0.013439 0.000000 0.000000 0.000000 0.010461 0.000000 0.000000 0.000000 0.010217 0.00000 0.00000 0.00000 Waters, T.R. Eryilmaz, J. Geddes, S. Barrett, T.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 74.410 95.597 97.878 C10 H15 N5 O10 P2 427.201 n ADENOSINE-5'-DIPHOSPHATE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C20 H12 O5 332.306 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID FLUORESCEIN non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C3 H7 N O 73.094 N-METHYLACETAMIDE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 S P N 6 N O N 7 N O N 8 N O N 9 N O N 10 N C N 11 R C N 12 N O N 13 S C N 14 N O N 15 R C N 16 N O N 17 R C Y 18 N N Y 19 N C Y 20 N N Y 21 N C Y 22 N C N 23 N N Y 24 N N Y 25 N C Y 26 N N Y 27 N C N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N N N 44 S C N 45 N C N 46 N O N 47 N C N 48 N O N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N N N 57 S C N 58 N C N 59 N O N 60 N C N 61 N C N 62 N C N 63 N N N 64 N C N 65 N N N 66 N N N 67 N O N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N N N 84 S C N 85 N C N 86 N O N 87 N C N 88 N C N 89 N O N 90 N N N 91 N O N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N N N 101 S C N 102 N C N 103 N O N 104 N C N 105 N C N 106 N O N 107 N O N 108 N O N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N N N 117 R C N 118 N C N 119 N O N 120 N C N 121 N S N 122 N O N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N O N 131 N P N 132 N O N 133 N O N 134 N O N 135 N C N 136 R C N 137 N O N 138 S C N 139 N O N 140 N C N 141 R C N 142 N N N 143 N C N 144 N O N 145 N N N 146 N C N 147 N O N 148 N C N 149 N C N 150 N C N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H Y 166 N C N 167 N O Y 168 N C Y 169 N C Y 170 N O Y 171 N C Y 172 N C Y 173 N C N 174 N O Y 175 N C Y 176 N C Y 177 N C Y 178 N C Y 179 N C Y 180 N C Y 181 N C Y 182 N C Y 183 N C Y 184 N C Y 185 N C Y 186 N C Y 187 N C N 188 N C N 189 N O N 190 N O N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N N N 204 S C N 205 N C N 206 N O N 207 N C N 208 N C N 209 N C N 210 N O N 211 N N N 212 N O N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N N N 224 S C N 225 N C N 226 N O N 227 N C N 228 N C N 229 N C N 230 N O N 231 N O N 232 N O N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N N N 243 N C N 244 N C N 245 N O N 246 N O N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C Y 257 N C Y 258 N N Y 259 N C Y 260 N C Y 261 N N N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 S C N 278 N C N 279 N C N 280 N C N 281 N O N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N N N 296 S C N 297 N C N 298 N O N 299 N C N 300 N C N 301 N C N 302 N C N 303 N O N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N N N 318 S C N 319 N C N 320 N O N 321 N C N 322 N C N 323 N C N 324 N C N 325 N N N 326 N O N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N N N 343 S C N 344 N C N 345 N O N 346 N C N 347 N C N 348 N S N 349 N C N 350 N O N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N C N 363 N C N 364 N O N 365 N N N 366 N C N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C N 385 N O N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N N N 398 S C N 399 N C N 400 N O N 401 N C N 402 N C N 403 N C N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N N N 415 S C N 416 N C N 417 N O N 418 N C N 419 N O N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N N N 429 S C N 430 N C N 431 N O N 432 R C N 433 N O N 434 N C N 435 N O N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N N N 446 S C N 447 N C N 448 N O N 449 N C Y 450 N C Y 451 N C Y 452 N C Y 453 N C Y 454 N C Y 455 N C N 456 N O N 457 N O N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N N N 470 S C N 471 N C N 472 N O N 473 N C N 474 N C N 475 N C N 476 N O N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing Y 30 N sing Y 31 N sing Y 32 N doub N 33 N sing Y 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N doub N 39 N sing N 40 N sing Y 41 N sing Y 42 N doub N 43 N sing Y 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N doub N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N doub N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing Y 165 N doub Y 166 N sing N 167 N sing Y 168 N sing N 169 N sing Y 170 N sing Y 171 N doub Y 172 N sing Y 173 N doub Y 174 N sing Y 175 N sing N 176 N sing N 177 N doub Y 178 N sing Y 179 N doub N 180 N sing Y 181 N sing N 182 N sing Y 183 N doub Y 184 N sing Y 185 N sing Y 186 N sing Y 187 N doub N 188 N sing N 189 N sing Y 190 N doub Y 191 N sing Y 192 N sing N 193 N sing Y 194 N doub N 195 N sing Y 196 N sing N 197 N sing Y 198 N doub N 199 N sing N 200 N sing N 201 N doub N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N doub N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing Y 261 N sing Y 262 N doub Y 263 N doub N 264 N sing Y 265 N sing N 266 N sing Y 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N doub N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N