0.011712
0.006762
0.000000
0.000000
0.013524
0.000000
0.000000
0.000000
0.021315
0.00000
0.00000
0.00000
Czabotar, P.E.
Colman, P.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
85.381
85.381
46.916
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
104
6217
6222
10.1073/pnas.0701297104
17389404
Structural insights into the degradation of Mcl-1 induced by BH3 domains.
2007
10.2210/pdb2nla/pdb
pdb_00002nla
100
1
monochrometer
CCD
2005-11-08
ADSC QUANTUM 315
Rosenbaum-Rock double crystal sagittal focusing monochrometer
SINGLE WAVELENGTH
M
x-ray
1
0.9715
1.0
X29A
NSLS
0.9715
SYNCHROTRON
NSLS BEAMLINE X29A
17816.135
FUSION PROTEIN CONSISTING OF Induced myeloid leukemia cell differentiation protein Mcl-1 homolog
residues 171-208 and residues 209-327
1
man
polymer
3013.519
Phorbol-12-myristate-13-acetate-induced protein 1
BH3 (UNP residues 68-93)
1
nat
polymer
18.015
water
31
nat
water
Protein Noxa
no
no
EDDLYRQSLEIISRYLREQATGSKDSKPLGEAGAAGRRALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVM
IHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG
EDDLYRQSLEIISRYLREQATGSKDSKPLGEAGAAGRRALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVM
IHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIEPLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG
A
polypeptide(L)
no
no
PADLKDECAQLRRIGDKVNLRQKLLN
PADLKDECAQLRRIGDKVNLRQKLLN
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
mouse
Rattus, Homo
,
,
Escherichia
Escherichia coli
sample
Mcl1
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
Plasmid
pGEX-6P3
human
sample
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
Plasmid
pGEX-6P3
mouse
sample
10090
Mus musculus
1
2.37
48.09
VAPOR DIFFUSION, HANGING DROP
8.0
12% PEG 4K, 4% isopropanol, 5% dioxane, 0.1M tris-HCl, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
entity
entity_src_gen
entity_src_nat
pdbx_entity_src_syn
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_unobs_or_zero_occ_atoms
repository
Initial release
Version format compliance
Version format compliance
Source and taxonomy
Structure summary
Refinement description
Advisory
Data collection
Database references
1
0
2007-03-27
1
1
2008-05-01
1
2
2011-07-13
1
3
2017-06-14
1
4
2017-10-18
1
5
2023-12-27
_entity.src_method
_software.classification
_software.contact_author
_software.contact_author_email
_software.date
_software.language
_software.location
_software.name
