0.037656
0.000000
0.011459
0.000000
0.025083
0.000000
0.000000
0.000000
0.028040
0.00000
0.00000
0.00000
Papagrigoriou, E.
Phillips, C.
Gileadi, C.
Elkins, J.
Salah, E.
Berridge, G.
Savitsky, P.
Gorrec, F.
Umeano, C.
Ugochukwu, E.
Gileadi, O.
Burgess, N.
Edwards, A.
Arrowsmith, C.H.
Weigelt, J.
Sundstrom, M.
Doyle, D.A.
Structural Genomics Consortium (SGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
106.93
90.00
26.556
39.867
37.278
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O2
62.068
1,2-ETHANEDIOL
ETHYLENE GLYCOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C N S -1
58.082
THIOCYANATE ION
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
S
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
C
N
104
N
C
N
105
N
O
N
106
N
N
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
N
N
119
S
C
N
120
N
C
N
121
N
O
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
O
N
126
N
O
N
127
N
O
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
N
C
N
139
N
C
N
140
N
O
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
Y
152
N
C
Y
153
N
N
Y
154
N
C
Y
155
N
C
Y
156
N
N
N
157
N
O
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
O
N
169
N
H
N
170
N
H
N
171
N
N
N
172
S
C
N
173
N
C
N
174
N
O
N
175
S
C
N
176
N
C
N
177
N
C
N
178
N
C
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
N
N
194
S
C
N
195
N
C
N
196
N
O
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
N
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
N
N
241
S
C
N
242
N
C
N
243
N
O
N
244
N
C
N
245
N
C
N
246
N
S
N
247
N
C
N
248
N
O
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
Y
265
N
C
Y
266
N
C
Y
267
N
C
Y
268
N
C
Y
269
N
C
Y
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
N
288
N
C
N
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
S
N
301
N
C
N
302
N
N
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
N
N
318
S
C
N
319
N
C
N
320
N
O
N
321
R
C
N
322
N
O
N
323
N
C
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
doub
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
Y
149
N
sing
Y
150
N
doub
Y
151
N
doub
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
Y
257
N
doub
Y
258
N
sing
Y
259
N
sing
N
260
N
sing
Y
261
N
doub
N
262
N
sing
Y
263
N
doub
N
264
N
sing
Y
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
trip
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
Y
328
N
doub
Y
329
N
sing
Y
330
N
sing
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
doub
N
335
N
sing
Y
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
To be Published
0353
The crystal structure of the first PDZ domain of human NHERF-2 (SLC9A3R2)
10.2210/pdb2ocs/pdb
pdb_00002ocs
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2006-11-26
MARMOSAIC 225 mm CCD
S(111)
SINGLE WAVELENGTH
M
x-ray
