0.020882 0.000000 0.000000 0.000000 0.020882 0.000000 0.000000 0.000000 0.007696 0.00000 0.00000 0.00000 Blanchard, H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 47.887 47.887 129.932 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C12 H21 N O9 323.296 n 2-O-methyl-5-N-acetyl-alpha-D-neuraminic acid 2-O-METHYL-5-N-ACETYL-ALPHA-D- NEURAMINIC ACID D-saccharide C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N C N 138 N O N 139 N C N 140 N O N 141 N C N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 S C N 153 N C N 154 N O N 155 N C Y 156 N C Y 157 N N Y 158 N C Y 159 N C Y 160 N N N 161 N O N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N O N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 S C N 180 N C N 181 N C N 182 N C N 183 N O N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 S C N 199 N C N 200 N O N 201 N C N 202 N C N 203 N C N 204 N C N 205 N O N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 N C N 224 N C N 225 N C N 226 N C N 227 N N N 228 N O N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N N N 245 S C N 246 N C N 247 N O N 248 N C N 249 N C N 250 N S N 251 N C N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N C N 265 R C N 266 N C N 267 S C N 268 R C N 269 R C N 270 R C N 271 R C N 272 N C N 273 N C N 274 N C N 275 N C N 276 N N N 277 N O N 278 N O N 279 N O N 280 N O N 281 N O N 282 N O N 283 N O N 284 N O N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N N N 331 S C N 332 N C N 333 N O N 334 N C N 335 N C N 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 N C N 352 N O N 353 N O N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N S N 362 N O N 363 N O N 364 N O N 365 N O N 366 N N N 367 S C N 368 N C N 369 N O N 370 R C N 371 N O N 372 N C N 373 N O N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N N N 384 S C N 385 N C N 386 N O N 387 N C Y 388 N C Y 389 N C Y 390 N C Y 391 N N Y 392 N C Y 393 N C Y 394 N C Y 395 N C Y 396 N C N 397 N O N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N N N 411 S C N 412 N C N 413 N O N 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C Y 419 N C Y 420 N C N 421 N O N 422 N O N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N N N 435 S C N 436 N C N 437 N O N 438 N C N 439 N C N 440 N C N 441 N O N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing Y 153 N sing Y 154 N doub Y 155 N doub N 156 N sing Y 157 N sing N 158 N sing Y 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub N 309 N sing Y 310 N doub N 311 N sing Y 