_software.type
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
Solution structure of Mcl-1
RCSB
Y
PDBJ
2006-10-19
REL
REL
HOH
water
HOH
3
3
HOH
HOH
3
A
HOH
4
3
HOH
HOH
4
A
HOH
7
3
HOH
HOH
7
A
HOH
8
3
HOH
HOH
8
A
HOH
9
3
HOH
HOH
9
A
HOH
10
3
HOH
HOH
10
A
HOH
11
3
HOH
HOH
11
A
HOH
13
3
HOH
HOH
13
A
HOH
14
3
HOH
HOH
14
A
HOH
15
3
HOH
HOH
15
A
HOH
16
3
HOH
HOH
16
A
HOH
17
3
HOH
HOH
17
A
HOH
18
3
HOH
HOH
18
A
HOH
19
3
HOH
HOH
19
A
HOH
20
3
HOH
HOH
20
A
HOH
21
3
HOH
HOH
21
A
HOH
22
3
HOH
HOH
22
A
HOH
23
3
HOH
HOH
23
A
HOH
24
3
HOH
HOH
24
A
HOH
25
3
HOH
HOH
25
A
HOH
26
3
HOH
HOH
26
A
HOH
28
3
HOH
HOH
28
A
HOH
29
3
HOH
HOH
29
A
HOH
30
3
HOH
HOH
30
A
HOH
31
3
HOH
HOH
31
A
HOH
1
3
HOH
HOH
1
B
HOH
2
3
HOH
HOH
2
B
HOH
5
3
HOH
HOH
5
B
HOH
6
3
HOH
HOH
6
B
HOH
12
3
HOH
HOH
12
B
HOH
27
3
HOH
HOH
27
B
n
1
171
A
ASP
172
n
2
ASP
172
A
ASP
173
n
3
ASP
173
A
LEU
174
n
4
LEU
174
A
TYR
175
n
5
TYR
175
A
ARG
176
n
6
ARG
176
A
GLN
177
n
7
GLN
177
A
SER
178
n
8
SER
178
A
LEU
179
n
9
LEU
179
A
GLU
180
n
10
GLU
180
A
ILE
181
n
11
ILE
181
A
ILE
182
n
12
ILE
182
A
SER
183
n
13
SER
183
A
ARG
184
n
14
ARG
184
A
TYR
185
n
15
TYR
185
A
LEU
186
n
16
LEU
186
A
ARG
187
n
17
ARG
187
A
GLU
188
n
18
GLU
188
A
GLN
189
n
19
GLN
189
A
ALA
190
n
20
ALA
190
A
THR
191
n
21
THR
191
A
GLY
192
n
22
GLY
192
A
SER
193
n
23
SER
193
A
LYS
194
n
24
LYS
194
A
ASP
195
n
25
ASP
195
A
SER
196
n
26
SER
196
A
LYS
197
n
27
LYS
197
A
PRO
198
n
28
PRO
198
A
LEU
199
n
29
LEU
199
A
GLY
200
n
30
GLY
200
A
GLU
201
n
31
GLU
201
A
ALA
202
n
32
ALA
202
A
GLY
203
n
33
GLY
203
A
ALA
204
n
34
ALA
204
A
ALA
205
n
35
ALA
205
A
GLY
206
n
36
GLY
206
A
ARG
207
n
37
ARG
207
A
ARG
208
n
38
ARG
208
A
ALA
209
n
39
ALA
209
A
LEU
210
n
40
LEU
210
A
GLU
211
n
41
GLU
211
A
THR
212
n
42
THR
212
A
LEU
213
n
43
LEU
213
A
ARG
214
n
44
ARG
214
A
ARG
215
n
45
ARG
215
A
VAL
216
n
46
VAL
216
A
GLY
217
n
47
GLY
217
A
ASP
218
n
48
ASP
218
A
GLY
219
n
49
GLY
219
A
VAL
220
n
50
VAL
220
A
GLN
221
n
51
GLN
221
A
ARG
222
n
52
ARG
222
A
ASN
223
n
53
ASN
223
A
HIS
224
n
54
HIS
224
A
GLU
225
n
55
GLU
225
A
THR
226
n
56
THR
226
A
ALA
227
n
57
ALA
227
A
PHE
228
n
58
PHE
228
A
GLN
229
n
59
GLN
229
A
GLY
230
n
60
GLY
230
A
MET
231
n
61
MET
231
A
LEU
232
n
62
LEU
232
A
ARG
233
n
63
ARG
233
A
LYS
234
n
64
LYS
234
A
LEU
235
n
65
LEU
235
A
ASP
236
n
66
ASP
236
A
ILE
237
n
67
ILE
237
A
LYS
238
n
68
LYS
238
A
ASN
239
n
69
ASN
239
A
GLU
240
n
70
GLU
240
