0.008042 0.000000 0.000000 0.000000 0.008042 0.000000 0.000000 0.000000 0.022309 0.00000 0.00000 0.00000 King-Scott, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 124.351 124.351 44.824 C2 H3 O2 -1 59.044 ACETATE ION non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C2 H6 O S 78.133 BETA-MERCAPTOETHANOL non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking La 3 138.905 LANTHANUM (III) ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N O N 4 N C N 5 N H N 6 N H N 7 N H N 8 N N N 9 S C N 10 N C N 11 N O N 12 N C N 13 N O N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N N N 22 S C N 23 N C N 24 N O N 25 N C N 26 N C N 27 N C N 28 N N N 29 N C N 30 N N N 31 N N N 32 N O N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N N N 49 S C N 50 N C N 51 N O N 52 N C N 53 N C N 54 N O N 55 N N N 56 N O N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N N N 66 S C N 67 N C N 68 N O N 69 N C N 70 N C N 71 N O N 72 N O N 73 N O N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N C N 82 N C N 83 N O N 84 N S N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N N N 92 R C N 93 N C N 94 N O N 95 N C N 96 N S N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N N N 106 S C N 107 N C N 108 N O N 109 N C N 110 N C N 111 N C N 112 N O N 113 N N N 114 N O N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N N N 126 S C N 127 N C N 128 N O N 129 N C N 130 N C N 131 N C N 132 N O N 133 N O N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 N C N 146 N C N 147 N O N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N N N 155 S C N 156 N C N 157 N O N 158 N C Y 159 N C Y 160 N N Y 161 N C Y 162 N C Y 163 N N N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N O N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 S C N 183 N C N 184 N C N 185 N C N 186 N O N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N LA N 201 N N N 202 S C N 203 N C N 204 N O N 205 N C N 206 N C N 207 N C N 208 N C N 209 N O N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N N N 224 S C N 225 N C N 226 N O N 227 N C N 228 N C N 229 N C N 230 N C N 231 N N N 232 N O N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N N N 249 S C N 250 N C N 251 N O N 252 N C N 253 N C N 254 N S N 255 N C N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C Y 273 N C Y 274 N C Y 275 N C Y 276 N C Y 277 N C Y 278 N C N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N N N 292 S C N 293 N C N 294 N O N 295 N C N 296 N C N 297 N C N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C N 313 N O N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N N N 323 S C N 324 N C N 325 N O N 326 R C N 327 N O N 328 N C N 329 N O N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N N N 340 S C N 341 N C N 342 N O N 343 N C Y 344 N C Y 345 N C Y 346 N C Y 347 N N Y 348 N C Y 349 N C Y 350 N C Y 351 N C Y 352 N C N 