0.013829
0.000000
0.000000
0.000000
0.011492
0.000000
0.000000
0.000000
0.005100
0.000000
0.000000
0.000000
Zhou, T.
Xu, L.
Dey, B.
Hessell, A.J.
Van Ryk, D.
Xiang, S.H.
Yang, X.
Zhang, M.Y.
Zwick, M.B.
Arthos, J.
Burton, D.R.
Dimitrov, D.S.
Sodroski, J.
Wyatt, R.
Nabel, G.J.
Kwong, P.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.000
90.000
72.310
87.018
196.078
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O6
180.156
beta-D-fructofuranose
beta-D-fructose; D-fructose; fructose
D-saccharide, beta linking
C6 H12 O6
180.156
alpha-D-glucopyranose
alpha-D-glucose; D-glucose; glucose
D-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
R
C
N
90
S
C
N
91
S
C
N
92
R
C
N
93
N
C
N
94
N
O
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
O
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
S
C
N
113
R
C
N
114
S
C
N
115
S
C
N
116
R
C
N
117
N
C
N
118
N
O
N
119
N
O
N
120
N
O
N
121
N
O
N
122
N
O
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
N
N
137
S
C
N
138
N
C
N
139
N
O
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
N
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
S
C
N
158
N
C
N
159
N
O
N
160
N
C
N
161
N
C
N
162
N
C
N
163
N
O
N
164
N
O
N
165
N
O
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
N
C
N
177
N
C
N
178
N
O
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
S
C
N
187
N
C
N
188
N
O
N
189
N
C
Y
190
N
C
Y
191
N
N
Y
192
N
C
Y
193
N
C
Y
194
N
N
N
195
N
O
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
S
C
N
214
N
C
N
215
N
C
N
216
N
C
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
N
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
S
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
R
C
N
299
R
C
N
300
R
C
N
301
S
C
N
302
R
C
N
303
N
C
N
304
N
C
N
305
N
C
N
306
N
N
N
307
N
O
N
308
N
O
N
309
N
O
N
310
N
O
N
311
N
O
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
N
N
352
S
C
N
353
N
C
N
354
N
O
N
355
N
C
N
356
N
C
N
357
N
C
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
N
373
N
O
N
374
N
O
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
N
N
383
S
C
N
384
N
C
N
385
N
O
N
386
R
C
N
387
N
O
N
388
N
C
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
N
N
400
S
C
N
401
N
C
N
402
N
O
N
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
N
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
N
413
N
O
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
N
N
427
S
C
N
428
N
C
N
429
N
O
N
430
N
C
Y
431
N
C
Y
432
N
C
Y
433
N
C
Y
434
N
C
Y
435
N
C
Y
436
N
C
N
437
N
O
N
438
N
O
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
N
N
451
S
C
N
452
N
C
N
453
N
O
N
454
N
C
N
455
N
C
N
456
N
C
N
457
N
O
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
doub
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
Y
188
N
sing
Y
189
N
doub
Y
190
N
doub
N
191
N
sing
Y
192
N
sing
N
193
N
sing
Y
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
doub
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
Y
326
N
doub
Y
327
N
sing
Y
328
N
sing
N
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
doub
Y
400
N
sing
Y
401
N
sing
N
402
N
sing
Y
403
N
sing
Y
404
N
doub
N
405
N
sing
Y
406
N
doub
N
407
N
sing
Y
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
doub
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
Y
423
N
doub
Y
424
N
sing
Y
425
N
sing
N
426
N
sing
Y
427
N
doub
N
428
N
sing
Y
429
N
doub
N
430
N
sing
Y
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
UK
Nature
NATUAS
0006
0028-0836
445
732
737
10.1038/nature05580
17301785
Structural definition of a conserved neutralization epitope on HIV-1 gp120.
2007
10.2210/pdb2ny6/pdb
pdb_00002ny6
100
1
CCD
2005-04-18
MARMOSAIC 300 mm CCD
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
22-ID
APS
1.0000
SYNCHROTRON
APS BEAMLINE 22-ID
35114.879
ENVELOPE GLYCOPROTEIN GP120
CORE
M95W, W96C, I109C, T123C, T257S, V275C,S334A, S375W, Q428C, G431C
1
man
polymer
20419.252
T-cell surface glycoprotein CD4
D1D2, N-TERMINAL TWO DOMAIN FRAGMENT
1
man
polymer
23399.898
ANTIBODY 17B, LIGHT CHAIN
ANTIGEN-BINDING FRAGMENT, FAB
1
man
polymer
24457.387
ANTIBODY 17B, HEAVY CHAIN
ANTIGEN-BINDING FRAGMENT, FAB
1
man
polymer
342.297
beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
1
man
branched
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
8
syn
non-polymer
18.015
water
115
nat
water
T-cell surface antigen T4/Leu-3
sucrose
no
no
EVVLVNVTENFNWCKNDMVEQMHEDICSLWDQSLKPCVKLCPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAIL
KCNNKTFNGTGPCTNVSTVQCTHGIRPVVSSQLLLNGSLAEEEVVIRSCNFTDNAKTIIVQLNTSVEINCTGAGHCNIAR
AKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHWFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTIT
LPCRIKQIINMWCKVCKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE
EVVLVNVTENFNWCKNDMVEQMHEDICSLWDQSLKPCVKLCPLCVGAGSCNTSVITQACPKVSFEPIPIHYCAPAGFAIL
KCNNKTFNGTGPCTNVSTVQCTHGIRPVVSSQLLLNGSLAEEEVVIRSCNFTDNAKTIIVQLNTSVEINCTGAGHCNIAR
AKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEIVTHWFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTIT
LPCRIKQIINMWCKVCKAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKIE
A
polypeptide(L)
no
no
MKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDS
DTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTC
TVLQNQKKVEFKIDIVVLAFQKAS
MKKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDS
DTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTC
TVLQNQKKVEFKIDIVVLAFQKAS
B
polypeptide(L)
no
no
DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQS
EDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN
SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
DIVMTQSPATLSVSPGERATLSCRASESVSSDLAWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGAEFTLTISSLQS
EDFAVYYCQQYNNWPPRYTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGN
SQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
C
polypeptide(L)
no
no
EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVY
LELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY
FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EVQLVESGAEVKKPGSSVKVSCKASGDTFIRYSFTWVRQAPGQGLEWMGRIITILDVAHYAPHLQGRVTITADKSTSTVY
LELRNLRSDDTAVYFCAGVYEGEADEGEYDNNGFLKHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDY
FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
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n
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n
n
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n
n
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n
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n
n
n
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n
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n