A
ASP
241
n
71
ASP
241
A
ASP
242
n
72
ASP
242
A
VAL
243
n
73
VAL
243
A
LYS
244
n
74
LYS
244
A
SER
245
n
75
SER
245
A
LEU
246
n
76
LEU
246
A
SER
247
n
77
SER
247
A
ARG
248
n
78
ARG
248
A
VAL
249
n
79
VAL
249
A
MET
250
n
80
MET
250
A
ILE
251
n
81
ILE
251
A
HIS
252
n
82
HIS
252
A
VAL
253
n
83
VAL
253
A
PHE
254
n
84
PHE
254
A
SER
255
n
85
SER
255
A
ASP
256
n
86
ASP
256
A
GLY
257
n
87
GLY
257
A
VAL
258
n
88
VAL
258
A
THR
259
n
89
THR
259
A
ASN
260
n
90
ASN
260
A
TRP
261
n
91
TRP
261
A
GLY
262
n
92
GLY
262
A
ARG
263
n
93
ARG
263
A
ILE
264
n
94
ILE
264
A
VAL
265
n
95
VAL
265
A
THR
266
n
96
THR
266
A
LEU
267
n
97
LEU
267
A
ILE
268
n
98
ILE
268
A
SER
269
n
99
SER
269
A
PHE
270
n
100
PHE
270
A
GLY
271
n
101
GLY
271
A
ALA
272
n
102
ALA
272
A
PHE
273
n
103
PHE
273
A
VAL
274
n
104
VAL
274
A
ALA
275
n
105
ALA
275
A
LYS
276
n
106
LYS
276
A
HIS
277
n
107
HIS
277
A
LEU
278
n
108
LEU
278
A
LYS
279
n
109
LYS
279
A
THR
280
n
110
THR
280
A
ILE
281
n
111
ILE
281
A
ASN
282
n
112
ASN
282
A
GLN
283
n
113
GLN
283
A
GLU
284
n
114
GLU
284
A
SER
285
n
115
SER
285
A
CYS
286
n
116
CYS
286
A
ILE
287
n
117
ILE
287
A
GLU
288
n
118
GLU
288
A
PRO
289
n
119
PRO
289
A
LEU
290
n
120
LEU
290
A
ALA
291
n
121
ALA
291
A
GLU
292
n
122
GLU
292
A
SER
293
n
123
SER
293
A
ILE
294
n
124
ILE
294
A
THR
295
n
125
THR
295
A
ASP
296
n
126
ASP
296
A
VAL
297
n
127
VAL
297
A
LEU
298
n
128
LEU
298
A
VAL
299
n
129
VAL
299
A
ARG
300
n
130
ARG
300
A
THR
301
n
131
THR
301
A
LYS
302
n
132
LYS
302
A
ARG
303
n
133
ARG
303
A
ASP
304
n
134
ASP
304
A
TRP
305
n
135
TRP
305
A
LEU
306
n
136
LEU
306
A
VAL
307
n
137
VAL
307
A
LYS
308
n
138
LYS
308
A
GLN
309
n
139
GLN
309
A
ARG
310
n
140
ARG
310
A
GLY
311
n
141
GLY
311
A
TRP
312
n
142
TRP
312
A
ASP
313
n
143
ASP
313
A
GLY
314
n
144
GLY
314
A
PHE
315
n
145
PHE
315
A
VAL
316
n
146
VAL
316
A
GLU
317
n
147
GLU
317
A
PHE
318
n
148
PHE
318
A
PHE
319
n
149
PHE
319
A
HIS
320
n
150
HIS
320
A
VAL
321
n
151
VAL
321
A
n
152
322
A
n
153
323
A
n
154
324
A
n
155
325
A
n
156
326
A
n
157
327
A
n
1
68
B
n
2
69
B
n
3
70
B
n
4
71
B
n
5
72
B
ASP
73
n
6
ASP
73
B
GLU
74
n
7
GLU
74
B
CYS
75
n
8
CYS
75
B
ALA
76
n
9
ALA
76
B
GLN
77
n
10
GLN
77
B
LEU
78
n
11
LEU
78
B
ARG
79
n
12
ARG
79
B
ARG
80
n
13
ARG
80
B
ILE
81
n
14
ILE
81
B
GLY
82
n
15
GLY
82
B
ASP
83
n
16
ASP
83
B
LYS
84
n
17
LYS
84
B
VAL
85
n
18
VAL
85
B
ASN
86
n
19
ASN
86
B
LEU
87
n
20
LEU
87
B
ARG
88
n
21
ARG
88
B
GLN
89
n
22
GLN
89
B
LYS
90