353 N O N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N N N 367 S C N 368 N C N 369 N O N 370 N C Y 371 N C Y 372 N C Y 373 N C Y 374 N C Y 375 N C Y 376 N C N 377 N O N 378 N O N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N N N 391 S C N 392 N C N 393 N O N 394 N C N 395 N C N 396 N C N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N doub N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N doub N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N doub N 151 N sing N 152 N sing N 153 N sing N 154 N sing Y 155 N sing Y 156 N doub Y 157 N doub N 158 N sing Y 159 N sing N 160 N sing Y 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N doub N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N doub N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing Y 263 N doub Y 264 N sing Y 265 N sing N 266 N sing Y 267 N doub N 268 N sing Y 269 N doub N 270 N sing Y 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N doub N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub Y 337 N sing Y 338 N sing N 339 N sing Y 340 N sing Y 341 N doub N 342 N sing Y 343 N doub N 344 N sing Y 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N doub N 356 N sing N 357 N sing N 358 N sing N 359 N sing Y 360 N doub Y 361 N sing Y 362 N sing N 363 N sing Y 364 N doub N 365 N sing Y 366 N doub N 367 N sing Y 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 282 37717 37729 10.1074/jbc.M705081200 17942407 The Structure of a Full-length Response Regulator from Mycobacterium tuberculosis in a Stabilized Three-dimensional Domain-swapped, Activated State. 2007 10.2210/pdb2oqr/pdb pdb_00002oqr 100 1 CCD 2005-02-26 MAR CCD 165 mm Si [111], horizontally focusing SINGLE WAVELENGTH M x-ray 1 0.813 1.0 6.80 314272 0.136 0.96 2.700 50.000 19108 100.00 16.40 X11 EMBL/DESY, HAMBURG 0.813 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 25079.648 Sensory transduction protein regX3 1 man polymer 59.044 ACETATE ION 2 syn non-polymer 138.905 LANTHANUM (III) ION 5 syn non-polymer 78.133 BETA-MERCAPTOETHANOL 1 syn non-polymer 18.015 water 163 nat water no no GAMATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIM VTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLK EFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG GAMATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIM VTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLK EFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Mycobacterium Mycobacterium tuberculosis H37RV Escherichia sample regX3 83332 Mycobacterium tuberculosis H37Rv 562 Escherichia coli Rosetta (DE3) pLysS plasmid petM11 1 3.45 64.38 VAPOR DIFFUSION, HANGING DROP 6.5 0.2 M Calcium Acetate, 2-4% PEG 4000, 0.1 M Sodium Cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 294K 294 software chem_comp_atom chem_comp_bond database_2 diffrn_source struct_ref_seq_dif struct_sheet