1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Bruncko, M.
Oost, T.K.
Belli, B.A.
Ding, H.
Joseph, M.K.
Kunzer, A.
Martineau, D.
McClellan, W.J.
Mitten, M.
Ng, S.C.
Nimmer, P.M.
Oltersdorf, T.
Park, C.M.
Petros, A.M.
Shoemaker, A.R.
Song, X.
Wang, X.
Wendt, M.D.
Zhang, H.
Fesik, S.W.
Rosenberg, S.H.
Elmore, S.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C36 H40 N4 O6 S2
688.856
4-(4-BENZYL-4-METHOXYPIPERIDIN-1-YL)-N-[(4-{[1,1-DIMETHYL-2-(PHENYLTHIO)ETHYL]AMINO}-3-NITROPHENYL)SULFONYL]BENZAMIDE
non-polymer
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
N
N
207
N
C
Y
208
N
C
Y
209
N
C
Y
210
N
C
Y
211
N
C
N
212
N
C
N
213
N
O
N
214
N
N
N
215
N
S
Y
216
N
C
Y
217
N
C
Y
218
N
C
Y
219
N
C
Y
220
N
C
Y
221
N
C
N
222
N
O
N
223
N
O
N
224
N
N
N
225
N
O
N
226
N
O
N
227
N
N
N
228
N
C
N
229
N
C
N
230
N
S
Y
231
N
C
Y
232
N
C
Y
233
N
C
Y
234
N
C
Y
235
N
C
Y
236
N
C
N
237
N
C
N
238
N
C
Y
239
N
C
Y
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
Y
247
N
C
Y
248
N
C
Y
249
N
C
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
N
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
N
320
N
C
N
321
N
S
N
322
N
C
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
N
C
N
380
N
O
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
N
N
390
S
C
N
391
N
C
N
392
N
O
N
393
R
C
N
394
N
O
N
395
N
C
N
396
N
O
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
N
N
407
S
C
N
408
N
C
N
409
N
O
N
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
N
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
C
N
444
N
O
N
445
N
O
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
N
N
458
S
C
N
459
N
C
N
460
N
O
N
461
N
C
N
462
N
C
N
463
N
C
N
464
N
O
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
Y
209
N
sing
Y
210
N
doub
Y
211
N
doub
N
212
N
sing
Y
213
N
doub
Y
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
doub
Y
225
N
doub
Y
226
N
sing
Y
227
N
sing
N
228
N
sing
N
229
N
sing
Y
230
N
doub
N
231
N
sing
Y
232
N
sing
Y
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
Y
247
N
doub
Y
248
N
sing
N
249
N
sing
Y
250
N
sing
Y
251
N
doub
N
252
N
sing
Y
253
N
sing
N
254
N
sing
Y
255
N
doub
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
Y
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
Y
273
N
sing
Y
274
N
doub
N
275
N
sing
Y
276
N
doub
N
277
N
sing
Y
278
N
sing
N
279
N
sing
Y
280
N
doub
Y
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
doub
N
345
N
sing
Y
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
Y
407
N
doub
Y
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
sing
Y
416
N
doub
N
417
N
sing
Y
418
N
doub
N
419
N
sing
Y
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
Y
435
N
doub
Y
436
N
sing
Y
437
N
sing
N
438
N
sing
Y
439
N
doub
N
440
N
sing
Y
441
N
doub
N
442
N
sing
Y
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
US
J.Med.Chem.
JMCMAR
0151
0022-2623
50
641
662
10.1021/jm061152t
17256834
Studies Leading to Potent, Dual Inhibitors of Bcl-2 and Bcl-xL.