n
n
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n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lentivirus
HXBc2
human
Homo
sample
11676
Human immunodeficiency virus 1
embryonic cell line 293
9606
kidney
Homo sapiens
plasmid
CMVR
human
Homo
Escherichia
sample
CD4
9606
Homo sapiens
562
Escherichia coli
human
Homo
human
Homo
sample
9606
Homo sapiens
Epstein-Barr virus immortalized B-cell clone fused with a murine B-cell fusion partner
9606
Homo sapiens
human
Homo
human
Homo
sample
9606
Homo sapiens
Epstein-Barr virus immortalized B-cell clone fused with a murine B-cell fusion partner
9606
Homo sapiens
1
2.98
58.75
VAPOR DIFFUSION, HANGING DROP
5.6
8.3% PEG 8000, 7.4% MPD, 100 mM Na Citrate , pH 5.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
atom_site
chem_comp
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
struct_asym
struct_conn
struct_ref_seq_dif
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Refinement description
Atomic model
Data collection
Database references
Derived calculations
Non-polymer description
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2007-02-06
1
1
2008-05-01
1
2
2011-07-13
1
3
2017-10-18
2
0
2020-07-29
2
1
2023-08-30
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.src_method
_entity.type
_struct_asym.entity_id
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
SUC
4000
n
E
GLC
1
SUC
4000
n
E
FRU
2
DFrufb
b-D-fructofuranose
b-D-Fruf
Fru
DGlcpa
a-D-glucopyranose
a-D-Glcp
Glc
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
The same ternary complex at 2.5 A
The same ternary complex at 2.2 A
The same ternary complex from a primary isolate
RCSB
Y
RCSB
2006-11-20
REL
REL
oligosaccharide
DFrufb2-1DGlcpa
5
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1
5
PDB2Glycan
1.1.0
WURCS
[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}
5
PDB-CARE
LINUCS
C1
O2
GLC
FRU
1
2
5
O1
HO2
sing
n
n
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
HOH
water
1GC1
pdb entry 1GC1
PDB
experimental model
Nutrient
oligosaccharide with reducing-end-to-reducing-end glycosidic bond
sucrose
Oligosaccharide
NAG
734
6
NAG
NAG
734
A
NAG
762
6
NAG
NAG
762
A
NAG
776
6
NAG
NAG
776
A
NAG
789
6
NAG
NAG
789
A
NAG
795
6
NAG
NAG
795
A
NAG
839
6
NAG
NAG
839
A
NAG
886
6
NAG
NAG
886
A
NAG
948
6
NAG
NAG
948
A
HOH
4
7
HOH
HOH
949
A
HOH
6
7
HOH
HOH
950
A
HOH
7
7
HOH
HOH
951
A
HOH
9
7
HOH
HOH
952
A
HOH
10
7
HOH
HOH
953
A
HOH
15
7
HOH
HOH
954
A
HOH
19
7
HOH
HOH
955
A
HOH
20
7
HOH
HOH
956
A
HOH
21
7
HOH
HOH
957
A
HOH
22
7
HOH
HOH
958
A
HOH
24
7
HOH
HOH
959
A
HOH
26
7
HOH
HOH
960
A
HOH
28
7
HOH
HOH
961
A
HOH
30
7
HOH
HOH
962
A
HOH
32
7
HOH
HOH
963
A
HOH
34
7
HOH
HOH
964
A
HOH
35
7
HOH
HOH
965
A
HOH
37
7
HOH
HOH
966
A
HOH
40
7
HOH
HOH
967
A
HOH
44
7
HOH
HOH
968
A
HOH
45
7
HOH
HOH
969
A
HOH
49
7
HOH
HOH
970
A
HOH
55
7
HOH
HOH
971
A
HOH
60
7
HOH
HOH
972
A
HOH
62
7
HOH
HOH
973
A
HOH
64
7
HOH
HOH
974
A
HOH
74
7
HOH
HOH
975
A
HOH
81
7
HOH
HOH
976
A
HOH
83
7
HOH
HOH
977
A
HOH
87
7
HOH
HOH
978
A
HOH
89
7
HOH
HOH
979
A
HOH
91
7
HOH
HOH
980
A
HOH
94
7
HOH
HOH
981
A
HOH
106
7
HOH
HOH
982
A
HOH
111
7
HOH
HOH
983
A
HOH
112
7
HOH
HOH
984
A
HOH
114
7
HOH
HOH
985
A
HOH
116
7
HOH
HOH
986
A
HOH
118
7
HOH
HOH
987
A
HOH
119
7
HOH
HOH
988
A
HOH
124
7
HOH
HOH
989
A
HOH
128
7
HOH
HOH
990
A
HOH
5
7
HOH
HOH
5
B
HOH
8
7
HOH
HOH
8
B
HOH
13
7
HOH
HOH
13
B
HOH
17
7
HOH
HOH
17
B
HOH
29
7
HOH
HOH
29
B
HOH
31
7
HOH
HOH
31
B
HOH
54
7
HOH
HOH
54
B
HOH
57
7
HOH
HOH
57
B
HOH
63
7
HOH
HOH
63
B
HOH
66
7
HOH
HOH
66
B
HOH
70
7
HOH
HOH
70
B
HOH
76
7
HOH
HOH
76
B
HOH
108
7
HOH
HOH
108
B
HOH
109
7
HOH
HOH
109
B
HOH
131
7
HOH
HOH
131
B
HOH
132
7
HOH
HOH
132
B
HOH
133
7
HOH
HOH
133
B
HOH
16
7
HOH
HOH
16
C
HOH
18
7
HOH
HOH
18
C
HOH
23
7
HOH
HOH
23
C
HOH
36
7
HOH
HOH
36
C
HOH
41
7
HOH
HOH
41
C
HOH
46
7
HOH
HOH
46
C
HOH
50
7
HOH
HOH
50
C
HOH
51
7
HOH
HOH
51
C
HOH
53
7
HOH
HOH
53
C
HOH
58
7
HOH
HOH
58
C
HOH
67
7
HOH
HOH
67
C
HOH
73
7
HOH
HOH
73
C
HOH
82
7
HOH
HOH
82
C
HOH
84
7
HOH
HOH
84
C
HOH
85
7
HOH
HOH
85
C
HOH
86
7
HOH
HOH
86
C
HOH
97
7
HOH
HOH
97
C
HOH
113
7
HOH
HOH
113
C
HOH
122
7
HOH
HOH
122
C
HOH
129
7
HOH
HOH
129
C
HOH
134
7
HOH
HOH
134
C
HOH
135
7
HOH
HOH
135
C
HOH
136
7
HOH
HOH
136
C
HOH
137
7
HOH
HOH
137
C
HOH
138
7
HOH
HOH
138
C
HOH
139
7
HOH
HOH
139
C
HOH
140
7
HOH
HOH
140
C
HOH
141
7
HOH
HOH
141
C
HOH
1
7
HOH
HOH
1
D
HOH
2
7
HOH
HOH
2
D
HOH
3
7
HOH
HOH
3
D
HOH
11
7
HOH
HOH
11
D
HOH
12
7
HOH
HOH
12
D
HOH
14
7
HOH
HOH
14
D
HOH
25
7
HOH
HOH
25
D
HOH
27
7
HOH
HOH
27
D
HOH
38
7
HOH
HOH
38
D
HOH
39
7
HOH
HOH
39
D
HOH
43
7
HOH
HOH
43
D
HOH
47
7
HOH
HOH
47
D
HOH
48
7
HOH
HOH
48
D
HOH
52
7
HOH
HOH
52
D
HOH
56
7
HOH
HOH
56
D
HOH
65
7
HOH
HOH
65
D
HOH
77
7
HOH
HOH
77
D
HOH
80
7
HOH
HOH
80
D
HOH
95
7
HOH
HOH
95
D
HOH
96
7
HOH
HOH
96
D
HOH
98
7
HOH
HOH
98
D
HOH
101
7
HOH
HOH
101
D
HOH
102
7
HOH
HOH
102
D
HOH
103
7
HOH
HOH
103
D
HOH
105
7
HOH
HOH
105
D
HOH
107
7
HOH
HOH
107
D
HOH
120
7
HOH
HOH
120
D
HOH
130
7
HOH
HOH
130
D
GLU
83
n
1
GLU
83
A
VAL
84
n
2
VAL
84
A
VAL
85
n
3
VAL
85
A
LEU
86
n
4
LEU
86
A
VAL
87
n
5
VAL
87
A
ASN
88
n
6
ASN
88
A
VAL
89
n
7
VAL
89
A
THR
90
n
8
THR
90
A
GLU
91
n
9
GLU
91
A
ASN
92
n
10
ASN
92
A
PHE
93
n
11
PHE
93
A
ASN
94
n
12
ASN
94
A
TRP
95
n
13
TRP
95
A
CYS
96
n
14
CYS
96
A
LYS
97
n
15
LYS
97
A
ASN
98
n
16
ASN
98
A
ASP
99
n
17
ASP
99
A
MET
100
n
18
MET
100
A
VAL
101
n
19
VAL
101
A
GLU
102
n
20
GLU
102
A
GLN
103
n
21
GLN
103
A
MET
104
n
22
MET
104
A
HIS
105
n
23
HIS
105
A
GLU
106
n
24
GLU
106
A
ASP
107
n
25
ASP
107
A
ILE
108
n
26
ILE
108
A
CYS
109
n
27
CYS
109
A
SER
110
n
28
SER
110
A
LEU
111
n
29
LEU
111
A
TRP
112
n
30
TRP
112
A
ASP
113
n
31
ASP
113
A
GLN
114
n
32
GLN
114
A
SER
115
n
33
SER
115
A
LEU
116
n
34
LEU
116
A
LYS
117
n
35
LYS
117
A
PRO
118
n
36
PRO
118
A
CYS
119
n
37
CYS
119
A
VAL
120
n
38
VAL
120
A
LYS
121
n
39
LYS
121
A
LEU
122
n
40
LEU
122
A
CYS
123
n
41
CYS
123
A
PRO
124
n
42
PRO
124
A
LEU
125
n
43
LEU
125
A
CYS
126
n
44
CYS
126
A
VAL
127
n
45
VAL
127
A
GLY
128
n
46
GLY
128
A
ALA
129
n
47
ALA
129
A
GLY
194
n
48
GLY
194
A
SER
195
n
49
SER
195
A
CYS
196
n
50
CYS
196
A
ASN
197
n
51
ASN
197
A
THR
198
n
52
THR
198
A
SER
199
n
53
SER
199
A
VAL
200
n
54
VAL
200
A
ILE
201
n
55
ILE
201
A
THR
202
n
56
THR
202
A
GLN
203
n
57
GLN
203
A
ALA
204
n
58
ALA
204
A
CYS
205
n
59
CYS
205
A
PRO
206
n
60
PRO
206
A
LYS
207
n
61
LYS
207
A
VAL
208
n
62
VAL
208
A
SER
209
n
63
SER
209
A
PHE
210
n
64
PHE
210
A
GLU
211
n
65
GLU
211
A
PRO
212
n
66
PRO
212
A
ILE
213
n
67
ILE
213
A
PRO
214
n
68
PRO
214
A
ILE
215
n
69
ILE
215
A
HIS
216
n
70
HIS
216
A
TYR
217
n
71
TYR
217
A
CYS
218
n
72
CYS
218
A
ALA
219
n
73
ALA
219
A
PRO
220
n
74
PRO
220
A
ALA
221
n
75
ALA
221
A
GLY
222
n
76
GLY
222
A
PHE