struct_site repository Initial release Derived calculations Version format compliance Refinement description Data collection Database references Derived calculations 1 0 2007-10-16 1 1 2011-07-13 1 2 2017-10-18 1 3 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _diffrn_source.pdbx_synchrotron_site _struct_ref_seq_dif.details _struct_sheet.number_strands _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id SHEET DETERMINATION METHOD: AUTHOR PROVIDED. THE BIOLOGICAL MOLECULE IS A 3D-DOMAIN SWAPPED DIMER. IN THIS DIMER THE BETA-SHEET A IS IN FACT 5-STRANDED WITH THE FIFTH STRAND COMING FROM THE SECOND MOLECULE. SHEET DETERMINATION METHOD: AUTHOR PROVIDED. THE BETA-SHEET B IS IN FACT AN ANTI-PARALLEL 4-STRANDED BETA-SHEET. IN ORDER TO REPRESENT THIS FEATURE S4 HAS BEEN DEFINED BELOW. RCSB Y RCSB 2007-02-01 REL REL 0.064 0.884 99.30 15.70 0.096 1.060 100.00 16.40 0.103 1.113 100.00 16.60 0.094 1.071 100.00 16.70 0.090 1.024 100.00 16.60 0.100 1.111 100.00 16.70 0.120 1.160 100.00 16.60 0.131 1.112 100.00 16.70 0.142 1.156 100.00 16.70 0.166 1.076 100.00 16.60 0.200 1.073 100.00 16.70 0.229 0.965 100.00 16.60 0.276 0.938 100.00 16.60 0.325 0.855 100.00 16.50 0.372 0.827 100.00 16.40 0.431 0.792 100.00 16.40 0.528 0.763 100.00 16.30 0.579 0.739 100.00 16.20 0.663 0.723 100.00 16.10 0.745 0.706 100.00 15.90 ACT ACETATE ION LA LANTHANUM (III) ION BME BETA-MERCAPTOETHANOL HOH water ACT 201 2 ACT ACT 228 A ACT 202 2 ACT ACT 229 A LA 301 3 LA LA 301 A LA 302 3 LA LA 302 A LA 303 3 LA LA 303 A LA 304 3 LA LA 304 A LA 305 3 LA LA 305 A BME 401 4 BME BME 401 A HOH 1 5 HOH HOH 402 A HOH 2 5 HOH HOH 403 A HOH 3 5 HOH HOH 404 A HOH 4 5 HOH HOH 405 A HOH 5 5 HOH HOH 406 A HOH 6 5 HOH HOH 407 A HOH 7 5 HOH HOH 408 A HOH 8 5 HOH HOH 409 A HOH 9 5 HOH HOH 410 A HOH 10 5 HOH HOH 411 A HOH 11 5 HOH HOH 412 A HOH 12 5 HOH HOH 413 A HOH 13 5 HOH HOH 414 A HOH 14 5 HOH HOH 415 A HOH 15 5 HOH HOH 416 A HOH 16 5 HOH HOH 417 A HOH 17 5 HOH HOH 418 A HOH 18 5 HOH HOH 419 A HOH 19 5 HOH HOH 420 A HOH 20 5 HOH HOH 421 A HOH 21 5 HOH HOH 422 A HOH 22 5 HOH HOH 423 A HOH 23 5 HOH HOH 424 A HOH 24 5 HOH HOH 425 A HOH 25 5 HOH HOH 426 A HOH 26 5 HOH HOH 427 A HOH 27 5 HOH HOH 428 A HOH 28 5 HOH HOH 429 A HOH 29 5 HOH HOH 430 A HOH 30 5 HOH HOH 431 A HOH 31 5 HOH HOH 432 A HOH 32 5 HOH HOH 433 A HOH 33 5 HOH HOH 434 A HOH 34 5 HOH HOH 435 A HOH 35 5 HOH HOH 436 A HOH 36 5 HOH HOH 437 A HOH 37 5 HOH HOH 438 A HOH 38 5 HOH HOH 439 A HOH 39 5 HOH HOH 440 A HOH 40 5 HOH HOH 441 A HOH 41 5 HOH HOH 442 A HOH 42 5 HOH HOH 443 A HOH 43 5 HOH HOH 444 A HOH 44 5 HOH HOH 445 A HOH 45 5 HOH HOH 446 A HOH 46 5 HOH HOH 447 A HOH 47 5 HOH HOH 448 A HOH 48 5 HOH HOH 449 A HOH 49 5 HOH HOH 450 A HOH 50 5 HOH HOH 451 A HOH 51 5 HOH HOH 452 A HOH 52 5 HOH HOH 453 A HOH 53 5 HOH HOH 454 A HOH 54 5 HOH HOH 455 A HOH 55 5 HOH HOH 456 A HOH 56 5 HOH HOH 457 A