doub N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing Y 378 N doub Y 379 N sing Y 380 N sing N 381 N sing Y 382 N doub N 383 N sing Y 384 N doub N 385 N sing Y 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N doub N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N doub N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N doub N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N doub N 443 N sing N 444 N sing N 445 N sing N 446 N sing Y 447 N doub Y 448 N sing Y 449 N sing N 450 N sing Y 451 N doub N 452 N sing Y 453 N doub N 454 N sing Y 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing NE Febs Lett. FEBLAL 0165 0014-5793 580 6423 6427 10.1016/j.febslet.2006.10.051 17097086 Damage detection by the UvrABC pathway: crystal structure of UvrB bound to fluorescein-adducted DNA 2006 10.2210/pdb2nmv/pdb pdb_00002nmv 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 Bent cylindrical mirror CCD 2005-12-15 ADSC QUANTUM 4 Si 111 channel SINGLE WAVELENGTH M x-ray 1 0.980 1.0 ID23-2 ESRF 0.980 SYNCHROTRON ESRF BEAMLINE ID23-2 1476.007 5'-D(P*TP*TP*TP*TP*T)-3' 1 syn polymer 76440.133 UvrABC system protein B 3.1.-.- 1 man polymer 4506.226 UvrABC system protein B 3.1.-.- residues 622-659 1 man polymer 73.094 N-METHYLACETAMIDE 1 syn non-polymer 332.306 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID 1 syn non-polymer 427.201 ADENOSINE-5'-DIPHOSPHATE 1 syn non-polymer Protein uvrB, Excinuclease ABC subunit B, Protein dinA Protein uvrB, Excinuclease ABC subunit B, Protein dinA no no (DT)(DT)(DT)(DT)(DT) TTTTT D polydeoxyribonucleotide no no MKDRFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEF FPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPEEYREMVVS LRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCVRVEFFGDEIERIREVDALTGEILGDRDH VAIFPASHFVTRAEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGS TPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYE IEHTDEMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITKSM EIAINETKRRREQQERFNEEHGITPKTINKEIRDVIRATVAAEDKAEYKTKAAPKLSKMTKKERQKVVEQMEHEMKEAAK ALDFERAAELRDLLLELKAEG MKDRFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEF FPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPEEYREMVVS LRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCVRVEFFGDEIERIREVDALTGEILGDRDH VAIFPASHFVTRAEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGS TPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYE IEHTDEMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITKSM EIAINETKRRREQQERFNEEHGITPKTINKEIRDVIRATVAAEDKAEYKTKAAPKLSKMTKKERQKVVEQMEHEMKEAAK ALDFERAAELRDLLLELKAEG A polypeptide(L) no no KERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKA KERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKA B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacillus Escherichia sample uvrB 1423 Bacillus subtilis 562 Escherichia coli BL21DE3 pLysS Plasmid pET8c Bacillus Escherichia sample uvrB 1423 Bacillus subtilis 562 Escherichia coli BL21DE3 pLysS Plasmid pET8c 1 2.11 41.74 8.5 18-20% PEG 20000, 0.1M pH 8.5 Tris-Hcl, microbatch, temperature 289K 289 PEG 20000 1 Tris-Hcl 1 PEG 20000 2 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Refinement description 1 0 2007-01-16 1 1 2008-05-01 1 2 2011-07-13 1 3 2023-10-25 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id The same protein complexed with fluorescein adducted pentathymine RCSB Y PDBJ 2006-10-23 REL NML N-METHYLACETAMIDE FLU 2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID ADP ADENOSINE-5'-DIPHOSPHATE 2D7D PDB ENTRY 2D7D PDB experimental model TFL 3 4 NML NML 103 D FLU 600 5 FLU FLU 600 D ADP 500 6 ADP ADP 662 A T 1 n 1 DT 1 D T 2 n 2 DT 2 D TFL 3 n 3 DT 3 D T 4 n 4 DT 4 D T 5 n 5 DT 5 D n 1 1 A n 2 2 A ASP 3 n 3 ASP 3 A ARG 4 n 4 ARG 4 A PHE 5 n 5 PHE 5 A GLU 6 n 6 GLU 6 A LEU 7 n 7 LEU 7 A VAL 8 n 8 VAL 8 A n 9 9 A LYS 10 n 10 LYS 10 A TYR 11 n 11 TYR 11 A GLN 12 n 12 GLN 12 A PRO 13 n 13 PRO 13 A GLN 14 n 14 GLN 14 A GLY 15 n 15 GLY 15 A ASP 16 n 16 ASP 16 A GLN 17 n 17 GLN 17 A PRO 18 n 18 PRO 18 A LYS 19 n 19 LYS 19 A ALA 20 n 20 ALA 20 A ILE 21 n 21 ILE 21 A GLU 22 n 22 GLU 22 A LYS 23 n 23 LYS 23 A LEU 24 n 24 LEU 24 A VAL 25 n 25 VAL 25 A LYS 26 n 26 LYS 26 A GLY 27 n 27 GLY 27 A ILE 28 n 28 ILE 28 A GLN 29 n 29 GLN 29 A GLU 30 n 30 GLU 30 A GLY 31 n 31 GLY 31 A LYS 32 n 32 LYS 32 A LYS 33 n 33 LYS 33 A HIS 34 n 34 HIS 34 A GLN 35 n 35 GLN 35 A THR 36 n 36 THR 36 A LEU 37 n 37 LEU 37 A LEU 38 n 38 LEU 38 A GLY 39 n 39 GLY 39 A ALA 40 n 40 ALA 40 A THR 41 n 41 THR 41 A GLY 42 n 42 GLY 42 A THR 43 n 43 THR 43 A GLY 44 n 44 GLY 44 A LYS 45 n 45 LYS 45 A THR 46 n 46 THR 46 A PHE 47 n 47 PHE 47 A THR 48 n 48 THR 48 A VAL 49 n 49 VAL 49 A SER 50 n 50 SER 50 A ASN 51 n 51 ASN 51 A LEU 52 n 52 LEU 52 A ILE 53 n 53 ILE 53 A LYS 54 n 54 LYS 54 A GLU 55 n 55 GLU 55 A VAL 56 n 56 VAL 56 A ASN 57 n 57 ASN 57 A LYS 58 n 58 LYS 58 A PRO 59 n 59 PRO 59 A THR 60 n 60 THR 60 A LEU 61 n 61 LEU 61 A VAL 62 n 62 VAL 62 A ILE 