0.035039
0.000000
0.003442
0.000000
0.017892
0.000000
0.000000
0.000000
0.036996
0.00000
0.00000
0.00000
Carrell, C.J.
Davidson, V.L.
Chen, Z.
Cunane, L.M.
Trickey, P.
Mathews, F.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
95.61
90.00
28.540
55.890
27.160
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cu 2
63.546
COPPER (II) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CU
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
NA
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
Y
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
P
N
276
N
O
N
277
N
O
N
278
N
O
N
279
N
O
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
N
285
N
C
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
N
302
N
O
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
N
N
312
S
C
N
313
N
C
N
314
N
O
N
315
R
C
N
316
N
O
N
317
N
C
N
318
N
O
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
N
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
N
366
N
O
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
N
384
N
C
N
385
N
C
N
386
N
O
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
Y
326
N
sing
Y
327
N
sing
N
328
N
sing
Y
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
TO BE PUBLISHED
0353
Ultrahigh resolution studies of amicyanin
10.2210/pdb2ov0/pdb
pdb_00002ov0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
100
1
CCD
1999-03-07
CUSTOM-MADE
SINGLE WAVELENGTH
M
x-ray
1
0.65260
1.0
19-ID
APS
0.65260
SYNCHROTRON
APS BEAMLINE 19-ID
11505.171
Amicyanin
1
man
polymer
63.546
COPPER (II) ION
1
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
22.990
SODIUM ION
1
syn
non-polymer
18.015
water
216
nat
water
no
no
DKATIPSESPFAAAEVADGAIVVDIAKMKYETPELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPMMKKEQAYSL
TFTEAGTYDYHCTPHPFMRGKVVVE
DKATIPSESPFAAAEVADGAIVVDIAKMKYETPELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPMMKKEQAYSL
TFTEAGTYDYHCTPHPFMRGKVVVE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Paracoccus
Escherichia
sample
mauC, ami
266
Paracoccus denitrificans
562
Escherichia coli
1
1.87
34.31
EVAPORATION
5.5
3 M sodium phosphate, pH 5.5, EVAPORATION, temperature 293K
293