223
n
77
PHE
223
A
ALA
224
n
78
ALA
224
A
ILE
225
n
79
ILE
225
A
LEU
226
n
80
LEU
226
A
LYS
227
n
81
LYS
227
A
CYS
228
n
82
CYS
228
A
ASN
229
n
83
ASN
229
A
ASN
230
n
84
ASN
230
A
LYS
231
n
85
LYS
231
A
THR
232
n
86
THR
232
A
PHE
233
n
87
PHE
233
A
ASN
234
n
88
ASN
234
A
GLY
235
n
89
GLY
235
A
THR
236
n
90
THR
236
A
GLY
237
n
91
GLY
237
A
PRO
238
n
92
PRO
238
A
CYS
239
n
93
CYS
239
A
THR
240
n
94
THR
240
A
ASN
241
n
95
ASN
241
A
VAL
242
n
96
VAL
242
A
SER
243
n
97
SER
243
A
THR
244
n
98
THR
244
A
VAL
245
n
99
VAL
245
A
GLN
246
n
100
GLN
246
A
CYS
247
n
101
CYS
247
A
THR
248
n
102
THR
248
A
HIS
249
n
103
HIS
249
A
GLY
250
n
104
GLY
250
A
ILE
251
n
105
ILE
251
A
ARG
252
n
106
ARG
252
A
PRO
253
n
107
PRO
253
A
VAL
254
n
108
VAL
254
A
VAL
255
n
109
VAL
255
A
SER
256
n
110
SER
256
A
SER
257
n
111
SER
257
A
GLN
258
n
112
GLN
258
A
LEU
259
n
113
LEU
259
A
LEU
260
n
114
LEU
260
A
LEU
261
n
115
LEU
261
A
ASN
262
n
116
ASN
262
A
GLY
263
n
117
GLY
263
A
SER
264
n
118
SER
264
A
LEU
265
n
119
LEU
265
A
ALA
266
n
120
ALA
266
A
GLU
267
n
121
GLU
267
A
GLU
268
n
122
GLU
268
A
GLU
269
n
123
GLU
269
A
VAL
270
n
124
VAL
270
A
VAL
271
n
125
VAL
271
A
ILE
272
n
126
ILE
272
A
ARG
273
n
127
ARG
273
A
SER
274
n
128
SER
274
A
CYS
275
n
129
CYS
275
A
ASN
276
n
130
ASN
276
A
PHE
277
n
131
PHE
277
A
THR
278
n
132
THR
278
A
ASP
279
n
133
ASP
279
A
ASN
280
n
134
ASN
280
A
ALA
281
n
135
ALA
281
A
LYS
282
n
136
LYS
282
A
THR
283
n
137
THR
283
A
ILE
284
n
138
ILE
284
A
ILE
285
n
139
ILE
285
A
VAL
286
n
140
VAL
286
A
GLN
287
n
141
GLN
287
A
LEU
288
n
142
LEU
288
A
ASN
289
n
143
ASN
289
A
THR
290
n
144
THR
290
A
SER
291
n
145
SER
291
A
VAL
292
n
146
VAL
292
A
GLU
293
n
147
GLU
293
A
ILE
294
n
148
ILE
294
A
ASN
295
n
149
ASN
295
A
CYS
296
n
150
CYS
296
A
THR
297
n
151
THR
297
A
GLY
298
n
152
GLY
298
A
ALA
299
n
153
ALA
299
A
GLY
329
n
154
GLY
329
A
HIS
330
n
155
HIS
330
A
CYS
331
n
156
CYS
331
A
ASN
332
n
157
ASN
332
A
ILE
333
n
158
ILE
333
A
ALA
334
n
159
ALA
334
A
ARG
335
n
160
ARG
335
A
ALA
336
n
161
ALA
336
A
LYS
337
n
162
LYS
337
A
TRP
338
n
163
TRP
338
A
ASN
339
n
164
ASN
339
A
ASN
340
n
165
ASN
340
A
THR
341
n
166
THR
341
A
LEU
342
n
167
LEU
342
A
LYS
343
n
168
LYS
343
A
GLN
344
n
169
GLN
344
A
ILE
345
n
170
ILE
345
A
ALA
346
n
171
ALA
346
A
SER
347
n
172
SER
347
A
LYS
348
n
173
LYS
348
A
LEU
349
n
174
LEU
349
A
ARG
350
n
175
ARG
350
A
GLU
351
n
176
GLU
351
A
GLN
352
n
177
GLN
352
A
PHE
353
n
178
PHE
353
A
GLY
354
n
179
GLY
354
A
ASN
355
n
180
ASN
355
A
ASN
356
n
181
ASN
356
A
LYS
357
n
182
LYS
357
A
THR
358
n
183
THR
358
A
ILE
359
n
184
ILE
359
A
ILE
360
n
185
ILE
360
A
PHE
361
n
186
PHE
361
A
LYS
362
n
187
LYS
362
A
GLN
363
n
188
GLN
363
A
SER
364
n
189
SER
364
A
SER
365
n
190
SER
365
A
GLY
366
n
191
GLY
366
A
GLY
367
n
192
GLY
367
A
ASP
368
n
193
ASP
368
A
PRO
369
n
194
PRO
369
A
GLU
370
n
195
GLU
370
A
ILE
371
n
196
ILE
371
A
VAL
372
n
197
VAL
372
A
THR
373
n
198
THR
373
A
HIS
374
n
199
HIS
374
A
TRP
375
n
200
TRP
375
A
PHE
376
n
201
PHE
376
A
ASN
377
n
202
ASN
377
A
CYS
378
n
203
CYS
378
A
GLY
379
n
204
GLY
379
A
GLY
380
n
205
GLY
380
A
GLU
381
n
206
GLU
381
A
PHE
382
n
207
PHE
382
A
PHE
383
n
208
PHE
383
A
TYR
384
n
209
TYR
384
A
CYS
385
n
210
CYS
385
A
ASN
386
n
211
ASN
386
A
SER
387
n
212
SER
387
A
THR
388
n
213
THR
388
A
GLN
389
n
214
GLN
389
A
LEU
390
n
215
LEU
390
A
PHE
391
n
216
PHE
391
A
ASN
392
n
217
ASN
392
A
SER
393
n
218
SER
393
A
THR
394
n
219
THR
394
A
TRP
395
n
220
TRP
395
A
PHE
396
n
221
PHE
396
A
ASN
397
n
222
ASN
397
A
n
223
398
A
n
224
399
A
n
225
400
A
n
226
401
A
n
227
402
A
n
228
403
A
n
229
404
A
n
230
405
A
n
231
406
A
n
232
407
A
n
233
408
A
n
234
409
A
GLY
410
n
235
GLY
410
A
SER
411
n
236
SER
411
A
ASP
412
n
237
ASP
412
A
THR
413
n
238
THR
413
A
ILE
414
n
239
ILE
414
A
THR
415
n
240
THR
415
A
LEU
416
n
241
LEU
416
A
PRO
417
n
242
PRO
417
A
CYS
418
n
243
CYS
418
A
ARG
419
n
244
ARG
419
A
ILE
420
n
245
ILE
420
A
LYS
421
n
246
LYS
421
A
GLN
422
n
247
GLN
422
A
ILE
423
n
248
ILE
423
A
ILE
424
n
249
ILE
424
A
ASN
425
n
250
ASN
425
A
MET
426
n
251
MET
426
A
TRP
427
n
252
TRP
427
A
CYS
428
n
253
CYS
428
A
LYS
429
n
254
LYS
429
A
VAL
430
n
255
VAL
430
A
CYS
431
n
256
CYS
431
A
LYS
432
n
257
LYS
432
A
ALA
433
n
258
ALA
433
A
MET
434
n
259
MET
434
A
TYR
435
n
260
TYR
435
A
ALA
436
n
261
ALA
436
A
PRO
437
n
262
PRO
437
A
PRO
438
n
263
PRO
438
A
ILE
439
n
264
ILE
439
A
SER
440
n
265
SER
440
A
GLY
441
n
266
GLY
441
A
GLN
442
n
267
GLN
442
A
ILE
443
n
268
ILE
443
A
ARG
444
n
269
ARG
444
A
CYS
445
n
270
CYS
445
A
SER
446
n
271
SER
446
A
SER
447
n
272
SER
447
A
ASN
448
n
273
ASN
448
A
ILE
449
n
274
ILE
449
A
THR
450
n
275
THR
450
A
GLY
451
n
276
GLY
451
A
LEU
452
n
277
LEU
452
A
LEU
453
n
278
LEU
453
A
LEU
454
n
279
LEU
454
A
THR
455
n
280
THR
455
A
ARG
456
n
281
ARG
456
A
ASP
457
n
282
ASP
457
A
GLY
458
n
283
GLY
458
A
GLY
459
n
284
GLY
459
A
ASN
460
n
285
ASN
460
A
SER
461
n
286
SER
461
A
ASN
462
n
287
ASN
462
A
ASN
463
n
288
ASN
463
A
GLU
464
n
289
GLU
464
A
SER
465
n
290
SER
465
A
GLU
466
n
291
GLU
466
A
ILE
467
n
292
ILE
467
A
PHE
468
n
293
PHE
468
A
ARG
469
n
294
ARG
469
A
PRO
470
n
295
PRO
470
A
GLY
471
n
296
GLY
471
A
GLY
472
n
297
GLY
472
A
GLY
473
n
298
GLY
473
A
ASP
474
n
299
ASP
474
A
MET
475
n
300
MET
475
A
ARG
476
n
301
ARG
476
A
ASP
477
n
302
ASP
477
A
ASN
478
n
303
ASN
478
A
TRP
479
n
304
TRP
479
A
ARG
480
n
305
ARG
480
A
SER
481
n
306
SER
481
A
GLU
482
n
307
GLU
482
A
LEU
483
n
308
LEU
483
A
TYR
484
n
309
TYR
484
A
LYS
485
n
310
LYS
485
A
TYR
486
n
311
TYR
486
A
LYS
487
n
312
LYS
487
A
VAL
488
n
313
VAL
488
A
VAL
489
n
314
VAL
489
A
LYS
490
n
315
LYS
490
A
ILE
491
n
316
ILE
491
A
n
317
492
A
n
1
1000
B
LYS
1001
n
2
LYS
1001
B
LYS
1002
n
3
LYS
1002
B
VAL
1003
n
4
VAL
1003
B
VAL
1004
n
5
VAL
1004
B
LEU
1005
n
6
LEU
1005
B
GLY
1006
n
7
GLY
1006
B
LYS
1007
n
8
LYS
1007
B
LYS
1008
n
9
LYS
1008
B
GLY
1009
n
10
GLY
1009
B
ASP
1010
n
11
ASP
1010
B
THR
1011
n
12
THR
1011
B
VAL
1012
n
13
VAL
1012
B
GLU
1013
n
14
GLU
1013
B
LEU
1014
n
15
LEU
1014
B
THR
1015
n
16
THR
1015
B
CYS
1016
n
17
CYS
1016
B
THR
1017
n
18
THR
1017
B
ALA
1018
n
19
ALA
1018
B
SER
1019
n
20
SER
1019
B
GLN
1020
n
21
GLN
1020
B
LYS
1021
n
22
LYS
1021
B
LYS
1022
n
23
LYS
1022
B
SER
1023
n
24
SER
1023
B
ILE
1024
n
25
ILE
1024
B
GLN
1025
n
26
GLN
1025
B
PHE
1026
n
27
PHE
1026
B
HIS
1027
n
28
HIS
1027
B
TRP
1028
n
29
TRP
1028
B
LYS
1029
n
30
LYS
1029
B
ASN
1030
n
31
ASN
1030
B
SER
1031
n
32
SER
1031
B
ASN
1032
n
33
ASN
1032
B
GLN
1033
n
34
GLN
1033
B
ILE
1034
n
35
ILE
1034
B
LYS
1035
n
36
LYS
1035
B
ILE
1036
n
37
ILE
1036
B
LEU
1037
n
38
LEU
1037
B
GLY
1038
n
39
GLY
1038
B
ASN
1039
n
40
ASN
1039
B
GLN
1040
n
41
GLN
1040
B
GLY
1041
n
