1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Serrano, P. Wuthrich, K. Beuck, C. Joint Center for Structural Genomics (JCSG) Partnership for T-Cell Biology (TCELL) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be Published 0353 NMR structure of the acidic domain of SYNCRIP 12932.473 Heterogeneous nuclear ribonucleoprotein Q 1 man polymer hnRNP Q, Glycine- and tyrosine-rich RNA-binding protein, GRY-RBP, NS1-associated protein 1, Synaptotagmin-binding, cytoplasmic RNA-interacting protein no no GSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTY RQREKQGTKVADSSKGPDEAKIKALLERTGYTLDVTTG GSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTY RQREKQGTKVADSSKGPDEAKIKALLERTGYTLDVTTG A JCSG-430615 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human sample SYNCRIP, HNRPQ, NSAP1 9606 Homo sapiens 562 Escherichia coli plasmid pET28b Joint Center for Structural Genomics JCSG PSI:Biology Partnership for T-Cell Biology TCELL PSI:Biology repository Initial release 1 0 2016-06-01 Y BMRB Y RCSB 2016-02-02 REL REL REL 1659 471 274 372 449 structures with the least restraint violations 80 19 1 APSY 4D-HACANH APSY 5D-HACACONH APSY 5D-CBCACONH 2D 1H-15N HSQC 3D 1H-15N NOESY 3D 1H-13C NOESY aliphatic 3D 1H-13C NOESY aromatic 1.2 mM [U-99% 13C; U-98% 15N] 20 mM 50 mM 5 mM 0.0798 6.0 ambient 298 K molecular dynamics 1 lowest energy 1.2 mM [U-99% 13C; U-98% 15N] protein, 20 mM sodium phosphate, 50 mM sodium chloride, 5 mM sodium azide, 95% H2O/5% D2O 95% H2O/5% D2O refinement DYANA refinement opalp 600 Bruker Avance Bruker Avance 800 Bruker Avance Bruker Avance GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A GLU 3 n 3 GLU 3 A ASN 4 n 4 ASN 4 A PHE 5 n 5 PHE 5 A GLN 6 n 6 GLN 6 A THR 7 n 7 THR 7 A LEU 8 n 8 LEU 8 A LEU 9 n 9 LEU 9 A ASP 10 n 10 ASP 10 A ALA 11 n 11 ALA 11 A GLY 12 n 12 GLY 12 A LEU 13 n 13 LEU 13 A PRO 14 n 14 PRO 14 A GLN 15 n 15 GLN 15 A LYS 16 n 16 LYS 16 A VAL 17 n 17 VAL 17 A ALA 18 n 18 ALA 18 A GLU 19 n 19 GLU 19 A LYS 20 n 20 LYS 20 A LEU 21 n 21 LEU 21 A ASP 22 n 22 ASP 22 A GLU 23 n 23 GLU 23 A ILE 24 n 24 ILE 24 A TYR 25 n 25 TYR 25 A VAL 26 n 26 VAL 26 A ALA 27 n 27 ALA 27 A GLY 28 n 28 GLY 28 A LEU 29 n 29 LEU 29 A VAL 30 n 30 VAL 30 A ALA 31 n 31 ALA 31 A HIS 32 n 32 HIS 32 A SER 33 n 33 SER 33 A ASP 34 n 34 ASP 34 A LEU 35 n 35 LEU 35 A ASP 36 n 36 ASP 36 A GLU 37 n 37 GLU 37 A