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2007-08-14
1
1
2011-07-13
1
2
2017-10-18
1
3
2023-08-30
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2007-02-12
REL
REL
CU
COPPER (II) ION
PO4
PHOSPHATE ION
NA
SODIUM ION
HOH
water
1AAC
PDB Entry 1AAC
PDB
experimental model
CU
307
2
CU
CU
307
A
PO4
311
3
PO4
PO4
311
A
NA
312
4
NA
NA
312
A
HOH
1
5
HOH
HOH
313
A
HOH
2
5
HOH
HOH
314
A
HOH
3
5
HOH
HOH
315
A
HOH
4
5
HOH
HOH
316
A
HOH
5
5
HOH
HOH
317
A
HOH
6
5
HOH
HOH
318
A
HOH
7
5
HOH
HOH
319
A
HOH
8
5
HOH
HOH
320
A
HOH
9
5
HOH
HOH
321
A
HOH
10
5
HOH
HOH
322
A
HOH
11
5
HOH
HOH
323
A
HOH
12
5
HOH
HOH
324
A
HOH
13
5
HOH
HOH
325
A
HOH
14
5
HOH
HOH
326
A
HOH
15
5
HOH
HOH
327
A
HOH
16
5
HOH
HOH
328
A
HOH
17
5
HOH
HOH
329
A
HOH
18
5
HOH
HOH
330
A
HOH
19
5
HOH
HOH
331
A
HOH
20
5
HOH
HOH
332
A
HOH
21
5
HOH
HOH
333
A
HOH
22
5
HOH
HOH
334
A
HOH
23
5
HOH
HOH
335
A
HOH
24
5
HOH
HOH
336
A
HOH
25
5
HOH
HOH
337
A
HOH
26
5
HOH
HOH
338
A
HOH
27
5
HOH
HOH
339
A
HOH
28
5
HOH
HOH
340
A
HOH
29
5
HOH
HOH
341
A
HOH
30
5
HOH
HOH
342
A
HOH
31
5
HOH
HOH
343
A
HOH
32
5
HOH
HOH
344
A
HOH
33
5
HOH
HOH
345
A
HOH
34
5
HOH
HOH
346
A
HOH
35
5
HOH
HOH
347
A
HOH
36
5
HOH
HOH
348
A
HOH
37
5
HOH
HOH
349
A
HOH
38
5
HOH
HOH
350
A
HOH
39
5
HOH
HOH
351
A
HOH
40
5
HOH
HOH
352
A
HOH
41
5
HOH
HOH
353
A
HOH
42
5
HOH
HOH
354
A
HOH
43
5
HOH
HOH
355
A
HOH
44
5
HOH
HOH
356
A
HOH
45
5
HOH
HOH
357
A
HOH
46
5
HOH
HOH
358
A
HOH
47
5
HOH
HOH
359
A
HOH
48
5
HOH
HOH
360
A
HOH
49
5
HOH
HOH
361
A
HOH
50
5
HOH
HOH
362
A
HOH
51
5
HOH
HOH
363
A
HOH
52
5
HOH
HOH
364
A
HOH
53
5
HOH
HOH
365
A
HOH
54
5
HOH
HOH
366
A
HOH
55
5
HOH
HOH
367
A
HOH
56
5
HOH
HOH
368
A
HOH
57
5
HOH
HOH
369
A
HOH
58
5
HOH
HOH
370
A
HOH
59
5
HOH
HOH
371
A
HOH
60
5
HOH
HOH
372
A
HOH
61
5
HOH
HOH
373
A
HOH
62
5
HOH
HOH
374
A
HOH
63
5
HOH
HOH
375
A
HOH
64
5
HOH
HOH
376
A
HOH
65
5
HOH
HOH
377
A
HOH
66
5
HOH
HOH
378
A
HOH
67
5
HOH
HOH
379
A
HOH
68
5
HOH
HOH
380
A
HOH
69
5
HOH
HOH
381
A
HOH
70
5
HOH
HOH
382
A
HOH
71
5
HOH
HOH
383
A
HOH
72
5
HOH
HOH
384
A
HOH
73
5
HOH
HOH
385
A
HOH
74
5
HOH
HOH
386
A
HOH
75
5
HOH
HOH
387
A
HOH
76
5
HOH
HOH
388
A
HOH
77
5
HOH
HOH
389
A
HOH
78
5
HOH
HOH
390
A
HOH
79
5
HOH
HOH
391
A
HOH
80
5
HOH
HOH
392
A
HOH
81
5
HOH