63 n 63 ILE 63 A ALA 64 n 64 ALA 64 A HIS 65 n 65 HIS 65 A ASN 66 n 66 ASN 66 A LYS 67 n 67 LYS 67 A THR 68 n 68 THR 68 A LEU 69 n 69 LEU 69 A ALA 70 n 70 ALA 70 A GLY 71 n 71 GLY 71 A GLN 72 n 72 GLN 72 A LEU 73 n 73 LEU 73 A TYR 74 n 74 TYR 74 A SER 75 n 75 SER 75 A GLU 76 n 76 GLU 76 A PHE 77 n 77 PHE 77 A LYS 78 n 78 LYS 78 A GLU 79 n 79 GLU 79 A PHE 80 n 80 PHE 80 A PHE 81 n 81 PHE 81 A PRO 82 n 82 PRO 82 A ASN 83 n 83 ASN 83 A ASN 84 n 84 ASN 84 A ALA 85 n 85 ALA 85 A VAL 86 n 86 VAL 86 A GLU 87 n 87 GLU 87 A TYR 88 n 88 TYR 88 A PHE 89 n 89 PHE 89 A VAL 90 n 90 VAL 90 A SER 91 n 91 SER 91 A TYR 92 n 92 TYR 92 A TYR 93 n 93 TYR 93 A ASP 94 n 94 ASP 94 A TYR 95 n 95 TYR 95 A TYR 96 n 96 TYR 96 A GLN 97 n 97 GLN 97 A PRO 98 n 98 PRO 98 A GLU 99 n 99 GLU 99 A ALA 100 n 100 ALA 100 A TYR 101 n 101 TYR 101 A VAL 102 n 102 VAL 102 A PRO 103 n 103 PRO 103 A GLN 104 n 104 GLN 104 A THR 105 n 105 THR 105 A ASP 106 n 106 ASP 106 A THR 107 n 107 THR 107 A PHE 108 n 108 PHE 108 A ILE 109 n 109 ILE 109 A GLU 110 n 110 GLU 110 A LYS 111 n 111 LYS 111 A ASP 112 n 112 ASP 112 A ALA 113 n 113 ALA 113 A SER 114 n 114 SER 114 A ILE 115 n 115 ILE 115 A ASN 116 n 116 ASN 116 A ASP 117 n 117 ASP 117 A GLU 118 n 118 GLU 118 A ILE 119 n 119 ILE 119 A ASP 120 n 120 ASP 120 A LYS 121 n 121 LYS 121 A LEU 122 n 122 LEU 122 A ARG 123 n 123 ARG 123 A HIS 124 n 124 HIS 124 A SER 125 n 125 SER 125 A ALA 126 n 126 ALA 126 A THR 127 n 127 THR 127 A SER 128 n 128 SER 128 A ALA 129 n 129 ALA 129 A LEU 130 n 130 LEU 130 A PHE 131 n 131 PHE 131 A GLU 132 n 132 GLU 132 A ARG 133 n 133 ARG 133 A ARG 134 n 134 ARG 134 A ASP 135 n 135 ASP 135 A VAL 136 n 136 VAL 136 A ILE 137 n 137 ILE 137 A ILE 138 n 138 ILE 138 A ILE 139 n 139 ILE 139 A ALA 140 n 140 ALA 140 A SER 141 n 141 SER 141 A VAL 142 n 142 VAL 142 A SER 143 n 143 SER 143 A CYS 144 n 144 CYS 144 A ILE 145 n 145 ILE 145 A TYR 146 n 146 TYR 146 A GLY 147 n 147 GLY 147 A LEU 148 n 148 LEU 148 A GLY 149 n 149 GLY 149 A SER 150 n 150 SER 150 A PRO 151 n 151 PRO 151 A GLU 152 n 152 GLU 152 A GLU 153 n 153 GLU 153 A TYR 154 n 154 TYR 154 A ARG 155 n 155 ARG 155 A GLU 156 n 156 GLU 156 A MET 157 n 157 MET 157 A VAL 158 n 158 VAL 158 A VAL 159 n 159 VAL 159 A SER 160 n 160 SER 160 A LEU 161 n 161 LEU 161 A ARG 162 n 162 ARG 162 A THR 163 n 163 THR 163 A GLU 164 n 164 GLU 164 A MET 165 n 165 MET 165 A GLU 166 n 166 GLU 166 A ILE 167 n 167 ILE 167 A GLU 168 n 168 GLU 168 A ARG 169 n 169 ARG 169 A ASN 170 n 170 ASN 170 A GLU 171 n 171 GLU 171 A LEU 172 n 172 LEU 172 A LEU 173 n 173 LEU 173 A ARG 174 n 174 ARG 174 A LYS 175 n 175 LYS 175 A LEU 176 n 176 LEU 176 A VAL 177 n 177 VAL 177 A ASP 178 n 178 ASP 178 A ILE 179 n 179 ILE 179 A GLN 180 n 180 GLN 180 A TYR 181 n 181 TYR 181 A ALA 182 n 182 ALA 182 A ARG 183 n 183 ARG 183 A ASN 184 n 184 ASN 184 A ASP 185 n 185 ASP 185 A ILE 186 n 186 ILE 186 A ASP 187 n 187 ASP 187 A PHE 188 n 188 PHE 188 A GLN 189 n 189 GLN 189 A ARG 190 n 190 ARG 190 A GLY 191 n 191 GLY 191 A THR 192 n 192 THR 192 A PHE 193 n 193 PHE 193 A ARG 194 n 194 ARG 194 A VAL 195 n 195 VAL 195 A ARG 196 n 196 ARG 196 A GLY 197 n 197 GLY 197 A ASP 198 n 198 ASP 198 A VAL 199 n 199 VAL 199 A VAL 200 n 200 VAL 200 A GLU 201 n 201 GLU 201 A ILE 202 n 202 ILE 202 A PHE 203 n 203 PHE 203 A PRO 204 n 204 PRO 204 A ALA 205 n 205 ALA 205 A SER 206 n 206 SER 206 A ARG 207 n 207 ARG 207 A ASP 208 n 208 ASP 208 A GLU 209 n 209 GLU 209 A HIS 210 n 210 HIS 210 A CYS 211 n 211 CYS 211 A VAL 212 n 212 VAL 212 A ARG 213 n 213 ARG 213 A VAL 214 n 214 VAL 214 A GLU 215 n 215 GLU 215 A PHE 216 n 216 PHE 216 A PHE 217 n 217 PHE 217 A GLY 218 n 218 GLY 218 A ASP 219 n 219 ASP 219 A GLU 220 n 220 GLU 220 A ILE 221 n 221 ILE 221 A GLU 222 n 222 GLU 222 A ARG 223 n 223 ARG 223 A ILE 224 n 224 ILE 224 A ARG 225 n 225 ARG 225 A GLU 226 n 226 GLU 226 A VAL 227 n 227 VAL 227 A ASP 228 n 228 ASP 228 A ALA 229 n 229 ALA 229 A LEU 230 n 230 LEU 230 A THR 231 n 231 THR 231 A GLY 232 n 232 GLY 232 A GLU 233 n 233 GLU 233 A ILE 234 n 234 ILE 234 A LEU 235 n 235 LEU 235 A GLY 236 n 236 GLY 236 A ASP 237 n 237 ASP 237 A ARG 238 n 238 ARG 238 A ASP 239 n 239 ASP 239 A HIS 240 n 240 HIS 240 A VAL 241 n 241 VAL 241 A ALA 242 n 242 ALA 242 A ILE 243 n 243 ILE 243 A PHE 244 n 244 PHE 244 A PRO 245 n 245 PRO 245 A ALA 246 n 246 ALA 246 A SER 247 n 247 SER 247 A HIS 248 n 248 HIS 248 A PHE 249 n 249 PHE 249 A VAL 250 n 250 VAL 250 A THR 251 n 251 THR 251 A ARG 252 n 252 ARG 252 A ALA 253 n 253 ALA 253 A GLU 254 n 254 GLU 254 A LYS 255 n 255 LYS 255 A MET 256 n 256 MET 256 A GLU 257 n 257 GLU 257 A LYS 258 n 258 LYS 258 A ALA 259 n 259 ALA 259 A ILE 260 n 260 ILE 260 A GLN 261 n 261 GLN 261 A ASN 262 n 262 ASN 262 A ILE 263 n 263 ILE 263 A GLU 264 n 264 GLU 264 A LYS 265 n 265 LYS 265 A GLU 266 n 266 GLU 266 A LEU 267 n 267 LEU 267 A GLU 268 n 268 GLU 268 A GLU 269 n 269 GLU 269 A GLN 270 n 270 GLN 270 A LEU 271 n 271 LEU 271 A LYS 272 n 272 LYS 272 A VAL 273 n 273 VAL 273 A MET 274 n 274 MET 274 A HIS 275 n 275 HIS 275 A GLU 276 