42
GLY
1041
B
SER
1042
n
43
SER
1042
B
PHE
1043
n
44
PHE
1043
B
LEU
1044
n
45
LEU
1044
B
THR
1045
n
46
THR
1045
B
LYS
1046
n
47
LYS
1046
B
GLY
1047
n
48
GLY
1047
B
PRO
1048
n
49
PRO
1048
B
SER
1049
n
50
SER
1049
B
LYS
1050
n
51
LYS
1050
B
LEU
1051
n
52
LEU
1051
B
ASN
1052
n
53
ASN
1052
B
ASP
1053
n
54
ASP
1053
B
ARG
1054
n
55
ARG
1054
B
ALA
1055
n
56
ALA
1055
B
ASP
1056
n
57
ASP
1056
B
SER
1057
n
58
SER
1057
B
ARG
1058
n
59
ARG
1058
B
ARG
1059
n
60
ARG
1059
B
SER
1060
n
61
SER
1060
B
LEU
1061
n
62
LEU
1061
B
TRP
1062
n
63
TRP
1062
B
ASP
1063
n
64
ASP
1063
B
GLN
1064
n
65
GLN
1064
B
GLY
1065
n
66
GLY
1065
B
ASN
1066
n
67
ASN
1066
B
PHE
1067
n
68
PHE
1067
B
PRO
1068
n
69
PRO
1068
B
LEU
1069
n
70
LEU
1069
B
ILE
1070
n
71
ILE
1070
B
ILE
1071
n
72
ILE
1071
B
LYS
1072
n
73
LYS
1072
B
ASN
1073
n
74
ASN
1073
B
LEU
1074
n
75
LEU
1074
B
LYS
1075
n
76
LYS
1075
B
ILE
1076
n
77
ILE
1076
B
GLU
1077
n
78
GLU
1077
B
ASP
1078
n
79
ASP
1078
B
SER
1079
n
80
SER
1079
B
ASP
1080
n
81
ASP
1080
B
THR
1081
n
82
THR
1081
B
TYR
1082
n
83
TYR
1082
B
ILE
1083
n
84
ILE
1083
B
CYS
1084
n
85
CYS
1084
B
GLU
1085
n
86
GLU
1085
B
VAL
1086
n
87
VAL
1086
B
GLU
1087
n
88
GLU
1087
B
ASP
1088
n
89
ASP
1088
B
GLN
1089
n
90
GLN
1089
B
LYS
1090
n
91
LYS
1090
B
GLU
1091
n
92
GLU
1091
B
GLU
1092
n
93
GLU
1092
B
VAL
1093
n
94
VAL
1093
B
GLN
1094
n
95
GLN
1094
B
LEU
1095
n
96
LEU
1095
B
LEU
1096
n
97
LEU
1096
B
VAL
1097
n
98
VAL
1097
B
PHE
1098
n
99
PHE
1098
B
GLY
1099
n
100
GLY
1099
B
LEU
1100
n
101
LEU
1100
B
THR
1101
n
102
THR
1101
B
ALA
1102
n
103
ALA
1102
B
ASN
1103
n
104
ASN
1103
B
SER
1104
n
105
SER
1104
B
ASP
1105
n
106
ASP
1105
B
THR
1106
n
107
THR
1106
B
HIS
1107
n
108
HIS
1107
B
LEU
1108
n
109
LEU
1108
B
LEU
1109
n
110
LEU
1109
B
GLN
1110
n
111
GLN
1110
B
GLY
1111
n
112
GLY
1111
B
GLN
1112
n
113
GLN
1112
B
SER
1113
n
114
SER
1113
B
LEU
1114
n
115
LEU
1114
B
THR
1115
n
116
THR
1115
B
LEU
1116
n
117
LEU
1116
B
THR
1117
n
118
THR
1117
B
LEU
1118
n
119
LEU
1118
B
GLU
1119
n
120
GLU
1119
B
SER
1120
n
121
SER
1120
B
PRO
1121
n
122
PRO
1121
B
PRO
1122
n
123
PRO
1122
B
GLY
1123
n
124
GLY
1123
B
SER
1124
n
125
SER
1124
B
SER
1125
n
126
SER
1125
B
PRO
1126
n
127
PRO
1126
B
SER
1127
n
128
SER
1127
B
VAL
1128
n
129
VAL
1128
B
GLN
1129
n
130
GLN
1129
B
CYS
1130
n
131
CYS
1130
B
ARG
1131
n
132
ARG
1131
B
SER
1132
n
133
SER
1132
B
PRO
1133
n
134
PRO
1133
B
ARG
1134
n
135
ARG
1134
B
GLY
1135
n
136
GLY
1135
B
LYS
1136
n
137
LYS
1136
B
ASN
1137
n
138
ASN
1137
B
ILE
1138
n
139
ILE
1138
B
GLN
1139
n
140
GLN
1139
B
GLY
1140
n
141
GLY
1140
B
GLY
1141
n
142
GLY
1141
B
LYS
1142
n
143
LYS
1142
B
THR
1143
n
144
THR
1143
B
LEU
1144
n
145
LEU
1144
B
SER
1145
n
146
SER
1145
B
VAL
1146
n
147
VAL
1146
B
SER
1147
n
148
SER
1147
B
GLN
1148
n
149
GLN
1148
B
LEU
1149
n
150
LEU
1149
B
GLU
1150
n
151
GLU
1150
B
LEU
1151
n
152
LEU
1151
B
GLN
1152
n
153
GLN
1152
B
ASP
1153
n
154
ASP
1153
B
SER
1154
n
155
SER
1154
B
GLY
1155
n
156
GLY
1155
B
THR
1156
n
157
THR
1156
B
TRP
1157
n
158
TRP
1157
B
THR
1158
n
159
THR
1158
B
CYS
1159
n
160
CYS
1159
B
THR
1160
n
161
THR
1160
B
VAL
1161
n
162
VAL
1161
B
LEU
1162
n
163
LEU
1162
B
GLN
1163
n
164
GLN
1163
B
ASN
1164
n
165
ASN
1164
B
GLN
1165
n
166
GLN
1165
B
LYS
1166
n
167
LYS
1166
B
LYS
1167
n
168
LYS
1167
B
VAL
1168
n
169
VAL
1168
B
GLU
1169
n
170
GLU
1169
B
PHE
1170
n
171
PHE
1170
B
LYS
1171
n
172
LYS
1171
B
ILE
1172
n
173
ILE
1172
B
ASP
1173
n
174
ASP
1173
B
ILE
1174
n
175
ILE
1174
B
VAL
1175
n
176
VAL
1175
B
VAL
1176
n
177
VAL
1176
B
LEU
1177
n
178
LEU
1177
B
ALA
1178
n
179
ALA
1178
B
PHE
1179
n
180
PHE
1179
B
GLN
1180
n
181
GLN
1180
B
LYS
1181
n
182
LYS
1181
B
n
183
1182
B
n
184
1183
B
ASP
2001
n
1
ASP
2001
C
ILE
2002
n
2
ILE
2002
C
VAL
2003
n
3
VAL
2003
C
MET
2004
n
4
MET
2004
C
THR
2005
n
5
THR
2005
C
GLN
2006
n
6
GLN
2006
C
SER
2007
n
7
SER
2007
C
PRO
2008
n
8
PRO
2008
C
ALA
2009
n
9
ALA
2009
C
THR
2010
n
10
THR
2010
C
LEU
2011
n
11
LEU
2011
C
SER
2012
n
12
SER
2012
C
VAL
2013
n
13
VAL
2013
C
SER
2014
n
14
SER
2014
C
PRO
2015
n
15
PRO
2015
C
GLY
2016
n
16
GLY
2016
C
GLU
2017
n
17
GLU
2017
C
ARG
2018
n
18
ARG
2018
C
ALA
2019
n
19
ALA
2019
C
THR
2020
n
20
THR
2020
C
LEU
2021
n
21
LEU
2021
C
SER
2022
n
22
SER
2022
C
CYS
2023
n
23
CYS
2023
C
ARG
2024
n
24
ARG
2024
C
ALA
2025
n
25
ALA
2025
C
SER
2026
n
26
SER
2026
C
GLU
2027
n
27
GLU
2027
C
SER
2028
n
28
SER
2028
C
VAL
2029
n
29
VAL
2029
C
SER
2030
n
30
SER
2030
C
SER
2031
n
31
SER
2031
C
ASP
2032
n
32
ASP
2032
C
LEU
2033
n
33
LEU
2033
C
ALA
2034
n
34
ALA
2034
C
TRP
2035
n
35
TRP
2035
C
TYR
2036
n
36
TYR
2036
C
GLN
2037
n
37
GLN
2037
C
GLN
2038
n
38
GLN
2038
C
LYS
2039
n
39
LYS
2039
C
PRO
2040
n
40
PRO
2040
C
GLY
2041
n
41
GLY
2041
C
GLN
2042
n
42
GLN
2042
C
ALA
2043
n
43
ALA
2043
C
PRO
2044
n
44
PRO
2044
C
ARG
2045
n
45
ARG
2045
C
LEU
2046
n
46
LEU
2046
C
LEU
2047
n
47
LEU
2047
C
ILE
2048
n
48
ILE
2048
C
TYR
2049
n
49
TYR
2049
C
GLY
2050
n
50
GLY
2050
C
ALA
2051
n
51
ALA
2051
C
SER
2052
n
52
SER
2052
C
THR
2053
n
53
THR
2053
C
ARG
2054
n
54
ARG
2054
C
ALA
2055
n
55
ALA
2055
C
THR
2056
n
56
THR
2056
C
GLY
2057
n
57
GLY
2057
C
VAL
2058
n
58
VAL
2058
C
PRO
2059
n
59
PRO
2059
C
ALA
2060
n
60
ALA
2060
C
ARG
2061
n
61
ARG
2061
C
PHE
2062
n
62
PHE
2062
C
SER
2063
n
63
SER
2063
C
GLY
2064
n
64
GLY
2064
C
SER
2065
n
65
SER
2065
C
GLY
2066
n
66
GLY
2066
C
SER
2067
n
67
SER
2067
C
GLY
2068
n
68
GLY
2068
C
ALA
2069
n
69
ALA
2069
C
GLU
2070
n
70
GLU
2070
C
PHE
2071
n
71
PHE
2071
C
THR
2072
n
72
THR
2072
C
LEU
2073
n
73
LEU
2073
C
THR
2074
n
74
THR
2074
C
ILE
2075
n
75
ILE
2075
C
SER
2076
n
76
SER
2076
C
SER
2077
n
77
SER
2077
C
LEU
2078
n
78
LEU
2078
C
GLN
2079
n
79
GLN
2079
C
SER
2080
n
80
SER
2080
C
GLU
2081
n
81
GLU
2081
C
ASP
2082
n
82
ASP
2082
C
PHE
2083
n
83
PHE
2083
C
ALA
2084
n
84
ALA
2084
C
VAL
2085
n
85
VAL
2085
C
TYR
2086
n
86
TYR
2086
C
TYR
2087
n
87
TYR
2087
C
CYS
2088
n
88
CYS
2088
C
GLN
2089
n
89
GLN
2089
C
GLN
2090
n
90
GLN
2090
C
TYR
2091
n
91
TYR
2091
C
ASN
2092
n
92
ASN
2092
C
ASN
2093
n
93
ASN
2093
C
TRP
2094
n
94
TRP
2094
C
PRO
2095
n
95
PRO
2095
C
PRO
2096
n
96
PRO
2096
C
ARG
2097
n
97
ARG
2097
C
TYR
2098
n
98
TYR
2098
C
THR
2099
n
99
THR
2099
C
PHE
2100
n
100
PHE
2100
C
GLY
2101
n
101
GLY
2101
C
GLN
2102
n
102
GLN
2102
C
GLY
2103
n
103
GLY
2103
C
THR
2104
n
104
THR
2104
C
ARG
2105
n
105
ARG
2105
C
LEU
2106
n
106
LEU
2106
C
GLU
2107
n
107
GLU
2107
C
ILE
2108
n
108
ILE
2108
C
LYS
2109
n
109
LYS
2109
C
ARG
2110
n
110
ARG
2110
C
THR
2111
n
111
THR
2111
C
VAL
2112
n
112
VAL
2112
C
ALA
2113
n
113
ALA
2113
C
ALA
2114
n
114
ALA
2114
C
PRO
2115
n
115
PRO
2115
C
SER
2116
n
116
SER
2116
C
VAL
2117
n
117
VAL
2117
C
PHE
2118
n
118
PHE
2118
C
ILE
2119
n
119
ILE
2119
C
PHE