n
23
LYS
90
B
LEU
91
n
24
LEU
91
B
LEU
92
n
25
LEU
92
B
ASN
93
n
26
ASN
93
B
7.3458
-0.5017
-0.6155
5.7216
0.0850
10.5334
-0.0137
-0.4616
0.7760
-0.1552
0.1268
-0.0328
-0.9296
-0.6959
-0.1132
-0.3586
0.0610
0.0310
-0.3017
-0.0586
-0.3230
refined
-26.6062
3.2318
-7.1963
X-RAY DIFFRACTION
20.4622
-9.6652
3.5592
20.4276
0.3025
7.7655
0.5758
1.2816
-0.6782
-1.8879
-0.0637
1.5006
-0.1188
0.0764
-0.5121
-0.1677
-0.0108
0.0187
-0.1562
-0.1316
-0.4211
refined
-18.7253
20.7181
4.2364
X-RAY DIFFRACTION
A
175
A
5
A
321
A
151
X-RAY DIFFRACTION
1
ALL
B
73
B
6
B
93
B
26
X-RAY DIFFRACTION
2
ALL
author_and_software_defined_assembly
PISA
2
dimeric
1620
-10
9110
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
OE1
GLU
180
A
OE1
GLU
10
0
Y
1
A
OE2
GLU
180
A
OE2
GLU
10
0
Y
1
A
CZ
ARG
184
A
CZ
ARG
14
0
Y
1
A
NH1
ARG
184
A
NH1
ARG
14
0
Y
1
A
NH2
ARG
184
A
NH2
ARG
14
0
Y
1
A
CZ
ARG
187
A
CZ
ARG
17
0
Y
1
A
NH1
ARG
187
A
NH1
ARG
17
0
Y
1
A
NH2
ARG
187
A
NH2
ARG
17
0
Y
1
A
CZ
ARG
208
A
CZ
ARG
38
0
Y
1
A
NH1
ARG
208
A
NH1
ARG
38
0
Y
1
A
NH2
ARG
208
A
NH2
ARG
38
0
Y
1
A
OE1
GLU
225
A
OE1
GLU
55
0
Y
1
A
OE2
GLU
225
A
OE2
GLU
55
0
Y
1
A
OE1
GLN
229
A
OE1
GLN
59
0
Y
1
A
NE2
GLN
229
A
NE2
GLN
59
0
Y
1
A
CG
HIS
252
A
CG
HIS
82
0
Y
1
A
ND1
HIS
252
A
ND1
HIS
82
0
Y
1
A
CD2
HIS
252
A
CD2
HIS
82
0
Y
1
A
CE1
HIS
252
A
CE1
HIS
82
0
Y
1
A
NE2
HIS
252
A
NE2
HIS
82
0
Y
1
A
OE1
GLU
284
A
OE1
GLU
114
0
Y
1
A
OE2
GLU
284
A
OE2
GLU
114
0
Y
1
A
CG
GLU
288
A
CG
GLU
118
0
Y
1
A
CD
GLU
288
A
CD
GLU
118
0
Y
1
A
OE1
GLU
288
A
OE1
GLU
118
0
Y
1
A
OE2
GLU
288
A
OE2
GLU
118
0
Y
1
B
OD1
ASP
73
B
OD1
ASP
6
0
Y
1
B
OD2
ASP
73
B
OD2
ASP
6
0
Y
1
B
CD
GLU
74
B
CD
GLU
7
0
Y
1
B
OE1
GLU
74
B
OE1
GLU
7
0
Y
1
B
OE2
GLU
74
B
OE2
GLU
7
0
Y
1
B
CG
LEU
87
B
CG
LEU
20
0
Y
1
B
CD1
LEU
87
B
CD1
LEU
20
0
Y
1
B
CD2
LEU
87
B
CD2
LEU
20
0
Y
1
B
CG
ARG
88
B
CG
ARG
21
0
Y
1
B
CD
ARG
88
B
CD
ARG
21
0
Y
1
B
NE
ARG
88
B
NE
ARG
21
0
Y
1
B
CZ
ARG
88
B
CZ
ARG
21
0
Y
1
B
NH1
ARG
88
B
NH1
ARG
21
0
Y
1
B
NH2
ARG
88
B
NH2
ARG
21
0
Y
1
A
GLU
171
A
GLU
1
1
Y
1
A
GLU
322
A
GLU
152
1
Y
1
A
ASP
323
A
ASP
153
1
Y
1
A
LEU
324
A
LEU
154
1
Y
1
A
GLU
325
A
GLU
155
1
Y
1
A
GLY
326
A
GLY
156
1
Y
1
A
GLY
327
A
GLY
157
1
Y
1
B
PRO
68
B
PRO
1
1
Y
1
B
ALA
69
B
ALA
2
1
Y
1
B
ASP
70
B
ASP
3
1
Y
1
B
LEU
71
B
LEU
4
1
Y
1
B
LYS
72
B
LYS
5
1
Y
1
A
A
O
O
HOH
HOH
9
29
2.06
1
A
ASP
173
-58.56
-85.63
1
A
ALA
202
-147.84
-25.49
1
A
ASP
236
-48.98
104.04
1
A