HOH
393
A
HOH
82
5
HOH
HOH
394
A
HOH
83
5
HOH
HOH
395
A
HOH
84
5
HOH
HOH
396
A
HOH
85
5
HOH
HOH
397
A
HOH
86
5
HOH
HOH
398
A
HOH
87
5
HOH
HOH
399
A
HOH
88
5
HOH
HOH
400
A
HOH
89
5
HOH
HOH
401
A
HOH
90
5
HOH
HOH
402
A
HOH
91
5
HOH
HOH
403
A
HOH
92
5
HOH
HOH
404
A
HOH
93
5
HOH
HOH
405
A
HOH
94
5
HOH
HOH
406
A
HOH
95
5
HOH
HOH
407
A
HOH
96
5
HOH
HOH
408
A
HOH
97
5
HOH
HOH
409
A
HOH
98
5
HOH
HOH
410
A
HOH
99
5
HOH
HOH
411
A
HOH
100
5
HOH
HOH
412
A
HOH
101
5
HOH
HOH
413
A
HOH
102
5
HOH
HOH
414
A
HOH
103
5
HOH
HOH
415
A
HOH
104
5
HOH
HOH
416
A
HOH
105
5
HOH
HOH
417
A
HOH
106
5
HOH
HOH
418
A
HOH
107
5
HOH
HOH
419
A
HOH
108
5
HOH
HOH
420
A
HOH
109
5
HOH
HOH
421
A
HOH
110
5
HOH
HOH
422
A
HOH
111
5
HOH
HOH
423
A
HOH
112
5
HOH
HOH
424
A
HOH
113
5
HOH
HOH
425
A
HOH
114
5
HOH
HOH
426
A
HOH
115
5
HOH
HOH
427
A
HOH
116
5
HOH
HOH
428
A
HOH
117
5
HOH
HOH
429
A
HOH
118
5
HOH
HOH
430
A
HOH
119
5
HOH
HOH
431
A
HOH
120
5
HOH
HOH
432
A
HOH
121
5
HOH
HOH
433
A
HOH
122
5
HOH
HOH
434
A
HOH
123
5
HOH
HOH
435
A
HOH
124
5
HOH
HOH
436
A
HOH
125
5
HOH
HOH
437
A
HOH
126
5
HOH
HOH
438
A
HOH
127
5
HOH
HOH
439
A
HOH
128
5
HOH
HOH
440
A
HOH
129
5
HOH
HOH
441
A
HOH
130
5
HOH
HOH
442
A
HOH
131
5
HOH
HOH
443
A
HOH
132
5
HOH
HOH
444
A
HOH
133
5
HOH
HOH
445
A
HOH
134
5
HOH
HOH
446
A
HOH
135
5
HOH
HOH
447
A
HOH
136
5
HOH
HOH
448
A
HOH
137
5
HOH
HOH
449
A
HOH
138
5
HOH
HOH
450
A
HOH
139
5
HOH
HOH
451
A
HOH
140
5
HOH
HOH
452
A
HOH
141
5
HOH
HOH
453
A
HOH
142
5
HOH
HOH
454
A
HOH
143
5
HOH
HOH
455
A
HOH
144
5
HOH
HOH
456
A
HOH
145
5
HOH
HOH
457
A
HOH
146
5
HOH
HOH
458
A
HOH
147
5
HOH
HOH
459
A
HOH
148
5
HOH
HOH
460
A
HOH
149
5
HOH
HOH
461
A
HOH
150
5
HOH
HOH
462
A
HOH
151
5
HOH
HOH
463
A
HOH
152
5
HOH
HOH
464
A
HOH
153
5
HOH
HOH
465
A
HOH
154
5
HOH
HOH
466
A
HOH
155
5
HOH
HOH
467
A
HOH
156
5
HOH
HOH
468
A
HOH
157
5
HOH
HOH
469
A
HOH
158
5
HOH
HOH
470
A
HOH
159
5
HOH
HOH
471
A
HOH
160
5
HOH
HOH
472
A
HOH
161
5
HOH
HOH
473
A
HOH
162
5
HOH
HOH
474
A
HOH
163
5
HOH
HOH
475
A
HOH
164
5
HOH
HOH
476
A
HOH
165
5
HOH
HOH
477
A
HOH
166
5
HOH
HOH
478
A
HOH
167
5
HOH
HOH
479
A
HOH
168
5
HOH
HOH
480
A
HOH
169
5
HOH
HOH
481
A
HOH
170
5
HOH
HOH
482
A
HOH
171
5
HOH
HOH
483
A
HOH
172
5
HOH
HOH
484
