H2O/5% D2O
95% H2O/5% D2O
refinement
OPALp
600
Bruker
AVANCE
Bruker Avance
800
Bruker
AVANCE
Bruker Avance
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
GLU
3
n
3
GLU
3
A
ASN
4
n
4
ASN
4
A
PHE
5
n
5
PHE
5
A
GLN
6
n
6
GLN
6
A
THR
7
n
7
THR
7
A
LEU
8
n
8
LEU
8
A
LEU
9
n
9
LEU
9
A
ASP
10
n
10
ASP
10
A
ALA
11
n
11
ALA
11
A
GLY
12
n
12
GLY
12
A
LEU
13
n
13
LEU
13
A
PRO
14
n
14
PRO
14
A
GLN
15
n
15
GLN
15
A
LYS
16
n
16
LYS
16
A
VAL
17
n
17
VAL
17
A
ALA
18
n
18
ALA
18
A
GLU
19
n
19
GLU
19
A
LYS
20
n
20
LYS
20
A
LEU
21
n
21
LEU
21
A
ASP
22
n
22
ASP
22
A
GLU
23
n
23
GLU
23
A
ILE
24
n
24
ILE
24
A
TYR
25
n
25
TYR
25
A
VAL
26
n
26
VAL
26
A
ALA
27
n
27
ALA
27
A
GLY
28
n
28
GLY
28
A
LEU
29
n
29
LEU
29
A
VAL
30
n
30
VAL
30
A
ALA
31
n
31
ALA
31
A
HIS
32
n
32
HIS
32
A
SER
33
n
33
SER
33
A
ASP
34
n
34
ASP
34
A
LEU
35
n
35
LEU
35
A
ASP
36
n
36
ASP
36
A
GLU
37
n
37
GLU
37
A
ARG
38
n
38
ARG
38
A
ALA
39
n
39
ALA
39
A
ILE
40
n
40
ILE
40
A
GLU
41
n
41
GLU
41
A
ALA
42
n
42
ALA
42
A
LEU
43
n
43
LEU
43
A
LYS
44
n
44
LYS
44
A
GLU
45
n
45
GLU
45
A
PHE
46
n
46
PHE
46
A
ASN
47
n
47
ASN
47
A
GLU
48
n
48
GLU
48
A
ASP
49
n
49
ASP
49
A
GLY
50
n
50
GLY
50
A
ALA
51
n
51
ALA
51
A
LEU
52
n
52
LEU
52
A
ALA
53
n
53
ALA
53
A
VAL
54
n
54
VAL
54
A
LEU
55
n
55
LEU
55
A
GLN
56
n
56
GLN
56
A
GLN
57
n
57
GLN
57
A
PHE
58
n
58
PHE
58
A
LYS
59
n
59
LYS
59
A
ASP
60
n
60
ASP
60
A
SER
61
n
61
SER
61
A
ASP
62
n
62
ASP
62
A
LEU
63
n
63
LEU
63
A
SER
64
n
64
SER
64
A
HIS
65
n
65
HIS
65
A
VAL
66
n
66
VAL
66
A
GLN
67
n
67
GLN
67
A
ASN
68
n
68
ASN
68
A
LYS
69
n
69
LYS
69
A
SER
70
n
70
SER
70
A
ALA
71
n
71
ALA
71
A
PHE
72
n
72
PHE
72
A
LEU
73
n
73
LEU
73
A
CYS
74
n
74
CYS
74
A
GLY
75
n
75
GLY
75
A
VAL
76
n
76
VAL
76
A
MET
77
n
77
MET
77
A
LYS
78
n
78
LYS
78
A
THR
79
n
79
THR
79
A
TYR
80
n
80
TYR
80
A
ARG
81
n
81
ARG
81
A
GLN
82
n
82
GLN
82
A
ARG
83
n
83
ARG
83
A
GLU
84
n
84
GLU
84
A
LYS
85
n
85
LYS
85
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
15
A
A
OD2
HG
ASP
SER
62
64
1.57
15
A
A
O
HG
ASP
SER
34
70
1.59
18
A
A
OD2
HG
ASP
SER
36
70
1.50
19
A
A
OD1
HG
ASP
SER
36
70
1.56
19
A
A
OD1
HG
ASP
SER
62
64
1.57
9
A
A
VAL
ALA
26
27
-144.00
14
A
A
SER
ASP
61
62
-146.94
16
A
A
GLU
LYS
84
85
-146.39
1
A
ARG
38
0.107
SIDE CHAIN
2
A
ARG
83
0.095
SIDE CHAIN
3
A
ARG
83
0.104
SIDE CHAIN
6
A
ARG
81
0.090
SIDE CHAIN
6
A
ARG
83
0.088
SIDE CHAIN
7
A
TYR
25
0.081
SIDE CHAIN
8
A
TYR
