0.013439
0.000000
0.000000
0.000000
0.010461
0.000000
0.000000
0.000000
0.010217
0.00000
0.00000
0.00000
Waters, T.R.
Eryilmaz, J.
Geddes, S.
Barrett, T.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
74.410
95.597
97.878
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C20 H12 O5
332.306
2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID
FLUORESCEIN
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C3 H7 N O
73.094
N-METHYLACETAMIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
O
N
131
N
P
N
132
N
O
N
133
N
O
N
134
N
O
N
135
N
C
N
136
R
C
N
137
N
O
N
138
S
C
N
139
N
O
N
140
N
C
N
141
R
C
N
142
N
N
N
143
N
C
N
144
N
O
N
145
N
N
N
146
N
C
N
147
N
O
N
148
N
C
N
149
N
C
N
150
N
C
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
Y
166
N
C
N
167
N
O
Y
168
N
C
Y
169
N
C
Y
170
N
O
Y
171
N
C
Y
172
N
C
Y
173
N
C
N
174
N
O
Y
175
N
C
Y
176
N
C
Y
177
N
C
Y
178
N
C
Y
179
N
C
Y
180
N
C
Y
181
N
C
Y
182
N
C
Y
183
N
C
Y
184
N
C
Y
185
N
C
Y
186
N
C
Y
187
N
C
N
188
N
C
N
189
N
O
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
O
N
211
N
N
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
N
228
N
C
N
229
N
C
N
230
N
O
N
231
N
O
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
N
N
243
N
C
N
244
N
C
N
245
N
O
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
Y
257
N
C
Y
258
N
N
Y
259
N
C
Y
260
N
C
Y
261
N
N
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
S
C
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
N
C
N
322
N
C
N
323
N
C
N
324
N
C
N
325
N
N
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
C
N
348
N
S
N
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
C
N
363
N
C
N
364
N
O
N
365
N
N
N
366
N
C
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
N
C
N
402
N
C
N
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
N
419
N
O
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
N
N
429
S
C
N
430
N
C
N
431
N
O
N
432
R
C
N
433
N
O
N
434
N
C
N
435
N
O
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
N
N
446
S
C
N
447
N
C
N
448
N
O
N
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
C
Y
453
N
C
Y
454
N
C
Y
455
N
C
N
456
N
O
N
457
N
O
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
N
N
470
S
C
N
471
N
C
N
472
N
O
N
473
N
C
N
474
N
C
N
475
N
C
N
476
N
O
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
Y
165
N
doub
Y
166
N
sing
N
167
N
sing
Y
168
N
sing
N
169
N
sing
Y
170
N
sing
Y
171
N
doub
Y
172
N
sing
Y
173
N
doub
Y
174
N
sing
Y
175
N
sing
N
176
N
sing
N
177
N
doub
Y
178
N
sing
Y
179
N
doub
N
180
N
sing
Y
181
N
sing
N
182
N
sing
Y
183
N
doub
Y
184
N
sing
Y
185
N
sing
Y
186
N
sing
Y
187
N
doub
N
188
N
sing
N
189
N
sing
Y
190
N
doub
Y
191
N
sing
Y
192
N
sing
N
193
N
sing
Y
194
N
doub
N
195
N
sing
Y
196
N
sing
N
197
N
sing
Y
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
doub
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
doub
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
sing
Y
262
N
doub
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
Y
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
doub
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
Y
378
N
doub
Y
379
N
sing
Y
380
N
sing
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
Y
447
N
doub
Y
448
N
sing
Y
449
N
sing
N
450
N
sing
Y
451
N
doub
N
452
N
sing
Y
453
N
doub
N
454
N
sing
Y
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
doub
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
NE
Febs Lett.
FEBLAL
0165
0014-5793
580
6423
6427
10.1016/j.febslet.2006.10.051
17097086
Damage detection by the UvrABC pathway: crystal structure of UvrB bound to fluorescein-adducted DNA
2006
10.2210/pdb2nmv/pdb
pdb_00002nmv
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Bent cylindrical mirror
CCD
2005-12-15
ADSC QUANTUM 4
Si 111 channel
SINGLE WAVELENGTH
M
x-ray
1
0.980
1.0
ID23-2
ESRF
0.980
SYNCHROTRON
ESRF BEAMLINE ID23-2
1476.007
5'-D(P*TP*TP*TP*TP*T)-3'
1
syn
polymer
76440.133
UvrABC system protein B
3.1.-.-
1
man
polymer
4506.226
UvrABC system protein B
3.1.-.-
residues 622-659
1
man
polymer
73.094
N-METHYLACETAMIDE
1
syn
non-polymer
332.306
2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID
1
syn
non-polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
Protein uvrB, Excinuclease ABC subunit B, Protein dinA
Protein uvrB, Excinuclease ABC subunit B, Protein dinA
no
no
(DT)(DT)(DT)(DT)(DT)
TTTTT
D
polydeoxyribonucleotide
no
no
MKDRFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEF
FPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPEEYREMVVS
LRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCVRVEFFGDEIERIREVDALTGEILGDRDH
VAIFPASHFVTRAEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGS
TPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYE
IEHTDEMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITKSM
EIAINETKRRREQQERFNEEHGITPKTINKEIRDVIRATVAAEDKAEYKTKAAPKLSKMTKKERQKVVEQMEHEMKEAAK
ALDFERAAELRDLLLELKAEG
MKDRFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEF
FPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPEEYREMVVS
LRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCVRVEFFGDEIERIREVDALTGEILGDRDH
VAIFPASHFVTRAEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGS
TPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYE
IEHTDEMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITKSM
EIAINETKRRREQQERFNEEHGITPKTINKEIRDVIRATVAAEDKAEYKTKAAPKLSKMTKKERQKVVEQMEHEMKEAAK
ALDFERAAELRDLLLELKAEG
A
polypeptide(L)
no
no
KERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKA
KERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKA
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Bacillus
Escherichia
sample
uvrB
1423
Bacillus subtilis
562
Escherichia coli
BL21DE3 pLysS
Plasmid
pET8c
Bacillus
Escherichia
sample
uvrB
1423
Bacillus subtilis
562
Escherichia coli
BL21DE3 pLysS
Plasmid
pET8c
1
2.11
41.74
8.5
18-20% PEG 20000, 0.1M pH 8.5 Tris-Hcl, microbatch, temperature 289K
289
PEG 20000
1
Tris-Hcl
1
PEG 20000
2
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2007-01-16
1
1
2008-05-01
1
2
2011-07-13
1
3
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
The same protein complexed with fluorescein adducted pentathymine
RCSB
Y
PDBJ
2006-10-23
REL
NML
N-METHYLACETAMIDE
FLU
2-(6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)-BENZOIC ACID
ADP
ADENOSINE-5'-DIPHOSPHATE
2D7D
PDB ENTRY 2D7D
PDB
experimental model
TFL
3
4
NML
NML
103
D
FLU
600
5
FLU
FLU
600
D
ADP
500
6
ADP
ADP
662
A
T
1
n
1
DT
1
D
T
2
n
2
DT
2
D
TFL
3
n
3
DT
3
D
T
4
n
4
DT
4
D
T
5
n
5
DT
5
D
n
1
1
A
n
2
2
A
ASP
3
n
3
ASP
3
A
ARG
4
n
4
ARG
4
A
PHE
5
n
5
PHE
5
A
GLU
6
n
6
GLU
6
A
LEU
7
n
7
LEU
7
A
VAL
8
n
8
VAL
8
A
n
9
9
A
LYS
10
n
10
LYS
10
A
TYR
11
n
11
TYR
11
A
GLN
12
n
12
GLN
12
A
PRO
13
n
13
PRO
13
A
GLN
14
n
14
GLN
14
A
GLY
15
n
15
GLY
15
A
ASP
16
n
16
ASP
16
A
GLN
17
n
17
GLN
17
A
PRO
18
n
18
PRO
18
A
LYS
19
n
19
LYS
19
A
ALA
20
n
20
ALA
20
A
ILE
21
n
21
ILE
21
A
GLU
22
n
22
GLU
22
A
LYS
23
n
23
LYS
23
A
LEU
24
n
24
LEU
24
A
VAL
25
n
25
VAL
25
A
LYS
26
n
26
LYS
26
A
GLY
27
n
27
GLY
27
A
ILE
28
n
28
ILE
28
A
GLN
29
n
29
GLN
29
A
GLU
30
n
30
GLU
30
A
GLY
31
n
31
GLY
31
A
LYS
32
n
32
LYS
32
A
LYS
33
n
33
LYS
33
A
HIS
34
n
34
HIS
34
A
GLN
35
n
35
GLN
35
A
THR
36
n
36
THR
36
A
LEU
37
n
37
LEU
37
A
LEU
38
n
38
LEU
38
A
GLY
39
n
39
GLY
39
A
ALA
40
n
40
ALA
40
A
THR
41
n
41
THR
41
A
GLY
42
n
42
GLY
42
A
THR
43
n
43
THR
43
A
GLY
44
n
44
GLY
44
A
LYS
45
n
45
LYS
45
A
THR
46
n
46
THR
46
A
PHE
47
n
47
PHE
47
A
THR
48
n
48
THR
48
A
VAL
49
n
49
VAL
49
A
SER
50
n
50
SER
50
A
ASN
51
n
51
ASN
51
A
LEU
52
n
52
LEU
52
A
ILE
53
n
53
ILE
53
A
LYS
54
n
54
LYS
54
A
GLU
55
n
55
GLU
55
A
VAL
56
n
56
VAL
56
A
ASN
57
n
57
ASN
57
A
LYS
58
n
58
LYS
58
A
PRO
59
n
59
PRO
59
A
THR
60
n
60
THR
60
A
LEU
61
n
61
LEU
61
A
VAL
62
n
62
VAL
62
A
ILE
63
n
63
ILE
63
A
ALA
64
n
64
ALA
64
A
HIS
65
n
65
HIS
65
A
ASN
66
n
66
ASN
66
A
LYS
67
n
67
LYS
67
A
THR
68
n
68
THR
68
A
LEU
69
n
69
LEU
69
A
ALA
70
n
70
ALA
70
A
GLY
71
n
71
GLY
71
A
GLN
72
n
72
GLN
72
A
LEU
73
n
73
LEU
73
A
TYR
74
n
74
TYR
74
A
SER
75
n
75
SER
75
A
GLU
76
n
76
GLU
76
A
PHE
77
n
77
PHE
77
A
LYS
78
n
78
LYS
78
A
GLU
79
n
79
GLU
79
A
PHE
80
n
80
PHE
80
A
PHE
81
n
81
PHE
81
A
PRO
82
n
82
PRO
82
A
ASN
83
n
83
ASN
83
A
ASN
84
n
84
ASN
84
A
ALA
85
n
85
ALA
85
A
VAL
86
n
86
VAL
86
A
GLU
87
n
87
GLU
87
A
TYR
88
n
88
TYR
88
A
PHE
89
n
89
PHE
89
A
VAL
90
n
90
VAL
90
A
SER
91
n
91
SER
91
A
TYR
92
n
92
TYR
92
A
TYR
93
n
93
TYR
93
A
ASP
94
n
94
ASP
94
A
TYR
95
n
95
TYR
95
A
TYR
96
n
96
TYR
96
A
GLN
97
n
97
GLN
97
A
PRO
98
n
98
PRO
98
A
GLU
99
n
99
GLU
99
A
ALA
100
n
100
ALA
100
A
TYR
101
n
101
TYR
101
A
VAL
102
n
102
VAL
102
A
PRO
103
n
103
PRO
103
A
GLN
104
n
104
GLN
104
A
THR
105
n
105
THR
105
A
ASP
106
n
106
ASP
106
A
THR
107
n
107
THR
107
A
PHE
108
n
108
PHE
108
A
ILE
109
n
109
ILE
109
A
GLU
110
n
110
GLU
110
A
LYS
111
n
111
LYS
111
A
ASP
112
n
112
ASP
112
A
ALA
113
n
113
ALA
113
A
SER
114
n
114
SER
114
A
ILE
115
n
115
ILE
115
A
ASN
116
n
116
ASN
116
A
ASP
117
n
117
ASP
117
A
GLU
118
n
118
GLU
118
A
ILE
119
n
119
ILE
119
A
ASP
120
n
120
ASP
120
A
LYS
121
n
121
LYS
121
A
LEU
122
n
122
LEU
122
A
ARG
123
n
123
ARG
123
A
HIS
124
n
124
HIS
124
A
SER
125
n
125
SER
125
A
ALA
126
n
126
ALA
126
A
THR
127
n
127
THR
127
A
SER
128
n
128
SER
128
A
ALA
129
n
129
ALA
129
A
LEU
130
n
130
LEU
130
A
PHE
131
n
131
PHE
131
A
GLU
132
n
132
GLU
132
A
ARG
133
n
133
ARG
133
A
ARG
134
n
134
ARG
134
A
ASP
135
n
135
ASP
135
A
VAL
136
n
136
VAL
136
A
ILE
137
n
137
ILE
137
A
ILE
138
n
138
ILE
138
A
ILE
139
n
139