A
HOH
173
5
HOH
HOH
485
A
HOH
174
5
HOH
HOH
486
A
HOH
175
5
HOH
HOH
487
A
HOH
176
5
HOH
HOH
488
A
HOH
177
5
HOH
HOH
489
A
HOH
178
5
HOH
HOH
490
A
HOH
179
5
HOH
HOH
491
A
HOH
180
5
HOH
HOH
492
A
HOH
181
5
HOH
HOH
493
A
HOH
182
5
HOH
HOH
494
A
HOH
183
5
HOH
HOH
495
A
HOH
184
5
HOH
HOH
496
A
HOH
185
5
HOH
HOH
497
A
HOH
186
5
HOH
HOH
498
A
HOH
187
5
HOH
HOH
499
A
HOH
188
5
HOH
HOH
500
A
HOH
189
5
HOH
HOH
501
A
HOH
190
5
HOH
HOH
502
A
HOH
191
5
HOH
HOH
503
A
HOH
192
5
HOH
HOH
504
A
HOH
193
5
HOH
HOH
505
A
HOH
194
5
HOH
HOH
506
A
HOH
195
5
HOH
HOH
507
A
HOH
196
5
HOH
HOH
508
A
HOH
197
5
HOH
HOH
509
A
HOH
198
5
HOH
HOH
510
A
HOH
199
5
HOH
HOH
511
A
HOH
200
5
HOH
HOH
512
A
HOH
201
5
HOH
HOH
513
A
HOH
202
5
HOH
HOH
514
A
HOH
203
5
HOH
HOH
515
A
HOH
204
5
HOH
HOH
516
A
HOH
205
5
HOH
HOH
517
A
HOH
206
5
HOH
HOH
518
A
HOH
207
5
HOH
HOH
519
A
HOH
208
5
HOH
HOH
520
A
HOH
209
5
HOH
HOH
521
A
HOH
210
5
HOH
HOH
522
A
HOH
211
5
HOH
HOH
523
A
HOH
212
5
HOH
HOH
524
A
HOH
213
5
HOH
HOH
525
A
HOH
214
5
HOH
HOH
526
A
HOH
215
5
HOH
HOH
527
A
HOH
216
5
HOH
HOH
528
A
ASP
1
n
1
ASP
1
A
LYS
2
n
2
LYS
2
A
ALA
3
n
3
ALA
3
A
THR
4
n
4
THR
4
A
ILE
5
n
5
ILE
5
A
PRO
6
n
6
PRO
6
A
SER
7
n
7
SER
7
A
GLU
8
n
8
GLU
8
A
SER
9
n
9
SER
9
A
PRO
10
n
10
PRO
10
A
PHE
11
n
11
PHE
11
A
ALA
12
n
12
ALA
12
A
ALA
13
n
13
ALA
13
A
ALA
14
n
14
ALA
14
A
GLU
15
n
15
GLU
15
A
VAL
16
n
16
VAL
16
A
ALA
17
n
17
ALA
17
A
ASP
18
n
18
ASP
18
A
GLY
19
n
19
GLY
19
A
ALA
20
n
20
ALA
20
A
ILE
21
n
21
ILE
21
A
VAL
22
n
22
VAL
22
A
VAL
23
n
23
VAL
23
A
ASP
24
n
24
ASP
24
A
ILE
25
n
25
ILE
25
A
ALA
26
n
26
ALA
26
A
LYS
27
n
27
LYS
27
A
MET
28
n
28
MET
28
A
LYS
29
n
29
LYS
29
A
TYR
30
n
30
TYR
30
A
GLU
31
n
31
GLU
31
A
THR
32
n
32
THR
32
A
PRO
33
n
33
PRO
33
A
GLU
34
n
34
GLU
34
A
LEU
35
n
35
LEU
35
A
HIS
36
n
36
HIS
36
A
VAL
37
n
37
VAL
37
A
LYS
38
n
38
LYS
38
A
VAL
39
n
39
VAL
39
A
GLY
40
n
40
GLY
40
A
ASP
41
n
41
ASP
41
A
THR
42
n
42
THR
42
A
VAL
43
n
43
VAL
43
A
THR
44
n
44
THR
44
A
TRP
45
n
45
TRP
45
A
ILE
46
n
46
ILE
46
A
ASN
47
n
47
ASN
47
A
ARG
48
n
48
ARG
48
A
GLU
49
n
49
GLU
49
A
ALA
50
n
50
ALA
50
A
MET
51
n
51
MET
51
A
PRO
52
n
52
PRO
52
A
HIS
53
n
53
HIS
53
A
ASN
54
n
54
ASN
54
A
VAL
55
n