1
0.97875
1.0
X10SA
SLS
0.97875
SYNCHROTRON
SLS BEAMLINE X10SA
9785.057
Na(+)/H(+) exchange regulatory cofactor NHE-RF2
1
man
polymer
58.082
THIOCYANATE ION
1
syn
non-polymer
62.068
1,2-ETHANEDIOL
1
syn
non-polymer
18.015
water
85
nat
water
NHERF-2, Tyrosine kinase activator protein 1, TKA-1, SRY-interacting protein 1, SIP-1, Solute carrier family 9 isoform A3 regulatory factor 2, NHE3 kinase A regulatory protein E3KARP, Sodium-hydrogen exchanger regulatory factor 2
no
no
MPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLV
VDQEDTSV
MPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLV
VDQEDTSV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
SLC9A3R2, NHERF2
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
PNIC28-BSA4
1
1.93
36.23
VAPOR DIFFUSION, SITTING DROP
7.5
20% PEG 3350, 0.20M KSCN, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
Structural Genomics Consortium
SGC
software
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2007-01-16
1
1
2008-05-01
1
2
2011-07-13
1
3
2017-10-18
1
4
2023-12-27
1
5
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2006-12-21
REL
REL
SCN
THIOCYANATE ION
EDO
1,2-ETHANEDIOL
HOH
water
swissmodel generated model
SwissModel
in silico model
SCN
5712
2
SCN
SCN
5712
A
EDO
2762
3
EDO
EDO
2762
A
HOH
1
4
HOH
HOH
5713
A
HOH
2
4
HOH
HOH
5714
A
HOH
3
4
HOH
HOH
5715
A
HOH
4
4
HOH
HOH
5716
A
HOH
6
4
HOH
HOH
5717
A
HOH
10
4
HOH
HOH
5718
A
HOH
11
4
HOH
HOH
5719
A
HOH
13
4
HOH
HOH
5720
A
HOH
14
4
HOH
HOH
5721
A
HOH
15
4
HOH
HOH
5722
A
HOH
16
4
HOH
HOH
5723
A
HOH
17
4
HOH
HOH
5724
A
HOH
18
4
HOH
HOH
5725
A
HOH
21
4
HOH
HOH
5726
A
HOH
24
4
HOH
HOH
5727
A
HOH
25
4
HOH
HOH
5728
A
HOH
26
4
HOH
HOH
5729
A
HOH
28
4
HOH
HOH
5730
A
HOH
31
4
HOH
HOH
5731
A
HOH
34
4
HOH
HOH
5732
A
HOH
35
4
HOH
HOH
5733
A
HOH
36
4
HOH
HOH
5734
A
HOH
38
4
HOH
HOH
5735
A
HOH
39
4
HOH
HOH
5736
A
HOH
43
4
HOH
HOH
5737
A
HOH
44
4
HOH
HOH
5738
A
HOH
45
4
HOH
HOH
5739
A
HOH
46
4
HOH
HOH
5740
A
HOH
47
4
HOH
HOH
5741
A
HOH
51
4
HOH
HOH
5742
A
HOH
52
4
HOH
HOH
5743
A
HOH
54
4
HOH
HOH
5744
A
HOH
55
4
HOH
HOH
5745
A
HOH
58
4
HOH
HOH
5746
A
HOH
59
4
HOH
HOH
5747
A
HOH
60
4
HOH
HOH
5748
A
HOH
61
4
HOH
HOH
5749
A
HOH
62
4
HOH
HOH
5750
A
HOH
64
4
HOH
HOH
5751
A
HOH
65
4
HOH
HOH
5752
A
HOH
66
4
HOH
HOH
5753
A
HOH
69
4
HOH
HOH
5754
A
HOH
70
4
HOH
HOH
5755
A
HOH
74
4
HOH
HOH
5756
A
HOH
77
4
HOH
HOH
5757
A
HOH
79
4
HOH
HOH
5758
A
HOH
80
4
HOH
HOH
5759
A
HOH
81
4
HOH
HOH
5760
A
HOH
89
4
HOH
HOH
5761
A
HOH
91
4
HOH
HOH
5762
A
HOH
92
4
HOH
HOH
5763
A
HOH
93
4
HOH
HOH
5764
A
HOH
94
4
HOH
HOH
5765
A
HOH
95
4
HOH
HOH
5766
A
HOH
96
4
HOH
HOH
5767
A
HOH
97
4
HOH
HOH
5768
A
HOH
98
4
HOH
HOH
5769
A
HOH
99
4
HOH
HOH
5770
A
HOH
101
4
HOH
HOH
5771
A
HOH
105
4
HOH
HOH
5772
A
HOH
106
4
HOH
HOH
5773
A
HOH
107
4
HOH
HOH