ILE
139
A
ALA
140
n
140
ALA
140
A
SER
141
n
141
SER
141
A
VAL
142
n
142
VAL
142
A
SER
143
n
143
SER
143
A
CYS
144
n
144
CYS
144
A
ILE
145
n
145
ILE
145
A
TYR
146
n
146
TYR
146
A
GLY
147
n
147
GLY
147
A
LEU
148
n
148
LEU
148
A
GLY
149
n
149
GLY
149
A
SER
150
n
150
SER
150
A
PRO
151
n
151
PRO
151
A
GLU
152
n
152
GLU
152
A
GLU
153
n
153
GLU
153
A
TYR
154
n
154
TYR
154
A
ARG
155
n
155
ARG
155
A
GLU
156
n
156
GLU
156
A
MET
157
n
157
MET
157
A
VAL
158
n
158
VAL
158
A
VAL
159
n
159
VAL
159
A
SER
160
n
160
SER
160
A
LEU
161
n
161
LEU
161
A
ARG
162
n
162
ARG
162
A
THR
163
n
163
THR
163
A
GLU
164
n
164
GLU
164
A
MET
165
n
165
MET
165
A
GLU
166
n
166
GLU
166
A
ILE
167
n
167
ILE
167
A
GLU
168
n
168
GLU
168
A
ARG
169
n
169
ARG
169
A
ASN
170
n
170
ASN
170
A
GLU
171
n
171
GLU
171
A
LEU
172
n
172
LEU
172
A
LEU
173
n
173
LEU
173
A
ARG
174
n
174
ARG
174
A
LYS
175
n
175
LYS
175
A
LEU
176
n
176
LEU
176
A
VAL
177
n
177
VAL
177
A
ASP
178
n
178
ASP
178
A
ILE
179
n
179
ILE
179
A
GLN
180
n
180
GLN
180
A
TYR
181
n
181
TYR
181
A
ALA
182
n
182
ALA
182
A
ARG
183
n
183
ARG
183
A
ASN
184
n
184
ASN
184
A
ASP
185
n
185
ASP
185
A
ILE
186
n
186
ILE
186
A
ASP
187
n
187
ASP
187
A
PHE
188
n
188
PHE
188
A
GLN
189
n
189
GLN
189
A
ARG
190
n
190
ARG
190
A
GLY
191
n
191
GLY
191
A
THR
192
n
192
THR
192
A
PHE
193
n
193
PHE
193
A
ARG
194
n
194
ARG
194
A
VAL
195
n
195
VAL
195
A
ARG
196
n
196
ARG
196
A
GLY
197
n
197
GLY
197
A
ASP
198
n
198
ASP
198
A
VAL
199
n
199
VAL
199
A
VAL
200
n
200
VAL
200
A
GLU
201
n
201
GLU
201
A
ILE
202
n
202
ILE
202
A
PHE
203
n
203
PHE
203
A
PRO
204
n
204
PRO
204
A
ALA
205
n
205
ALA
205
A
SER
206
n
206
SER
206
A
ARG
207
n
207
ARG
207
A
ASP
208
n
208
ASP
208
A
GLU
209
n
209
GLU
209
A
HIS
210
n
210
HIS
210
A
CYS
211
n
211
CYS
211
A
VAL
212
n
212
VAL
212
A
ARG
213
n
213
ARG
213
A
VAL
214
n
214
VAL
214
A
GLU
215
n
215
GLU
215
A
PHE
216
n
216
PHE
216
A
PHE
217
n
217
PHE
217
A
GLY
218
n
218
GLY
218
A
ASP
219
n
219
ASP
219
A
GLU
220
n
220
GLU
220
A
ILE
221
n
221
ILE
221
A
GLU
222
n
222
GLU
222
A
ARG
223
n
223
ARG
223
A
ILE
224
n
224
ILE
224
A
ARG
225
n
225
ARG
225
A
GLU
226
n
226
GLU
226
A
VAL
227
n
227
VAL
227
A
ASP
228
n
228
ASP
228
A
ALA
229
n
229
ALA
229
A
LEU
230
n
230
LEU
230
A
THR
231
n
231
THR
231
A
GLY
232
n
232
GLY
232
A
GLU
233
n
233
GLU
233
A
ILE
234
n
234
ILE
234
A
LEU
235
n
235
LEU
235
A
GLY
236
n
236
GLY
236
A
ASP
237
n
237
ASP
237
A
ARG
238
n
238
ARG
238
A
ASP
239
n
239
ASP
239
A
HIS
240
n
240
HIS
240
A
VAL
241
n
241
VAL
241
A
ALA
242
n
242
ALA
242
A
ILE
243
n
243
ILE
243
A
PHE
244
n
244
PHE
244
A
PRO
245
n
245
PRO
245
A
ALA
246
n
246
ALA
246
A
SER
247
n
247
SER
247
A
HIS
248
n
248
HIS
248
A
PHE
249
n
249
PHE
249
A
VAL
250
n
250
VAL
250
A
THR
251
n
251
THR
251
A
ARG
252
n
252
ARG
252
A
ALA
253
n
253
ALA
253
A
GLU
254
n
254
GLU
254
A
LYS
255
n
255
LYS
255
A
MET
256
n
256
MET
256
A
GLU
257
n
257
GLU
257
A
LYS
258
n
258
LYS
258
A
ALA
259
n
259
ALA
259
A
ILE
260
n
260
ILE
260
A
GLN
261
n
261
GLN
261
A
ASN
262
n
262
ASN
262
A
ILE
263
n
263
ILE
263
A
GLU
264
n
264
GLU
264
A
LYS
265
n
265
LYS
265
A
GLU
266
n
266
GLU
266
A
LEU
267
n
267
LEU
267
A
GLU
268
n
268
GLU
268
A
GLU
269
n
269
GLU
269
A
GLN
270
n
270
GLN
270
A
LEU
271
n
271
LEU
271
A
LYS
272
n
272
LYS
272
A
VAL
273
n
273
VAL
273
A
MET
274
n
274
MET
274
A
HIS
275
n
275
HIS
275
A
GLU
276
n
276
GLU
276
A
ASN
277
n
277
ASN
277
A
GLY
278
n
278
GLY
278
A
LYS
279
n
279
LYS
279
A
LEU
280
n
280
LEU
280
A
LEU
281
n
281
LEU
281
A
GLU
282
n
282
GLU
282
A
ALA
283
n
283
ALA
283
A
GLN
284
n
284
GLN
284
A
ARG
285
n
285
ARG
285
A
LEU
286
n
286
LEU
286
A
GLU
287
n
287
GLU
287
A
GLN
288
n
288
GLN
288
A
ARG
289
n
289
ARG
289
A
THR
290
n
290
THR
290
A
ARG
291
n
291
ARG
291
A
TYR
292
n
292
TYR
292
A
ASP
293
n
293
ASP
293
A
LEU
294
n
294
LEU
294
A
GLU
295
n
295
GLU
295
A
MET
296
n
296
MET
296
A
MET
297
n
297
MET
297
A
ARG
298
n
298
ARG
298
A
GLU
299
n
299
GLU
299
A
MET
300
n
300
MET
300
A
GLY
301
n
301
GLY
301
A
PHE
302
n
302
PHE
302
A
CYS
303
n
303
CYS
303
A
SER
304
n
304
SER
304
A
GLY
305
n
305
GLY
305
A
ILE
306
n
306
ILE
306
A
GLU
307
n
307
GLU
307
A
ASN
308
n
308
ASN
308
A
TYR
309
n
309
TYR
309
A
SER
310
n
310
SER
310
A
ARG
311
n
311
ARG
311
A
HIS
312
n
312
HIS
312
A
LEU
313
n
313
LEU
313
A
THR
314
n
314
THR
314
A
LEU
315
n
315
LEU
315
A
ARG
316
n
316
ARG
316
A
PRO
317
n
317
PRO
317
A
PRO
318
n
318
PRO
318
A
GLY
319
n
319
GLY
319
A
SER
320
n
320
SER
320
A
THR
321
n
321
THR
321
A
PRO
322
n
322
PRO
322
A
TYR
323
n
323
TYR
323
A
THR
324
n
324
THR
324
A
LEU
325
n
325
LEU
325
A
LEU
326
n
326
LEU
326
A
ASP
327
n
327
ASP
327
A
TYR
328
n
328
TYR
328
A
PHE
329
n
329
PHE
329
A
PRO
330
n
330
PRO
330
A
ASP
331
n
331
ASP
331
A
ASP
332
n
332
ASP
332
A
PHE
333
n
333
PHE
333
A
MET
334
n
334
MET
334
A
ILE
335
n
335
ILE
335
A
VAL
336
n
336