HOH 57 5 HOH HOH 458 A HOH 58 5 HOH HOH 459 A HOH 59 5 HOH HOH 460 A HOH 60 5 HOH HOH 461 A HOH 61 5 HOH HOH 462 A HOH 62 5 HOH HOH 463 A HOH 63 5 HOH HOH 464 A HOH 64 5 HOH HOH 465 A HOH 65 5 HOH HOH 466 A HOH 66 5 HOH HOH 467 A HOH 67 5 HOH HOH 468 A HOH 68 5 HOH HOH 469 A HOH 69 5 HOH HOH 470 A HOH 70 5 HOH HOH 471 A HOH 71 5 HOH HOH 472 A HOH 72 5 HOH HOH 473 A HOH 73 5 HOH HOH 474 A HOH 74 5 HOH HOH 475 A HOH 75 5 HOH HOH 476 A HOH 76 5 HOH HOH 477 A HOH 77 5 HOH HOH 478 A HOH 78 5 HOH HOH 479 A HOH 79 5 HOH HOH 480 A HOH 80 5 HOH HOH 481 A HOH 81 5 HOH HOH 482 A HOH 82 5 HOH HOH 483 A HOH 83 5 HOH HOH 484 A HOH 84 5 HOH HOH 485 A HOH 85 5 HOH HOH 486 A HOH 86 5 HOH HOH 487 A HOH 87 5 HOH HOH 488 A HOH 88 5 HOH HOH 489 A HOH 89 5 HOH HOH 490 A HOH 90 5 HOH HOH 491 A HOH 91 5 HOH HOH 492 A HOH 92 5 HOH HOH 493 A HOH 93 5 HOH HOH 494 A HOH 94 5 HOH HOH 495 A HOH 95 5 HOH HOH 496 A HOH 96 5 HOH HOH 497 A HOH 97 5 HOH HOH 498 A HOH 98 5 HOH HOH 499 A HOH 99 5 HOH HOH 500 A HOH 100 5 HOH HOH 501 A HOH 101 5 HOH HOH 502 A HOH 102 5 HOH HOH 503 A HOH 103 5 HOH HOH 504 A HOH 104 5 HOH HOH 505 A HOH 105 5 HOH HOH 506 A HOH 106 5 HOH HOH 507 A HOH 107 5 HOH HOH 508 A HOH 108 5 HOH HOH 509 A HOH 109 5 HOH HOH 510 A HOH 110 5 HOH HOH 511 A HOH 111 5 HOH HOH 512 A HOH 112 5 HOH HOH 513 A HOH 113 5 HOH HOH 514 A HOH 114 5 HOH HOH 515 A HOH 115 5 HOH HOH 516 A HOH 116 5 HOH HOH 517 A HOH 117 5 HOH HOH 518 A HOH 118 5 HOH HOH 519 A HOH 119 5 HOH HOH 520 A HOH 120 5 HOH HOH 521 A HOH 121 5 HOH HOH 522 A HOH 122 5 HOH HOH 523 A HOH 123 5 HOH HOH 524 A HOH 124 5 HOH HOH 525 A HOH 125 5 HOH HOH 526 A HOH 126 5 HOH HOH 527 A HOH 127 5 HOH HOH 528 A HOH 128 5 HOH HOH 529 A HOH 129 5 HOH HOH 530 A HOH 130 5 HOH HOH 531 A HOH 131 5 HOH HOH 532 A HOH 132 5 HOH HOH 533 A HOH 133 5 HOH HOH 534 A HOH 134 5 HOH HOH 535 A HOH 135 5 HOH HOH 536 A HOH 136 5 HOH HOH 537 A HOH 137 5 HOH HOH 538 A HOH 138 5 HOH HOH 539 A HOH 139 5 HOH HOH 540 A HOH 140 5 HOH HOH 541 A HOH 141 5 HOH HOH 542 A HOH 142 5 HOH HOH 543 A HOH 143 5 HOH HOH 544 A HOH 144 5 HOH HOH 545 A HOH 145 5 HOH HOH 546 A HOH 146 5 HOH HOH 547 A HOH 147 5 HOH HOH 548 A HOH 148 5 HOH HOH 549 A HOH 149 5 HOH HOH 550 A HOH 150 5 HOH HOH 551 A HOH 151 5 HOH HOH 552 A HOH 152 5 HOH HOH 553 A HOH 153 5 HOH HOH 554 A HOH 154 5 HOH HOH 555 A HOH 155 5 HOH HOH 556 A HOH 156 5 HOH HOH 557 A HOH 157 5 HOH HOH 558 A HOH 158 5 HOH HOH 559 A HOH 159 5 HOH HOH 560 A HOH 160 5 HOH HOH 561 A HOH 161 5 HOH HOH 562 A HOH 162 5 HOH HOH 563 A HOH 163 5 HOH HOH 564 A n 1 -2 A n 2 -1 A n 3 0 A ALA 1 n 4 ALA 1 A THR 2 n 5 THR 2 A SER 3 n 6 SER 3 A VAL 4 n 7 VAL 4 A LEU 5 n 8 LEU 5 A ILE 6 n 9 ILE 6 A VAL 7 n 10 VAL 7 A GLU 8 n 11 GLU 8 A ASP 9 n 12 ASP 9 A GLU 10 n 13 GLU 10 A GLU 11 n 14 GLU 11 A SER 12 n 15 SER 12 A LEU 13 n 16 LEU 13 A ALA 14 n 17 ALA 14 A ASP 15 n 18 ASP 15 A PRO 16 n 19 PRO 16 A LEU 