55
VAL
55
A
HIS
56
n
56
HIS
56
A
PHE
57
n
57
PHE
57
A
VAL
58
n
58
VAL
58
A
ALA
59
n
59
ALA
59
A
GLY
60
n
60
GLY
60
A
VAL
61
n
61
VAL
61
A
LEU
62
n
62
LEU
62
A
GLY
63
n
63
GLY
63
A
GLU
64
n
64
GLU
64
A
ALA
65
n
65
ALA
65
A
ALA
66
n
66
ALA
66
A
LEU
67
n
67
LEU
67
A
LYS
68
n
68
LYS
68
A
GLY
69
n
69
GLY
69
A
PRO
70
n
70
PRO
70
A
MET
71
n
71
MET
71
A
MET
72
n
72
MET
72
A
LYS
73
n
73
LYS
73
A
LYS
74
n
74
LYS
74
A
GLU
75
n
75
GLU
75
A
GLN
76
n
76
GLN
76
A
ALA
77
n
77
ALA
77
A
TYR
78
n
78
TYR
78
A
SER
79
n
79
SER
79
A
LEU
80
n
80
LEU
80
A
THR
81
n
81
THR
81
A
PHE
82
n
82
PHE
82
A
THR
83
n
83
THR
83
A
GLU
84
n
84
GLU
84
A
ALA
85
n
85
ALA
85
A
GLY
86
n
86
GLY
86
A
THR
87
n
87
THR
87
A
TYR
88
n
88
TYR
88
A
ASP
89
n
89
ASP
89
A
TYR
90
n
90
TYR
90
A
HIS
91
n
91
HIS
91
A
CYS
92
n
92
CYS
92
A
THR
93
n
93
THR
93
A
PRO
94
n
94
PRO
94
A
HIS
95
n
95
HIS
95
A
PRO
96
n
96
PRO
96
A
PHE
97
n
97
PHE
97
A
MET
98
n
98
MET
98
A
ARG
99
n
99
ARG
99
A
GLY
100
n
100
GLY
100
A
LYS
101
n
101
LYS
101
A
VAL
102
n
102
VAL
102
A
VAL
103
n
103
VAL
103
A
VAL
104
n
104
VAL
104
A
GLU
105
n
105
GLU
105
A
0.1172
0.1263
0.116
0.1251
0.1336
0.1418
6760
8437
8.0
8.0
84344
author_defined_assembly
1
monomeric
A
HIS
53
A
ND1
HIS
53
1_555
A
CU
307
B
CU
CU
1_555
A
CYS
92
A
SG
CYS
92
1_555
138.1
A
HIS
53
A
ND1
HIS
53
1_555
A
CU
307
B
CU
CU
1_555
A
HIS
95
A
ND1
HIS
95
1_555
104.4
A
CYS
92
A
SG
CYS
92
1_555
A
CU
307
B
CU
CU
1_555
A
HIS
95
A
ND1
HIS
95
1_555
114.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
4
A
N
THR
4
A
O
THR
81
A
O
THR
81
A
O
ALA
77
A
O
ALA
77
A
N
PHE
11
A
N
PHE
11
A
N
THR
4
A
N
THR
4
A
O
THR
81
A
O
THR
81
A
O
LEU
80
A
O
LEU
80
A
N
VAL
43
A
N
VAL
43
A
O
THR
42
A
O
THR
42
A
N
ILE
21
A
N
ILE
21
A
N
ALA
26
A
N
ALA
26
A
O
LYS
29
A
O
LYS
29
A
N
LEU
35
A
N
LEU
35
A
O
VAL
103
A
O
VAL
103
A
O
VAL
104
A
O
VAL
104
A
N
GLY
86
A
N
GLY
86
A
N
PHE
57
A
N
PHE
57
A
O
LEU
67
A
O
LEU
67
1
-6.42
0.90
118.30
111.88
A
A
A
CB
CG
OD2
ASP
ASP
ASP
41
41
41
A
A
N
1
-16.49
1.20
123.30
106.81
A
A
A
OE1
CD
OE2
GLU
GLU
GLU
49
49
49
N
1
A
A
CD
OE1
GLU
GLU
49
49
-0.080
0.011
1.252
1.172
N
1
A
A
CD
OE2
GLU
GLU
49
49
-0.084
0.011
1.252
1.168
N
ANISOTROPIC REFINEMENT REDUCED FREE R (NO CUTOFF) BY ?