ARG 38 n 38 ARG 38 A ALA 39 n 39 ALA 39 A ILE 40 n 40 ILE 40 A GLU 41 n 41 GLU 41 A ALA 42 n 42 ALA 42 A LEU 43 n 43 LEU 43 A LYS 44 n 44 LYS 44 A GLU 45 n 45 GLU 45 A PHE 46 n 46 PHE 46 A ASN 47 n 47 ASN 47 A GLU 48 n 48 GLU 48 A ASP 49 n 49 ASP 49 A GLY 50 n 50 GLY 50 A ALA 51 n 51 ALA 51 A LEU 52 n 52 LEU 52 A ALA 53 n 53 ALA 53 A VAL 54 n 54 VAL 54 A LEU 55 n 55 LEU 55 A GLN 56 n 56 GLN 56 A GLN 57 n 57 GLN 57 A PHE 58 n 58 PHE 58 A LYS 59 n 59 LYS 59 A ASP 60 n 60 ASP 60 A SER 61 n 61 SER 61 A ASP 62 n 62 ASP 62 A LEU 63 n 63 LEU 63 A SER 64 n 64 SER 64 A HIS 65 n 65 HIS 65 A VAL 66 n 66 VAL 66 A GLN 67 n 67 GLN 67 A ASN 68 n 68 ASN 68 A LYS 69 n 69 LYS 69 A SER 70 n 70 SER 70 A ALA 71 n 71 ALA 71 A PHE 72 n 72 PHE 72 A LEU 73 n 73 LEU 73 A CYS 74 n 74 CYS 74 A GLY 75 n 75 GLY 75 A VAL 76 n 76 VAL 76 A MET 77 n 77 MET 77 A LYS 78 n 78 LYS 78 A THR 79 n 79 THR 79 A TYR 80 n 80 TYR 80 A ARG 81 n 81 ARG 81 A GLN 82 n 82 GLN 82 A ARG 83 n 83 ARG 83 A GLU 84 n 84 GLU 84 A LYS 85 n 85 LYS 85 A GLN 86 n 86 GLN 86 A GLY 87 n 87 GLY 87 A THR 88 n 88 THR 88 A LYS 89 n 89 LYS 89 A VAL 90 n 90 VAL 90 A ALA 91 n 91 ALA 91 A ASP 92 n 92 ASP 92 A SER 93 n 93 SER 93 A SER 94 n 94 SER 94 A LYS 95 n 95 LYS 95 A GLY 96 n 96 GLY 96 A PRO 97 n 97 PRO 97 A ASP 98 n 98 ASP 98 A GLU 99 n 99 GLU 99 A ALA 100 n 100 ALA 100 A LYS 101 n 101 LYS 101 A ILE 102 n 102 ILE 102 A LYS 103 n 103 LYS 103 A ALA 104 n 104 ALA 104 A LEU 105 n 105 LEU 105 A LEU 106 n 106 LEU 106 A GLU 107 n 107 GLU 107 A ARG 108 n 108 ARG 108 A THR 109 n 109 THR 109 A GLY 110 n 110 GLY 110 A TYR 111 n 111 TYR 111 A THR 112 n 112 THR 112 A LEU 113 n 113 LEU 113 A ASP 114 n 114 ASP 114 A VAL 115 n 115 VAL 115 A THR 116 n 116 THR 116 A THR 117 n 117 THR 117 A GLY 118 n 118 GLY 118 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A THR GLY 117 118 137.00 2 A A GLY LEU 12 13 -149.14 4 A A GLY LEU 12 13 -143.19 6 A A VAL ALA 30 31 149.72 9 A A GLY SER 1 2 -146.56 9 A A PRO ASP 97 98 137.05 9 A A LEU ASP 113 114 -149.94 9 A A THR GLY 117 118 147.65 10 A A THR GLY 117 118 143.34 11 A A THR LEU 112 113 149.10 12 A A SER SER 93 94 141.83 13 A A THR GLY 117 118 143.60 14 A A PRO ASP 97 98 137.23 17 A A PRO ASP 97 98 149.23 5 A ARG 83 0.086 SIDE CHAIN 6 A ARG 81 0.112 SIDE CHAIN 7 A TYR 80 0.079 SIDE CHAIN 7 A ARG 81 0.101 SIDE CHAIN 8 A ARG 38 0.088 SIDE CHAIN 8 A ARG 81 0.094 