5774
A
HOH
108
4
HOH
HOH
5775
A
HOH
109
4
HOH
HOH
5776
A
HOH
110
4
HOH
HOH
5777
A
HOH
111
4
HOH
HOH
5778
A
HOH
112
4
HOH
HOH
5779
A
HOH
113
4
HOH
HOH
5780
A
HOH
114
4
HOH
HOH
5781
A
HOH
115
4
HOH
HOH
5782
A
HOH
118
4
HOH
HOH
5783
A
HOH
119
4
HOH
HOH
5784
A
HOH
120
4
HOH
HOH
5785
A
HOH
122
4
HOH
HOH
5786
A
HOH
124
4
HOH
HOH
5787
A
HOH
127
4
HOH
HOH
5788
A
HOH
128
4
HOH
HOH
5789
A
HOH
129
4
HOH
HOH
5790
A
HOH
131
4
HOH
HOH
5791
A
HOH
132
4
HOH
HOH
5792
A
HOH
133
4
HOH
HOH
5793
A
HOH
135
4
HOH
HOH
5794
A
HOH
137
4
HOH
HOH
5795
A
HOH
138
4
HOH
HOH
5796
A
HOH
139
4
HOH
HOH
5797
A
MET
7
n
1
MET
7
A
PRO
8
n
2
PRO
8
A
ARG
9
n
3
ARG
9
A
LEU
10
n
4
LEU
10
A
CYS
11
n
5
CYS
11
A
ARG
12
n
6
ARG
12
A
LEU
13
n
7
LEU
13
A
VAL
14
n
8
VAL
14
A
ARG
15
n
9
ARG
15
A
GLY
16
n
10
GLY
16
A
GLU
17
n
11
GLU
17
A
GLN
18
n
12
GLN
18
A
GLY
19
n
13
GLY
19
A
TYR
20
n
14
TYR
20
A
GLY
21
n
15
GLY
21
A
PHE
22
n
16
PHE
22
A
HIS
23
n
17
HIS
23
A
LEU
24
n
18
LEU
24
A
HIS
25
n
19
HIS
25
A
GLY
26
n
20
GLY
26
A
GLU
27
n
21
GLU
27
A
n
22
28
A
n
23
29
A
n
24
30
A
ARG
30
n
25
ARG
31
A
GLY
31
n
26
GLY
32
A
GLN
32
n
27
GLN
33
A
PHE
33
n
28
PHE
34
A
ILE
34
n
29
ILE
35
A
ARG
35
n
30
ARG
36
A
ARG
36
n
31
ARG
37
A
VAL
37
n
32
VAL
38
A
GLU
38
n
33
GLU
39
A
PRO
39
n
34
PRO
40
A
GLY
40
n
35
GLY
41
A
SER
41
n
36
SER
42
A
PRO
42
n
37
PRO
43
A
ALA
43
n
38
ALA
44
A
GLU
44
n
39
GLU
45
A
ALA
45
n
40
ALA
46
A
ALA
46
n
41
ALA
47
A
ALA
47
n
42
ALA
48
A
LEU
48
n
43
LEU
49
A
ARG
49
n
44
ARG
50
A
ALA
50
n
45
ALA
51
A
GLY
51
n
46
GLY
52
A
ASP
52
n
47
ASP
53
A
ARG
53
n
48
ARG
54
A
LEU
54
n
49
LEU
55
A
VAL
55
n
50
VAL
56
A
GLU
56
n
51
GLU
57
A
VAL
57
n
52
VAL
58
A
ASN
58
n
53
ASN
59
A
GLY
59
n
54
GLY
60
A
VAL
60
n
55
VAL
61
A
ASN
61
n
56
ASN
62
A
VAL
62
n
57
VAL
63
A
GLU
63
n
58
GLU
64
A
GLY
64
n
59
GLY
65
A
GLU
65
n
60
GLU
66
A
THR
66
n
61
THR
67
A
HIS
67
n
62
HIS
68
A
HIS
68
n
63
HIS
69
A
GLN
69
n
64
GLN
70
A
VAL
70
n
65
VAL
71
A
VAL
71
n
66
VAL
72
A
GLN
72
n
67
GLN
73
A
ARG
73
n
68
ARG
74
A
ILE
74
n
69
ILE
75
A
LYS
75
n
70
LYS
76
A
ALA
76
n
71
ALA
77
A
VAL
77
n
72
VAL
78
A
GLU
78
n
73
GLU
79
A
GLY
79
n
74
GLY
80
A
GLN
80
n
75
GLN
81
A
THR
81
n
76
THR
82
A
ARG
82
n
77
ARG
83
A
LEU
83
n
78
LEU
84
A
LEU
84
n
79
LEU
85
A
VAL
85
n
80
VAL
86
A
VAL
86
n
81
VAL
87
A
ASP
87
n
82
ASP
88
A
GLN
88
n
83
GLN
89
A
GLU
89
n
84
GLU
90
A
ASP
90
n
85
ASP
91
A
THR
91
n
86
THR
92
A
SER
92
n
87
SER
93
A
VAL
93
n
88
VAL
94
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
CYS
11
A
N
CYS
5
A
O
LEU
84
A
O
LEU
78
A
O
VAL
87
A
O
VAL
81
A
N
ARG
54
A
N
ARG
48
A
N
VAL
58
A
N
VAL
52
A
O
VAL
61
A
O
VAL
55
A
N
HIS
23
A
N
HIS
17
A
O
ARG
36
A
O
ARG
30
1
A
CG
MET
7
A
CG
MET
1
1
Y
1
A
SD
MET
7
A
SD
MET
1
1
Y
1
A
CE
MET
7
A
CE
MET
1
1
Y
1
A
CG
GLU
17
A
CG
GLU
11
1
Y
1
A
CD
GLU
17
A
CD
GLU
11
1
Y
1
A