2120
n
120
PHE
2120
C
PRO
2121
n
121
PRO
2121
C
PRO
2122
n
122
PRO
2122
C
SER
2123
n
123
SER
2123
C
ASP
2124
n
124
ASP
2124
C
GLU
2125
n
125
GLU
2125
C
GLN
2126
n
126
GLN
2126
C
LEU
2127
n
127
LEU
2127
C
LYS
2128
n
128
LYS
2128
C
SER
2129
n
129
SER
2129
C
GLY
2130
n
130
GLY
2130
C
THR
2131
n
131
THR
2131
C
ALA
2132
n
132
ALA
2132
C
SER
2133
n
133
SER
2133
C
VAL
2134
n
134
VAL
2134
C
VAL
2135
n
135
VAL
2135
C
CYS
2136
n
136
CYS
2136
C
LEU
2137
n
137
LEU
2137
C
LEU
2138
n
138
LEU
2138
C
ASN
2139
n
139
ASN
2139
C
ASN
2140
n
140
ASN
2140
C
PHE
2141
n
141
PHE
2141
C
TYR
2142
n
142
TYR
2142
C
PRO
2143
n
143
PRO
2143
C
ARG
2144
n
144
ARG
2144
C
GLU
2145
n
145
GLU
2145
C
ALA
2146
n
146
ALA
2146
C
LYS
2147
n
147
LYS
2147
C
VAL
2148
n
148
VAL
2148
C
GLN
2149
n
149
GLN
2149
C
TRP
2150
n
150
TRP
2150
C
LYS
2151
n
151
LYS
2151
C
VAL
2152
n
152
VAL
2152
C
ASP
2153
n
153
ASP
2153
C
ASN
2154
n
154
ASN
2154
C
ALA
2155
n
155
ALA
2155
C
LEU
2156
n
156
LEU
2156
C
GLN
2157
n
157
GLN
2157
C
SER
2158
n
158
SER
2158
C
GLY
2159
n
159
GLY
2159
C
ASN
2160
n
160
ASN
2160
C
SER
2161
n
161
SER
2161
C
GLN
2162
n
162
GLN
2162
C
GLU
2163
n
163
GLU
2163
C
SER
2164
n
164
SER
2164
C
VAL
2165
n
165
VAL
2165
C
THR
2166
n
166
THR
2166
C
GLU
2167
n
167
GLU
2167
C
GLN
2168
n
168
GLN
2168
C
ASP
2169
n
169
ASP
2169
C
SER
2170
n
170
SER
2170
C
LYS
2171
n
171
LYS
2171
C
ASP
2172
n
172
ASP
2172
C
SER
2173
n
173
SER
2173
C
THR
2174
n
174
THR
2174
C
TYR
2175
n
175
TYR
2175
C
SER
2176
n
176
SER
2176
C
LEU
2177
n
177
LEU
2177
C
SER
2178
n
178
SER
2178
C
SER
2179
n
179
SER
2179
C
THR
2180
n
180
THR
2180
C
LEU
2181
n
181
LEU
2181
C
THR
2182
n
182
THR
2182
C
LEU
2183
n
183
LEU
2183
C
SER
2184
n
184
SER
2184
C
LYS
2185
n
185
LYS
2185
C
ALA
2186
n
186
ALA
2186
C
ASP
2187
n
187
ASP
2187
C
TYR
2188
n
188
TYR
2188
C
GLU
2189
n
189
GLU
2189
C
LYS
2190
n
190
LYS
2190
C
HIS
2191
n
191
HIS
2191
C
LYS
2192
n
192
LYS
2192
C
VAL
2193
n
193
VAL
2193
C
TYR
2194
n
194
TYR
2194
C
ALA
2195
n
195
ALA
2195
C
CYS
2196
n
196
CYS
2196
C
GLU
2197
n
197
GLU
2197
C
VAL
2198
n
198
VAL
2198
C
THR
2199
n
199
THR
2199
C
HIS
2200
n
200
HIS
2200
C
GLN
2201
n
201
GLN
2201
C
GLY
2202
n
202
GLY
2202
C
LEU
2203
n
203
LEU
2203
C
SER
2204
n
204
SER
2204
C
SER
2205
n
205
SER
2205
C
PRO
2206
n
206
PRO
2206
C
VAL
2207
n
207
VAL
2207
C
THR
2208
n
208
THR
2208
C
LYS
2209
n
209
LYS
2209
C
SER
2210
n
210
SER
2210
C
PHE
2211
n
211
PHE
2211
C
ASN
2212
n
212
ASN
2212
C
ARG
2213
n
213
ARG
2213
C
GLY
2214
n
214
GLY
2214
C
GLU
3001
n
1
GLU
3001
D
VAL
3002
n
2
VAL
3002
D
GLN
3003
n
3
GLN
3003
D
LEU
3004
n
4
LEU
3004
D
VAL
3005
n
5
VAL
3005
D
GLU
3006
n
6
GLU
3006
D
SER
3007
n
7
SER
3007
D
GLY
3008
n
8
GLY
3008
D
ALA
3009
n
9
ALA
3009
D
GLU
3010
n
10
GLU
3010
D
VAL
3011
n
11
VAL
3011
D
LYS
3012
n
12
LYS
3012
D
LYS
3013
n
13
LYS
3013
D
PRO
3014
n
14
PRO
3014
D
GLY
3015
n
15
GLY
3015
D
SER
3016
n
16
SER
3016
D
SER
3017
n
17
SER
3017
D
VAL
3018
n
18
VAL
3018
D
LYS
3019
n
19
LYS
3019
D
VAL
3020
n
20
VAL
3020
D
SER
3021
n
21
SER
3021
D
CYS
3022
n
22
CYS
3022
D
LYS
3023
n
23
LYS
3023
D
ALA
3024
n
24
ALA
3024
D
SER
3025
n
25
SER
3025
D
GLY
3026
n
26
GLY
3026
D
ASP
3027
n
27
ASP
3027
D
THR
3028
n
28
THR
3028
D
PHE
3029
n
29
PHE
3029
D
ILE
3030
n
30
ILE
3030
D
ARG
3031
n
31
ARG
3031
D
TYR
3032
n
32
TYR
3032
D
SER
3033
n
33
SER
3033
D
PHE
3034
n
34
PHE
3034
D
THR
3035
n
35
THR
3035
D
TRP
3036
n
36
TRP
3036
D
VAL
3037
n
37
VAL
3037
D
ARG
3038
n
38
ARG
3038
D
GLN
3039
n
39
GLN
3039
D
ALA
3040
n
40
ALA
3040
D
PRO
3041
n
41
PRO
3041
D
GLY
3042
n
42
GLY
3042
D
GLN
3043
n
43
GLN
3043
D
GLY
3044
n
44
GLY
3044
D
LEU
3045
n
45
LEU
3045
D
GLU
3046
n
46
GLU
3046
D
TRP
3047
n
47
TRP
3047
D
MET
3048
n
48
MET
3048
D
GLY
3049
n
49
GLY
3049
D
ARG
3050
n
50
ARG
3050
D
ILE
3051
n
51
ILE
3051
D
ILE
3052
n
52
ILE
3052
D
THR
3053
n
53
THR
3053
D
ILE
3054
n
54
ILE
3054
D
LEU
3055
n
55
LEU
3055
D
ASP
3056
n
56
ASP
3056
D
VAL
3057
n
57
VAL
3057
D
ALA
3058
n
58
ALA
3058
D
HIS
3059
n
59
HIS
3059
D
TYR
3060
n
60
TYR
3060
D
ALA
3061
n
61
ALA
3061
D
PRO
3062
n
62
PRO
3062
D
HIS
3063
n
63
HIS
3063
D
LEU
3064
n
64
LEU
3064
D
GLN
3065
n
65
GLN
3065
D
GLY
3066
n
66
GLY
3066
D
ARG
3067
n
67
ARG
3067
D
VAL
3068
n
68
VAL
3068
D
THR
3069
n
69
THR
3069
D
ILE
3070
n
70
ILE
3070
D
THR
3071
n
71
THR
3071
D
ALA
3072
n
72
ALA
3072
D
ASP
3073
n
73
ASP
3073
D
LYS
3074
n
74
LYS
3074
D
SER
3075
n
75
SER
3075
D
THR
3076
n
76
THR
3076
D
SER
3077
n
77
SER
3077
D
THR
3078
n
78
THR
3078
D
VAL
3079
n
79
VAL
3079
D
TYR
3080
n
80
TYR
3080
D
LEU
3081
n
81
LEU
3081
D
GLU
3082
n
82
GLU
3082
D
LEU
3083
n
83
LEU
3083
D
ARG
3084
n
84
ARG
3084
D
ASN
3085
n
85
ASN
3085
D
LEU
3086
n
86
LEU
3086
D
ARG
3087
n
87
ARG
3087
D
SER
3088
n
88
SER
3088
D
ASP
3089
n
89
ASP
3089
D
ASP
3090
n
90
ASP
3090
D
THR
3091
n
91
THR
3091
D
ALA
3092
n
92
ALA
3092
D
VAL
3093
n
93
VAL
3093
D
TYR
3094
n
94
TYR
3094
D
PHE
3095
n
95
PHE
3095
D
CYS
3096
n
96
CYS
3096
D
ALA
3097
n
97
ALA
3097
D
GLY
3098
n
98
GLY
3098
D
VAL
3099
n
99
VAL
3099
D
TYR
3100
n
100
TYR
3100
D
GLU
3101
n
101
GLU
3101
D
GLY
3102
n
102
GLY
3102
D
GLU
3103
n
103
GLU
3103
D
ALA
3104
n
104
ALA
3104
D
ASP
3105
n
105
ASP
3105
D
GLU
3106
n
106
GLU
3106
D
GLY
3107
n
107
GLY
3107
D
GLU
3108
n
108
GLU
3108
D
TYR
3109
n
109
TYR
3109
D
ASP
3110
n
110
ASP
3110
D
ASN
3111
n
111
ASN
3111
D
ASN
3112
n
112
ASN
3112
D
GLY
3113
n
113
GLY
3113
D
PHE
3114
n
114
PHE
3114
D
LEU
3115
n
115
LEU
3115
D
LYS
3116
n
116
LYS
3116
D
HIS
3117
n
117
HIS
3117
D
TRP
3118
n
118
TRP
3118
D
GLY
3119
n
119
GLY
3119
D
GLN
3120
n
120
GLN
3120
D
GLY
3121
n
121
GLY
3121
D
THR
3122
n
122
THR
3122
D
LEU
3123
n
123
LEU
3123
D
VAL
3124
n
124
VAL
3124
D
THR
3125
n
125
THR
3125
D
VAL
3126
n
126
VAL
3126
D
SER
3127
n
127
SER
3127
D
SER
3128
n
128
SER
3128
D
ALA
3129
n
129
ALA
3129
D
SER
3130
n
130
SER
3130
D
THR
3131
n
131
THR
3131
D
LYS
3132
n
132
LYS
3132
D
GLY
3133
n
133
GLY
3133
D
PRO
3134
n
134
PRO
3134
D
SER
3135
n
135
SER
3135
D
VAL
3136
n
136
VAL
3136
D
PHE
3137
n
137
PHE
3137
D
PRO
3138
n
138
PRO
3138
D
LEU
3139
n
139
LEU
3139
D
ALA
3140
n
140
ALA
3140
D
PRO
3141
n
141
PRO
3141
D
SER
3142
n
142
SER
3142
D
n
143
3143
D
n
144
3144
D
n
145
3145
D
n
146
3146
D
n
147
3147
D
n
148
3148
D
GLY
3149
n
149
GLY
3149
D
THR
3150
n
150
THR
3150
D
ALA
3151
n
151
ALA
3151
D
ALA
3152
n
152
ALA
3152
D
LEU
3153
n
153
LEU
3153
D
GLY
3154
n
154
GLY
3154
D
CYS
3155
n
155
CYS
3155
D
LEU
3156
n
156
LEU
3156
D
VAL
3157
n
157
VAL
3157
D
LYS
3158
n
158
LYS
3158
D
ASP
3159
n
159
ASP
3159
D
TYR
3160
n
160
TYR
3160
D
PHE
3161
n
161
PHE
3161
D
PRO
3162
n
162
PRO
3162
D
GLU
3163
n
163
GLU
3163
D
PRO
3164
n
164
PRO
3164
D
VAL
3165
n
165
VAL
3165
D
THR
3166
n
166
THR
3166
D
VAL
3167
n
167
VAL