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N doub N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N doub N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N doub N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N doub N 373 N sing N 374 N sing N 375 N sing N 376 N sing Y 377 N doub Y 378 N sing Y 379 N sing N 380 N sing Y 381 N doub Y 382 N sing Y 383 N sing N 384 N sing Y 385 N sing Y 386 N doub N 387 N sing Y 388 N doub N 389 N sing Y 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing Y 405 N doub Y 406 N sing Y 407 N sing N 408 N sing Y 409 N doub N 410 N sing Y 411 N doub N 412 N sing Y 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N doub N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing UK Glycobiology 9999 0959-6658 19 194 200 10.1093/glycob/cwn119 18974199 Effects on sialic acid recognition of amino acid mutations in the carbohydrate-binding cleft of the rotavirus spike protein 2009 10.2210/pdb2p3k/pdb pdb_00002p3k 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 mirrors CCD 2004-07-16 MAR CCD 165 mm silicon 111 SINGLE WAVELENGTH M x-ray 1 0.9794 1.0 BM30A ESRF 0.9794 SYNCHROTRON ESRF BEAMLINE BM30A 18156.062 VP4 VP8* domain (fragment 64-224) 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 323.296 2-O-methyl-5-N-acetyl-alpha-D-neuraminic acid 1 syn non-polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 235 nat water rotavirus spike protein no no VLDGPYQPTTFNPPVDYWMLLAPTAAGVVVEGTNNTDRWLATILVEPNVTSETRSYTLFGTQEQITIANASQTQWKFIDV VKTTQNGSYSQYGPLQSTPKLYAVMKHNGKIYTYNGETPNVTTKYYSTTNYDSVNMTAFCDFYIIPREEESTCTEYINNG L VLDGPYQPTTFNPPVDYWMLLAPTAAGVVVEGTNNTDRWLATILVEPNVTSETRSYTLFGTQEQITIANASQTQWKFIDV VKTTQNGSYSQYGPLQSTPKLYAVMKHNGKIYTYNGETPNVTTKYYSTTNYDSVNMTAFCDFYIIPREEESTCTEYINNG L A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Rotavirus Rotavirus A Rhesus Escherichia Escherichia coli sample 10969 Rhesus rotavirus 469008 Escherichia coli Bl21 DE3 Plasmid pGEX-VP8*(64-224) 1 2.05 40.01 VAPOR DIFFUSION, HANGING DROP 6.5 1.7M (NH4)2SO4, 2.4% v/v PEG 400, 0.1M PIPES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 303K 303 chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 repository Initial release Carbohydrate remediation repository Remediation Non-polymer description Version format compliance Data collection Derived calculations Structure summary Data collection Database references Structure summary 1 0 2008-03-11 1 1 2011-07-13 1 2 2020-07-29 1 3 2024-03-13 _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession 2-O-methyl-5-N-acetyl-a-D-neuraminic acid Same native rhesus rotavirus VP8* protein but structure solved at 295K Rhesus rotavirus VP8* with mutation Arg101 to alanine. Solved at 295K RCSB Y PDBJ 2007-03-09 REL REL SO4 SULFATE ION MNA 2-O-methyl-5-N-acetyl-alpha-D-neuraminic acid GOL GLYCEROL HOH water SO4 3000 2 SO4 SO4 3000 A MNA 1000 3 MNA MNA 1000 A GOL 4000 4 GOL GOL 4000 A HOH 1 5 HOH HOH 4001 A HOH 2 5 HOH HOH 4002 A HOH 3 5 HOH HOH 4003 A HOH 4 5 HOH HOH 4004 A HOH 5 5 HOH HOH 4005 A HOH 6 5 HOH HOH 4006 A HOH 7 5 HOH HOH 4007 A HOH 8 5 HOH HOH 4008 A HOH 9 5 HOH HOH 4009 A HOH 10 5 HOH HOH 4010 A HOH 11 5 HOH HOH 4011 A HOH 12 5 HOH HOH 4012 A HOH 13 5 HOH HOH 4013 A HOH 14 5 HOH HOH 4014 A HOH 15 5 HOH HOH 4015 A HOH 16 5 HOH HOH 4016 A HOH 17 5 HOH HOH 4017 A HOH 18 5 HOH HOH 4018 A HOH 19 5 HOH HOH 4019 A HOH 20 5 HOH HOH 4020 A HOH 21 5 HOH HOH 4021 A HOH 22 5 HOH HOH 4022 A HOH 23 5 HOH HOH 4023 A HOH 24 5 HOH HOH 4024 A HOH 25 5 HOH HOH 4025 A HOH 26 5 HOH HOH 4026 A HOH 27 5 HOH HOH 4027 A HOH 28 5 HOH HOH 4028 A HOH 29 5 HOH HOH 4029 A HOH 30 5 HOH HOH 4030 A HOH 31 5 HOH HOH 4031 A HOH 32 5 HOH HOH 4032 A HOH 33 5 HOH HOH 4033 A HOH 34 5 HOH HOH 4034 A HOH 35 5 HOH HOH 4035 A HOH 36 5 HOH HOH 4036 A HOH 37 5 HOH HOH 4037 A HOH 38 5 HOH HOH 4038 A HOH 39 5 HOH HOH 4039 A HOH 40 5 HOH HOH 4040 A HOH 41 5 HOH HOH 4041 A HOH 42 5 HOH HOH 4042 A HOH 43 5 HOH HOH 4043 A HOH 44 5 HOH HOH 4044 A HOH 45 5 HOH HOH 4045 A HOH 46 5 HOH HOH 4046 A HOH 47 5 HOH HOH 4047 A HOH 48 5 HOH HOH 4048 A HOH 49 5 HOH HOH 4049 A HOH 50 5 HOH HOH 4050 A HOH 51 5 HOH HOH 4051 A HOH 52 5 HOH HOH 4052 A HOH 53 5 HOH HOH 4053 A HOH 54 5 HOH HOH 4054 A HOH 55 5 HOH HOH 4055 A HOH 56 5 HOH HOH 4056 A HOH 57 5 HOH HOH 4057 A HOH 58 5 HOH HOH 4058 A HOH 59 5 HOH HOH 4059 A HOH 60 5 HOH HOH 4060 A HOH 61 5 HOH HOH 4061 A HOH 62 5 HOH HOH 4062 A HOH 63 5 HOH HOH 4063 A HOH 64 5 HOH HOH 4064 A HOH 65 5 HOH HOH 4065 A HOH 66 5 HOH HOH 4066 A HOH 67 5 HOH HOH 4067 A HOH 68 5 HOH HOH 4068 A HOH 69 5 HOH HOH 4069 A HOH 70 5 HOH HOH 4070 A HOH 71 5 HOH HOH 4071 A HOH 72 5 HOH HOH 4072 A HOH 73 5 HOH HOH 4073 A HOH 74 5 HOH HOH 4074 A HOH 75 5 HOH HOH 4075 A HOH 76 5 HOH HOH 4076 A HOH 77 5 HOH HOH 4077 A HOH 78 5 HOH HOH 4078 A HOH 79 5 HOH HOH 4079 A HOH 80 5 HOH HOH 4080 A HOH 81 5 HOH HOH 4081 A HOH 82 5 HOH HOH 4082 A HOH 83 5 HOH HOH 4083 A HOH 84 5 HOH HOH 4084 A HOH 85 5 HOH HOH 4085 A HOH 86 5 HOH HOH 4086 A HOH 87 5 HOH HOH 4087 A HOH 88 5 HOH HOH 4088 A HOH 89 5 HOH HOH 4089 A HOH 90 5 HOH HOH 4090 