2007
10.2210/pdb2o2m/pdb
pdb_00002o2m
1
SINGLE WAVELENGTH
M
1
1.0
16085.890
Apoptosis regulator Bcl-X
1
man
polymer
688.856
4-(4-BENZYL-4-METHOXYPIPERIDIN-1-YL)-N-[(4-{[1,1-DIMETHYL-2-(PHENYLTHIO)ETHYL]AMINO}-3-NITROPHENYL)SULFONYL]BENZAMIDE
1
syn
non-polymer
Bcl-2-like 1 protein
no
no
SQSNRELVVDFLSYKLSQKGYSAGGGGGGGGMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELF
RDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG
SQSNRELVVDFLSYKLSQKGYSAGGGGGGGGMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELF
RDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
BCL2L1, BCL2L, BCLX
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET30b
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
1
0
2007-02-27
1
1
2008-05-01
1
2
2011-07-13
1
3
2022-03-16
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2006-11-30
REL
LI0
4-(4-BENZYL-4-METHOXYPIPERIDIN-1-YL)-N-[(4-{[1,1-DIMETHYL-2-(PHENYLTHIO)ETHYL]AMINO}-3-NITROPHENYL)SULFONYL]BENZAMIDE
1
3D_13C-SEPARATED_NOESY
50 mM sodium phosphate
7.0
1
atm
303
K
simulated annealing
1
average-minimized
50mM sodium phosphate buffer; 90% H2O, 10% D2O
90% H2O/10% D2O
Brunger A. T. etall
refinement
CNS
600
Bruker
DRX
800
Bruker
DRX
LIG
1000
2
LI0
LI0
1000
A
SER
6
n
1
SER
6
A
GLN
7
n
2
GLN
7
A
SER
8
n
3
SER
8
A
ASN
9
n
4
ASN
9
A
ARG
10
n
5
ARG
10
A
GLU
11
n
6
GLU
11
A
LEU
12
n
7
LEU
12
A
VAL
13
n
8
VAL
13
A
VAL
14
n
9
VAL
14
A
ASP
15
n
10
ASP
15
A
PHE
16
n
11
PHE
16
A
LEU
17
n
12
LEU
17
A
SER
18
n
13
SER
18
A
TYR
19
n
14
TYR
19
A
LYS
20
n
15
LYS
20
A
LEU
21
n
16
LEU
21
A
SER
22
n
17
SER
22
A
GLN
23
n
18
GLN
23
A
LYS
24
n
19
LYS
24
A
GLY
25
n
20
GLY
25
A
TYR
26
n
21
TYR
26
A
SER
27
n
22
SER
27
A
ALA
28
n
23
ALA
28
A
GLY
29
n
24
GLY
29
A
GLY
30
n
25
GLY
30
A
GLY
31
n
26
GLY
31
A
GLY
32
n
27
GLY
32
A
GLY
33
n
28
GLY
33
A
GLY
34
n
29
GLY
34
A
GLY
35
n
30
GLY
35
A
GLY
36
n
31
GLY
36
A
MET
37
n
32
MET
37
A
ALA
38
n
33
ALA
38
A
ALA
89
n
34
ALA
89
A
VAL
90
n
35
VAL
90
A
LYS
91
n
36
LYS
91
A
GLN
92
n
37
GLN
92
A
ALA
93
n
38
ALA
93
A
LEU
94
n
39
LEU
94
A
ARG
95
n
40
ARG
95
A
GLU
96
n
41
GLU
96
A
ALA
97
n
42
ALA
97
A
GLY
98
n
43
GLY
98
A
ASP
99
n
44
ASP
99
A
GLU
100
n
45
GLU
100
A
PHE
101
n
46
PHE
101
A
GLU
102
n
47
GLU
102
A
LEU
103
n
48
LEU
103
A