n 276 GLU 276 A ASN 277 n 277 ASN 277 A GLY 278 n 278 GLY 278 A LYS 279 n 279 LYS 279 A LEU 280 n 280 LEU 280 A LEU 281 n 281 LEU 281 A GLU 282 n 282 GLU 282 A ALA 283 n 283 ALA 283 A GLN 284 n 284 GLN 284 A ARG 285 n 285 ARG 285 A LEU 286 n 286 LEU 286 A GLU 287 n 287 GLU 287 A GLN 288 n 288 GLN 288 A ARG 289 n 289 ARG 289 A THR 290 n 290 THR 290 A ARG 291 n 291 ARG 291 A TYR 292 n 292 TYR 292 A ASP 293 n 293 ASP 293 A LEU 294 n 294 LEU 294 A GLU 295 n 295 GLU 295 A MET 296 n 296 MET 296 A MET 297 n 297 MET 297 A ARG 298 n 298 ARG 298 A GLU 299 n 299 GLU 299 A MET 300 n 300 MET 300 A GLY 301 n 301 GLY 301 A PHE 302 n 302 PHE 302 A CYS 303 n 303 CYS 303 A SER 304 n 304 SER 304 A GLY 305 n 305 GLY 305 A ILE 306 n 306 ILE 306 A GLU 307 n 307 GLU 307 A ASN 308 n 308 ASN 308 A TYR 309 n 309 TYR 309 A SER 310 n 310 SER 310 A ARG 311 n 311 ARG 311 A HIS 312 n 312 HIS 312 A LEU 313 n 313 LEU 313 A THR 314 n 314 THR 314 A LEU 315 n 315 LEU 315 A ARG 316 n 316 ARG 316 A PRO 317 n 317 PRO 317 A PRO 318 n 318 PRO 318 A GLY 319 n 319 GLY 319 A SER 320 n 320 SER 320 A THR 321 n 321 THR 321 A PRO 322 n 322 PRO 322 A TYR 323 n 323 TYR 323 A THR 324 n 324 THR 324 A LEU 325 n 325 LEU 325 A LEU 326 n 326 LEU 326 A ASP 327 n 327 ASP 327 A TYR 328 n 328 TYR 328 A PHE 329 n 329 PHE 329 A PRO 330 n 330 PRO 330 A ASP 331 n 331 ASP 331 A ASP 332 n 332 ASP 332 A PHE 333 n 333 PHE 333 A MET 334 n 334 MET 334 A ILE 335 n 335 ILE 335 A VAL 336 n 336 VAL 336 A VAL 337 n 337 VAL 337 A ASP 338 n 338 ASP 338 A GLU 339 n 339 GLU 339 A SER 340 n 340 SER 340 A HIS 341 n 341 HIS 341 A VAL 342 n 342 VAL 342 A THR 343 n 343 THR 343 A ILE 344 n 344 ILE 344 A PRO 345 n 345 PRO 345 A GLN 346 n 346 GLN 346 A VAL 347 n 347 VAL 347 A ARG 348 n 348 ARG 348 A GLY 349 n 349 GLY 349 A MET 350 n 350 MET 350 A PHE 351 n 351 PHE 351 A ASN 352 n 352 ASN 352 A GLY 353 n 353 GLY 353 A ASP 354 n 354 ASP 354 A GLN 355 n 355 GLN 355 A ALA 356 n 356 ALA 356 A ARG 357 n 357 ARG 357 A LYS 358 n 358 LYS 358 A GLN 359 n 359 GLN 359 A VAL 360 n 360 VAL 360 A LEU 361 n 361 LEU 361 A VAL 362 n 362 VAL 362 A ASP 363 n 363 ASP 363 A HIS 364 n 364 HIS 364 A GLY 365 n 365 GLY 365 A PHE 366 n 366 PHE 366 A ARG 367 n 367 ARG 367 A LEU 368 n 368 LEU 368 A PRO 369 n 369 PRO 369 A SER 370 n 370 SER 370 A ALA 371 n 371 ALA 371 A LEU 372 n 372 LEU 372 A ASP 373 n 373 ASP 373 A ASN 374 n 374 ASN 374 A ARG 375 n 375 ARG 375 A PRO 376 n 376 PRO 376 A LEU 377 n 377 LEU 377 A ARG 378 n 378 ARG 378 A PHE 379 n 379 PHE 379 A GLU 380 n 380 GLU 380 A GLU 381 n 381 GLU 381 A PHE 382 n 382 PHE 382 A GLU 383 n 383 GLU 383 A LYS 384 n 384 LYS 384 A HIS 385 n 385 HIS 385 A MET 386 n 386 MET 386 A HIS 387 n 387 HIS 387 A ASN 388 n 388 ASN 388 A ILE 389 n 389 ILE 389 A VAL 390 n 390 VAL 390 A TYR 391 n 391 TYR 391 A VAL 392 n 392 VAL 392 A SER 393 n 393 SER 393 A ALA 394 n 394 ALA 394 A THR 395 n 395 THR 395 A PRO 396 n 396 PRO 396 A GLY 397 n 397 GLY 397 A PRO 398 n 398 PRO 398 A TYR 399 n 399 TYR 399 A GLU 400 n 400 GLU 400 A ILE 401 n 401 ILE 401 A GLU 402 n 402 GLU 402 A HIS 403 n 403 HIS 403 A THR 404 n 404 THR 404 A ASP 405 n 405 ASP 405 A GLU 406 n 406 GLU 406 A MET 407 n 407 MET 407 A VAL 408 n 408 VAL 408 A GLU 409 n 409 GLU 409 A GLN 410 n 410 GLN 410 A ILE 411 n 411 ILE 411 A ILE 412 n 412 ILE 412 A ARG 413 n 413 ARG 413 A PRO 414 n 414 PRO 414 A THR 415 n 415 THR 415 A GLY 416 n 416 GLY 416 A LEU 417 n 417 LEU 417 A LEU 418 n 418 LEU 418 A ASP 419 n 419 ASP 419 A PRO 420 n 420 PRO 420 A LEU 421 n 421 LEU 421 A ILE 422 n 422 ILE 422 A ASP 423 n 423 ASP 423 A VAL 424 n 424 VAL 424 A ARG 425 n 425 ARG 425 A PRO 426 n 426 PRO 426 A ILE 427 n 427 ILE 427 A GLU 428 n 428 GLU 428 A GLY 429 n 429 GLY 429 A GLN 430 n 430 GLN 430 A ILE 431 n 431 ILE 431 A ASP 432 n 432 ASP 432 A ASP 433 n 433 ASP 433 A LEU 434 n 434 LEU 434 A ILE 435 n 435 ILE 435 A GLY 436 n 436 GLY 436 A GLU 437 n 437 GLU 437 A ILE 438 n 438 ILE 438 A GLN 439 n 439 GLN 439 A ALA 440 n 440 ALA 440 A ARG 441 n 441 ARG 441 A ILE 442 n 442 ILE 442 A GLU 443 n 443 GLU 443 A ARG 444 n 444 ARG 444 A ASN 445 n 445 ASN 445 A GLU 446 n 446 GLU 446 A ARG 447 n 447 ARG 447 A VAL 448 n 448 VAL 448 A LEU 449 n 449 LEU 449 A VAL 450 n 450 VAL 450 A THR 451 n 451 THR 451 A THR 452 n 452 THR 452 A LEU 453 n 453 LEU 453 A THR 454 n 454 THR 454 A LYS 455 n 455 LYS 455 A LYS 456 n 456 LYS 456 A MET 457 n 457 MET 457 A SER 458 n 458 SER 458 A GLU 459 n 459 GLU 459 A ASP 460 n 460 ASP 460 A LEU 461 n 461 LEU 461 A THR 462 n 462 THR 462 A ASP 463 n 463 ASP 463 A TYR 464 n 464 TYR 464 A LEU 465 n 465 LEU 465 A LYS 466 n 466 LYS 466 A GLU 467 n 467 GLU 467 A ILE 468 n 468 ILE 468 A GLY 469 n 469 GLY 469 A ILE 470 n 470 ILE 470 A LYS 471 n 471 LYS 471 A VAL 472 n 472 VAL 472 A ASN 473 n 473 ASN 473 A TYR 474 n 474 TYR 474 A LEU 475 n 475 LEU 475 A HIS 476 n 476 HIS 476 A SER 477 n 477 SER 477 A GLU 478 n 478 GLU 478 A ILE 479 n 479 ILE 479 A LYS 480 n 480 LYS 480 A THR 481 n 481 THR 481 A LEU 482 n 482 LEU 482 A GLU 483 n 483 GLU 483 A ARG 484 n 484 