A HOH 91 5 HOH HOH 4091 A HOH 92 5 HOH HOH 4092 A HOH 93 5 HOH HOH 4093 A HOH 94 5 HOH HOH 4094 A HOH 95 5 HOH HOH 4095 A HOH 96 5 HOH HOH 4096 A HOH 97 5 HOH HOH 4097 A HOH 98 5 HOH HOH 4098 A HOH 99 5 HOH HOH 4099 A HOH 100 5 HOH HOH 4100 A HOH 101 5 HOH HOH 4101 A HOH 102 5 HOH HOH 4102 A HOH 103 5 HOH HOH 4103 A HOH 104 5 HOH HOH 4104 A HOH 105 5 HOH HOH 4105 A HOH 106 5 HOH HOH 4106 A HOH 107 5 HOH HOH 4107 A HOH 108 5 HOH HOH 4108 A HOH 109 5 HOH HOH 4109 A HOH 110 5 HOH HOH 4110 A HOH 111 5 HOH HOH 4111 A HOH 112 5 HOH HOH 4112 A HOH 113 5 HOH HOH 4113 A HOH 114 5 HOH HOH 4114 A HOH 115 5 HOH HOH 4115 A HOH 116 5 HOH HOH 4116 A HOH 117 5 HOH HOH 4117 A HOH 118 5 HOH HOH 4118 A HOH 119 5 HOH HOH 4119 A HOH 120 5 HOH HOH 4120 A HOH 121 5 HOH HOH 4121 A HOH 122 5 HOH HOH 4122 A HOH 123 5 HOH HOH 4123 A HOH 124 5 HOH HOH 4124 A HOH 125 5 HOH HOH 4125 A HOH 126 5 HOH HOH 4126 A HOH 127 5 HOH HOH 4127 A HOH 128 5 HOH HOH 4128 A HOH 129 5 HOH HOH 4129 A HOH 130 5 HOH HOH 4130 A HOH 131 5 HOH HOH 4131 A HOH 132 5 HOH HOH 4132 A HOH 133 5 HOH HOH 4133 A HOH 134 5 HOH HOH 4134 A HOH 135 5 HOH HOH 4135 A HOH 136 5 HOH HOH 4136 A HOH 137 5 HOH HOH 4137 A HOH 138 5 HOH HOH 4138 A HOH 139 5 HOH HOH 4139 A HOH 140 5 HOH HOH 4140 A HOH 141 5 HOH HOH 4141 A HOH 142 5 HOH HOH 4142 A HOH 143 5 HOH HOH 4143 A HOH 144 5 HOH HOH 4144 A HOH 145 5 HOH HOH 4145 A HOH 146 5 HOH HOH 4146 A HOH 147 5 HOH HOH 4147 A HOH 148 5 HOH HOH 4148 A HOH 149 5 HOH HOH 4149 A HOH 150 5 HOH HOH 4150 A HOH 151 5 HOH HOH 4151 A HOH 152 5 HOH HOH 4152 A HOH 153 5 HOH HOH 4153 A HOH 154 5 HOH HOH 4154 A HOH 155 5 HOH HOH 4155 A HOH 156 5 HOH HOH 4156 A HOH 157 5 HOH HOH 4157 A HOH 158 5 HOH HOH 4158 A HOH 159 5 HOH HOH 4159 A HOH 160 5 HOH HOH 4160 A HOH 161 5 HOH HOH 4161 A HOH 162 5 HOH HOH 4162 A HOH 163 5 HOH HOH 4163 A HOH 164 5 HOH HOH 4164 A HOH 165 5 HOH HOH 4165 A HOH 166 5 HOH HOH 4166 A HOH 167 5 HOH HOH 4167 A HOH 168 5 HOH HOH 4168 A HOH 169 5 HOH HOH 4169 A HOH 170 5 HOH HOH 4170 A HOH 171 5 HOH HOH 4171 A HOH 172 5 HOH HOH 4172 A HOH 173 5 HOH HOH 4173 A HOH 174 5 HOH HOH 4174 A HOH 175 5 HOH HOH 4175 A HOH 176 5 HOH HOH 4176 A HOH 177 5 HOH HOH 4177 A HOH 178 5 HOH HOH 4178 A HOH 179 5 HOH HOH 4179 A HOH 180 5 HOH HOH 4180 A HOH 181 5 HOH HOH 4181 A HOH 182 5 HOH HOH 4182 A HOH 183 5 HOH HOH 4183 A HOH 184 5 HOH HOH 4184 A HOH 185 5 HOH HOH 4185 A HOH 186 5 HOH HOH 4186 A HOH 187 5 HOH HOH 4187 A HOH 188 5 HOH HOH 4188 A HOH 189 5 HOH HOH 4189 A HOH 190 5 HOH HOH 4190 A HOH 191 5 HOH HOH 4191 A HOH 192 