OE1
GLU
17
A
OE1
GLU
11
1
Y
1
A
OE2
GLU
17
A
OE2
GLU
11
1
Y
1
A
CB
GLN
18
A
CB
GLN
12
1
Y
1
A
CG
GLN
18
A
CG
GLN
12
1
Y
1
A
CD
GLN
18
A
CD
GLN
12
1
Y
1
A
OE1
GLN
18
A
OE1
GLN
12
1
Y
1
A
NE2
GLN
18
A
NE2
GLN
12
1
Y
1
A
CG
ARG
31
A
CG
ARG
25
1
Y
1
A
CD
ARG
31
A
CD
ARG
25
1
Y
1
A
NE
ARG
31
A
NE
ARG
25
1
Y
1
A
CZ
ARG
31
A
CZ
ARG
25
1
Y
1
A
NH1
ARG
31
A
NH1
ARG
25
1
Y
1
A
NH2
ARG
31
A
NH2
ARG
25
1
Y
1
A
LYS
28
A
LYS
22
1
Y
1
A
GLY
29
A
GLY
23
1
Y
1
A
ARG
30
A
ARG
24
1
Y
1
A
ALA
48
70.25
31.57
14.108
-0.29
0.00
0.03
-0.63
0.00
0.94
0.970
0.962
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.19829
0.15185
0.15411
0.15411
1.50
35.66
609
12062
11448
5.1
99.96
3.353
0.056
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.094
0.078
0.80
0.80
1.40
swissmodel generated model
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.50
35.66
91
762
7
0
664
0.021
0.021
682
0.002
0.020
474
1.941
1.948
920
1.222
3.000
1143
6.303
5.000
87
40.583
21.892
37
12.380
15.000
113
17.970
15.000
11
0.377
0.200
101
0.009
0.020
781
0.001
0.020
150
0.276
0.200
111
0.235
0.200
493
0.177
0.200
308
0.092
0.200
426
0.188
0.200
57
0.397
0.200
11
0.382
0.200
39
0.161
0.200
12
2.188
1.500
425
1.062
1.500
178
3.173
2.000
675
4.131
3.000
257
6.052
4.500
241
2.077
3.000
1156
9.877
3.000
91
5.218
3.000
1145
0.259
0.165
1.539
56
829
20
100.00
1.50
35.66
2OCS
12062
12057
0
0
0.0656
0.05
1
12.68
3.67
100.0
0.4595
1.50
1.60
5.4
2093
0.322
3.64
100
refinement
REFMAC
5.2.0019
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
phasing
PHASER
The crystal structure of the first PDZ domain of human NHERF-2 (SLC9A3R2)
1
N
N
2
N
N
3
N
N
4
N
N
A
SER
42
A
SER
36
HELX_P
A
ALA
47
A
ALA
41
1
1
6
A
THR
67
A
THR
61
HELX_P
A
ALA
77
A
ALA
71
1
2
11
STRUCTURAL PROTEIN
STRUCTURAL PROTEIN, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC
NHRF2_HUMAN
UNP
1
9
Q15599
PRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGQTRLLVV
DQE
9
91
2OCS
8
90
Q15599
A
1
2
84
1
initiating methionine
MET
7
2OCS
A
Q15599
UNP
1
1
cloning artifact
ASP
91
2OCS
A
Q15599
UNP
85
1
cloning artifact
THR
92
2OCS
A
Q15599
UNP
86
1
cloning artifact
SER
93
2OCS
A
Q15599
UNP
87
1
cloning artifact
VAL
94
2OCS
A
Q15599
UNP
88
4
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
9
A
ARG
3
A
VAL
14
A
VAL
8
A
GLN
81
A
GLN
75
A
ASP
88
A
ASP
82
A
ASP
53
A
ASP
47
A
VAL
58
A
VAL
52
A
VAL
61
A
VAL
55
A
ASN
62
A
ASN
56
A
PHE
22
A
PHE
16
A
GLY
26
A
GLY
20
A
GLN
33
A
GLN
27
A
VAL
38
A
VAL
32
BINDING SITE FOR RESIDUE SCN A 5712
A
SCN
5712
Software
2
BINDING SITE FOR RESIDUE EDO A 2762
A
EDO
2762
Software
5
A
HIS
25
A
HIS
19
2
1_555
A
ARG
36
A
ARG
30
2
1_555
A
ASN
59
A
ASN
53
5
1_555
A
GLN
81
A
GLN
75
5
1_555
A
ARG
83
A
ARG
77
5
1_555
A
HOH
5743
D
HOH
5
1_555
A
HOH
5753
D
HOH
5
1_555
4
P 1 21 1