3167
D
SER
3168
n
168
SER
3168
D
TRP
3169
n
169
TRP
3169
D
ASN
3170
n
170
ASN
3170
D
SER
3171
n
171
SER
3171
D
GLY
3172
n
172
GLY
3172
D
ALA
3173
n
173
ALA
3173
D
LEU
3174
n
174
LEU
3174
D
THR
3175
n
175
THR
3175
D
SER
3176
n
176
SER
3176
D
GLY
3177
n
177
GLY
3177
D
VAL
3178
n
178
VAL
3178
D
HIS
3179
n
179
HIS
3179
D
THR
3180
n
180
THR
3180
D
PHE
3181
n
181
PHE
3181
D
PRO
3182
n
182
PRO
3182
D
ALA
3183
n
183
ALA
3183
D
VAL
3184
n
184
VAL
3184
D
LEU
3185
n
185
LEU
3185
D
GLN
3186
n
186
GLN
3186
D
SER
3187
n
187
SER
3187
D
SER
3188
n
188
SER
3188
D
GLY
3189
n
189
GLY
3189
D
LEU
3190
n
190
LEU
3190
D
TYR
3191
n
191
TYR
3191
D
SER
3192
n
192
SER
3192
D
LEU
3193
n
193
LEU
3193
D
SER
3194
n
194
SER
3194
D
SER
3195
n
195
SER
3195
D
VAL
3196
n
196
VAL
3196
D
VAL
3197
n
197
VAL
3197
D
THR
3198
n
198
THR
3198
D
VAL
3199
n
199
VAL
3199
D
PRO
3200
n
200
PRO
3200
D
SER
3201
n
201
SER
3201
D
SER
3202
n
202
SER
3202
D
SER
3203
n
203
SER
3203
D
LEU
3204
n
204
LEU
3204
D
GLY
3205
n
205
GLY
3205
D
THR
3206
n
206
THR
3206
D
GLN
3207
n
207
GLN
3207
D
THR
3208
n
208
THR
3208
D
TYR
3209
n
209
TYR
3209
D
ILE
3210
n
210
ILE
3210
D
CYS
3211
n
211
CYS
3211
D
ASN
3212
n
212
ASN
3212
D
VAL
3213
n
213
VAL
3213
D
ASN
3214
n
214
ASN
3214
D
HIS
3215
n
215
HIS
3215
D
LYS
3216
n
216
LYS
3216
D
PRO
3217
n
217
PRO
3217
D
SER
3218
n
218
SER
3218
D
ASN
3219
n
219
ASN
3219
D
THR
3220
n
220
THR
3220
D
LYS
3221
n
221
LYS
3221
D
VAL
3222
n
222
VAL
3222
D
ASP
3223
n
223
ASP
3223
D
LYS
3224
n
224
LYS
3224
D
LYS
3225
n
225
LYS
3225
D
VAL
3226
n
226
VAL
3226
D
GLU
3227
n
227
GLU
3227
D
PRO
3228
n
228
PRO
3228
D
n
229
3229
D
2.5635
-1.8518
0.0186
8.6955
-0.4918
2.0947
-0.0067
0.1423
-0.3960
-0.2724
0.0794
-0.0061
0.4171
0.0304
-0.0727
0.3702
-0.0685
-0.0510
-0.1753
-0.0273
-0.1548
refined
23.7910
-26.7450
79.0320
X-RAY DIFFRACTION
1.9680
-1.0081
0.5901
3.6186
-0.1884
2.5389
0.0148
0.0295
-0.1068
0.0868
-0.0369
-0.2672
0.1404
0.1709
0.0220
0.1346
0.0164
-0.0079
-0.3418
0.0539
-0.2783
refined
37.0390
-15.5880
90.4440
X-RAY DIFFRACTION
6.6338
2.0500
-3.6656
2.5608
-1.6789
4.3767
-0.1741
0.4277
-0.2552
-0.2855
-0.0412
-0.2985
0.1817
-0.2540
0.2153
0.4624
0.0484
0.1474
-0.1427
0.0190
-0.2038
refined
44.3870
-8.2030
67.2310
X-RAY DIFFRACTION
4.4044
3.7139
-1.4237
10.4140
-2.4654
3.9717
-0.1987
-0.3243
-0.1210
-0.0424
-0.0182
-0.0425
0.4039
-0.2077
0.2169
0.2840
-0.0137
0.0458
-0.1017
0.0123
-0.3733
refined
61.8870
16.6860
55.6350
X-RAY DIFFRACTION
1.2721
-1.0253
0.1900
5.2204
0.9369
1.8084
-0.0498
-0.1608
-0.0551
0.2499
-0.0658
0.1466
0.1053
-0.1359
0.1156
0.1380
0.0161
0.0023
-0.3360
0.0046
-0.3571
refined
3.2190
22.1870
90.0330
X-RAY DIFFRACTION
1.1978
-1.0698
0.5631
2.0482
-0.7155
9.3629
0.0914
0.2629
0.2323
-0.1870
-0.2605
0.2873
-1.1689
-0.9981
0.1691
0.3950
0.2958
-0.0853
-0.0729
-0.0626
-0.0965
refined
-12.2210
49.4650
72.8790
X-RAY DIFFRACTION
1.4184
-1.3806
0.7357
3.6932
-1.7795
4.3373
0.1411
0.0711
-0.0084
-0.1985
-0.1690
-0.1753
0.2879
0.1945
0.0278
0.0694
0.0076
0.0282
-0.4056
-0.0084
-0.3654
refined
15.4210
18.3020
72.7170
X-RAY DIFFRACTION
3.4945
-0.6196
0.5564
5.7874
3.0704
7.6572
-0.0073
0.0431
0.5806
-0.3448
0.2650
-0.4190
-1.2826
0.2644
-0.2577
0.4402
-0.0670
0.0076
-0.3240
-0.0021
-0.2440
refined
3.9920
51.2570
68.8430
X-RAY DIFFRACTION
A
83
A
1
A
254
A
108
X-RAY DIFFRACTION
1
A
475
A
300
A
491
A
316
X-RAY DIFFRACTION
1
A
255
A
109
A
474
A
299
X-RAY DIFFRACTION
2
B
1001
B
2
B
1097
B
98
X-RAY DIFFRACTION
3
B
1098
B
99
B
1181
B
182
X-RAY DIFFRACTION
4
C
2001
C
1
C
2110
C
110
X-RAY DIFFRACTION
5
C
2111
C
111
C
2214
C
214
X-RAY DIFFRACTION
6
D
3001
D
1
D
3127
D
127
X-RAY DIFFRACTION
7
D
3128
D
128
D
3228
D
228
X-RAY DIFFRACTION
8
author_defined_assembly
4
tetrameric
A
ASN
234
GLYCOSYLATION SITE
A
ASN
88
ASN
A
ASN
262
GLYCOSYLATION SITE
A
ASN
116
ASN
A
ASN
276
GLYCOSYLATION SITE
A
ASN
130
ASN
A
ASN
289
GLYCOSYLATION SITE
A
ASN
143
ASN
A
ASN
295
GLYCOSYLATION SITE
A
ASN
149
ASN
A
ASN
339
GLYCOSYLATION SITE
A
ASN
164
ASN
A
ASN
386
GLYCOSYLATION SITE
A
ASN
211
ASN
A
ASN
448
GLYCOSYLATION SITE
A
ASN
273
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
86
A
O
LEU
4
A
N
VAL
242
A
N
VAL
96
A
O
SER
243
A
O
SER
97
A
N
LYS
227
A
N
LYS
81
A
N
LEU
226
A
N
LEU
80
A
O
LYS
487
A
O
LYS
312
A
N
PHE
93
A
N
PHE
11
A
O
GLY
237
A
O
GLY
91
A
O
SER
199
A
O
SER
53
A
N
CYS
123
A
N
CYS
41
A
N
LEU
122
A
N
LEU
40
A
O
LYS
432
A
O
LYS
257
A
O
ALA
433
A
O
ALA
258
A
N
ILE
424
A
N
ILE
249
A
N
LEU
260
A
N
LEU
114
A
O
GLY
451
A
O
GLY
276
A
O
LEU
454
A
O
LEU
279
A
N
ILE
284
A
N
ILE
138
A
N
ASN
295
A
N
ASN
149
A
O
ASN
332
A
O
ASN
157
A
N
CYS
331
A
N
CYS
156
A
O
LEU
416
A
O
LEU
241
A
O
ARG
419
A
O
ARG
244
A
N
TYR
384
A
N
TYR
209
A
O
PHE
383
A
O
PHE
208
A
N
PHE
376
A
N
PHE
201
A
N
ARG
273
A
N
ARG
127
A
O
ILE
285
A
O
ILE
139
A
N
ILE
284
A
N
ILE
138
A
O
LEU
454
A
O
LEU
279
A
N
THR
455
A
N
THR
280
A
O
ARG
469
A
O
ARG
294
A
O
GLU
466
A
O
GLU
291
A
N
THR
358
A
N
THR
183
A
N
ILE
359
A
N
ILE
184
A
O
TRP
395
A
O
TRP
220
B
N
GLY
1006
B
N
GLY
7
B
O
LEU
1096
B
O
LEU
97
B
O
GLU
1091
B
O
GLU
92
B
N
CYS
1084
B
N
CYS
85
B
O
GLU
1085
B
O
GLU
86
B
N
HIS
1027
B
N
HIS
28
B
N
TRP
1028
B
N
TRP
29
B
O
ILE
1036
B
O
ILE
37
B
N
GLY
1038
B
N
GLY
39
B
O
THR
1045
B
O
THR
46
B
N
GLY
1006
B
N
GLY
7
B
O
LEU
1096
B
O
LEU
97
B
N
THR
1101
B
N
THR
102
B
O
THR
1117
B
O
THR
118
B
N
LEU
1114
B
N
LEU
115
B
O
VAL
1146
B
O
VAL
147
B
N
LEU
1014
B
N
LEU
15
B
O
LEU
1069
B
O
LEU
70
B
O
ILE
1070
B
O
ILE
71
B
N
ASP
1056
B
N
ASP
57
B
O
ILE
1138
B
O
ILE
139
B
N
CYS
1130
B
N
CYS
131
B
N
GLN
1129
B
N
GLN
130
B
O
THR
1160
B
O
THR
161
B
N
GLN
1163
B
N
GLN
164
B
O
LYS
1166
B
O
LYS
167
C
N
SER
2007
C
N
SER
7
C
O
SER
2022
C
O
SER
22
C
N
LEU
2021
C
N
LEU
21
C
O
LEU
2073
C
O
LEU
73
C
O
THR
2074
C
O
THR
74
C
N
SER
2063
C
N
SER
63
C
N
LEU
2011
C
N
LEU
11
C
O
ARG
2105
C
O
ARG
105
C
O
THR
2104
C
O
THR
104
C
N
TYR
2086
C
N
TYR
86
C
O
VAL
2085
C
O
VAL
85
C
N
GLN
2038
C
N
GLN
38
C
N
TRP
2035
C
N
TRP
35
C
O
LEU
2047
C
O
LEU
47
C
N
TYR
2049
C
N
TYR
49
C
O
THR
2053
C
O
THR
53
C
N
LEU
2011
C
N
LEU
11
C
O
ARG
2105
C
O
ARG
105
C
O
THR
2104
C
O
THR
104
C
N
TYR
2086
C
N
TYR
86
C
N
GLN
2090
C
N
GLN
90
C
O
THR
2099
C
O
THR
99
C
N
PHE
2118
C
N
PHE
118
C
O
LEU
2137
C
O
LEU
137
C
N
LEU
2138
C
N
LEU
138
C
O
LEU
2177
C
O
LEU
177
C
O
THR
2180
C
O
THR
180
C
N
GLN
2162
C
N
GLN
162
C
N
GLN
2149
C
N
GLN
149
C
O
GLU
2197
C
O
GLU
197
C
N
VAL
2198
C
N
VAL
198
C
O
VAL
2207
C
O
VAL
207
D
N
GLN
3003
D
N
GLN
3
D
O
SER
3025
D
O
SER
25
D
N
VAL
3020
D
N
VAL
20
D
O
LEU
3081
D
O
LEU
81
D
O
GLU
3082
D
O
GLU
82
D
N
THR
3069
D
N
THR
69
D
N
LYS
3012
D
N
LYS
12
D
O
THR
3125
D
O
THR
125
D
O
VAL
3124
D
O
VAL
124
D
N
ALA
3092
D
N
ALA
92
D
O
PHE
3095
D
O
PHE
95
D