5 HOH HOH 4192 A HOH 193 5 HOH HOH 4193 A HOH 194 5 HOH HOH 4194 A HOH 195 5 HOH HOH 4195 A HOH 196 5 HOH HOH 4196 A HOH 197 5 HOH HOH 4197 A HOH 198 5 HOH HOH 4198 A HOH 199 5 HOH HOH 4199 A HOH 200 5 HOH HOH 4200 A HOH 201 5 HOH HOH 4201 A HOH 202 5 HOH HOH 4202 A HOH 203 5 HOH HOH 4203 A HOH 204 5 HOH HOH 4204 A HOH 205 5 HOH HOH 4205 A HOH 206 5 HOH HOH 4206 A HOH 207 5 HOH HOH 4207 A HOH 208 5 HOH HOH 4208 A HOH 209 5 HOH HOH 4209 A HOH 210 5 HOH HOH 4210 A HOH 211 5 HOH HOH 4211 A HOH 212 5 HOH HOH 4212 A HOH 213 5 HOH HOH 4213 A HOH 214 5 HOH HOH 4214 A HOH 215 5 HOH HOH 4215 A HOH 216 5 HOH HOH 4216 A HOH 217 5 HOH HOH 4217 A HOH 218 5 HOH HOH 4218 A HOH 219 5 HOH HOH 4219 A HOH 220 5 HOH HOH 4220 A HOH 221 5 HOH HOH 4221 A HOH 222 5 HOH HOH 4222 A HOH 223 5 HOH HOH 4223 A HOH 224 5 HOH HOH 4224 A HOH 225 5 HOH HOH 4225 A HOH 226 5 HOH HOH 4226 A HOH 227 5 HOH HOH 4227 A HOH 228 5 HOH HOH 4228 A HOH 229 5 HOH HOH 4229 A HOH 230 5 HOH HOH 4230 A HOH 231 5 HOH HOH 4231 A HOH 232 5 HOH HOH 4232 A HOH 233 5 HOH HOH 4233 A HOH 234 5 HOH HOH 4234 A HOH 235 5 HOH HOH 4235 A VAL 64 n 1 VAL 64 A LEU 65 n 2 LEU 65 A ASP 66 n 3 ASP 66 A GLY 67 n 4 GLY 67 A PRO 68 n 5 PRO 68 A TYR 69 n 6 TYR 69 A GLN 70 n 7 GLN 70 A PRO 71 n 8 PRO 71 A THR 72 n 9 THR 72 A THR 73 n 10 THR 73 A PHE 74 n 11 PHE 74 A ASN 75 n 12 ASN 75 A PRO 76 n 13 PRO 76 A PRO 77 n 14 PRO 77 A VAL 78 n 15 VAL 78 A ASP 79 n 16 ASP 79 A TYR 80 n 17 TYR 80 A TRP 81 n 18 TRP 81 A MET 82 n 19 MET 82 A LEU 83 n 20 LEU 83 A LEU 84 n 21 LEU 84 A ALA 85 n 22 ALA 85 A PRO 86 n 23 PRO 86 A THR 87 n 24 THR 87 A ALA 88 n 25 ALA 88 A ALA 89 n 26 ALA 89 A GLY 90 n 27 GLY 90 A VAL 91 n 28 VAL 91 A VAL 92 n 29 VAL 92 A VAL 93 n 30 VAL 93 A GLU 94 n 31 GLU 94 A GLY 95 n 32 GLY 95 A THR 96 n 33 THR 96 A ASN 97 n 34 ASN 97 A ASN 98 n 35 ASN 98 A THR 99 n 36 THR 99 A ASP 100 n 37 ASP 100 A ARG 101 n 38 ARG 101 A TRP 102 n 39 TRP 102 A LEU 103 n 40 LEU 103 A ALA 104 n 41 ALA 104 A THR 105 n 42 THR 105 A ILE 106 n 43 ILE 106 A LEU 107 n 44 LEU 107 A VAL 108 n 45 VAL 108 A GLU 109 n 46 GLU 109 A PRO 110 n 47 PRO 110 A ASN 111 n 48 ASN 111 A VAL 112 n 49 VAL 112 A THR 113 n 50 THR 113 A SER 114 n 51 SER 114 A GLU 115 n 52 GLU 115 A THR 116 n 53 THR 116 A ARG 117 n 54 ARG 117 A SER 118 n 55 SER 118 A TYR 119 n 56 TYR 119 A THR 120 n 57 THR 120 A LEU 121 n 58 LEU 121 A PHE 122 n 59 PHE 122 A GLY 123 n 60 GLY 123 A THR 124 n 61 THR 124 A GLN 125 n 62 GLN 125 A GLU 126 n 63 GLU 126 A GLN 127 n 64 GLN 127 A ILE 128 n 65 ILE 128 A THR 129 n 66 THR 129 