SIDE CHAIN 9 A ARG 81 0.086 SIDE CHAIN 10 A TYR 25 0.076 SIDE CHAIN 10 A TYR 80 0.080 SIDE CHAIN 12 A TYR 25 0.085 SIDE CHAIN 15 A ARG 38 0.084 SIDE CHAIN 15 A ARG 83 0.113 SIDE CHAIN 17 A ARG 38 0.152 SIDE CHAIN 18 A TYR 80 0.103 SIDE CHAIN 19 A ARG 81 0.128 SIDE CHAIN 1 A HIS 32 69.12 -41.92 1 A HIS 65 -141.40 41.66 1 A ASN 68 -150.89 83.28 1 A THR 79 -128.56 -51.04 1 A PRO 97 -62.80 -167.30 1 A ASP 98 -58.69 -154.57 1 A GLU 99 67.89 137.28 1 A ALA 100 -160.59 116.08 1 A ILE 102 -60.71 -72.55 1 A LYS 103 53.28 -2.53 1 A TYR 111 -58.76 109.57 2 A GLU 3 -144.04 -46.40 2 A VAL 30 -127.06 -167.30 2 A ALA 31 -140.12 33.03 2 A HIS 32 71.94 -45.15 2 A LEU 43 -99.79 32.38 2 A ASP 62 -78.42 44.15 2 A LYS 85 70.09 -61.53 2 A VAL 90 -111.03 55.72 2 A ALA 91 -146.00 -3.12 2 A SER 94 -165.58 119.58 2 A ALA 100 -148.43 -30.12 2 A ASP 114 -169.52 115.82 3 A HIS 32 67.05 -80.38 3 A SER 33 -82.57 34.83 3 A LEU 43 -73.35 22.61 3 A GLU 45 -118.15 77.15 3 A ASP 60 -90.39 59.49 3 A LEU 63 -77.51 33.05 3 A SER 94 -164.78 117.94 3 A ILE 102 -137.91 -41.40 3 A LEU 113 -65.05 24.32 4 A HIS 32 60.93 -85.64 4 A LEU 43 -78.46 36.09 4 A LYS 44 -125.87 -65.64 4 A ASP 60 -144.60 43.65 4 A HIS 65 -152.91 55.99 4 A THR 88 -62.53 -174.38 4 A VAL 90 -161.63 114.71 4 A SER 93 -80.44 39.57 4 A ASP 98 -164.81 76.71 4 A ALA 100 -160.43 -60.24 4 A ALA 104 -74.21 -154.57 4 A ARG 108 -152.92 -7.19 4 A THR 112 -118.88 -164.95 4 A LEU 113 -71.36 -165.35 4 A THR 116 -66.39 42.00 5 A LEU 43 -70.87 38.48 5 A GLU 45 -110.64 61.43 5 A ASP 60 -107.56 41.39 5 A THR 79 -96.32 -71.22 5 A LYS 85 61.86 -172.61 5 A SER 93 173.99 130.94 5 A SER 94 173.72 104.97 5 A ASP 98 -158.57 35.98 5 A ALA 100 -161.78 105.47 5 A ARG 108 -156.71 80.50 5 A THR 112 -166.66 9.16 5 A THR 116 -145.80 35.56 6 A GLN 67 -98.45 -85.64 6 A GLU 84 -96.71 -65.37 6 A LYS 89 -159.76 88.83 6 A VAL 90 -145.60 49.29 6 A SER 94 176.16 125.10 6 A ASP 98 -176.40 85.14 6 A ALA 100 -151.77 67.65 6 A ILE 102 -147.01 -16.34 6 A ALA 104 -81.24 -157.32 6 A ASP 114 -153.41 -4.63 6 A THR 116 -63.50 90.64 7 A GLU 3 174.95 -51.56 7 A ALA 31 -92.96 31.71 7 A HIS 32 67.48 -38.12 7 A ASP 60 -95.26 56.81 7 A ARG 81 -56.38 -6.65 7 A LYS 85 60.04 -47.39 7 A VAL 90 -140.39 52.58 7 A ALA 91 -68.16 5.76 7 A SER 94 179.53 -1.31 7 A ASP 98 -152.72 84.63 7 A GLU 99 -149.61 23.80 7 A ALA 100 -148.06 13.93 7 A ILE 102 -79.23 -73.22 7 A LYS 103 63.90 -32.35 7 A ALA 104 -145.13 -155.41 7 A LEU 105 62.16 101.39 8 A LEU 21 -141.13 -34.28 8 A HIS 32 56.54 -85.39 8 A ASP 34 -128.46 -58.32 8 A PHE 46 -65.74 -177.17 8 A LEU 63 -97.37 53.83 8 A HIS 65 -147.67 39.65 8 A GLU 84 -50.56 -75.86 8 A GLN 86 -107.89 71.85 8 A SER 93 -159.40 65.39 8 A SER 94 -117.60 74.50 8 A ASP 98 -143.34 18.26 8 A ALA 100 -147.00 -6.87 8 A ILE 102 -150.60 -39.17 8 A ALA 104 -73.90 29.62 8 A ARG 108 -159.81 56.46 8 A THR 116 -144.89 21.37 9 A GLU 3 -78.79 -85.27 9 A ASN 4 49.25 -41.22 9 A HIS 32 61.87 -42.74 9 A GLN 67 -101.90 -76.91 9 A GLN 86 -56.17 109.88 9 A ASP 92 -156.35 -5.26 9 A SER 94 -163.00 102.72 9 A LYS 103 63.01 -59.69 9 A ARG 108 -165.83 9.92 10 A HIS 32 69.01 -74.20 10 A PHE 46 -112.61 -168.11 10 A LEU 63 -115.67 63.25 10 A THR 79 -128.75 -52.71 10 A GLU 84 -67.68 7.11 10 A ALA 91 -75.33 36.23 10 A SER 94 -156.45 69.79 10 A ALA 100 45.66 71.72 11 A SER 33 -142.49 29.38 11 A ALA 91 -145.59 48.22 11 A SER 93 -69.72 91.93 11 A SER 94 -166.30 105.30 11 A ALA 104 -79.33 48.93 11 A ASP 114 -59.81 3.90 11 A THR 116 -58.80 87.50 11 A THR 117 -96.71 38.24 12 A SER 2 174.87 171.10 12 A LEU 21 -133.80 -36.54 12 A HIS 32 47.41 -86.22 12 A LEU 43 -69.64 23.46 12 A LYS 85 72.80 -14.51 12 A VAL 90 -103.26 73.51 12 A ALA 91 -156.84 85.66 12 A SER 93 -176.22 149.61 12 A SER 94 174.58 112.03 12 A ASP 98 -176.80 118.62 12 A GLU 99 -141.01 35.98 12 A LYS 101 -65.63 81.23 12 A ILE 102 -148.79 -32.37 12 A ALA 104 -70.02 35.61 12 A ARG 108 -157.13 22.51 12 A THR 112 -152.00 86.88 13 A ALA 31 -99.28 32.14 13 A HIS 32 60.76 -81.55 13 A SER 33 -77.37 32.97 13 A LEU 43 -73.02 39.75 13 A LYS 44 -130.25 -31.55 13 A ASP 60 -102.24 41.74 13 A ARG 81 -59.45 18.28 13 A GLN 82 -126.12 -50.45 13 A GLU 84 -72.10 -84.11 13 A ALA 91 -154.48 66.23 13 A SER 94 -162.00 113.68 13 A ILE 102 -127.79 -73.59 13 A LYS 103 60.01 -44.14 13 A LEU 105 -162.64 105.29 13 A LEU 106 -160.93 76.64 13 A ARG 108 -164.36 -166.90 14 A HIS 32 75.06 -57.07 14 A GLU 37 68.28 -82.70 14 A ASP 60 -93.84 49.13 14 A GLN 67 -76.25 -81.26 14 A SER 93 -168.79 102.99 14 A SER 94 -157.06 79.73 14 A GLU 99 48.35 105.33 14 A ALA 104 -69.88 92.62 14 A THR 112 -162.87 105.33 14 A THR 116 -62.89 86.31 15 A HIS 32 61.67 -85.12 15 A ASP 34 -148.39 16.56 15 A ASN 47 -74.81 -166.02 15 A ASP 60 -102.34 40.26 15 A HIS 65 -149.37 24.91 15 A