VAL
336
A
VAL
337
n
337
VAL
337
A
ASP
338
n
338
ASP
338
A
GLU
339
n
339
GLU
339
A
SER
340
n
340
SER
340
A
HIS
341
n
341
HIS
341
A
VAL
342
n
342
VAL
342
A
THR
343
n
343
THR
343
A
ILE
344
n
344
ILE
344
A
PRO
345
n
345
PRO
345
A
GLN
346
n
346
GLN
346
A
VAL
347
n
347
VAL
347
A
ARG
348
n
348
ARG
348
A
GLY
349
n
349
GLY
349
A
MET
350
n
350
MET
350
A
PHE
351
n
351
PHE
351
A
ASN
352
n
352
ASN
352
A
GLY
353
n
353
GLY
353
A
ASP
354
n
354
ASP
354
A
GLN
355
n
355
GLN
355
A
ALA
356
n
356
ALA
356
A
ARG
357
n
357
ARG
357
A
LYS
358
n
358
LYS
358
A
GLN
359
n
359
GLN
359
A
VAL
360
n
360
VAL
360
A
LEU
361
n
361
LEU
361
A
VAL
362
n
362
VAL
362
A
ASP
363
n
363
ASP
363
A
HIS
364
n
364
HIS
364
A
GLY
365
n
365
GLY
365
A
PHE
366
n
366
PHE
366
A
ARG
367
n
367
ARG
367
A
LEU
368
n
368
LEU
368
A
PRO
369
n
369
PRO
369
A
SER
370
n
370
SER
370
A
ALA
371
n
371
ALA
371
A
LEU
372
n
372
LEU
372
A
ASP
373
n
373
ASP
373
A
ASN
374
n
374
ASN
374
A
ARG
375
n
375
ARG
375
A
PRO
376
n
376
PRO
376
A
LEU
377
n
377
LEU
377
A
ARG
378
n
378
ARG
378
A
PHE
379
n
379
PHE
379
A
GLU
380
n
380
GLU
380
A
GLU
381
n
381
GLU
381
A
PHE
382
n
382
PHE
382
A
GLU
383
n
383
GLU
383
A
LYS
384
n
384
LYS
384
A
HIS
385
n
385
HIS
385
A
MET
386
n
386
MET
386
A
HIS
387
n
387
HIS
387
A
ASN
388
n
388
ASN
388
A
ILE
389
n
389
ILE
389
A
VAL
390
n
390
VAL
390
A
TYR
391
n
391
TYR
391
A
VAL
392
n
392
VAL
392
A
SER
393
n
393
SER
393
A
ALA
394
n
394
ALA
394
A
THR
395
n
395
THR
395
A
PRO
396
n
396
PRO
396
A
GLY
397
n
397
GLY
397
A
PRO
398
n
398
PRO
398
A
TYR
399
n
399
TYR
399
A
GLU
400
n
400
GLU
400
A
ILE
401
n
401
ILE
401
A
GLU
402
n
402
GLU
402
A
HIS
403
n
403
HIS
403
A
THR
404
n
404
THR
404
A
ASP
405
n
405
ASP
405
A
GLU
406
n
406
GLU
406
A
MET
407
n
407
MET
407
A
VAL
408
n
408
VAL
408
A
GLU
409
n
409
GLU
409
A
GLN
410
n
410
GLN
410
A
ILE
411
n
411
ILE
411
A
ILE
412
n
412
ILE
412
A
ARG
413
n
413
ARG
413
A
PRO
414
n
414
PRO
414
A
THR
415
n
415
THR
415
A
GLY
416
n
416
GLY
416
A
LEU
417
n
417
LEU
417
A
LEU
418
n
418
LEU
418
A
ASP
419
n
419
ASP
419
A
PRO
420
n
420
PRO
420
A
LEU
421
n
421
LEU
421
A
ILE
422
n
422
ILE
422
A
ASP
423
n
423
ASP
423
A
VAL
424
n
424
VAL
424
A
ARG
425
n
425
ARG
425
A
PRO
426
n
426
PRO
426
A
ILE
427
n
427
ILE
427
A
GLU
428
n
428
GLU
428
A
GLY
429
n
429
GLY
429
A
GLN
430
n
430
GLN
430
A
ILE
431
n
431
ILE
431
A
ASP
432
n
432
ASP
432
A
ASP
433
n
433
ASP
433
A
LEU
434
n
434
LEU
434
A
ILE
435
n
435
ILE
435
A
GLY
436
n
436
GLY
436
A
GLU
437
n
437
GLU
437
A
ILE
438
n
438
ILE
438
A
GLN
439
n
439
GLN
439
A
ALA
440
n
440
ALA
440
A
ARG
441
n
441
ARG
441
A
ILE
442
n
442
ILE
442
A
GLU
443
n
443
GLU
443
A
ARG
444
n
444
ARG
444
A
ASN
445
n
445
ASN
445
A
GLU
446
n
446
GLU
446
A
ARG
447
n
447
ARG
447
A
VAL
448
n
448
VAL
448
A
LEU
449
n
449
LEU
449
A
VAL
450
n
450
VAL
450
A
THR
451
n
451
THR
451
A
THR
452
n
452
THR
452
A
LEU
453
n
453
LEU
453
A
THR
454
n
454
THR
454
A
LYS
455
n
455
LYS
455
A
LYS
456
n
456
LYS
456
A
MET
457
n
457
MET
457
A
SER
458
n
458
SER
458
A
GLU
459
n
459
GLU
459
A
ASP
460
n
460
ASP
460
A
LEU
461
n
461
LEU
461
A
THR
462
n
462
THR
462
A
ASP
463
n
463
ASP
463
A
TYR
464
n
464
TYR
464
A
LEU
465
n
465
LEU
465
A
LYS
466
n
466
LYS
466
A
GLU
467
n
467
GLU
467
A
ILE
468
n
468
ILE
468
A
GLY
469
n
469
GLY
469
A
ILE
470
n
470
ILE
470
A
LYS
471
n
471
LYS
471
A
VAL
472
n
472
VAL
472
A
ASN
473
n
473
ASN
473
A
TYR
474
n
474
TYR
474
A
LEU
475
n
475
LEU
475
A
HIS
476
n
476
HIS
476
A
SER
477
n
477
SER
477
A
GLU
478
n
478
GLU
478
A
ILE
479
n
479
ILE
479
A
LYS
480
n
480
LYS
480
A
THR
481
n
481
THR
481
A
LEU
482
n
482
LEU
482
A
GLU
483
n
483
GLU
483
A
ARG
484
n
484
ARG
484
A
ILE
485
n
485
ILE
485
A
GLU
486
n
486
GLU
486
A
ILE
487
n
487
ILE
487
A
ILE
488
n
488
ILE
488
A
ARG
489
n
489
ARG
489
A
ASP
490
n
490
ASP
490
A
LEU
491
n
491
LEU
491
A
ARG
492
n
492
ARG
492
A
LEU
493
n
493
LEU
493
A
GLY
494
n
494
GLY
494
A
LYS
495
n
495
LYS
495
A
TYR
496
n
496
TYR
496
A
ASP
497
n
497
ASP
497
A
VAL
498
n
498
VAL
498
A
LEU
499
n
499
LEU
499
A
VAL
500
n
500
VAL
500
A
GLY
501
n
501
GLY
501
A
ILE
502
n
502
ILE
502
A
ASN
503
n
503
ASN
503
A
LEU
504
n
504
LEU
504
A
LEU
505
n
505
LEU
505
A
ARG
506
n
506
ARG
506
A
GLU
507
n
507
GLU
507
A
GLY
508
n
508
GLY
508
A
LEU
509
n
509
LEU
509
A
ASP
510
n
510
ASP
510
A
ILE
511
n
511
ILE
511
A
PRO
512
n
512
PRO
512
A
GLU
513
n
513
GLU
513
A
VAL
514
n
514
VAL
514
A
SER
515
n
515
SER
515
A
LEU
516
n
516
LEU
516
A
VAL
517
n
517
VAL
517
A
ALA
518
n
518
ALA
518
A
ILE
519
n
519
ILE
519
A
LEU
520
n
520
LEU
520
A
ASP
521
n
521
ASP
521
A
ALA
522
n
522
ALA
522
A
ASP
523
n
523
ASP
523
A
LYS
524
n
524
LYS
524
A
GLU
525
n
525
GLU
525
A
GLY
526
n
526
GLY
526
A
PHE
527
n
527
PHE
527
A
LEU
528
n
528
LEU
528
A
ARG
529
n
529
ARG
529
A
SER
530
n
530
SER
530
A
GLU
531
n
531
GLU
531
A
ARG
532
n
532
ARG
532
A
SER
533
n
533