25
0.105
SIDE CHAIN
11
A
ARG
38
0.081
SIDE CHAIN
12
A
TYR
25
0.062
SIDE CHAIN
13
A
TYR
25
0.093
SIDE CHAIN
14
A
ARG
38
0.144
SIDE CHAIN
15
A
TYR
25
0.106
SIDE CHAIN
16
A
ARG
38
0.096
SIDE CHAIN
16
A
ARG
81
0.185
SIDE CHAIN
1
A
LEU
29
-94.48
-75.03
1
A
GLU
45
-76.84
34.60
1
A
ASP
60
-76.96
46.49
1
A
LEU
63
-95.59
30.20
1
A
HIS
65
-80.19
39.22
1
A
GLN
67
-142.68
-70.52
1
A
ASN
68
-56.99
75.80
1
A
GLN
82
-101.03
69.37
2
A
GLU
45
-77.12
38.45
3
A
LEU
29
-82.09
-74.59
3
A
ALA
31
-73.17
26.89
3
A
HIS
32
55.46
-21.24
4
A
LEU
29
-71.36
-81.94
4
A
ASP
60
-74.99
49.01
4
A
LEU
63
-76.76
46.33
4
A
GLU
84
-90.63
49.87
5
A
SER
2
-127.16
-165.37
6
A
ALA
11
-68.16
15.81
6
A
GLU
48
-52.14
-70.86
6
A
ARG
83
-140.29
24.69
7
A
ASP
60
-76.55
33.81
7
A
ARG
83
-119.99
64.33
7
A
GLU
84
-115.17
-164.38
8
A
HIS
65
-88.05
31.15
9
A
GLU
48
-44.77
-70.87
9
A
ASP
60
-79.46
46.51
10
A
ALA
11
-86.32
30.29
10
A
ASP
60
-72.75
28.14
10
A
ASP
62
-116.16
79.49
10
A
HIS
65
-106.44
64.08
10
A
ASN
68
-115.18
71.88
11
A
SER
2
-107.65
-167.20
11
A
GLU
45
-69.30
11.99
11
A
ASN
47
-57.18
176.90
11
A
ASP
60
-75.49
48.23
11
A
ARG
83
-105.24
76.11
12
A
ALA
27
-95.06
36.42
12
A
GLU
45
-85.42
43.70
12
A
HIS
65
59.39
10.26
12
A
GLN
67
-54.17
-85.00
12
A
GLU
84
-83.15
30.59
13
A
GLU
3
-74.04
23.52
14
A
LEU
29
-77.59
-85.20
14
A
ASP
60
-80.18
45.22
15
A
SER
2
-140.83
-154.55
15
A
PRO
14
-62.01
-164.42
15
A
LEU
29
-79.70
-83.75
15
A
SER
64
-61.94
83.71
15
A
GLN
82
-107.08
69.44
16
A
GLN
67
-122.32
-85.68
17
A
ASP
34
-73.84
30.66
17
A
GLU
45
-76.73
43.51
17
A
GLU
48
-47.83
-70.99
17
A
ASP
62
-108.46
77.40
17
A
LEU
63
-77.17
49.53
17
A
ARG
81
-72.78
24.71
18
A
GLN
67
-66.82
-83.35
19
A
HIS
32
56.11
-21.77
19
A
SER
64
-59.08
95.58
NMR structure of the acidic domain of SYNCRIP (hnRNPQ)
1
N
N
A
SER
2
A
SER
2
HELX_P
A
ALA
11
A
ALA
11
1
1
10
A
PRO
14
A
PRO
14
HELX_P
A
ALA
27
A
ALA
27
1
2
14
A
ASP
36
A
ASP
36
HELX_P
A
GLU
45
A
GLU
45
1
3
10
A
ASN
47
A
ASN
47
HELX_P
A
ASP
60
A
ASP
60
1
4
14
A
ASN
68
A
ASN
68
HELX_P
A
GLN
82
A
GLN
82
1
5
15
SPLICING
Structural Genomics, PSI-Biology, Acidic domain, SYNCRIP, Splicing factor, SPLICING, Joint Center for Structural Genomics, JCSG, Partnership for T-Cell Biology, TCELL
HNRPQ_HUMAN
UNP
1
24
O60506
SENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYR
QREK
24
107
2MXT
2
85
O60506
A
1
2
85
1
expression tag
GLY
1
2MXT
A
O60506
UNP
1