A ILE 130 n 67 ILE 130 A ALA 131 n 68 ALA 131 A ASN 132 n 69 ASN 132 A ALA 133 n 70 ALA 133 A SER 134 n 71 SER 134 A GLN 135 n 72 GLN 135 A THR 136 n 73 THR 136 A GLN 137 n 74 GLN 137 A TRP 138 n 75 TRP 138 A LYS 139 n 76 LYS 139 A PHE 140 n 77 PHE 140 A ILE 141 n 78 ILE 141 A ASP 142 n 79 ASP 142 A VAL 143 n 80 VAL 143 A VAL 144 n 81 VAL 144 A LYS 145 n 82 LYS 145 A THR 146 n 83 THR 146 A THR 147 n 84 THR 147 A GLN 148 n 85 GLN 148 A ASN 149 n 86 ASN 149 A GLY 150 n 87 GLY 150 A SER 151 n 88 SER 151 A TYR 152 n 89 TYR 152 A SER 153 n 90 SER 153 A GLN 154 n 91 GLN 154 A TYR 155 n 92 TYR 155 A GLY 156 n 93 GLY 156 A PRO 157 n 94 PRO 157 A LEU 158 n 95 LEU 158 A GLN 159 n 96 GLN 159 A SER 160 n 97 SER 160 A THR 161 n 98 THR 161 A PRO 162 n 99 PRO 162 A LYS 163 n 100 LYS 163 A LEU 164 n 101 LEU 164 A TYR 165 n 102 TYR 165 A ALA 166 n 103 ALA 166 A VAL 167 n 104 VAL 167 A MET 168 n 105 MET 168 A LYS 169 n 106 LYS 169 A HIS 170 n 107 HIS 170 A ASN 171 n 108 ASN 171 A GLY 172 n 109 GLY 172 A LYS 173 n 110 LYS 173 A ILE 174 n 111 ILE 174 A TYR 175 n 112 TYR 175 A THR 176 n 113 THR 176 A TYR 177 n 114 TYR 177 A ASN 178 n 115 ASN 178 A GLY 179 n 116 GLY 179 A GLU 180 n 117 GLU 180 A THR 181 n 118 THR 181 A PRO 182 n 119 PRO 182 A ASN 183 n 120 ASN 183 A VAL 184 n 121 VAL 184 A THR 185 n 122 THR 185 A THR 186 n 123 THR 186 A LYS 187 n 124 LYS 187 A TYR 188 n 125 TYR 188 A TYR 189 n 126 TYR 189 A SER 190 n 127 SER 190 A THR 191 n 128 THR 191 A THR 192 n 129 THR 192 A ASN 193 n 130 ASN 193 A TYR 194 n 131 TYR 194 A ASP 195 n 132 ASP 195 A SER 196 n 133 SER 196 A VAL 197 n 134 VAL 197 A ASN 198 n 135 ASN 198 A MET 199 n 136 MET 199 A THR 200 n 137 THR 200 A ALA 201 n 138 ALA 201 A PHE 202 n 139 PHE 202 A CYS 203 n 140 CYS 203 A ASP 204 n 141 ASP 204 A PHE 205 n 142 PHE 205 A TYR 206 n 143 TYR 206 A ILE 207 n 144 ILE 207 A ILE 208 n 145 ILE 208 A PRO 209 n 146 PRO 209 A ARG 210 n 147 ARG 210 A GLU 211 n 148 GLU 211 A GLU 212 n 149 GLU 212 A GLU 213 n 150 GLU 213 A SER 214 n 151 SER 214 A THR 215 n 152 THR 215 A CYS 216 n 153 CYS 216 A THR 217 n 154 THR 217 A GLU 218 n 155 GLU 218 A TYR 219 n 156 TYR 219 A ILE 220 n 157 ILE 220 A ASN 221 n 158 ASN 221 A ASN 222 n 159 ASN 222 A GLY 223 n 160 GLY 223 A LEU 224 n 161 LEU 224 A author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N TYR 69 A N TYR 6 A O PHE 205 A O PHE 142 A O ILE 208 A O ILE 145 A N TRP 81 A N TRP 18 A N LEU 84 A N LEU 21 A O TYR 165 A O TYR 102 A N MET 168 A N MET 105 A O TYR 175 A O TYR 112 A O GLY 179 A O GLY 116 A N GLN 