ARG
104
n
49
ARG
104
A
TYR
105
n
50
TYR
105
A
ARG
106
n
51
ARG
106
A
ARG
107
n
52
ARG
107
A
ALA
108
n
53
ALA
108
A
PHE
109
n
54
PHE
109
A
SER
110
n
55
SER
110
A
ASP
111
n
56
ASP
111
A
LEU
112
n
57
LEU
112
A
THR
113
n
58
THR
113
A
SER
114
n
59
SER
114
A
GLN
115
n
60
GLN
115
A
LEU
116
n
61
LEU
116
A
HIS
117
n
62
HIS
117
A
ILE
118
n
63
ILE
118
A
THR
119
n
64
THR
119
A
PRO
120
n
65
PRO
120
A
GLY
121
n
66
GLY
121
A
THR
122
n
67
THR
122
A
ALA
123
n
68
ALA
123
A
TYR
124
n
69
TYR
124
A
GLN
125
n
70
GLN
125
A
SER
126
n
71
SER
126
A
PHE
127
n
72
PHE
127
A
GLU
128
n
73
GLU
128
A
GLN
129
n
74
GLN
129
A
VAL
130
n
75
VAL
130
A
VAL
131
n
76
VAL
131
A
ASN
132
n
77
ASN
132
A
GLU
133
n
78
GLU
133
A
LEU
134
n
79
LEU
134
A
PHE
135
n
80
PHE
135
A
ARG
136
n
81
ARG
136
A
ASP
137
n
82
ASP
137
A
GLY
138
n
83
GLY
138
A
VAL
139
n
84
VAL
139
A
ASN
140
n
85
ASN
140
A
TRP
141
n
86
TRP
141
A
GLY
142
n
87
GLY
142
A
ARG
143
n
88
ARG
143
A
ILE
144
n
89
ILE
144
A
VAL
145
n
90
VAL
145
A
ALA
146
n
91
ALA
146
A
PHE
147
n
92
PHE
147
A
PHE
148
n
93
PHE
148
A
SER
149
n
94
SER
149
A
PHE
150
n
95
PHE
150
A
GLY
151
n
96
GLY
151
A
GLY
152
n
97
GLY
152
A
ALA
153
n
98
ALA
153
A
LEU
154
n
99
LEU
154
A
CYS
155
n
100
CYS
155
A
VAL
156
n
101
VAL
156
A
GLU
157
n
102
GLU
157
A
SER
158
n
103
SER
158
A
VAL
159
n
104
VAL
159
A
ASP
160
n
105
ASP
160
A
LYS
161
n
106
LYS
161
A
GLU
162
n
107
GLU
162
A
MET
163
n
108
MET
163
A
GLN
164
n
109
GLN
164
A
VAL
165
n
110
VAL
165
A
LEU
166
n
111
LEU
166
A
VAL
167
n
112
VAL
167
A
SER
168
n
113
SER
168
A
ARG
169
n
114
ARG
169
A
ILE
170
n
115
ILE
170
A
ALA
171
n
116
ALA
171
A
ALA
172
n
117
ALA
172
A
TRP
173
n
118
TRP
173
A
MET
174
n
119
MET
174
A
ALA
175
n
120
ALA
175
A
THR
176
n
121
THR
176
A
TYR
177
n
122
TYR
177
A
LEU
178
n
123
LEU
178
A
ASN
179
n
124
ASN
179
A
ASP
180
n
125
ASP
180
A
HIS
181
n
126
HIS
181
A
LEU
182
n
127
LEU
182
A
GLU
183
n
128
GLU
183
A
PRO
184
n
129
PRO
184
A
TRP
185
n
130
TRP
185
A
ILE
186
n
131
ILE
186
A
GLN
187
n
132
GLN
187
A
GLU
188
n
133
GLU
188
A
ASN
189
n
134
ASN
189
A
GLY
190
n
135
GLY
190
A
GLY
191
n
136
GLY
191
A
TRP
192
n
137
TRP
192
A
ASP
193
n
138
ASP
193
A
THR
194
n
139
THR
194
A
PHE
195
n
140
PHE
195
A
VAL
196
n
141
VAL
196
A
GLU
197
n
142
GLU
197
A
LEU
198
n
143
LEU