ARG 484 A ILE 485 n 485 ILE 485 A GLU 486 n 486 GLU 486 A ILE 487 n 487 ILE 487 A ILE 488 n 488 ILE 488 A ARG 489 n 489 ARG 489 A ASP 490 n 490 ASP 490 A LEU 491 n 491 LEU 491 A ARG 492 n 492 ARG 492 A LEU 493 n 493 LEU 493 A GLY 494 n 494 GLY 494 A LYS 495 n 495 LYS 495 A TYR 496 n 496 TYR 496 A ASP 497 n 497 ASP 497 A VAL 498 n 498 VAL 498 A LEU 499 n 499 LEU 499 A VAL 500 n 500 VAL 500 A GLY 501 n 501 GLY 501 A ILE 502 n 502 ILE 502 A ASN 503 n 503 ASN 503 A LEU 504 n 504 LEU 504 A LEU 505 n 505 LEU 505 A ARG 506 n 506 ARG 506 A GLU 507 n 507 GLU 507 A GLY 508 n 508 GLY 508 A LEU 509 n 509 LEU 509 A ASP 510 n 510 ASP 510 A ILE 511 n 511 ILE 511 A PRO 512 n 512 PRO 512 A GLU 513 n 513 GLU 513 A VAL 514 n 514 VAL 514 A SER 515 n 515 SER 515 A LEU 516 n 516 LEU 516 A VAL 517 n 517 VAL 517 A ALA 518 n 518 ALA 518 A ILE 519 n 519 ILE 519 A LEU 520 n 520 LEU 520 A ASP 521 n 521 ASP 521 A ALA 522 n 522 ALA 522 A ASP 523 n 523 ASP 523 A LYS 524 n 524 LYS 524 A GLU 525 n 525 GLU 525 A GLY 526 n 526 GLY 526 A PHE 527 n 527 PHE 527 A LEU 528 n 528 LEU 528 A ARG 529 n 529 ARG 529 A SER 530 n 530 SER 530 A GLU 531 n 531 GLU 531 A ARG 532 n 532 ARG 532 A SER 533 n 533 SER 533 A LEU 534 n 534 LEU 534 A ILE 535 n 535 ILE 535 A GLN 536 n 536 GLN 536 A THR 537 n 537 THR 537 A ILE 538 n 538 ILE 538 A GLY 539 n 539 GLY 539 A ARG 540 n 540 ARG 540 A ALA 541 n 541 ALA 541 A ALA 542 n 542 ALA 542 A ARG 543 n 543 ARG 543 A ASN 544 n 544 ASN 544 A ALA 545 n 545 ALA 545 A GLU 546 n 546 GLU 546 A GLY 547 n 547 GLY 547 A ARG 548 n 548 ARG 548 A VAL 549 n 549 VAL 549 A ILE 550 n 550 ILE 550 A MET 551 n 551 MET 551 A TYR 552 n 552 TYR 552 A ALA 553 n 553 ALA 553 A ASP 554 n 554 ASP 554 A LYS 555 n 555 LYS 555 A ILE 556 n 556 ILE 556 A THR 557 n 557 THR 557 A LYS 558 n 558 LYS 558 A SER 559 n 559 SER 559 A MET 560 n 560 MET 560 A GLU 561 n 561 GLU 561 A ILE 562 n 562 ILE 562 A ALA 563 n 563 ALA 563 A ILE 564 n 564 ILE 564 A ASN 565 n 565 ASN 565 A GLU 566 n 566 GLU 566 A THR 567 n 567 THR 567 A LYS 568 n 568 LYS 568 A ARG 569 n 569 ARG 569 A ARG 570 n 570 ARG 570 A ARG 571 n 571 ARG 571 A GLU 572 n 572 GLU 572 A GLN 573 n 573 GLN 573 A GLN 574 n 574 GLN 574 A GLU 575 n 575 GLU 575 A ARG 576 n 576 ARG 576 A PHE 577 n 577 PHE 577 A ASN 578 n 578 ASN 578 A GLU 579 n 579 GLU 579 A GLU 580 n 580 GLU 580 A HIS 581 n 581 HIS 581 A GLY 582 n 582 GLY 582 A ILE 583 n 583 ILE 583 A THR 584 n 584 THR 584 A PRO 585 n 585 PRO 585 A LYS 586 n 586 LYS 586 A THR 587 n 587 THR 587 A ILE 588 n 588 ILE 588 A ASN 589 n 589 ASN 589 A n 590 590 A n 591 591 A n 592 592 A n 593 593 A n 594 594 A n 595 595 A n 596 596 A n 597 597 A n 598 598 A n 599 599 A n 600 600 A n 601 601 A n 602 602 A n 603 603 A n 604 604 A n 605 605 A n 606 606 A n 607 607 A n 608 608 A n 609 609 A n 610 610 A n 611 611 A n 612 612 A n 613 613 A n 614 614 A n 615 615 A n 616 616 A n 617 617 A n 618 618 A n 619 619 A n 620 620 A LYS 621 n 621 LYS 621 A LYS 622 n 622 LYS 622 A GLU 623 n 623 GLU 623 A ARG 624 n 624 ARG 624 A GLN 625 n 625 GLN 625 A LYS 626 n 626 LYS 626 A VAL 627 n 627 VAL 627 A VAL 628 n 628 VAL 628 A GLU 629 n 629 GLU 629 A GLN 630 n 630 GLN 630 A MET 631 n 631 MET 631 A GLU 632 n 632 GLU 632 A HIS 633 n 633 HIS 633 A GLU 634 n 634 GLU 634 A MET 635 n 635 MET 635 A LYS 636 n 636 LYS 636 A GLU 637 n 637 GLU 637 A ALA 638 n 638 ALA 638 A ALA 639 n 639 ALA 639 A LYS 640 n 640 LYS 640 A ALA 641 n 641 ALA 641 A LEU 642 n 642 LEU 642 A ASP 643 n 643 ASP 643 A PHE 644 n 644 PHE 644 A GLU 645 n 645 GLU 645 A ARG 646 n 646 ARG 646 A ALA 647 n 647 ALA 647 A ALA 648 n 648 ALA 648 A GLU 649 n 649 GLU 649 A LEU 650 n 650 LEU 650 A ARG 651 n 651 ARG 651 A ASP 652 n 652 ASP 652 A LEU 653 n 653 LEU 653 A LEU 654 n 654 LEU 654 A n 655 655 A n 656 656 A n 657 657 A n 658 658 A n 659 659 A n 660 660 A n 661 661 A LYS 622 n 1 LYS 622 B GLU 623 n 2 GLU 623 B ARG 624 n 3 ARG 624 B GLN 625 n 4 GLN 625 B LYS 626 n 5 LYS 626 B VAL 627 n 6 VAL 627 B VAL 628 n 7 VAL 628 B GLU 629 n 8 GLU 629 B GLN 630 n 9 GLN 630 B MET 631 n 10 MET 631 B GLU 632 n 11 GLU 632 B HIS 633 n 12 HIS 633 B GLU 634 n 13 GLU 634 B MET 635 n 14 MET 635 B LYS 636 n 15 LYS 636 B GLU 637 n 16 GLU 637 B ALA 638 n 17 ALA 638 B ALA 639 n 18 ALA 639 B LYS 640 n 19 LYS 640 B ALA 641 n 20 ALA 641 B LEU 642 n 21 LEU 642 B ASP 643 n 22 ASP 643 B PHE 644 n 23 PHE 644 B GLU 645 n 24 GLU 645 B ARG 646 n 25 ARG 646 B ALA 647 n 26 ALA 647 B ALA 648 n 27 ALA 648 B GLU 649 n 28 GLU 649 B LEU 650 n 29 LEU 650 B ARG 651 n 30 ARG 651 B ASP 652 n 31 ASP 652 B LEU 653 n 32 LEU 653 B LEU 654 n 33 LEU 654 B LEU 655 n 34 LEU 655 B GLU 656 n 35 GLU 656 B LEU 657 n 36 LEU 657 B LYS 658 n 37 LYS 658 B ALA 659 n 38 ALA 659 B author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N PHE 89 B N PHE 89 A O ILE 139 B O ILE 139 A O ILE 138 B O ILE 138 A N VAL 62 B N VAL 62 A N LEU 61 B N LEU 61 A O VAL 336 B O VAL 336 A N ILE 335 B N ILE 335 A O VAL 390 B O VAL 390 A O TYR 391 B O TYR 391 A N LEU 37 B N LEU 37 A N LEU 38 B N LEU 38 A O VAL 408 B O VAL 408 A