SER
533
A
LEU
534
n
534
LEU
534
A
ILE
535
n
535
ILE
535
A
GLN
536
n
536
GLN
536
A
THR
537
n
537
THR
537
A
ILE
538
n
538
ILE
538
A
GLY
539
n
539
GLY
539
A
ARG
540
n
540
ARG
540
A
ALA
541
n
541
ALA
541
A
ALA
542
n
542
ALA
542
A
ARG
543
n
543
ARG
543
A
ASN
544
n
544
ASN
544
A
ALA
545
n
545
ALA
545
A
GLU
546
n
546
GLU
546
A
GLY
547
n
547
GLY
547
A
ARG
548
n
548
ARG
548
A
VAL
549
n
549
VAL
549
A
ILE
550
n
550
ILE
550
A
MET
551
n
551
MET
551
A
TYR
552
n
552
TYR
552
A
ALA
553
n
553
ALA
553
A
ASP
554
n
554
ASP
554
A
LYS
555
n
555
LYS
555
A
ILE
556
n
556
ILE
556
A
THR
557
n
557
THR
557
A
LYS
558
n
558
LYS
558
A
SER
559
n
559
SER
559
A
MET
560
n
560
MET
560
A
GLU
561
n
561
GLU
561
A
ILE
562
n
562
ILE
562
A
ALA
563
n
563
ALA
563
A
ILE
564
n
564
ILE
564
A
ASN
565
n
565
ASN
565
A
GLU
566
n
566
GLU
566
A
THR
567
n
567
THR
567
A
LYS
568
n
568
LYS
568
A
ARG
569
n
569
ARG
569
A
ARG
570
n
570
ARG
570
A
ARG
571
n
571
ARG
571
A
GLU
572
n
572
GLU
572
A
GLN
573
n
573
GLN
573
A
GLN
574
n
574
GLN
574
A
GLU
575
n
575
GLU
575
A
ARG
576
n
576
ARG
576
A
PHE
577
n
577
PHE
577
A
ASN
578
n
578
ASN
578
A
GLU
579
n
579
GLU
579
A
GLU
580
n
580
GLU
580
A
HIS
581
n
581
HIS
581
A
GLY
582
n
582
GLY
582
A
ILE
583
n
583
ILE
583
A
THR
584
n
584
THR
584
A
PRO
585
n
585
PRO
585
A
LYS
586
n
586
LYS
586
A
THR
587
n
587
THR
587
A
ILE
588
n
588
ILE
588
A
ASN
589
n
589
ASN
589
A
n
590
590
A
n
591
591
A
n
592
592
A
n
593
593
A
n
594
594
A
n
595
595
A
n
596
596
A
n
597
597
A
n
598
598
A
n
599
599
A
n
600
600
A
n
601
601
A
n
602
602
A
n
603
603
A
n
604
604
A
n
605
605
A
n
606
606
A
n
607
607
A
n
608
608
A
n
609
609
A
n
610
610
A
n
611
611
A
n
612
612
A
n
613
613
A
n
614
614
A
n
615
615
A
n
616
616
A
n
617
617
A
n
618
618
A
n
619
619
A
n
620
620
A
LYS
621
n
621
LYS
621
A
LYS
622
n
622
LYS
622
A
GLU
623
n
623
GLU
623
A
ARG
624
n
624
ARG
624
A
GLN
625
n
625
GLN
625
A
LYS
626
n
626
LYS
626
A
VAL
627
n
627
VAL
627
A
VAL
628
n
628
VAL
628
A
GLU
629
n
629
GLU
629
A
GLN
630
n
630
GLN
630
A
MET
631
n
631
MET
631
A
GLU
632
n
632
GLU
632
A
HIS
633
n
633
HIS
633
A
GLU
634
n
634
GLU
634
A
MET
635
n
635
MET
635
A
LYS
636
n
636
LYS
636
A
GLU
637
n
637
GLU
637
A
ALA
638
n
638
ALA
638
A
ALA
639
n
639
ALA
639
A
LYS
640
n
640
LYS
640
A
ALA
641
n
641
ALA
641
A
LEU
642
n
642
LEU
642
A
ASP
643
n
643
ASP
643
A
PHE
644
n
644
PHE
644
A
GLU
645
n
645
GLU
645
A
ARG
646
n
646
ARG
646
A
ALA
647
n
647
ALA
647
A
ALA
648
n
648
ALA
648
A
GLU
649
n
649
GLU
649
A
LEU
650
n
650
LEU
650
A
ARG
651
n
651
ARG
651
A
ASP
652
n
652
ASP
652
A
LEU
653
n
653
LEU
653
A
LEU
654
n
654
LEU
654
A
n
655
655
A
n
656
656
A
n
657
657
A
n
658
658
A
n
659
659
A
n
660
660
A
n
661
661
A
LYS
622
n
1
LYS
622
B
GLU
623
n
2
GLU
623
B
ARG
624
n
3
ARG
624
B
GLN
625
n
4
GLN
625
B
LYS
626
n
5
LYS
626
B
VAL
627
n
6
VAL
627
B
VAL
628
n
7
VAL
628
B
GLU
629
n
8
GLU
629
B
GLN
630
n
9
GLN
630
B
MET
631
n
10
MET
631
B
GLU
632
n
11
GLU
632
B
HIS
633
n
12
HIS
633
B
GLU
634
n
13
GLU
634
B
MET
635
n
14
MET
635
B
LYS
636
n
15
LYS
636
B
GLU
637
n
16
GLU
637
B
ALA
638
n
17
ALA
638
B
ALA
639
n
18
ALA
639
B
LYS
640
n
19
LYS
640
B
ALA
641
n
20
ALA
641
B
LEU
642
n
21
LEU
642
B
ASP
643
n
22
ASP
643
B
PHE
644
n
23
PHE
644
B
GLU
645
n
24
GLU
645
B
ARG
646
n
25
ARG
646
B
ALA
647
n
26
ALA
647
B
ALA
648
n
27
ALA
648
B
GLU
649
n
28
GLU
649
B
LEU
650
n
29
LEU
650
B
ARG
651
n
30
ARG
651
B
ASP
652
n
31
ASP
652
B
LEU
653
n
32
LEU
653
B
LEU
654
n
33
LEU
654
B
LEU
655
n
34
LEU
655
B
GLU
656
n
35
GLU
656
B
LEU
657
n
36
LEU
657
B
LYS
658
n
37
LYS
658
B
ALA
659
n
38
ALA
659
B
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
89
B
N
PHE
89
A
O
ILE
139
B
O
ILE
139
A
O
ILE
138
B
O
ILE
138
A
N
VAL
62
B
N
VAL
62
A
N
LEU
61
B
N
LEU
61
A
O
VAL
336
B
O
VAL
336
A
N
ILE
335
B
N
ILE
335
A
O
VAL
390
B
O
VAL
390
A
O
TYR
391
B
O
TYR
391
A
N
LEU
37
B
N
LEU
37
A
N
LEU
38
B
N
LEU
38
A
O
VAL
408
B
O
VAL
408
A
N
ASP
94
B
N
ASP
94
A
O
SER
114
B
O
SER
114
A
N
ALA
100
B
N
ALA
100
A
O
ILE
109
B
O
ILE
109
A
N
LEU
161
B
N
LEU
161
A
O
VAL
241
B
O
VAL
241
A
N
ALA
182
B
N
ALA
182
A
O
PHE
193
B
O
PHE
193
A
N
ARG
194
B
N
ARG
194
A
O
GLU
201
B
O
GLU
201
A
N
VAL
200
B
N
VAL
200
A
O
VAL
214
B
O
VAL
214
A
N
GLU
215
B
N
GLU
215
A
O
GLU
222
B
O
GLU
222
A
N
GLU
226
B
N
GLU
226
A
O
LEU
235
B
O
LEU
235
A
N
ASP
423
B
N
ASP
423
A
O
MET
551
B
O
MET
551
A
O
ILE
550
B
O
ILE
550
A
N
ILE
519
B
N
ILE
519
A
O
ALA
518
B
O
ALA
518
A
N
LEU
449
B
N
LEU
449
A
N
VAL
450
B
N
VAL
450
A
O
LEU
499
B
O
LEU
499
A
O
VAL
500
B
O
VAL
500
A
N
LEU
475
B
N
LEU
475
1
D
C5'
DT
5
A
C5'
DT
5
1
Y
1
D
C4'
DT
5
A
C4'
DT
5
1
Y
1
D
O4'
DT
5
A
O4'
DT
5
1
Y
1
D
C3'
DT
5
A
C3'
DT
5
1
Y
1
D
O3'
DT
5
A
O3'
DT
5
1
Y
1
D
C2'
DT
5
A
C2'
DT
5
1
Y
1
D
C1'
DT
5
A
C1'
DT
5
1
Y
1
D
N1
DT
5
A
N1
DT
5
1
Y
1
D
C2
DT
5
A
C2
DT
5
1
Y
1
D
O2
DT
5
A
O2
DT
5
1
Y
1
D
N3
DT
5
A
N3