N
VAL
3037
D
N
VAL
37
D
N
PHE
3034
D
N
PHE
34
D
O
ILE
3051
D
O
ILE
51
D
N
ARG
3050
D
N
ARG
50
D
O
HIS
3059
D
O
HIS
59
D
N
LYS
3012
D
N
LYS
12
D
O
THR
3125
D
O
THR
125
D
O
VAL
3124
D
O
VAL
124
D
N
ALA
3092
D
N
ALA
92
D
N
GLY
3098
D
N
GLY
98
D
O
HIS
3117
D
O
HIS
117
D
N
PHE
3137
D
N
PHE
137
D
O
LEU
3156
D
O
LEU
156
D
N
VAL
3157
D
N
VAL
157
D
O
LEU
3193
D
O
LEU
193
D
O
VAL
3196
D
O
VAL
196
D
N
HIS
3179
D
N
HIS
179
D
N
PHE
3137
D
N
PHE
137
D
O
LEU
3156
D
O
LEU
156
D
N
VAL
3157
D
N
VAL
157
D
O
LEU
3193
D
O
LEU
193
D
O
SER
3192
D
O
SER
192
D
N
VAL
3184
D
N
VAL
184
D
N
SER
3168
D
N
SER
168
D
O
ASN
3212
D
O
ASN
212
D
N
HIS
3215
D
N
HIS
215
D
O
THR
3220
D
O
THR
220
D
N
SER
3168
D
N
SER
168
D
O
ASN
3212
D
O
ASN
212
D
N
TYR
3209
D
N
TYR
209
D
O
VAL
3226
D
O
VAL
226
1
A
SER
398
A
SER
223
1
Y
1
A
THR
399
A
THR
224
1
Y
1
A
TRP
400
A
TRP
225
1
Y
1
A
SER
401
A
SER
226
1
Y
1
A
THR
402
A
THR
227
1
Y
1
A
GLU
403
A
GLU
228
1
Y
1
A
GLY
404
A
GLY
229
1
Y
1
A
SER
405
A
SER
230
1
Y
1
A
ASN
406
A
ASN
231
1
Y
1
A
ASN
407
A
ASN
232
1
Y
1
A
THR
408
A
THR
233
1
Y
1
A
GLU
409
A
GLU
234
1
Y
1
A
GLU
492
A
GLU
317
1
Y
1
B
MET
1000
B
MET
1
1
Y
1
B
ALA
1182
B
ALA
183
1
Y
1
B
SER
1183
B
SER
184
1
Y
1
D
SER
3143
D
SER
143
1
Y
1
D
LYS
3144
D
LYS
144
1
Y
1
D
SER
3145
D
SER
145
1
Y
1
D
THR
3146
D
THR
146
1
Y
1
D
SER
3147
D
SER
147
1
Y
1
D
GLY
3148
D
GLY
148
1
Y
1
D
LYS
3229
D
LYS
229
1
Y
1
A
A
N
O
CYS
HOH
275
985
1.74
1
B
B
CD
O
PRO
HOH
1121
17
1.78
1
D
D
OD1
OH
ASP
TYR
3027
3032
1.86
1
A
A
N
O
GLY
HOH
379
956
1.94
1
A
A
NE2
O
GLN
HOH
422
967
1.95
1
B
B
CG
O
PRO
HOH
1121
17
1.95
1
C
C
O
O
LEU
HOH
2127
85
1.96
1
D
D
N
O
SER
HOH
3201
105
1.96
1
C
C
NE
O
ARG
HOH
2054
58
1.98
1
D
D
OG
OH
SER
TYR
3203
3209
2.02
1
D
D
O
O
ALA
HOH
3140
130
2.02
1
C
C
O
O
LEU
HOH
2183
41
2.08
1
A
A
ND2
C2
ASN
NAG
262
762
2.11
1
C
C
O
OH
TYR
TYR
2188
2194
2.12
1
B
B
O
N
VAL
ASP
1086
1088
2.13
1
D
D
O
O
THR
HOH
3150
39
2.13
1
A
A
CB
O
LYS
HOH
117
978
2.14
1
C
C
NH2
O
ARG
HOH
2144
84
2.14
1
D
D
O
OH
ASP
TYR
3090
3094
2.15
1
C
C
N
O
ARG
HOH
2061
73
2.16
1
C
C
NH1
O
ARG
HOH
2045
67
2.17
1
D
D
OE2
O
GLU
HOH
3108
120
2.17
1
C
C
O
O
ASN
HOH
2093
86
2.18
1
A
A
CG
C1
ASN
NAG
386
886
2.19
1
D
D
N
O
SER
HOH
3130
25
2.19
1
D
D
CB
CG
GLU
GLU
3227
3227
0.150
0.019
1.517
1.667
N
1
D
D
CG
CD
GLU
GLU
3227
3227
0.193
0.015
1.515
1.708
N
1
D
D
CD
OE1
GLU
GLU
3227
3227
0.148
0.011
1.252
1.400
N
1
D
D
CD
OE2
GLU
GLU
3227
3227
0.075
0.011
1.252
1.327
N
1
A
VAL
84
-172.46
114.05
1
A
CYS
126
-115.87
-157.36
1
A
VAL
127
45.81
-87.65
1
A
ALA
129
79.89
-98.31
1
A
SER
195
-61.72
-165.00
1
A
ASN
197
-43.05
101.98
1
A
ALA
221
-39.02
124.76
1
A
GLN
246
-52.12
-72.97
1
A
GLN
258
60.04
-56.64
1
A
GLU
268
-137.35
-83.87
1
A
ASN
276
155.04
87.90
1
A
ASN
339
-39.05
-36.24
1
A
CYS
378
-178.58
128.35
1
A
ASN
386
-61.86
98.34
1
A
ARG
419
-170.60
129.00
1
A
CYS
428
-59.76
-73.90
1
A
SER
461
168.15
92.15
1
A
ASN
462
-51.35
-0.36
1
A
ASP
474
-106.15
77.79
1
A
MET
475
-31.75
-23.49
1
B
LYS
1022
-71.84
-107.81
1
B
SER
1023
159.29
75.35
1
B
ILE
1024
-108.21
-166.42
1
B
LEU
1037
-175.81
140.84
1
B
PRO
1048
-69.34
38.57
1
B
ASN
1052
-10.90
-81.72
1
B
ASP
1056
176.68
152.68
1
B
PHE
1067
-107.27
63.82
1
B
GLU
1087
36.91
18.33
1
B
ASP
1088
83.17
-23.91
1
B
LYS
1136
-32.97
127.76
1
B
ALA
1178
-73.13
-155.93
1
B
PHE
1179
172.76
177.71
1
B
GLN
1180
-88.39
-145.76
1
C
GLU
2027
178.54
160.14
1
C
SER
2030
41.15
-122.00
1
C
PRO
2040
-34.41
111.43
1
C
PRO
2044
-59.24
170.39
1
C
LEU
2047
-106.26
-61.87
1
C
ALA
2051
84.13
-34.05
1
C
SER
2052
-153.58
19.88
1
C
ARG
2061
-58.92
-6.19
1
C
ALA
2084
-167.86
-163.38
1
C
TYR
2091
-145.34
53.22
1
C
PRO
2095
-48.45
163.50
1
C
ASN
2140
43.23
71.62
1
C
GLU
2167
-59.14
-179.01
1
C
TYR
2188
-36.17
-80.53
1
C
ARG
2213
-62.71
99.18
1
D
CYS
3022
-165.58
93.67
1
D
ASP
3027
158.93
-154.58
1
D
ILE
3030
-68.16
0.44
1
D
GLN
3065
-24.07
132.79
1
D
THR
3076
-146.24
17.25
1
D
ASP
3089
-68.14
1.38
1
D
ASP
3105
-51.12
-9.02
1
D
ASP
3159
75.91
60.97
1
D
SER
3192
-170.16
129.42
1
D
THR
3206
-123.89
-70.13
1
D
LYS
3221
-162.51
100.86
1
D
ASP
3223
-143.95
48.96
51.499
-4.30
0.00
0.00
2.12
0.00
2.18
0.931
0.857
Authors state that because crystals were small and subject to high radiation dosages during data collection, difference fouriers comparing the initial and final swatches of data were inspected to identify radiation-induced disulfide breakage, and the refined models were adjusted to reflect the initial, radiation-damage free structure. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.27577
0.19199
0.1959
2.80
42.37
1188
31422
23560
4.8
78.76
37.982
0.348
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.473
0.80
0.80
1.20
pdb entry 1GC1
MAXIMUM LIKELIHOOD
MASK
2.80
42.37
115
7332
135
0
7082
0.008
0.022
7386
1.032
1.970
10041
5.283
5.000
915
32.956
25.000
304
16.702
15.000
1227
14.507
15.000
31
0.079
0.200
1154
0.009
0.020
5443
0.302
0.300
3404
0.341
0.500
4998
0.278
0.500
542
0.310
0.300
61
0.258
0.500
9
1.336
2.000
4631
2.281
3.000
7414
1.245
2.000
3041
1.962
3.000
2627
0.525
0.33
2.868
33
633
20
29.44
2.800
50.000
2NY6
30838
28525
-3
0.151
1
4.800
3.400
92.500
0.581
2.80
2.90
1
2.60
65.00
0.496
2.90
3.02
1
2.90
80.90
0.402
3.02
3.15
1
3.20
91.30
0.322
3.15
3.32
1
3.50
96.70
0.249
3.32
3.53
1
3.60
98.40
0.206
3.53
3.80
1
3.70
98.80
0.161
3.80
4.18
1
3.70
98.80
0.125
4.18
4.79
1
3.70
98.40
0.109
4.79
6.03
1
3.70
98.40
0.07
6.03
50.00
1
3.50
96.70
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
Fortran_77
http://www.ccp4.ac.uk/main.html
REFMAC
program
5.2.0005
data extraction
PDB
sw-help@rcsb.rutgers.edu
April. 3, 2006
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
2.000
data collection
HKL-2000
data reduction
HKL-2000
data scaling
HKL-2000
phasing
CNS
HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, I109C, T123C, T257S, V275C,S334A, S375W, Q428C, G431C) Complexed with CD4 and Antibody 17b
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
6
N
N
7
N
N
7
N
N
7
N
N
7
N
N
A
ASN
98
A
ASN
16
HELX_P
A
LEU
116
A
LEU
34
1
1
19
A
ARG
335
A
ARG
160
HELX_P
A
PHE
353
A
PHE
178
1
2
19
A
ASP
368
A
ASP
193
HELX_P
A
THR
373
A
THR
198
1
3
6
A
SER
387
A
SER
212
HELX_P
A
PHE
391
A
PHE
216
5
4
5
A
MET
475
A
MET
300
HELX_P
A
TYR
484
A
TYR
309
1
5
10
B
LEU
1051
B
LEU
52
HELX_P
B
ASP
1053
B
ASP
54
5
6
3
B
ARG
1058
B
ARG
59
HELX_P
B
ASP
1063
B
ASP
64
1
7
6
B
LYS
1075
B
LYS
76
HELX_P
B
SER
1079
B
SER
80
5
8
5
B
GLU
1150
B
GLU
151
HELX_P
B
SER
1154
B
SER
155
5
9
5
C
GLN
2079
C
GLN
79
HELX_P
C
PHE
2083
C
PHE
83
5
10
5
C
SER
2123
C
SER
123
HELX_P
C
LYS
2128
C
LYS
128
1
11
6
C
LYS
2185
C
LYS
185
HELX_P
C
LYS
2190
C
LYS
190
1
12
6
D
THR
3028
D
THR
28
HELX_P
D
ILE
3030
D
ILE
30
5
13
3
D