N ASP 94 B N ASP 94 A O SER 114 B O SER 114 A N ALA 100 B N ALA 100 A O ILE 109 B O ILE 109 A N LEU 161 B N LEU 161 A O VAL 241 B O VAL 241 A N ALA 182 B N ALA 182 A O PHE 193 B O PHE 193 A N ARG 194 B N ARG 194 A O GLU 201 B O GLU 201 A N VAL 200 B N VAL 200 A O VAL 214 B O VAL 214 A N GLU 215 B N GLU 215 A O GLU 222 B O GLU 222 A N GLU 226 B N GLU 226 A O LEU 235 B O LEU 235 A N ASP 423 B N ASP 423 A O MET 551 B O MET 551 A O ILE 550 B O ILE 550 A N ILE 519 B N ILE 519 A O ALA 518 B O ALA 518 A N LEU 449 B N LEU 449 A N VAL 450 B N VAL 450 A O LEU 499 B O LEU 499 A O VAL 500 B O VAL 500 A N LEU 475 B N LEU 475 1 D C5' DT 5 A C5' DT 5 1 Y 1 D C4' DT 5 A C4' DT 5 1 Y 1 D O4' DT 5 A O4' DT 5 1 Y 1 D C3' DT 5 A C3' DT 5 1 Y 1 D O3' DT 5 A O3' DT 5 1 Y 1 D C2' DT 5 A C2' DT 5 1 Y 1 D C1' DT 5 A C1' DT 5 1 Y 1 D N1 DT 5 A N1 DT 5 1 Y 1 D C2 DT 5 A C2 DT 5 1 Y 1 D O2 DT 5 A O2 DT 5 1 Y 1 D N3 DT 5 A N3 DT 5 1 Y 1 D C4 DT 5 A C4 DT 5 1 Y 1 D O4 DT 5 A O4 DT 5 1 Y 1 D C5 DT 5 A C5 DT 5 1 Y 1 D C7 DT 5 A C7 DT 5 1 Y 1 D C6 DT 5 A C6 DT 5 1 Y 1 A CG ARG 4 B CG ARG 4 1 Y 1 A CD ARG 4 B CD ARG 4 1 Y 1 A NE ARG 4 B NE ARG 4 1 Y 1 A CZ ARG 4 B CZ ARG 4 1 Y 1 A NH1 ARG 4 B NH1 ARG 4 1 Y 1 A NH2 ARG 4 B NH2 ARG 4 1 Y 1 A CG ASP 94 B CG ASP 94 1 Y 1 A OD1 ASP 94 B OD1 ASP 94 1 Y 1 A OD2 ASP 94 B OD2 ASP 94 1 Y 1 A CG TYR 95 B CG TYR 95 1 Y 1 A CD1 TYR 95 B CD1 TYR 95 1 Y 1 A CD2 TYR 95 B CD2 TYR 95 1 Y 1 A CE1 TYR 95 B CE1 TYR 95 1 Y 1 A CE2 TYR 95 B CE2 TYR 95 1 Y 1 A CZ TYR 95 B CZ TYR 95 1 Y 1 A OH TYR 95 B OH TYR 95 1 Y 1 A CG GLN 104 B CG GLN 104 1 Y 1 A CD GLN 104 B CD GLN 104 1 Y 1 A OE1 GLN 104 B OE1 GLN 104 1 Y 1 A NE2 GLN 104 B NE2 GLN 104 1 Y 1 A CG LYS 111 B CG LYS 111 1 Y 1 A CD LYS 111 B CD LYS 111 1 Y 1 A CE LYS 111 B CE LYS 111 1 Y 1 A NZ LYS 111 B NZ LYS 111 1 Y 1 A CB GLU 153 B CB GLU 153 1 Y 1 A CG GLU 153 B CG GLU 153 1 Y 1 A CD GLU 153 B CD GLU 153 1 Y 1 A OE1 GLU 153 B OE1 GLU 153 1 Y 1 A OE2 GLU 153 B OE2 GLU 153 1 Y 1 A CG ARG 155 B CG ARG 155 1 Y 1 A CD ARG 155 B CD ARG 155 1 Y 1 A NE ARG 155 B NE ARG 155 1 Y 1 A CZ ARG 155 B CZ ARG 155 1 Y 1 A NH1 ARG 155 B NH1 ARG 155 1 Y 1 A NH2 ARG 155 B NH2 ARG 155 1 Y 1 A CG MET 157 B CG MET 157 1 Y 1 A SD MET 157 B SD MET 157 1 Y 1 A CE MET 157 B CE MET 157 1 Y 1 A CG GLU 166 B CG GLU 166 1 Y 1 A CD GLU 166 B CD GLU 166 1 Y 1 A OE1 GLU 166 B OE1 GLU 166 1 Y 1 A OE2 GLU 166 B OE2 GLU 166 1 Y 1 A CG1 ILE 186 B CG1 ILE 186 1 Y 1 A CG2 ILE 186 B CG2 ILE 186 1 Y 1 A CD1 ILE 186 B CD1 ILE 186 1 Y 1 A CG LEU 230 B CG LEU 230 1 Y 1 A CD1 LEU 230 B CD1 LEU 230 1 Y 1 A CD2 LEU 230 B CD2 LEU 230 1 Y 1 A CG PHE 249 B CG PHE 249 1 Y 1 A CD1 PHE 249 B CD1 PHE 249 1 Y 1 A CD2 PHE 249 B CD2 PHE 249 1 Y 1 A CE1 PHE 249 B CE1 PHE 249 1 Y 1 A CE2 PHE 249 B CE2 PHE 249 1 Y 1 A CZ PHE 249 B CZ PHE 249 1 Y 1 A CG GLU 254 B CG GLU 254 1 Y 1 A CD GLU 254 B CD GLU 254 1 Y 1 A OE1 GLU 254 B OE1 GLU 254 1 Y 1 A OE2 GLU 254 B OE2 GLU 254 1 Y 1 A CG LYS 255 B CG LYS 255 1 Y 1 A CD LYS 255 B CD LYS 255 1 Y 1 A CE LYS 255 B CE LYS 255 1 Y 1 A NZ LYS 255 B NZ LYS 255 1 Y 1 A CG GLU 257 B CG GLU 257 1 Y 1 A CD GLU 257 B CD GLU 257 1 Y 1 A OE1 GLU 257 B OE1 GLU 257 1 Y 1 A OE2 GLU 257 B OE2 GLU 257 1 Y 1 A CG GLN 284 B CG GLN 284 1 Y 1 A CD GLN 284 B CD GLN 284 1 Y 1 A OE1 GLN 284 B OE1 GLN 284 1 Y 1 A NE2 GLN 284 B NE2 GLN 284 1 Y 1 A CG GLU 295 B CG GLU 295 1 Y 1 A CD GLU 295 B CD GLU 295 1 Y 1 A OE1 GLU 295 B OE1 GLU 295 1 Y 1 A OE2 GLU 295 B OE2 GLU 295 1 Y 1 A CG GLU 406 B CG GLU 406 1 Y 1 A CD GLU 406 B CD GLU 406 1 Y 1 A OE1 GLU 406 B OE1 GLU 406 1 Y 1 A OE2 GLU 406 B OE2 GLU 406 1 Y 1 A CG LYS 455 B CG LYS 455 1 Y 1 A CD LYS 455 B CD LYS 455 1 Y 1 A CE LYS 455 B CE LYS 455 1 Y 1 A NZ LYS 455 B NZ LYS 455 1 Y 1 A CG LYS 456 B CG LYS 456 1 Y 1 A CD LYS 456 B CD LYS 456 1 Y 1 A CE LYS 456 B CE LYS 456 1 Y 1 A NZ LYS 456 B NZ LYS 456 1 Y 1 A CG GLU 467 B CG GLU 467 1 Y 1 A CD GLU 467 B CD GLU 467 1 Y 1 A OE1 GLU 467 B OE1 GLU 467 1 Y 1 A OE2 GLU 467 B OE2 GLU 467 1 Y 1 A CG HIS 476 B CG HIS 476 1 Y 1 A ND1 HIS 476 B ND1 HIS 476 1 Y 1 A CD2 HIS 476 B CD2 HIS 476 1 Y 1 A CE1 HIS 476 B CE1 HIS 476 1 Y 1 A NE2 HIS 476 B NE2 HIS 476 1 Y 1 A CG GLU 478 B CG GLU 478 1 Y 1 A CD GLU 478 B CD GLU 478 1 Y 1 A OE1 GLU 478 B OE1 GLU 478 1 Y 1 A OE2 GLU 478 B OE2 GLU 478 1 Y 1 A CG LYS 480 B CG LYS 480 1 Y 1 A CD LYS 480 B CD LYS 480 1 Y 1 A CE LYS 480 B CE LYS 480 1 Y 1 A NZ LYS 480 B NZ LYS 480 1 Y 1 A CG ARG 484 B CG ARG 484 1 Y 1 A CD ARG 484 B CD ARG 484 1 Y 1 A NE ARG 484 B NE ARG 484 1 Y 1 A CZ ARG 484 B CZ ARG 484 1 Y 1 A NH1 ARG 484 B NH1 ARG 484 1 Y 1 A NH2 ARG 484 B NH2 ARG 484 1 Y 1 A CG ARG 489 B CG ARG 489 1 Y 1 A CD ARG 489 B CD ARG 489 1 Y 1 A NE ARG 489 B NE ARG 489 1 Y 1 A CZ ARG 489 B CZ ARG 489 1 Y 1 A NH1 ARG 489 B NH1 ARG 489 1 Y 1 A NH2 ARG 489 B NH2 ARG 489 1 Y 1 A CG ARG 506 B CG ARG 506 1 Y 1 A CD ARG 506 B CD ARG 506 1 Y 1 A NE ARG 506 B NE ARG 506 1 Y 1 A CZ ARG 506 B CZ ARG 506 1 Y 1 A NH1 ARG 506 B NH1 ARG 506 1 Y 1 A NH2 ARG 506 B NH2 ARG 506 1 Y 1 A CG LYS 586 B CG LYS 