198
A
TYR
199
n
144
TYR
199
A
GLY
200
n
145
GLY
200
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-5.47
0.90
118.30
112.83
A
A
A
CB
CG
OD2
ASP
ASP
ASP
193
193
193
N
1
A
A
CD
OE2
GLU
GLU
162
162
0.109
0.011
1.252
1.361
N
1
A
GLN
7
71.83
-65.21
1
A
TYR
26
-53.99
-174.74
1
A
ALA
28
173.50
-173.36
1
A
MET
37
63.53
-78.82
1
A
ALA
38
66.78
-80.82
1
A
TYR
105
-97.52
53.90
1
A
LEU
116
-175.18
119.30
1
A
HIS
117
-115.27
76.60
1
A
ASP
137
-104.07
45.91
1
A
MET
163
-150.84
66.94
1
A
ASN
179
-99.60
38.05
1
A
ASP
180
-177.43
39.23
1
A
HIS
181
175.89
-36.28
1
A
GLU
188
-97.48
30.05
1
A
ASN
189
-145.67
28.85
Solution structure of the anti-apoptotic protein Bcl-xL in complex with an acyl-sulfonamide-based ligand
1
N
N
2
N
N
A
GLN
7
A
GLN
2
HELX_P
A
LYS
24
A
LYS
19
1
1
18
A
ALA
38
A
ALA
33
HELX_P
A
TYR
105
A
TYR
50
1
2
18
A
TYR
105
A
TYR
50
HELX_P
A
SER
114
A
SER
59
1
3
10
A
ALA
123
A
ALA
68
HELX_P
A
GLU
133
A
GLU
78
1
4
11
A
LEU
134
A
LEU
79
HELX_P
A
GLY
138
A
GLY
83
5
5
5
A
ASN
140
A
ASN
85
HELX_P
A
LYS
161
A
LYS
106
1
6
22
A
LEU
166
A
LEU
111
HELX_P
A
ASN
179
A
ASN
124
1
7
14
A
LEU
182
A
LEU
127
HELX_P
A
GLU
188
A
GLU
133
1
8
7
A
GLY
190
A
GLY
135
HELX_P
A
TYR
199
A
TYR
144
1
9
10
APOPTOSIS
apoptosis, complex, bcl
BCLX_HUMAN
UNP
1
2
Q07817
SQSNRELVVDFLSYKLSQKGYS
BCLX_HUMAN
UNP
1
83
Q07817
MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVL
VSRIAAWMATYLNDHLEPWIQENGGWDTFVELYG
2
23
2O2M
6
27
Q07817
A
1
1
22
83
196
2O2M
37
200
Q07817
A
2
32
145
1
insertion
ALA
28
2O2M
A
Q07817
UNP
23
1
insertion
GLY
29
2O2M
A
Q07817
UNP
24
1
insertion
GLY
25
2O2M
A
Q07817
UNP
20
1
insertion
GLY
31
2O2M
A
Q07817
UNP
26
1
insertion
GLY
32
2O2M
A
Q07817
UNP
27
1
insertion
GLY
33
2O2M
A
Q07817
UNP
28
1
insertion
GLY
29
2O2M
A
Q07817
UNP
24
1
insertion
GLY
30
2O2M
A
Q07817
UNP
25
1
insertion
GLY
31
2O2M
A
Q07817
UNP
26
BINDING SITE FOR RESIDUE LI0 A 1000
A
LI0
1000
Software
12
A
PHE
101
A
PHE
46
12
1_555
A
TYR
105
A
TYR
50
12
1_555
A
LEU
112
A
LEU
57
12
1_555
A
GLU
133
A
GLU
78
12
1_555
A
LEU
134
A
LEU
79
12
1_555
A
ASN
140
A
ASN
85
12
1_555
A
TRP
141
A
TRP
86
12
1_555
A
GLY
142
A
GLY
87
12
1_555
A
ARG
143
A
ARG
88
12
1_555
A
VAL
145
A
VAL
90
12
1_555
A
PHE
195
A
PHE
140
12
1_555
A
TYR
199
A
TYR
144
12
1_555