17 n 20 LEU 17 A ALA 18 n 21 ALA 18 A PHE 19 n 22 PHE 19 A LEU 20 n 23 LEU 20 A LEU 21 n 24 LEU 21 A ARG 22 n 25 ARG 22 A LYS 23 n 26 LYS 23 A GLU 24 n 27 GLU 24 A GLY 25 n 28 GLY 25 A PHE 26 n 29 PHE 26 A GLU 27 n 30 GLU 27 A ALA 28 n 31 ALA 28 A THR 29 n 32 THR 29 A VAL 30 n 33 VAL 30 A VAL 31 n 34 VAL 31 A THR 32 n 35 THR 32 A ASP 33 n 36 ASP 33 A GLY 34 n 37 GLY 34 A PRO 35 n 38 PRO 35 A ALA 36 n 39 ALA 36 A ALA 37 n 40 ALA 37 A LEU 38 n 41 LEU 38 A ALA 39 n 42 ALA 39 A GLU 40 n 43 GLU 40 A PHE 41 n 44 PHE 41 A ASP 42 n 45 ASP 42 A ARG 43 n 46 ARG 43 A ALA 44 n 47 ALA 44 A GLY 45 n 48 GLY 45 A ALA 46 n 49 ALA 46 A ASP 47 n 50 ASP 47 A ILE 48 n 51 ILE 48 A VAL 49 n 52 VAL 49 A LEU 50 n 53 LEU 50 A LEU 51 n 54 LEU 51 A ASP 52 n 55 ASP 52 A LEU 53 n 56 LEU 53 A MET 54 n 57 MET 54 A LEU 55 n 58 LEU 55 A PRO 56 n 59 PRO 56 A GLY 57 n 60 GLY 57 A MET 58 n 61 MET 58 A SER 59 n 62 SER 59 A GLY 60 n 63 GLY 60 A THR 61 n 64 THR 61 A ASP 62 n 65 ASP 62 A VAL 63 n 66 VAL 63 A CYS 64 n 67 CYS 64 A LYS 65 n 68 LYS 65 A GLN 66 n 69 GLN 66 A LEU 67 n 70 LEU 67 A ARG 68 n 71 ARG 68 A ALA 69 n 72 ALA 69 A ARG 70 n 73 ARG 70 A SER 71 n 74 SER 71 A SER 72 n 75 SER 72 A VAL 73 n 76 VAL 73 A PRO 74 n 77 PRO 74 A VAL 75 n 78 VAL 75 A ILE 76 n 79 ILE 76 A MET 77 n 80 MET 77 A VAL 78 n 81 VAL 78 A THR 79 n 82 THR 79 A ALA 80 n 83 ALA 80 A ARG 81 n 84 ARG 81 A ASP 82 n 85 ASP 82 A SER 83 n 86 SER 83 A GLU 84 n 87 GLU 84 A ILE 85 n 88 ILE 85 A ASP 86 n 89 ASP 86 A LYS 87 n 90 LYS 87 A VAL 88 n 91 VAL 88 A VAL 89 n 92 VAL 89 A GLY 90 n 93 GLY 90 A LEU 91 n 94 LEU 91 A GLU 92 n 95 GLU 92 A LEU 93 n 96 LEU 93 A GLY 94 n 97 GLY 94 A ALA 95 n 98 ALA 95 A ASP 96 n 99 ASP 96 A ASP 97 n 100 ASP 97 A TYR 98 n 101 TYR 98 A VAL 99 n 102 VAL 99 A THR 100 n 103 THR 100 A LYS 101 n 104 LYS 101 A PRO 102 n 105 PRO 102 A TYR 103 n 106 TYR 103 A SER 104 n 107 SER 104 A ALA 105 n 108 ALA 105 A ARG 106 n 109 ARG 106 A GLU 107 n 110 GLU 107 A LEU 108 n 111 LEU 108 A ILE 109 n 112 ILE 109 A ALA 110 n 113 ALA 110 A ARG 111 n 114 ARG 111 A ILE 112 n 115 ILE 112 A ARG 113 n 116 ARG 113 A ALA 114 n 117 ALA 114 A VAL 115 n 118 VAL 115 A LEU 116 n 119 LEU 116 A ARG 117 n 120 ARG 117 A ARG 118 n 121 ARG 118 A GLY 119 n 122 GLY 119 A GLY 120 n 123 GLY 120 A ASP 121 n 124 ASP 121 A ASP 122 n 125 ASP 122 A ASP 123 n 126 ASP 123 A SER 124 n 127 SER 124 A GLU 125 n 128 GLU 125 A MET 126 n 129 MET 126 A SER 127 n 130 SER 127 A ASP 128 n 131 ASP 128 A GLY 129 n 132 GLY 129 A VAL 130 n 133 VAL 130 A LEU 131 n 134 LEU 131 A GLU 132 n 135 GLU 132 A SER 133 n 136 SER 133 A GLY 134 n 137 GLY 134 A PRO 135 n 138 PRO 135 A VAL 136 n 139 VAL 136 A ARG 137 n 140 ARG 137 A MET 138 n 141 MET 138 A ASP 139 n 142 ASP 139 A VAL 140 n 143 VAL 140 A GLU 141 n 144 GLU 141 A ARG 142 n 145 ARG 142 A HIS 143 n 146 HIS 143 A VAL 144 n 147 VAL 144 A VAL 145 n 148 VAL 145 A SER 146 n 149 SER 146 