586 1 Y 1 A CD LYS 586 B CD LYS 586 1 Y 1 A CE LYS 586 B CE LYS 586 1 Y 1 A NZ LYS 586 B NZ LYS 586 1 Y 1 A CG ASN 589 B CG ASN 589 1 Y 1 A OD1 ASN 589 B OD1 ASN 589 1 Y 1 A ND2 ASN 589 B ND2 ASN 589 1 Y 1 A CG LYS 621 B CG LYS 621 1 Y 1 A CD LYS 621 B CD LYS 621 1 Y 1 A CE LYS 621 B CE LYS 621 1 Y 1 A NZ LYS 621 B NZ LYS 621 1 Y 1 A CG LYS 622 B CG LYS 622 1 Y 1 A CD LYS 622 B CD LYS 622 1 Y 1 A CE LYS 622 B CE LYS 622 1 Y 1 A NZ LYS 622 B NZ LYS 622 1 Y 1 A CG GLU 623 B CG GLU 623 1 Y 1 A CD GLU 623 B CD GLU 623 1 Y 1 A OE1 GLU 623 B OE1 GLU 623 1 Y 1 A OE2 GLU 623 B OE2 GLU 623 1 Y 1 A CG ARG 624 B CG ARG 624 1 Y 1 A CD ARG 624 B CD ARG 624 1 Y 1 A NE ARG 624 B NE ARG 624 1 Y 1 A CZ ARG 624 B CZ ARG 624 1 Y 1 A NH1 ARG 624 B NH1 ARG 624 1 Y 1 A NH2 ARG 624 B NH2 ARG 624 1 Y 1 A CG GLN 625 B CG GLN 625 1 Y 1 A CD GLN 625 B CD GLN 625 1 Y 1 A OE1 GLN 625 B OE1 GLN 625 1 Y 1 A NE2 GLN 625 B NE2 GLN 625 1 Y 1 A CG LYS 626 B CG LYS 626 1 Y 1 A CD LYS 626 B CD LYS 626 1 Y 1 A CE LYS 626 B CE LYS 626 1 Y 1 A NZ LYS 626 B NZ LYS 626 1 Y 1 A CG1 VAL 627 B CG1 VAL 627 1 Y 1 A CG2 VAL 627 B CG2 VAL 627 1 Y 1 A CG GLU 629 B CG GLU 629 1 Y 1 A CD GLU 629 B CD GLU 629 1 Y 1 A OE1 GLU 629 B OE1 GLU 629 1 Y 1 A OE2 GLU 629 B OE2 GLU 629 1 Y 1 A CG GLN 630 B CG GLN 630 1 Y 1 A CD GLN 630 B CD GLN 630 1 Y 1 A OE1 GLN 630 B OE1 GLN 630 1 Y 1 A NE2 GLN 630 B NE2 GLN 630 1 Y 1 A CG GLU 634 B CG GLU 634 1 Y 1 A CD GLU 634 B CD GLU 634 1 Y 1 A OE1 GLU 634 B OE1 GLU 634 1 Y 1 A OE2 GLU 634 B OE2 GLU 634 1 Y 1 A CG LYS 636 B CG LYS 636 1 Y 1 A CD LYS 636 B CD LYS 636 1 Y 1 A CE LYS 636 B CE LYS 636 1 Y 1 A NZ LYS 636 B NZ LYS 636 1 Y 1 B CG LYS 622 C CG LYS 1 1 Y 1 B CD LYS 622 C CD LYS 1 1 Y 1 B CE LYS 622 C CE LYS 1 1 Y 1 B NZ LYS 622 C NZ LYS 1 1 Y 1 B CG GLN 625 C CG GLN 4 1 Y 1 B CD GLN 625 C CD GLN 4 1 Y 1 B OE1 GLN 625 C OE1 GLN 4 1 Y 1 B NE2 GLN 625 C NE2 GLN 4 1 Y 1 B CG LYS 636 C CG LYS 15 1 Y 1 B CD LYS 636 C CD LYS 15 1 Y 1 B CE LYS 636 C CE LYS 15 1 Y 1 B NZ LYS 636 C NZ LYS 15 1 Y 1 D C14 FLU 600 E C14 FLU 1 1 N 1 D C15 FLU 600 E C15 FLU 1 1 N 1 D C16 FLU 600 E C16 FLU 1 1 N 1 D C17 FLU 600 E C17 FLU 1 1 N 1 D C18 FLU 600 E C18 FLU 1 1 N 1 D C19 FLU 600 E C19 FLU 1 1 N 1 D C20 FLU 600 E C20 FLU 1 1 N 1 D O4 FLU 600 E O4 FLU 1 1 N 1 D O5 FLU 600 E O5 FLU 1 1 N 1 A MET 1 B MET 1 1 Y 1 A LYS 2 B LYS 2 1 Y 1 A SER 9 B SER 9 1 Y 1 A LYS 590 B LYS 590 1 Y 1 A GLU 591 B GLU 591 1 Y 1 A ILE 592 B ILE 592 1 Y 1 A ARG 593 B ARG 593 1 Y 1 A ASP 594 B ASP 594 1 Y 1 A VAL 595 B VAL 595 1 Y 1 A ILE 596 B ILE 596 1 Y 1 A ARG 597 B ARG 597 1 Y 1 A ALA 598 B ALA 598 1 Y 1 A THR 599 B THR 599 1 Y 1 A VAL 600 B VAL 600 1 Y 1 A ALA 601 B ALA 601 1 Y 1 A ALA 602 B ALA 602 1 Y 1 A GLU 603 B GLU 603 1 Y 1 A ASP 604 B ASP 604 1 Y 1 A LYS 605 B LYS 605 1 Y 1 A ALA 606 B ALA 606 1 Y 1 A GLU 607 B GLU 607 1 Y 1 A TYR 608 B TYR 608 1 Y 1 A LYS 609 B LYS 609 1 Y 1 A THR 610 B THR 610 1 Y 1 A LYS 611 B LYS 611 1 Y 1 A ALA 612 B ALA 612 1 Y 1 A ALA 613 B ALA 613 1 Y 1 A PRO 614 B PRO 614 1 Y 1 A LYS 615 B LYS 615 1 Y 1 A LEU 616 B LEU 616 1 Y 1 A SER 617 B SER 617 1 Y 1 A LYS 618 B LYS 618 1 Y 1 A MET 619 B MET 619 1 Y 1 A THR 620 B THR 620 1 Y 1 A LEU 655 B LEU 655 1 Y 1 A GLU 656 B GLU 656 1 Y 1 A LEU 657 B LEU 657 1 Y 1 A LYS 658 B LYS 658 1 Y 1 A ALA 659 B ALA 659 1 Y 1 A GLU 660 B GLU 660 1 Y 1 A GLY 661 B GLY 661 1 Y 1 9.52 0.30 108.30 117.82 D D D O4' C1' N1 DT DT DT 1 1 1 N 1 3.55 0.30 108.30 111.85 D D D O4' C1' N1 DT DT DT 2 2 2 N 1 -16.40 1.90 104.00 87.60 D D D O3' P O5' DT DT DT 2 3 3 Y 1 21.74 1.10 110.50 132.24 D D D O3' P OP2 DT DT DT 2 3 3 Y 1 3.02 0.30 108.30 111.32 D D D O4' C1' N1 DT DT DT 3 3 3 N 1 4.69 0.60 114.60 119.29 D D D N1 C2 N3 DT DT DT 3 3 3 N 1 -7.00 0.60 127.20 120.20 D D D C2 N3 C4 DT DT DT 3 3 3 N 1 5.53 0.60 115.20 120.73 D D D N3 C4 C5 DT DT DT 3 3 3 N 1 -3.77 0.60 122.30 118.53 D D D N3 C2 O2 DT DT DT 3 3 3 N 1 4.21 0.60 119.00 123.21 D D D C4 C5 C7 DT DT DT 3 3 3 N 1 -12.95 1.20 119.70 106.75 D D D C3' O3' P DT DT DT 3 3 4 Y 1 -19.43 1.90 104.00 84.57 D D D O3' P O5' DT DT DT 3 4 4 Y 1 10.34 1.10 110.50 120.84 D D D O3' P OP2 DT DT DT 3 4 4 Y 1 5.50 0.90 118.30 123.80 A A A CB CG OD2 ASP ASP ASP 120 120 120 N 1 9.36 1.50 119.30 128.66 A A A C N CA ARG PRO PRO 316 317 317 Y 1 D D C6 N1 DT DT 3 3 -0.045 0.007 1.378 1.333 N 1 D D C5 C7 DT DT 3 3 0.068 0.006 1.496 1.564 N 1 A PRO 13 -35.92 119.14 1 A ALA 113 -174.66 128.71 1 A SER 141 -89.47 -159.50 1 A ILE 167 173.12 130.32 1 A GLN 180 81.30 14.54 1 A GLU 209 -144.27 -42.94 1 A ASP 219 -106.86 62.89 1 A LEU 315 54.62 19.98 1 A HIS 387 -76.88 -77.05 1 A SER 393 -172.58 137.90 1 A LEU 417 -34.40 126.62 1 A GLN 430 -21.85 -69.27 1 A ASN 445 33.08 56.55 1 A ILE 502 -94.76 -61.33 1 A GLU 525 52.65 -126.83 1 A GLU 579 -55.02 -70.57 1 A GLU 580 -48.21 -17.89 1 A PRO 585 -44.75 100.31 48.348 1.21 0.00 0.00 -2.04 0.00 0.82 0.901 0.852 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.28074 0.22428 0.22706 0.22706 2.95 68.36 755 15109 14309 5.0 98.83 20.806 0.400 RANDOM 