DT
5
1
Y
1
D
C4
DT
5
A
C4
DT
5
1
Y
1
D
O4
DT
5
A
O4
DT
5
1
Y
1
D
C5
DT
5
A
C5
DT
5
1
Y
1
D
C7
DT
5
A
C7
DT
5
1
Y
1
D
C6
DT
5
A
C6
DT
5
1
Y
1
A
CG
ARG
4
B
CG
ARG
4
1
Y
1
A
CD
ARG
4
B
CD
ARG
4
1
Y
1
A
NE
ARG
4
B
NE
ARG
4
1
Y
1
A
CZ
ARG
4
B
CZ
ARG
4
1
Y
1
A
NH1
ARG
4
B
NH1
ARG
4
1
Y
1
A
NH2
ARG
4
B
NH2
ARG
4
1
Y
1
A
CG
ASP
94
B
CG
ASP
94
1
Y
1
A
OD1
ASP
94
B
OD1
ASP
94
1
Y
1
A
OD2
ASP
94
B
OD2
ASP
94
1
Y
1
A
CG
TYR
95
B
CG
TYR
95
1
Y
1
A
CD1
TYR
95
B
CD1
TYR
95
1
Y
1
A
CD2
TYR
95
B
CD2
TYR
95
1
Y
1
A
CE1
TYR
95
B
CE1
TYR
95
1
Y
1
A
CE2
TYR
95
B
CE2
TYR
95
1
Y
1
A
CZ
TYR
95
B
CZ
TYR
95
1
Y
1
A
OH
TYR
95
B
OH
TYR
95
1
Y
1
A
CG
GLN
104
B
CG
GLN
104
1
Y
1
A
CD
GLN
104
B
CD
GLN
104
1
Y
1
A
OE1
GLN
104
B
OE1
GLN
104
1
Y
1
A
NE2
GLN
104
B
NE2
GLN
104
1
Y
1
A
CG
LYS
111
B
CG
LYS
111
1
Y
1
A
CD
LYS
111
B
CD
LYS
111
1
Y
1
A
CE
LYS
111
B
CE
LYS
111
1
Y
1
A
NZ
LYS
111
B
NZ
LYS
111
1
Y
1
A
CB
GLU
153
B
CB
GLU
153
1
Y
1
A
CG
GLU
153
B
CG
GLU
153
1
Y
1
A
CD
GLU
153
B
CD
GLU
153
1
Y
1
A
OE1
GLU
153
B
OE1
GLU
153
1
Y
1
A
OE2
GLU
153
B
OE2
GLU
153
1
Y
1
A
CG
ARG
155
B
CG
ARG
155
1
Y
1
A
CD
ARG
155
B
CD
ARG
155
1
Y
1
A
NE
ARG
155
B
NE
ARG
155
1
Y
1
A
CZ
ARG
155
B
CZ
ARG
155
1
Y
1
A
NH1
ARG
155
B
NH1
ARG
155
1
Y
1
A
NH2
ARG
155
B
NH2
ARG
155
1
Y
1
A
CG
MET
157
B
CG
MET
157
1
Y
1
A
SD
MET
157
B
SD
MET
157
1
Y
1
A
CE
MET
157
B
CE
MET
157
1
Y
1
A
CG
GLU
166
B
CG
GLU
166
1
Y
1
A
CD
GLU
166
B
CD
GLU
166
1
Y
1
A
OE1
GLU
166
B
OE1
GLU
166
1
Y
1
A
OE2
GLU
166
B
OE2
GLU
166
1
Y
1
A
CG1
ILE
186
B
CG1
ILE
186
1
Y
1
A
CG2
ILE
186
B
CG2
ILE
186
1
Y
1
A
CD1
ILE
186
B
CD1
ILE
186
1
Y
1
A
CG
LEU
230
B
CG
LEU
230
1
Y
1
A
CD1
LEU
230
B
CD1
LEU
230
1
Y
1
A
CD2
LEU
230
B
CD2
LEU
230
1
Y
1
A
CG
PHE
249
B
CG
PHE
249
1
Y
1
A
CD1
PHE
249
B
CD1
PHE
249
1
Y
1
A
CD2
PHE
249
B
CD2
PHE
249
1
Y
1
A
CE1
PHE
249
B
CE1
PHE
249
1
Y
1
A
CE2
PHE
249
B
CE2
PHE
249
1
Y
1
A
CZ
PHE
249
B
CZ
PHE
249
1
Y
1
A
CG
GLU
254
B
CG
GLU
254
1
Y
1
A
CD
GLU
254
B
CD
GLU
254
1
Y
1
A
OE1
GLU
254
B
OE1
GLU
254
1
Y
1
A
OE2
GLU
254
B
OE2
GLU
254
1
Y
1
A
CG
LYS
255
B
CG
LYS
255
1
Y
1
A
CD
LYS
255
B
CD
LYS
255
1
Y
1
A
CE
LYS
255
B
CE
LYS
255
1
Y
1
A
NZ
LYS
255
B
NZ
LYS
255
1
Y
1
A
CG
GLU
257
B
CG
GLU
257
1
Y
1
A
CD
GLU
257
B
CD
GLU
257
1
Y
1
A
OE1
GLU
257
B
OE1
GLU
257
1
Y
1
A
OE2
GLU
257
B
OE2
GLU
257
1
Y
1
A
CG
GLN
284
B
CG
GLN
284
1
Y
1
A
CD
GLN
284
B
CD
GLN
284
1
Y
1
A
OE1
GLN
284
B
OE1
GLN
284
1
Y
1
A
NE2
GLN
284
B
NE2
GLN
284
1
Y
1
A
CG
GLU
295
B
CG
GLU
295
1
Y
1
A
CD
GLU
295
B
CD
GLU
295
1
Y
1
A
OE1
GLU
295
B
OE1
GLU
295
1
Y
1
A
OE2
GLU
295
B
OE2
GLU
295
1
Y
1
A
CG
GLU
406
B
CG
GLU
406
1
Y
1
A
CD
GLU
406
B
CD
GLU
406
1
Y
1
A
OE1
GLU
406
B
OE1
GLU
406
1
Y
1
A
OE2
GLU
406
B
OE2
GLU
406
1
Y
1
A
CG
LYS
455
B
CG
LYS
455
1
Y
1
A
CD
LYS
455
B
CD
LYS
455
1
Y
1
A
CE
LYS
455
B
CE
LYS
455
1
Y
1
A
NZ
LYS
455
B
NZ
LYS
455
1
Y
1
A
CG
LYS
456
B
CG
LYS
456
1
Y
1
A
CD
LYS
456
B
CD
LYS
456
1
Y
1
A
CE
LYS
456
B
CE
LYS
456
1
Y
1
A
NZ
LYS
456
B
NZ
LYS
456
1
Y
1
A
CG
GLU
467
B
CG
GLU
467
1
Y
1
A
CD
GLU
467
B
CD
GLU
467
1
Y
1
A
OE1
GLU
467
B
OE1
GLU
467
1
Y
1
A
OE2
GLU
467
B
OE2
GLU
467
1
Y
1
A
CG
HIS
476
B
CG
HIS
476
1
Y
1
A
ND1
HIS
476
B
ND1
HIS
476
1
Y
1
A
CD2
HIS
476
B
CD2
HIS
476
1
Y
1
A
CE1
HIS
476
B
CE1
HIS
476
1
Y
1
A
NE2
HIS
476
B
NE2
HIS
476
1
Y
1
A
CG
GLU
478
B
CG
GLU
478
1
Y
1
A
CD
GLU
478
B
CD
GLU
478
1
Y
1
A
OE1
GLU
478
B
OE1
GLU
478
1
Y
1
A
OE2
GLU
478
B
OE2
GLU
478
1
Y
1
A
CG
LYS
480
B
CG
LYS
480
1
Y
1
A
CD
LYS
480
B
CD
LYS
480
1
Y
1
A
CE
LYS
480
B
CE
LYS
480
1
Y
1
A
NZ
LYS
480
B
NZ
LYS
480
1
Y
1
A
CG
ARG
484
B
CG
ARG
484
1
Y
1
A
CD
ARG
484
B
CD
ARG
484
1
Y
1
A
NE
ARG
484
B
NE
ARG
484
1
Y
1
A
CZ
ARG
484
B
CZ
ARG
484
1
Y
1
A
NH1
ARG
484
B
NH1
ARG
484
1
Y
1
A
NH2
ARG
484
B
NH2
ARG
484
1
Y
1
A
CG
ARG
489
B
CG
ARG
489
1
Y
1
A
CD
ARG
489
B
CD
ARG
489
1
Y
1
A
NE
ARG
489
B
NE
ARG
489
1
Y
1
A
CZ
ARG
489
B
CZ
ARG
489
1
Y
1
A
NH1
ARG
489
B
NH1
ARG
489
1
Y
1
A
NH2
ARG
489
B
NH2
ARG
489
1
Y
1
A
CG
ARG
506
B
CG
ARG
506
1
Y
1
A
CD
ARG
506
B
CD
ARG
506
1
Y
1
A
NE
ARG
506
B
NE
ARG
506
1
Y
1
A
CZ
ARG
506
B
CZ
ARG
506
1
Y
1
A
NH1
ARG
506
B
NH1
ARG
506
1
Y
1
A
NH2
ARG
506
B
NH2
ARG
506
1
Y
1
A
CG
LYS
586
B
CG
LYS
586
1
Y
1
A
CD
LYS
586
B
CD
LYS
586
1
Y
1
A
CE
LYS
586
B
CE
LYS
586
1
Y
1
A
NZ
LYS
586
B
NZ
LYS
586
1
Y
1
A
CG
ASN
589
B
CG
ASN
589
1
Y
1
A
OD1
ASN
589
B
OD1
ASN
589
1
Y
1
A
ND2
ASN
589
B
ND2
ASN
589
1
Y
1
A
CG
LYS
621
B
CG
LYS
621
1
Y
1
A
CD
LYS
621
B
CD
LYS
621
1
Y
1
A
CE
LYS
621
B
CE
LYS
621
1
Y
1
A
NZ
LYS
621
B
NZ
LYS
621
1
Y
1
A
CG
LYS
622
B
CG
LYS
622
1
Y
1
A
CD
LYS
622
B
CD
LYS
622
1
Y
1
A
CE
LYS
622
B
CE
LYS
622
1
Y
1
A
NZ
LYS
622
B
NZ
LYS
622
1
Y
1
A
CG
GLU
623
B
CG
GLU
623
1
Y
1
A
CD
GLU
623
B
CD
GLU
623
1
Y
1
A
OE1
GLU
623
B
OE1
GLU
623
1
Y
1
A
OE2
GLU
623
B
OE2
GLU
623
1
Y
1
A
CG
ARG
624
B
CG
ARG
624
1
Y
1
A
CD
ARG
624