A VAL 147 n 150 VAL 147 A ASN 148 n 151 ASN 148 A GLY 149 n 152 GLY 149 A ASP 150 n 153 ASP 150 A THR 151 n 154 THR 151 A ILE 152 n 155 ILE 152 A THR 153 n 156 THR 153 A LEU 154 n 157 LEU 154 A PRO 155 n 158 PRO 155 A LEU 156 n 159 LEU 156 A LYS 157 n 160 LYS 157 A GLU 158 n 161 GLU 158 A PHE 159 n 162 PHE 159 A ASP 160 n 163 ASP 160 A LEU 161 n 164 LEU 161 A LEU 162 n 165 LEU 162 A GLU 163 n 166 GLU 163 A TYR 164 n 167 TYR 164 A LEU 165 n 168 LEU 165 A MET 166 n 169 MET 166 A ARG 167 n 170 ARG 167 A ASN 168 n 171 ASN 168 A SER 169 n 172 SER 169 A GLY 170 n 173 GLY 170 A ARG 171 n 174 ARG 171 A VAL 172 n 175 VAL 172 A LEU 173 n 176 LEU 173 A THR 174 n 177 THR 174 A ARG 175 n 178 ARG 175 A GLY 176 n 179 GLY 176 A GLN 177 n 180 GLN 177 A LEU 178 n 181 LEU 178 A ILE 179 n 182 ILE 179 A ASP 180 n 183 ASP 180 A ARG 181 n 184 ARG 181 A VAL 182 n 185 VAL 182 A TRP 183 n 186 TRP 183 A GLY 184 n 187 GLY 184 A ALA 185 n 188 ALA 185 A ASP 186 n 189 ASP 186 A TYR 187 n 190 TYR 187 A VAL 188 n 191 VAL 188 A GLY 189 n 192 GLY 189 A ASP 190 n 193 ASP 190 A THR 191 n 194 THR 191 A LYS 192 n 195 LYS 192 A THR 193 n 196 THR 193 A LEU 194 n 197 LEU 194 A ASP 195 n 198 ASP 195 A VAL 196 n 199 VAL 196 A HIS 197 n 200 HIS 197 A VAL 198 n 201 VAL 198 A LYS 199 n 202 LYS 199 A ARG 200 n 203 ARG 200 A LEU 201 n 204 LEU 201 A ARG 202 n 205 ARG 202 A SER 203 n 206 SER 203 A LYS 204 n 207 LYS 204 A ILE 205 n 208 ILE 205 A GLU 206 n 209 GLU 206 A ALA 207 n 210 ALA 207 A ASP 208 n 211 ASP 208 A PRO 209 n 212 PRO 209 A ALA 210 n 213 ALA 210 A ASN 211 n 214 ASN 211 A PRO 212 n 215 PRO 212 A VAL 213 n 216 VAL 213 A HIS 214 n 217 HIS 214 A LEU 215 n 218 LEU 215 A VAL 216 n 219 VAL 216 A THR 217 n 220 THR 217 A VAL 218 n 221 VAL 218 A ARG 219 n 222 ARG 219 A GLY 220 n 223 GLY 220 A LEU 221 n 224 LEU 221 A GLY 222 n 225 GLY 222 A TYR 223 n 226 TYR 223 A LYS 224 n 227 LYS 224 A LEU 225 n 228 LEU 225 A GLU 226 n 229 GLU 226 A n 230 227 A 2.1180 1.8843 0.0215 2.3943 -0.4309 1.5414 0.1184 -0.2230 -0.2580 0.1870 -0.1115 -0.2729 0.1384 0.0244 -0.0069 -0.1574 -0.0158 -0.0080 -0.1582 0.0109 -0.2214 refined 30.3320 -45.4840 5.2280 X-RAY DIFFRACTION 2.7184 -1.3853 1.7207 4.4049 -0.6038 7.9870 -0.0873 -0.5366 -0.3085 0.5978 0.2083 0.6891 -0.2211 -0.3437 -0.1210 0.0422 -0.0405 0.1045 -0.1771 0.0996 -0.2104 refined 39.4320 -13.8110 17.4470 X-RAY DIFFRACTION 2.4363 -0.8496 -0.0533 5.8518 -0.6006 3.6483 -0.0648 -0.2071 0.0110 0.6582 0.2558 0.9124 -0.2609 -0.2897 -0.1910 -0.0386 0.0066 0.1205 -0.2032 0.0778 -0.0878 refined 33.6890 -2.3810 10.4800 X-RAY DIFFRACTION A 1 A 4 A 107 A 110 X-RAY DIFFRACTION 1 ALL A 108 A 111 A 171 A 174 X-RAY DIFFRACTION 2 ALL A 172 A 175 A 226 A 229 X-RAY DIFFRACTION 3 ALL author_and_software_defined_assembly PISA,PQS 2 dimeric 8290 -113 21140 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_555 -y,-x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O