ARG
3087
D
ARG
87
HELX_P
D
THR
3091
D
THR
91
5
14
5
D
GLU
3103
D
GLU
103
HELX_P
D
GLY
3107
D
GLY
107
5
15
5
D
PRO
3200
D
PRO
200
HELX_P
D
LEU
3204
D
LEU
204
5
16
5
disulf
2.046
A
CYS
96
A
SG
CYS
14
1_555
A
CYS
275
A
SG
CYS
129
1_555
disulf
2.051
A
CYS
109
A
SG
CYS
27
1_555
A
CYS
428
A
SG
CYS
253
1_555
disulf
2.054
A
CYS
119
A
SG
CYS
37
1_555
A
CYS
205
A
SG
CYS
59
1_555
disulf
2.055
A
CYS
123
A
SG
CYS
41
1_555
A
CYS
431
A
SG
CYS
256
1_555
disulf
2.041
A
CYS
126
A
SG
CYS
44
1_555
A
CYS
196
A
SG
CYS
50
1_555
disulf
2.039
A
CYS
218
A
SG
CYS
72
1_555
A
CYS
247
A
SG
CYS
101
1_555
disulf
2.051
A
CYS
228
A
SG
CYS
82
1_555
A
CYS
239
A
SG
CYS
93
1_555
disulf
2.040
A
CYS
296
A
SG
CYS
150
1_555
A
CYS
331
A
SG
CYS
156
1_555
disulf
2.055
A
CYS
378
A
SG
CYS
203
1_555
A
CYS
445
A
SG
CYS
270
1_555
disulf
2.041
A
CYS
385
A
SG
CYS
210
1_555
A
CYS
418
A
SG
CYS
243
1_555
disulf
2.036
B
CYS
1016
B
SG
CYS
17
1_555
B
CYS
1084
B
SG
CYS
85
1_555
disulf
2.048
B
CYS
1130
B
SG
CYS
131
1_555
B
CYS
1159
B
SG
CYS
160
1_555
disulf
2.071
C
CYS
2023
C
SG
CYS
23
1_555
C
CYS
2088
C
SG
CYS
88
1_555
disulf
2.045
C
CYS
2136
C
SG
CYS
136
1_555
C
CYS
2196
C
SG
CYS
196
1_555
disulf
2.059
D
CYS
3022
D
SG
CYS
22
1_555
D
CYS
3096
D
SG
CYS
96
1_555
disulf
2.042
D
CYS
3155
D
SG
CYS
155
1_555
D
CYS
3211
D
SG
CYS
211
1_555
covale
1.438
one
N-Glycosylation
A
ASN
234
A
ND2
ASN
88
1_555
A
NAG
734
F
C1
NAG
1_555
covale
1.444
one
N-Glycosylation
A
ASN
262
A
ND2
ASN
116
1_555
A
NAG
762
G
C1
NAG
1_555
covale
1.453
one
N-Glycosylation
A
ASN
276
A
ND2
ASN
130
1_555
A
NAG
776
H
C1
NAG
1_555
covale
1.441
one
N-Glycosylation
A
ASN
289
A
ND2
ASN
143
1_555
A
NAG
789
I
C1
NAG
1_555
covale
1.437
one
N-Glycosylation
A
ASN
295
A
ND2
ASN
149
1_555
A
NAG
795
J
C1
NAG
1_555
covale
1.448
one
N-Glycosylation
A
ASN
339
A
ND2
ASN
164
1_555
A
NAG
839
K
C1
NAG
1_555
covale
1.426
one
N-Glycosylation
A
ASN
386
A
ND2
ASN
211
1_555
A
NAG
886
L
C1
NAG
1_555
covale
1.446
one
N-Glycosylation
A
ASN
448
A
ND2
ASN
273
1_555
A
NAG
948
M
C1
NAG
1_555
covale
1.417
both
sing
E
GLC
1
E
C1
GLC
1_555
E
FRU
2
E
O2
FRU
1_555
VIRAL PROTEIN/IMMUNE SYSTEM
HIV, gp120, antibody, CD4, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX
C
SER
2007
C
SER
7
1
C
PRO
2008
C
PRO
8
-7.05
C
TRP
2094
C
TRP
94
1
C
PRO
2095
C
PRO
95
-5.25
C
TYR
2142
C
TYR
142
1
C
PRO
2143
C
PRO
143
4.39
D
PHE
3161
D
PHE
161
1
D
PRO
3162
D
PRO
162
-5.40
D
GLU
3163
D
GLU
163
1
D
PRO
3164
D
PRO
164
-1.72
Q8Q7Z9_9HIV1
UNP
1
Q8Q7Z9
CD4_HUMAN
UNP
2
26
P01730
KKVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSD
TYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCT
VLQNQKKVEFKIDIVVLAFQKAS
Q6P5S8_HUMAN
UNP
3
Q6P5S8
Q6N030_HUMAN
UNP
4
Q6N030
71
173
2NY6
195
297
Q8Q7Z9
A
1
49
151
26
208
2NY6
1001
1183
P01730
B
2
2
184
22
234
2NY6
2002
2214
Q6P5S8
C
3
2
214
23
240
2NY6
3004
3227
Q6N030
D
4
4
227
2
initiating methionine
MET
1000
2NY6
B
P01730
UNP
1
4
2
4
7
6
6
4
3
4
4
6
4
4
3
4
6
4
4
4
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
85
A
VAL
3
A
LEU
86
A
LEU
4
A
VAL
242
A
VAL
96
A
VAL
245
A
VAL
99
A
PHE
223
A
PHE
77
A
CYS
228
A
CYS
82
A
TYR
486
A
TYR
311
A
LYS
490
A
LYS
315
A
PHE
93
A
PHE
11
A
ASN
94
A
ASN
12
A
THR
236
A
THR
90
A
GLY
237
A
GLY
91
A
THR
198
A
THR
52
A
THR
202
A
THR
56
A
VAL
120
A
VAL
38
A
PRO
124
A
PRO
42
A
LYS
432
A
LYS
257
A
MET
434
A
MET
259
A
ILE
423
A
ILE
248
A
ASN
425
A
ASN
250
A
LEU
259
A
LEU
113
A
LEU
261
A
LEU
115
A
ARG
444
A
ARG
269
A
ARG
456
A
ARG
281
A
ILE
284
A
ILE
138
A
THR
297
A
THR
151
A
HIS
330
A
HIS
155
A
ALA
334
A
ALA
159
A
THR
413
A
THR
238
A
LYS
421
A
LYS
246
A
GLU
381
A
GLU
206
A
CYS
385
A
CYS
210
A
HIS
374
A
HIS
199
A
CYS
378
A
CYS
203
A
VAL
271
A
VAL
125
A
ARG
273
A
ARG
127
A
ILE
284
A
ILE
138
A
THR
297
A
THR
151
A
ARG
444
A
ARG
269
A
ARG
456
A
ARG
281
A
SER
465
A
SER
290
A
PRO
470
A
PRO
295
A
THR
358
A
THR
183
A
PHE
361
A
PHE
186
A
SER
393
A
SER
218
A
TRP
395
A
TRP
220
B
VAL
1003
B
VAL
4
B
LYS
1007
B
LYS
8
B
GLN
1089
B
GLN
90
B
ALA
1102
B
ALA
103
B
ASP
1080
B
ASP
81
B
VAL
1086
B
VAL
87
B
PHE
1026
B
PHE
27
B
ASN
1030
B
ASN
31
B
LYS
1035
B
LYS
36
B
GLN
1040
B
GLN
41
B
PHE
1043
B
PHE
44
B
LYS
1046
B
LYS
47
B
VAL
1003
B
VAL
4
B
LYS
1007
B
LYS
8
B
GLN
1089
B
GLN
90
B
ALA
1102
B
ALA
103
B
LEU
1114
B
LEU
115
B
GLU
1119
B
GLU
120
B
THR
1143
B
THR
144
B
VAL
1146
B
VAL
147
B
VAL
1012
B
VAL
13
B
LEU
1014
B
LEU
15
B
LEU
1069
B
LEU
70
B
ILE
1071
B
ILE
72
B
ALA
1055
B
ALA
56
B
ASP
1056
B
ASP
57
B
ASN
1137
B
ASN
138
B
GLY
1140
B
GLY
141
B
SER
1127
B
SER
128
B
ARG
1131
B
ARG
132
B
GLY
1155
B
GLY
156
B
GLN
1163
B
GLN
164
B
LYS
1166
B
LYS
167
B
ILE
1174
B
ILE
175
C
MET
2004
C
MET
4
C
SER
2007
C
SER
7
C
ALA
2019
C
ALA
19
C
ALA
2025
C
ALA
25
C
GLU
2070
C
GLU
70
C
ILE
2075
C
ILE
75
C
PHE
2062
C
PHE
62
C
SER
2067
C
SER
67
C
THR
2010
C
THR
10
C
VAL
2013
C
VAL
13
C
THR
2104
C
THR
104
C
ILE
2108
C
ILE
108
C
VAL
2085
C
VAL
85
C
GLN
2090
C
GLN
90
C
LEU
2033
C
LEU
33
C
GLN
2038
C
GLN
38
C
ARG
2045
C
ARG
45
C
TYR
2049
C
TYR
49
C
THR
2053
C
THR
53
C
ARG
2054
C
ARG
54
C
THR
2010
C
THR
10
C
VAL
2013
C
VAL
13
C
THR
2104
C
THR
104
C
ILE
2108
C
ILE
108
C
VAL
2085
C
VAL
85
C
GLN
2090
C
GLN
90
C
THR
2099
C
THR
99
C
PHE
2100
C
PHE
100
C
SER
2116
C
SER
116
C
PHE
2120
C
PHE
120
C
THR
2131
C
THR
131
C
PHE
2141
C
PHE
141
C
TYR
2175
C
TYR
175
C
SER
2184
C
SER
184
C
SER
2161
C
SER
161
C
VAL
2165
C
VAL
165
C
LYS
2147
C
LYS
147
C
VAL
2152
C
VAL
152
C
VAL
2193
C
VAL
193
C
THR
2199
C
THR
199
C
VAL
2207
C
VAL
207
C
ASN
2212
C
ASN
212
D
GLN
3003
D
GLN
3
D
GLU
3006
D
GLU
6
D
VAL
3018
D
VAL
18
D
SER
3025
D
SER
25
D
THR
3078
D
THR
78
D
LEU
3083
D
LEU
83
D
VAL
3068
D
VAL
68
D
ASP
3073
D
ASP
73
D
GLU
3010
D
GLU
10
D
LYS
3012
D
LYS
12
D
THR
3122
D
THR
122
D
VAL
3126
D
VAL
126
D
ALA
3092
D
ALA
92
D
TYR
3100
D
TYR
100
D
TYR
3032
D
TYR
32
D
GLN
3039
D
GLN
39
D
LEU
3045
D
LEU
45
D
ILE
3051
D
ILE
51
D
ALA
3058
D
ALA
58
D
TYR
3060
D
TYR
60
D
GLU
3010
D
GLU
10
D
LYS
3012
D
LYS
12
D
THR
3122
D
THR
122
D
VAL
3126
D
VAL
126
D
ALA
3092
D
ALA
92
D
TYR
3100
D
TYR
100
D
HIS
3117
D
HIS
117
D
TRP
3118
D
TRP
118
D
SER
3135
D
SER
135
D
LEU
3139
D
LEU
139
D
ALA
3151
D
ALA
151
D
TYR
3160
D
TYR
160
D
TYR
3191
D
TYR
191
D
VAL
3199
D
VAL
199
D
VAL
3178
D
VAL
178
D
THR
3180
D
THR
180
D
SER
3135
D
SER
135
D
LEU
3139
D
LEU
139
D
ALA
3151
D
ALA
151
D
TYR
3160
D
TYR
160
D
TYR
3191
D
TYR
191
D
VAL
3199
D
VAL
199
D
VAL
3184
D
VAL
184
D
LEU
3185
D
LEU
185
D
VAL
3165
D
VAL
165
D
TRP
3169
D
TRP
169
D
TYR
3209
D
TYR
209
D
HIS
3215
D
HIS
215
D
THR
3220
D
THR
220
D
VAL
3222
D
VAL
222
D
VAL
3165
D
VAL
165
D
TRP
3169
D
TRP
169
D
TYR
3209
D
TYR
209
D
HIS
3215
D
HIS
215
D
LYS
3225
D
LYS
225
D
VAL
3226
D
VAL
226
17
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