0.1418
0.1251
0.1263
0.1251
0.75
20.00
9489
8437
105709
105709
11191
8.0
RANDOM
1
FREE R
0.0
AB INITIO
PDB Entry 1AAC
ENGH AND HUBER
18
794.00
1022.00
0.75
20.00
216
1053
7
0
830
0.016
4.0
0.750
20.000
2OV0
105738
105738
0
0
0.05
0.942
1
9.000
97.800
0.351
0.75
0.76
4999
0.525
93.50
0.35
0.76
0.78
5027
0.727
92.80
0.282
0.78
0.79
5103
0.584
94.90
0.237
0.79
0.81
5061
0.574
94.40
0.209
0.81
0.83
5165
0.628
95.20
0.182
0.83
0.84
5134
0.716
95.90
0.155
0.84
0.87
5201
0.790
96.10
0.132
0.87
0.89
5238
0.857
97.30
0.105
0.89
0.92
5348
0.913
98.90
0.089
0.92
0.94
5341
0.973
99.60
0.077
0.94
0.98
5429
0.958
99.80
0.067
0.98
1.02
5397
0.844
99.90
0.062
1.02
1.06
5367
0.954
99.80
0.057
1.06
1.12
5380
1.030
99.60
0.051
1.12
1.19
5400
1.520
99.70
0.114
1.19
1.28
5401
0.979
100.00
0.102
1.28
1.41
5409
0.982
100.00
0.081
1.41
1.62
5426
1.101
100.00
0.057
1.62
2.04
5442
1.090
99.80
0.021
2.04
20.00
5470
1.158
99.40
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
refinement
George Sheldrick
gsheldr@shelx.uni-ac.gwdg.de
Fortran_77
http://shelx.uni-ac.gwdg.de/SHELX/
SHELX
package
data extraction
PDB
sw-help@rcsb.rutgers.edu
April. 3, 2006
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
package
2.000
phasing
SHELX
refinement
SHELXL-97
Y
Structure of the blue copper protein Amicyanin to 0.75 A resolution
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
ALA
14
A
ALA
14
HELX_P
A
VAL
16
A
VAL
16
5
1
3
metalc
1.985
A
HIS
53
A
ND1
HIS
53
1_555
A
CU
307
B
CU
CU
1_555
metalc
2.168
A
CYS
92
A
SG
CYS
92
1_555
A
CU
307
B
CU
CU
1_555
metalc
2.045
A
HIS
95
A
ND1
HIS
95
1_555
A
CU
307
B
CU
CU
1_555
metalc
2.485
A
NA
312
D
NA
NA
1_555
A
HOH
411
E
O
HOH
1_555
ELECTRON TRANSPORT
beta-sandwich, ELECTRON TRANSPORT
AMCY_PARDE
UNP
1
27
P22364
DKATIPSESPFAAAEVADGAIVVDIAKMKYETPELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGPMMKKEQAYSL
TFTEAGTYDYHCTPHPFMRGKVVVE
27
131
2OV0
1
105
P22364
A
1
1
105
3
5
3
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
ALA
3
A
ALA
3
A
THR
4
A
THR
4
A
GLN
76
A
GLN
76
A
PHE
82
A
PHE
82
A
PHE
11
A
PHE
11
A
ALA
12
A
ALA
12
A
ALA
3
A
ALA
3
A
THR
4
A
THR
4
A
GLN
76
A
GLN
76
A
PHE
82
A
PHE
82
A
THR
42
A
THR
42
A
ASN
47
A
ASN
47
A
ILE
21
A
ILE
21
A
ALA
26
A
ALA
26
A
LYS
29
A
LYS
29
A
TYR
30
A
TYR
30
A
GLU
34
A
GLU
34
A
VAL
37
A
VAL
37
A
ARG
99
A
ARG
99
A
VAL
104
A
VAL
104
A
GLY
86
A
GLY
86
A
HIS
91
A
HIS
91
A
HIS
56
A
HIS
56
A
PHE
57
A
PHE
57
A
LEU
67
A
LEU
67
A
LYS
68
A
LYS
68
BINDING SITE FOR RESIDUE CU A 307
A
CU
307
Software
4
BINDING SITE FOR RESIDUE PO4 A 311
A
PO4
311
Software
9
BINDING SITE FOR RESIDUE NA A 312
A
NA
312
Software
5
A
HIS
53
A
HIS
53
4
1_555
A
CYS
92
A
CYS
92
4
1_555
A
HIS
95
A
HIS
95
4
1_555
A
MET
98
A
MET
98
4
1_555
A
PRO
6
A
PRO
6
9
1_555
A
THR
81
A
THR
81
9
1_555
A
ARG
99
A
ARG
99
9
1_655
A
HOH
358
E
HOH
9
1_555
A
HOH
362
E
HOH
9
1_555
A
HOH
383
E
HOH
9
1_555
A
HOH
475
E
HOH
9
1_655
A
HOH
494
E
HOH
9
1_555
A
HOH
528
E
HOH
9
1_555
A
LYS
27
A
LYS
27
5
1_555
A
MET
28
A
MET
28
5
1_555
A
GLU
49
A
GLU
49
5
1_555
A
HOH
411
E
HOH
5
1_555
A
HOH
452
E
HOH
5
1_455
4
P 1 21 1