THR 29 A O THR 32 A N ILE 6 A N ILE 9 A N VAL 7 A N VAL 10 A O LEU 50 A O LEU 53 A N VAL 49 A N VAL 52 A O VAL 75 A O VAL 78 A N LEU 131 A N LEU 134 A O MET 138 A O MET 141 A N ASP 139 A N ASP 142 A O VAL 144 A O VAL 147 A N THR 151 A N THR 154 A N GLY 149 A N GLY 152 A N LEU 173 A N LEU 176 A O TYR 223 A O TYR 226 A O GLY 222 A O GLY 225 A N VAL 218 A N VAL 221 1 A GLY -2 A GLY 1 1 Y 1 A ALA -1 A ALA 2 1 Y 1 A MET 0 A MET 3 1 Y 1 A GLY 227 A GLY 230 1 Y 1 A A O O HOH HOH 549 550 1.88 1 A A O O HOH HOH 463 464 2.16 1 A A O O HOH HOH 457 458 2.17 1 A A O O HOH HOH 463 465 2.17 1 A A O O HOH HOH 421 422 2.19 1 A A LYS PRO 101 102 -50.25 1 A A THR LEU 153 154 146.52 1 6.54 0.90 118.30 124.84 A A A CB CG OD1 ASP ASP ASP 86 86 86 N 1 A A OE2 LA GLU LA 141 304 1.84 1_555 8_556 1 A PRO 102 -30.37 130.78 1 A ASN 148 68.35 -73.97 1 A ILE 152 -53.19 -155.14 1 A ALA 210 -165.61 -51.10 1 A LEU 221 -123.18 -70.11 40.019 -0.030 0.000 0.000 -0.030 0.000 0.070 0.968 0.948 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.217 0.177 0.179 0.179 2.030 19.970 1188 23225 21964 5.100 99.870 5.159 0.099 RANDOM 1 THROUGHOUT 0.00 0.00 SAD 0.134 0.133 0.800 0.800 1.400 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.030 19.970 163 1914 17 0 1734 0.016 0.022 1797 0.008 0.020 1216 1.548 2.001 2402 1.069 3.000 2958 10.934 5.000 227 37.649 23.117 77 17.145 15.000 316 19.926 15.000 20 0.090 0.200 285 0.006 0.020 1975 0.001 0.020 348 0.243 0.200 358 0.199 0.200 1268 0.175 0.200 864 0.088 0.200 1014 0.175 0.200 127 0.171 0.200 2 0.299 0.200 25 0.265 0.200 53 0.177 0.200 11 0.354 0.200 3 1.000 1.500 1175 0.174 1.500 461 1.557 2.500 1820 4.168 5.000 678 6.355 10.000 581 0.306 0.252 2.085 86 1543 1629 20 98.430 42 2.030 19.97 2OQR 23225 23179 -3.0 -3.0 0.076 0.076 1.404 1 32 12.100 99.900 0.664 2.03 2.06 4 1112 0.664 1.660 1 8.50 97.70 data reduction Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm DENZO package data scaling Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm SCALEPACK package refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran_77 http://www.ccp4.ac.uk/main.html REFMAC program 5.2.0019 data extraction PDB sw-help@rcsb.rutgers.edu April. 3, 2006 C++ http://pdb.rutgers.edu/software/ PDB_EXTRACT package 2.000 phasing Auto-Rickshaw The structure of the response regulator RegX3 from Mycobacterium tuberculosis 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N 3 N N 4 N N 5 N N The biological dimer is generated from the monomer in the asymmetric unit by the operation: -x+1/2, y+1/2, -z. A GLU 10 A GLU 13 HELX_P A GLU 24 A GLU 27 1 1 15 A ASP 33 A ASP 36 HELX_P A GLY 45 A GLY 48 1 2 13 A SER 59 A SER 62 HELX_P A SER 71 A SER 74 1 3 13 A ARG 81 A ARG 84 HELX_P A GLY 94 A GLY 97 1 4 14 A SER 104 A SER 107 HELX_P A ARG 117 A ARG 120 1 5 14 A PRO 155 A PRO 158 HELX_P A ASN 168 A ASN 171 1 6 14 A