B
CD
ARG
624
1
Y
1
A
NE
ARG
624
B
NE
ARG
624
1
Y
1
A
CZ
ARG
624
B
CZ
ARG
624
1
Y
1
A
NH1
ARG
624
B
NH1
ARG
624
1
Y
1
A
NH2
ARG
624
B
NH2
ARG
624
1
Y
1
A
CG
GLN
625
B
CG
GLN
625
1
Y
1
A
CD
GLN
625
B
CD
GLN
625
1
Y
1
A
OE1
GLN
625
B
OE1
GLN
625
1
Y
1
A
NE2
GLN
625
B
NE2
GLN
625
1
Y
1
A
CG
LYS
626
B
CG
LYS
626
1
Y
1
A
CD
LYS
626
B
CD
LYS
626
1
Y
1
A
CE
LYS
626
B
CE
LYS
626
1
Y
1
A
NZ
LYS
626
B
NZ
LYS
626
1
Y
1
A
CG1
VAL
627
B
CG1
VAL
627
1
Y
1
A
CG2
VAL
627
B
CG2
VAL
627
1
Y
1
A
CG
GLU
629
B
CG
GLU
629
1
Y
1
A
CD
GLU
629
B
CD
GLU
629
1
Y
1
A
OE1
GLU
629
B
OE1
GLU
629
1
Y
1
A
OE2
GLU
629
B
OE2
GLU
629
1
Y
1
A
CG
GLN
630
B
CG
GLN
630
1
Y
1
A
CD
GLN
630
B
CD
GLN
630
1
Y
1
A
OE1
GLN
630
B
OE1
GLN
630
1
Y
1
A
NE2
GLN
630
B
NE2
GLN
630
1
Y
1
A
CG
GLU
634
B
CG
GLU
634
1
Y
1
A
CD
GLU
634
B
CD
GLU
634
1
Y
1
A
OE1
GLU
634
B
OE1
GLU
634
1
Y
1
A
OE2
GLU
634
B
OE2
GLU
634
1
Y
1
A
CG
LYS
636
B
CG
LYS
636
1
Y
1
A
CD
LYS
636
B
CD
LYS
636
1
Y
1
A
CE
LYS
636
B
CE
LYS
636
1
Y
1
A
NZ
LYS
636
B
NZ
LYS
636
1
Y
1
B
CG
LYS
622
C
CG
LYS
1
1
Y
1
B
CD
LYS
622
C
CD
LYS
1
1
Y
1
B
CE
LYS
622
C
CE
LYS
1
1
Y
1
B
NZ
LYS
622
C
NZ
LYS
1
1
Y
1
B
CG
GLN
625
C
CG
GLN
4
1
Y
1
B
CD
GLN
625
C
CD
GLN
4
1
Y
1
B
OE1
GLN
625
C
OE1
GLN
4
1
Y
1
B
NE2
GLN
625
C
NE2
GLN
4
1
Y
1
B
CG
LYS
636
C
CG
LYS
15
1
Y
1
B
CD
LYS
636
C
CD
LYS
15
1
Y
1
B
CE
LYS
636
C
CE
LYS
15
1
Y
1
B
NZ
LYS
636
C
NZ
LYS
15
1
Y
1
D
C14
FLU
600
E
C14
FLU
1
1
N
1
D
C15
FLU
600
E
C15
FLU
1
1
N
1
D
C16
FLU
600
E
C16
FLU
1
1
N
1
D
C17
FLU
600
E
C17
FLU
1
1
N
1
D
C18
FLU
600
E
C18
FLU
1
1
N
1
D
C19
FLU
600
E
C19
FLU
1
1
N
1
D
C20
FLU
600
E
C20
FLU
1
1
N
1
D
O4
FLU
600
E
O4
FLU
1
1
N
1
D
O5
FLU
600
E
O5
FLU
1
1
N
1
A
MET
1
B
MET
1
1
Y
1
A
LYS
2
B
LYS
2
1
Y
1
A
SER
9
B
SER
9
1
Y
1
A
LYS
590
B
LYS
590
1
Y
1
A
GLU
591
B
GLU
591
1
Y
1
A
ILE
592
B
ILE
592
1
Y
1
A
ARG
593
B
ARG
593
1
Y
1
A
ASP
594
B
ASP
594
1
Y
1
A
VAL
595
B
VAL
595
1
Y
1
A
ILE
596
B
ILE
596
1
Y
1
A
ARG
597
B
ARG
597
1
Y
1
A
ALA
598
B
ALA
598
1
Y
1
A
THR
599
B
THR
599
1
Y
1
A
VAL
600
B
VAL
600
1
Y
1
A
ALA
601
B
ALA
601
1
Y
1
A
ALA
602
B
ALA
602
1
Y
1
A
GLU
603
B
GLU
603
1
Y
1
A
ASP
604
B
ASP
604
1
Y
1
A
LYS
605
B
LYS
605
1
Y
1
A
ALA
606
B
ALA
606
1
Y
1
A
GLU
607
B
GLU
607
1
Y
1
A
TYR
608
B
TYR
608
1
Y
1
A
LYS
609
B
LYS
609
1
Y
1
A
THR
610
B
THR
610
1
Y
1
A
LYS
611
B
LYS
611
1
Y
1
A
ALA
612
B
ALA
612
1
Y
1
A
ALA
613
B
ALA
613
1
Y
1
A
PRO
614
B
PRO
614
1
Y
1
A
LYS
615
B
LYS
615
1
Y
1
A
LEU
616
B
LEU
616
1
Y
1
A
SER
617
B
SER
617
1
Y
1
A
LYS
618
B
LYS
618
1
Y
1
A
MET
619
B
MET
619
1
Y
1
A
THR
620
B
THR
620
1
Y
1
A
LEU
655
B
LEU
655
1
Y
1
A
GLU
656
B
GLU
656
1
Y
1
A
LEU
657
B
LEU
657
1
Y
1
A
LYS
658
B
LYS
658
1
Y
1
A
ALA
659
B
ALA
659
1
Y
1
A
GLU
660
B
GLU
660
1
Y
1
A
GLY
661
B
GLY
661
1
Y
1
9.52
0.30
108.30
117.82
D
D
D
O4'
C1'
N1
DT
DT
DT
1
1
1
N
1
3.55
0.30
108.30
111.85
D
D
D
O4'
C1'
N1
DT
DT
DT
2
2
2
N
1
-16.40
1.90
104.00
87.60
D
D
D
O3'
P
O5'
DT
DT
DT
2
3
3
Y
1
21.74
1.10
110.50
132.24
D
D
D
O3'
P
OP2
DT
DT
DT
2
3
3
Y
1
3.02
0.30
108.30
111.32
D
D
D
O4'
C1'
N1
DT
DT
DT
3
3
3
N
1
4.69
0.60
114.60
119.29
D
D
D
N1
C2
N3
DT
DT
DT
3
3
3
N
1
-7.00
0.60
127.20
120.20
D
D
D
C2
N3
C4
DT
DT
DT
3
3
3
N
1
5.53
0.60
115.20
120.73
D
D
D
N3
C4
C5
DT
DT
DT
3
3
3
N
1
-3.77
0.60
122.30
118.53
D
D
D
N3
C2
O2
DT
DT
DT
3
3
3
N
1
4.21
0.60
119.00
123.21
D
D
D
C4
C5
C7
DT
DT
DT
3
3
3
N
1
-12.95
1.20
119.70
106.75
D
D
D
C3'
O3'
P
DT
DT
DT
3
3
4
Y
1
-19.43
1.90
104.00
84.57
D
D
D
O3'
P
O5'
DT
DT
DT
3
4
4
Y
1
10.34
1.10
110.50
120.84
D
D
D
O3'
P
OP2
DT
DT
DT
3
4
4
Y
1
5.50
0.90
118.30
123.80
A
A
A
CB
CG
OD2
ASP
ASP
ASP
120
120
120
N
1
9.36
1.50
119.30
128.66
A
A
A
C
N
CA
ARG
PRO
PRO
316
317
317
Y
1
D
D
C6
N1
DT
DT
3
3
-0.045
0.007
1.378
1.333
N
1
D
D
C5
C7
DT
DT
3
3
0.068
0.006
1.496
1.564
N
1
A
PRO
13
-35.92
119.14
1
A
ALA
113
-174.66
128.71
1
A
SER
141
-89.47
-159.50
1
A
ILE
167
173.12
130.32
1
A
GLN
180
81.30
14.54
1
A
GLU
209
-144.27
-42.94
1
A
ASP
219
-106.86
62.89
1
A
LEU
315
54.62
19.98
1
A
HIS
387
-76.88
-77.05
1
A
SER
393
-172.58
137.90
1
A
LEU
417
-34.40
126.62
1
A
GLN
430
-21.85
-69.27
1
A
ASN
445
33.08
56.55
1
A
ILE
502
-94.76
-61.33
1
A
GLU
525
52.65
-126.83
1
A
GLU
579
-55.02
-70.57
1
A
GLU
580
-48.21
-17.89
1
A
PRO
585
-44.75
100.31
48.348
1.21
0.00
0.00
-2.04
0.00
0.82
0.901
0.852
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.28074
0.22428
0.22706
0.22706
2.95
68.36
755
15109
14309
5.0
98.83
20.806
0.400
RANDOM
1
THROUGHOUT
0.0
0.0
MOLECULAR REPLACEMENT
0.515
0.80
0.80
1.20
PDB ENTRY 2D7D
MAXIMUM LIKELIHOOD
MASK
0.39
2.95
68.36
0
5311
48
84
5179
0.016
0.022
5403
1.713
2.002
7315
6.527
5.000
654
36.008
24.038
260
20.405
15.000
938
18.861
15.000
47
0.101
0.200
829
0.005
0.020
4055
0.246
0.200
2515
0.323
0.200
3670
0.169
0.200
182
0.243
0.200
80
0.181
0.200
4
0.696