1 THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT 0.515 0.80 0.80 1.20 PDB ENTRY 2D7D MAXIMUM LIKELIHOOD MASK 0.39 2.95 68.36 0 5311 48 84 5179 0.016 0.022 5403 1.713 2.002 7315 6.527 5.000 654 36.008 24.038 260 20.405 15.000 938 18.861 15.000 47 0.101 0.200 829 0.005 0.020 4055 0.246 0.200 2515 0.323 0.200 3670 0.169 0.200 182 0.243 0.200 80 0.181 0.200 4 0.696 1.500 3356 1.234 2.000 5264 1.799 3.000 2317 3.052 4.500 2051 0.359 0.265 3.026 71 1010 1087 20 99.17 73.7 2.95 68.36 2NMV 15109 2.0 2.0 0.094 0.094 1 15.9 5.3 99.1 0.369 2.95 3.03 5.2 1087 0.369 5.5 99.3 refinement REFMAC 5.2.0005 data collection ADSC QUANTUM data reduction MOSFLM data scaling CCP4 (SCALA) phasing MOLREP Damage detection by the UvrABC pathway: Crystal structure of UvrB bound to fluorescein-adducted DNA 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N A ASP 16 B ASP 16 HELX_P A GLU 30 B GLU 30 1 1 15 A GLY 44 B GLY 44 HELX_P A ASN 57 B ASN 57 1 2 14 A ASN 66 B ASN 66 HELX_P A PHE 81 B PHE 81 1 3 16 A ASN 116 B ASN 116 HELX_P A ARG 133 B ARG 133 1 4 18 A VAL 142 B VAL 142 HELX_P A TYR 146 B TYR 146 5 5 5 A SER 150 B SER 150 HELX_P A VAL 158 B VAL 158 1 6 9 A GLU 168 B GLU 168 HELX_P A ASP 178 B ASP 178 1 7 11 A ARG 252 B ARG 252 HELX_P A ASN 277 B ASN 277 1 8 26 A LYS 279 B LYS 279 HELX_P A GLY 301 B GLY 301 1 9 23 A GLY 305 B GLY 305 HELX_P A ASN 308 B ASN 308 5 10 4 A TYR 309 B TYR 309 HELX_P A THR 314 B THR 314 1 11 6 A THR 324 B THR 324 HELX_P A PHE 329 B PHE 329 1 12 6 A GLU 339 B GLU 339 HELX_P A HIS 364 B HIS 364 1 13 26 A LEU 368 B LEU 368 HELX_P A ASN 374 B ASN 374 5 14 7 A ARG 378 B ARG 378 HELX_P A LYS 384 B LYS 384 1 15 7 A GLY 397 B GLY 397 HELX_P A THR 404 B THR 404 1 16 8 A GLY 429 B GLY 429 HELX_P A GLU 443 B GLU 443 1 17 15 A THR 454 B THR 454 HELX_P A ILE 468 B ILE 468 1 18 15 A LYS 480 B LYS 480 HELX_P A GLY 494 B GLY 494 1 19 15 A ASP 521 B ASP 521 HELX_P A GLU 525 B GLU 525 5 20 5 A SER 530 B SER 530 HELX_P A ARG 540 B ARG 540 1 21 11 A ALA 541 B ALA 541 HELX_P A ASN 544 B ASN 544 5 22 4 A THR 557 B THR 557 HELX_P A GLY 582 B GLY 582 1 23 26 A LYS 621 B LYS 621 HELX_P A ALA 641 B ALA 641 1 24 21 A ASP 643 B ASP 643 HELX_P A LEU 654 B LEU 654 1 25 12 B LYS 622 C LYS 1 HELX_P B ALA 641 C ALA 20 1 26 20 B ASP 643 C ASP 22 HELX_P B ALA 659 C ALA 38 1 27 17 covale 1.568 none D DT 3 A C7 DT 3 1_555 D NML 103 D C1 NML 1_555 HYDROLASE/DNA Protein-DNA complex, T-fluorescein, hairpin, HYDROLASE-DNA COMPLEX UVRB_BACSU UNP 2 1 P37954 MKDRFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEF FPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPEEYREMVVS LRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCVRVEFFGDEIERIREVDALTGEILGDRDH VAIFPASHFVTRAEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGS TPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYE IEHTDEMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITKSM EIAINETKRRREQQERFNEEHGITPKTINKEIRDVIRATVAAEDKAEYKTKAAPKLSKMTKKERQKVVEQMEHEMKEAAK ALDFERAAELRDLLLELKAEG UVRB_BACSU UNP 3 622 P37954 KERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKA 2NMV PDB 1 2NMV 1 661 2NMV 1 661 P37954 A 1 1 661 622 659 2NMV 622 659 P37954 B 2 1 38 1 5 2NMV 1 5 2NMV D 3 1 5 7 2 2 2 6 6 parallel parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel parallel parallel parallel parallel A ALA 85 B ALA 85 A PHE 89 B PHE 89 A VAL 136 B VAL 136 A ALA 140 B ALA 140 A THR 60 B THR 60 A ILE 63 B ILE 63 A MET 334 B MET 334 A ASP 338 B ASP 338 A ASN 388 B ASN 388 A VAL 392 B VAL 392 A HIS 34 B HIS 34 A GLY 39 B GLY 39 A VAL 408 B VAL 408 A GLN 410 B GLN 410 A TYR 93 B TYR 93 A GLN 97 B GLN 97 A ASP 112 B ASP 112 A ILE 115 B ILE 115 A ALA 100 B ALA 100 A TYR 101 B TYR 101 A PHE 108 B PHE 108 A ILE 109 B ILE 109 A VAL 159 B VAL 159 A ARG 162 B ARG 162 A HIS 240 B HIS 240 A ILE 243 B ILE 243 A ALA 182 B ALA 182 A ARG 183 B ARG 183 A THR 192 B THR 192 A ARG 196 B ARG 196 A VAL 199 B VAL 199 A ILE 202 B ILE 202 A HIS 210 B HIS 210 A PHE 216 B PHE 216 A ILE 221 B ILE 221 A ASP 228 B ASP 228 A ILE 234 B ILE 234 A ARG 238 B ARG 238 A LEU 421 B LEU 421 A ARG 425 B ARG 425 A ARG 548 B ARG 548 A TYR 552 B TYR 552 A VAL 514 B VAL 514 A ILE 519 B ILE 519 A ARG 447 B ARG 447 A THR 451 B THR 451 A VAL 498 B VAL 498 A GLY 501 B GLY 501 A VAL 472 B VAL 472 A LEU 475 B LEU 475 BINDING SITE FOR RESIDUE ADP A 662 A ADP 662 Software 13 BINDING SITE FOR RESIDUE NML D 103 D NML 103 Software 2 BINDING SITE FOR RESIDUE FLU D 600 D FLU 600 Software 5 A TYR 11 B TYR 11 13 1_555 A GLN 12 B GLN 12 13 1_555 A GLN 14 B GLN 14 13 1_555 A GLN 17 B GLN 17 13 1_555 A ALA 40 B ALA 40 13 1_555 A GLY 42 B GLY 42 13 1_555 A THR 43 B THR 43 13 1_555 A GLY 44 B GLY 44 13 1_555 A LYS 45 B LYS 45 13 1_555 A THR 46 B THR 46 13 1_555 A PHE 47 B PHE 47 13 1_555 A PRO 414 B PRO 414 13 1_555 A ARG 543 B ARG 543 13 1_555 D DT 2 A DT 2 2 1_555 D DT 3 A DT 3 2 1_555 A GLY 71 B GLY 71 5 1_555 A TYR 74 B TYR 74 5 1_555 A SER 75 B SER 75 5 1_555 A ASN 116 B ASN 116 5 1_555 A ILE 119 B ILE 119 5 1_555 19 P 21 21 21