ARG 175 A ARG 178 HELX_P A TRP 183 A TRP 186 1 7 9 A GLY 189 A GLY 192 HELX_P A GLU 206 A GLU 209 1 8 18 TRANSCRIPTION,SIGNALING PROTEIN response regulator, winged-helix-turn-helix, dna-binding, 3D domain swapping, RegX3, two component system, TRANSCRIPTION, SIGNALING PROTEIN REGX3_MYCTU UNP 1 2 Q11156 TSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTAR DSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDL LEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLEG 2 227 2OQR 2 227 Q11156 A 1 5 230 1 expression tag GLY -2 2OQR A Q11156 UNP 1 1 expression tag ALA -1 2OQR A Q11156 UNP 2 1 expression tag MET 0 2OQR A Q11156 UNP 3 1 expression tag ALA 1 2OQR A Q11156 UNP 4 4 4 3 parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 27 A GLU 30 A VAL 31 A VAL 34 A SER 3 A SER 6 A VAL 7 A VAL 10 A ILE 48 A ILE 51 A ASP 52 A ASP 55 A VAL 75 A VAL 78 A THR 79 A THR 82 A LEU 131 A LEU 134 A SER 133 A SER 136 A VAL 136 A VAL 139 A ASP 139 A ASP 142 A VAL 144 A VAL 147 A VAL 147 A VAL 150 A GLY 149 A GLY 152 A THR 151 A THR 154 A LEU 173 A LEU 176 A THR 174 A THR 177 A GLY 222 A GLY 225 A LEU 225 A LEU 228 A LEU 215 A LEU 218 A VAL 218 A VAL 221 BINDING SITE FOR RESIDUE ACT A 228 A ACT 228 Software 4 BINDING SITE FOR RESIDUE ACT A 229 A ACT 229 Software 3 BINDING SITE FOR RESIDUE LA A 301 A LA 301 Software 8 BINDING SITE FOR RESIDUE LA A 302 A LA 302 Software 8 BINDING SITE FOR RESIDUE LA A 303 A LA 303 Software 8 BINDING SITE FOR RESIDUE LA A 304 A LA 304 Software 8 BINDING SITE FOR RESIDUE LA A 305 A LA 305 Software 7 BINDING SITE FOR RESIDUE BME A 401 A BME 401 Software 3 A MET 77 A MET 80 4 8_555 A ARG 111 A ARG 114 4 1_555 A VAL 115 A VAL 118 4 1_555 A HOH 459 J HOH 4 1_555 A TYR 164 A TYR 167 3 1_555 A HOH 531 J HOH 3 1_555 A HOH 537 J HOH 3 1_555 A ASP 86 A ASP 89 8 1_555 A ASP 97 A ASP 100 8 1_555 A TYR 98 A TYR 101 8 1_555 A HOH 460 J HOH 8 1_555 A HOH 462 J HOH 8 1_555 A HOH 463 J HOH 8 1_555 A HOH 465 J HOH 8 1_555 A HOH 466 J HOH 8 1_555 A GLU 24 A GLU 27 8 8_555 A ASP 180 A ASP 183 8 1_555 A ASP 186 A ASP 189 8 1_555 A HOH 548 J HOH 8 1_555 A HOH 549 J HOH 8 1_555 A HOH 550 J HOH 8 1_555 A HOH 551 J HOH 8 1_555 A HOH 552 J HOH 8 1_555 A GLU 11 A GLU 14 8 1_555 A ASP 15 A ASP 18 8 1_555 A ASP 122 A ASP 125 8 8_556 A ASP 123 A ASP 126 8 8_556 A ASP 128 A ASP 131 8 8_556 A HOH 432 J HOH 8 1_555 A HOH 433 J HOH 8 1_555 A HOH 439 J HOH 8 1_555 A GLU 11 A GLU 14 8 1_555 A ASP 121 A ASP 124 8 8_556 A ASP 122 A ASP 125 8 8_556 A ASP 123 A ASP 126 8 8_556 A GLU 141 A GLU 144 8 8_556 A HOH 434 J HOH 8 1_555 A HOH 435 J HOH 8 1_555 A HOH 509 J HOH 8 8_556 A ASP 9 A ASP 12 7 1_555 A ASP 52 A ASP 55 7 1_555 A MET 54 A MET 57 7 1_555 A GLU 84 A GLU 87 7 1_555 A HOH 420 J HOH 7 1_555 A HOH 421 J HOH 7 1_555 A HOH 422 J HOH 7 1_555 A TYR 103 A TYR 106 3 1_555 A HOH 423 J HOH 3 8_555 A HOH 471 J HOH 3 1_555 90 P 4 21 2