LYS
238
-131.84
-89.73
1
A
ASN
239
-67.15
-169.57
1
A
VAL
297
-46.93
-71.53
1
B
ALA
76
-67.40
57.82
80.220
1.360
0.680
0.000
1.360
0.000
-2.040
0.955
0.873
CHAIN D REFERS TO THE NOXA PEPTIDE WHICH IS COVALENTLY LINKED TO MCL-1 THROUGH CYS 286 OF MCL-1 AND CYS 75 OF NOXA. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.291
0.207
0.211
2.800
73.920
230
4699
4.700
99.860
55.937
0.472
RANDOM
1
THROUGHOUT
0.00
MOLECULAR REPLACEMENT
0.452
0.800
0.800
1.200
MAXIMUM LIKELIHOOD
MASK
2.800
73.920
31
1406
0
0
1375
0.012
0.022
1395
1.341
1.951
1874
5.571
5.000
169
34.213
22.958
71
19.407
15.000
264
16.516
15.000
17
0.088
0.200
208
0.004
0.020
1044
0.242
0.200
717
0.303
0.200
947
0.204
0.200
68
0.208
0.200
47
0.226
0.200
9
0.425
1.500
875
0.705
2.000
1353
0.949
3.000
590
1.561
4.500
521
0.428
0.413
2.871
18
344
362
20
98.910
2.800
100.000
2NLA
4938
0.068
1.383
1
13.200
9.000
99.900
0.646
2.80
2.90
476
0.941
7.90
100.00
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
5.2.0005
data extraction
PDB
sw-help@rcsb.rutgers.edu
April. 3, 2006
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
2.000
data collection
HKL-2000
data reduction
HKL-2000
phasing
PHASER
V. 1.3.1
Crystal structure of the Mcl-1:mNoxaB BH3 complex
1
N
N
2
N
N
3
N
N
3
N
N
A
ASP
172
A
ASP
2
HELX_P
A
LEU
174
A
LEU
4
5
1
3
A
TYR
175
A
TYR
5
HELX_P
A
THR
191
A
THR
21
1
2
17
A
ALA
202
A
ALA
32
HELX_P
A
HIS
224
A
HIS
54
1
3
23
A
HIS
224
A
HIS
54
HELX_P
A
LEU
235
A
LEU
65
1
4
12
A
ASN
239
A
ASN
69
HELX_P
A
PHE
254
A
PHE
84
1
5
16
A
SER
255
A
SER
85
HELX_P
A
GLY
257
A
GLY
87
5
6
3
A
ASN
260
A
ASN
90
HELX_P
A
ILE
281
A
ILE
111
1
7
22
A
GLN
283
A
GLN
113
HELX_P
A
SER
285
A
SER
115
5
8
3
A
CYS
286
A
CYS
116
HELX_P
A
LYS
302
A
LYS
132
1
9
17
A
LYS
302
A
LYS
132
HELX_P
A
GLN
309
A
GLN
139
1
10
8
A
GLY
311
A
GLY
141
HELX_P
A
PHE
319
A
PHE
149
1
11
9
B
ALA
76
B
ALA
9
HELX_P
B
LEU
91
B
LEU
24
1
12
16
disulf
2.026
A
CYS
286
A
SG
CYS
116
1_555
B
CYS
75
B
SG
CYS
8
5_555
APOPTOSIS
Apoptosis, Bcl-2, Mcl-1, Noxa
MCL1_MOUSE
UNP
1
151
P97287
EDDELYRQSLEIISRYLREQATGSKDAKPLGEAGAAGRR
MCL1_HUMAN
UNP
1
209
Q07820
ALETLRRVGDGVQRNHETAFQGMLRKLDIKNEDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAKHLKTINQESCIE
PLAESITDVLVRTKRDWLVKQRGWDGFVEFFHVEDLEGG
APR_MOUSE
UNP
2
68
Q9JM54
PADLKDECAQLRRIGDKVNLRQKLLN
152
189
2NLA
171
208
P97287
A
1
1
38
209
327
2NLA
209
327
Q07820
A
2
39
157
68
93
2NLA
68
93
Q9JM54
B
3
1
26
173
P 63