1.500
3356
1.234
2.000
5264
1.799
3.000
2317
3.052
4.500
2051
0.359
0.265
3.026
71
1010
1087
20
99.17
73.7
2.95
68.36
2NMV
15109
2.0
2.0
0.094
0.094
1
15.9
5.3
99.1
0.369
2.95
3.03
5.2
1087
0.369
5.5
99.3
refinement
REFMAC
5.2.0005
data collection
ADSC
QUANTUM
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
phasing
MOLREP
Damage detection by the UvrABC pathway: Crystal structure of UvrB bound to fluorescein-adducted DNA
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
ASP
16
B
ASP
16
HELX_P
A
GLU
30
B
GLU
30
1
1
15
A
GLY
44
B
GLY
44
HELX_P
A
ASN
57
B
ASN
57
1
2
14
A
ASN
66
B
ASN
66
HELX_P
A
PHE
81
B
PHE
81
1
3
16
A
ASN
116
B
ASN
116
HELX_P
A
ARG
133
B
ARG
133
1
4
18
A
VAL
142
B
VAL
142
HELX_P
A
TYR
146
B
TYR
146
5
5
5
A
SER
150
B
SER
150
HELX_P
A
VAL
158
B
VAL
158
1
6
9
A
GLU
168
B
GLU
168
HELX_P
A
ASP
178
B
ASP
178
1
7
11
A
ARG
252
B
ARG
252
HELX_P
A
ASN
277
B
ASN
277
1
8
26
A
LYS
279
B
LYS
279
HELX_P
A
GLY
301
B
GLY
301
1
9
23
A
GLY
305
B
GLY
305
HELX_P
A
ASN
308
B
ASN
308
5
10
4
A
TYR
309
B
TYR
309
HELX_P
A
THR
314
B
THR
314
1
11
6
A
THR
324
B
THR
324
HELX_P
A
PHE
329
B
PHE
329
1
12
6
A
GLU
339
B
GLU
339
HELX_P
A
HIS
364
B
HIS
364
1
13
26
A
LEU
368
B
LEU
368
HELX_P
A
ASN
374
B
ASN
374
5
14
7
A
ARG
378
B
ARG
378
HELX_P
A
LYS
384
B
LYS
384
1
15
7
A
GLY
397
B
GLY
397
HELX_P
A
THR
404
B
THR
404
1
16
8
A
GLY
429
B
GLY
429
HELX_P
A
GLU
443
B
GLU
443
1
17
15
A
THR
454
B
THR
454
HELX_P
A
ILE
468
B
ILE
468
1
18
15
A
LYS
480
B
LYS
480
HELX_P
A
GLY
494
B
GLY
494
1
19
15
A
ASP
521
B
ASP
521
HELX_P
A
GLU
525
B
GLU
525
5
20
5
A
SER
530
B
SER
530
HELX_P
A
ARG
540
B
ARG
540
1
21
11
A
ALA
541
B
ALA
541
HELX_P
A
ASN
544
B
ASN
544
5
22
4
A
THR
557
B
THR
557
HELX_P
A
GLY
582
B
GLY
582
1
23
26
A
LYS
621
B
LYS
621
HELX_P
A
ALA
641
B
ALA
641
1
24
21
A
ASP
643
B
ASP
643
HELX_P
A
LEU
654
B
LEU
654
1
25
12
B
LYS
622
C
LYS
1
HELX_P
B
ALA
641
C
ALA
20
1
26
20
B
ASP
643
C
ASP
22
HELX_P
B
ALA
659
C
ALA
38
1
27
17
covale
1.568
none
D
DT
3
A
C7
DT
3
1_555
D
NML
103
D
C1
NML
1_555
HYDROLASE/DNA
Protein-DNA complex, T-fluorescein, hairpin, HYDROLASE-DNA COMPLEX
UVRB_BACSU
UNP
2
1
P37954
MKDRFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNLIKEVNKPTLVIAHNKTLAGQLYSEFKEF
FPNNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPEEYREMVVS
LRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEIFPASRDEHCVRVEFFGDEIERIREVDALTGEILGDRDH
VAIFPASHFVTRAEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGFCSGIENYSRHLTLRPPGS
TPYTLLDYFPDDFMIVVDESHVTIPQVRGMFNGDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYE
IEHTDEMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTTLTKKMSEDLTDYLKEIGIKVNYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMYADKITKSM
EIAINETKRRREQQERFNEEHGITPKTINKEIRDVIRATVAAEDKAEYKTKAAPKLSKMTKKERQKVVEQMEHEMKEAAK
ALDFERAAELRDLLLELKAEG
UVRB_BACSU
UNP
3
622
P37954
KERQKVVEQMEHEMKEAAKALDFERAAELRDLLLELKA
2NMV
PDB
1
2NMV
1
661
2NMV
1
661
P37954
A
1
1
661
622
659
2NMV
622
659
P37954
B
2
1
38
1
5
2NMV
1
5
2NMV
D
3
1
5
7
2
2
2
6
6
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
A
ALA
85
B
ALA
85
A
PHE
89
B
PHE
89
A
VAL
136
B
VAL
136
A
ALA
140
B
ALA
140
A
THR
60
B
THR
60
A
ILE
63
B
ILE
63
A
MET
334
B
MET
334
A
ASP
338
B
ASP
338
A
ASN
388
B
ASN
388
A
VAL
392
B
VAL
392
A
HIS
34
B
HIS
34
A
GLY
39
B
GLY
39
A
VAL
408
B
VAL
408
A
GLN
410
B
GLN
410
A
TYR
93
B
TYR
93
A
GLN
97
B
GLN
97
A
ASP
112
B
ASP
112
A
ILE
115
B
ILE
115
A
ALA
100
B
ALA
100
A
TYR
101
B
TYR
101
A
PHE
108
B
PHE
108
A
ILE
109
B
ILE
109
A
VAL
159
B
VAL
159
A
ARG
162
B
ARG
162
A
HIS
240
B
HIS
240
A
ILE
243
B
ILE
243
A
ALA
182
B
ALA
182
A
ARG
183
B
ARG
183
A
THR
192
B
THR
192
A
ARG
196
B
ARG
196
A
VAL
199
B
VAL
199
A
ILE
202
B
ILE
202
A
HIS
210
B
HIS
210
A
PHE
216
B
PHE
216
A
ILE
221
B
ILE
221
A
ASP
228
B
ASP
228
A
ILE
234
B
ILE
234
A
ARG
238
B
ARG
238
A
LEU
421
B
LEU
421
A
ARG
425
B
ARG
425
A
ARG
548
B
ARG
548
A
TYR
552
B
TYR
552
A
VAL
514
B
VAL
514
A
ILE
519
B
ILE
519
A
ARG
447
B
ARG
447
A
THR
451
B
THR
451
A
VAL
498
B
VAL
498
A
GLY
501
B
GLY
501
A
VAL
472
B
VAL
472
A
LEU
475
B
LEU
475
BINDING SITE FOR RESIDUE ADP A 662
A
ADP
662
Software
13
BINDING SITE FOR RESIDUE NML D 103
D
NML
103
Software
2
BINDING SITE FOR RESIDUE FLU D 600
D
FLU
600
Software
5
A
TYR
11
B
TYR
11
13
1_555
A
GLN
12
B
GLN
12
13
1_555
A
GLN
14
B
GLN
14
13
1_555
A
GLN
17
B
GLN
17
13
1_555
A
ALA
40
B
ALA
40
13
1_555
A
GLY
42
B
GLY
42
13
1_555
A
THR
43
B
THR
43
13
1_555
A
GLY
44
B
GLY
44
13
1_555
A
LYS
45
B
LYS
45
13
1_555
A
THR
46
B
THR
46
13
1_555
A
PHE
47
B
PHE
47
13
1_555
A
PRO
414
B
PRO
414
13
1_555
A
ARG
543
B
ARG
543
13
1_555
D
DT
2
A
DT
2
2
1_555
D
DT
3
A
DT
3
2
1_555
A
GLY
71
B
GLY
71
5
1_555
A
TYR
74
B
TYR
74
5
1_555
A
SER
75
B
SER
75
5
1_555
A
ASN
116
B
ASN
116
5
1_555
A
ILE
119
B
ILE
119
5
1_555
19
P 21 21 21