LYS 78 -77.43 21.53 15 A THR 79 -132.33 -61.07 15 A LYS 85 -156.09 84.64 15 A GLN 86 -56.88 85.82 15 A LYS 103 44.48 -77.21 15 A ARG 108 -165.05 53.19 15 A VAL 115 -67.64 40.94 16 A HIS 32 59.72 -79.36 16 A SER 33 -74.74 34.48 16 A SER 64 -92.53 -60.96 16 A ASN 68 -101.17 78.41 16 A SER 94 -162.62 105.86 16 A GLU 99 -147.29 -18.10 16 A ILE 102 -123.19 -85.85 16 A LYS 103 63.87 -28.49 16 A THR 112 174.79 162.42 16 A ASP 114 -72.87 22.52 16 A THR 116 -63.23 88.70 17 A HIS 32 75.09 -67.82 17 A SER 33 -75.26 37.49 17 A LEU 43 -90.38 40.40 17 A LYS 44 -129.54 -52.19 17 A VAL 54 -121.78 -55.56 17 A HIS 65 46.94 24.96 17 A SER 94 -155.87 77.85 17 A ALA 100 -152.02 71.09 17 A LYS 101 -59.58 179.60 17 A LYS 103 62.64 -57.03 17 A ARG 108 173.96 38.17 17 A THR 112 -155.46 19.27 17 A THR 116 -142.53 19.68 18 A ALA 27 -69.75 8.29 18 A SER 33 -72.75 23.21 18 A ASN 47 -78.87 -164.74 18 A ASP 60 -115.23 61.96 18 A GLU 84 -92.53 -81.14 18 A SER 93 175.61 144.62 18 A SER 94 174.55 126.29 18 A ALA 100 -135.70 -60.51 18 A ILE 102 -136.03 -53.34 18 A LEU 105 -164.45 100.30 18 A ARG 108 -178.69 50.42 19 A ALA 31 -97.67 45.39 19 A HIS 32 62.67 -35.02 19 A ASP 34 -69.27 1.10 19 A LEU 43 -77.43 21.69 19 A GLN 56 -65.76 -70.21 19 A ASP 60 -112.53 52.63 19 A GLN 86 -50.69 101.15 19 A LYS 89 -64.64 26.28 19 A SER 94 -160.81 75.23 19 A LYS 103 64.50 -56.19 19 A ALA 104 -95.54 -154.45 19 A LEU 105 58.97 77.87 19 A ARG 108 -143.24 -7.03 Heterogeneous nuclear ribonucleoprotein Q lowest energy, model1 NMR structure of the Acidic domain of SYNCRIP (24-140) 1 N N A ASN 4 A ASN 4 HELX_P A GLY 12 A GLY 12 1 1 9 A PRO 14 A PRO 14 HELX_P A GLU 19 A GLU 19 1 2 6 A GLU 23 A GLU 23 HELX_P A GLY 28 A GLY 28 1 3 6 A ASP 36 A ASP 36 HELX_P A ALA 42 A ALA 42 1 4 7 A ASN 47 A ASN 47 HELX_P A LYS 59 A LYS 59 1 5 13 A ASN 68 A ASN 68 HELX_P A MET 77 A MET 77 1 6 10 A LYS 78 A LYS 78 HELX_P A GLU 84 A GLU 84 5 7 7 Structural Genomics, Unknown Function Acidic domain, SYNCRIP, Structural Genomics, Unknown Function, PSI-Biology, Joint Center for Structural Genomics, JCSG, Partnership for T-Cell Biology, TCELL HNRPQ_HUMAN UNP 1 24 O60506 SENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDERAIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYR QREKQGTKVADSSKGPDEAKIKALLERTGYTLDVTTG 24 140 2NBB 2 118 O60506 A 1 2 118 1 EXPRESSION TAG GLY 1 2NBB A O60506 UNP 1 1 P 1