159 A N GLN 96 A O SER 153 A O SER 90 A N VAL 144 A N VAL 81 A O LYS 139 A O LYS 76 A N VAL 108 A N VAL 45 A O THR 105 A O THR 42 A N VAL 92 A N VAL 29 A N GLU 94 A N GLU 31 A O THR 200 A O THR 137 A O MET 199 A O MET 136 A N PHE 74 A N PHE 11 A N TYR 69 A N TYR 6 A O PHE 205 A O PHE 142 A O ILE 208 A O ILE 145 A N TRP 81 A N TRP 18 A N LEU 84 A N LEU 21 A O TYR 165 A O TYR 102 A N MET 168 A N MET 105 A O TYR 175 A O TYR 112 A N ASN 178 A N ASN 115 A O THR 185 A O THR 122 A N VAL 112 A N VAL 49 A O ASN 132 A O ASN 69 1 A HOH 4019 E HOH 1 A A O O HOH HOH 4032 4032 1.59 1_555 7_645 1 A A O O HOH HOH 4070 4220 2.12 1_555 7_555 1 A THR 99 -130.66 -67.38 1 A ASN 111 65.18 70.48 1 A SER 114 -34.74 119.76 1 A PRO 182 -94.41 33.87 1 A THR 185 -129.77 -168.73 12.573 -0.40 0.00 0.00 -0.40 0.00 0.81 0.941 0.930 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.20009 0.17193 0.17336 1.56 20.00 1118 20572 5.2 96.03 1.250 0.047 RANDOM 1 THROUGHOUT FOURIER SYNTHESIS 0.092 0.089 0.80 0.80 1.20 MAXIMUM LIKELIHOOD MASK 1.56 20.00 235 1548 33 0 1280 0.007 0.022 1384 1.171 1.965 1906 6.436 5.000 166 31.162 25.556 63 11.400 15.000 215 5.080 15.000 3 0.079 0.200 223 0.004 0.020 1046 0.205 0.200 639 0.308 0.200 972 0.128 0.200 216 0.158 0.200 47 0.257 0.200 34 0.534 1.500 840 0.897 2.000 1366 1.480 3.000 629 2.108 4.500 537 0.24 0.198 1.595 76 1381 20 89.99 1.55 55 2P3K 21759 0.087 1 6.2 11.8 96.1 0.115 1.55 1.64 5.3 2991 1 93.4 refinement REFMAC 5.2.0005 data collection Xnemo data collection FIPBM30A data reduction MOSFLM data scaling SCALA phasing AMoRE Crystal structure of Rhesus rotavirus VP8* at 100K 1 N N 2 N N 3 N N 4 N N 5 N N A ASN 193 A ASN 130 HELX_P A VAL 197 A VAL 134 5 1 5 A GLU 212 A GLU 149 HELX_P A GLY 223 A GLY 160 1 2 12 VIRAL PROTEIN Beta-sandwich, VIRAL PROTEIN A GLY 67 A GLY 4 1 A PRO 68 A PRO 5 5.16 A THR 181 A THR 118 1 A PRO 182 A PRO 119 3.71 Q91HI9_ROTRH UNP 1 64 Q91HI9 VLDGPYQPTTFNPPVDYWMLLAPTAAGVVVEGTNNTDRWLATILVEPNVTSETRSYTLFGTQEQITIANASQTQWKFIDV VKTTQNGSYSQYGPLQSTPKLYAVMKHNGKIYTYNGETPNVTTKYYSTTNYDSVNMTAFCDFYIIPREEESTCTEYINNG L 64 224 2P3K 64 224 Q91HI9 A 1 1 161 11 6 2 anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ASP 66 A ASP 3 A TYR 69 A TYR 6 A PHE 205 A PHE 142 A PRO 209 A PRO 146 A TYR 80 A TYR 17 A LEU 84 A LEU 21 A TYR 165 A TYR 102 A HIS 170 A HIS 107 A LYS 173 A LYS 110 A GLU 180 A GLU 117 A SER 153 A SER 90 A SER 160 A SER 97 A TRP 138 A TRP 75 A LYS 145 A LYS 82 A TRP 102 A TRP 39 A VAL 108 A VAL 45 A GLY 90 A GLY 27 A THR 96 A THR 33 A ASN 198 A ASN 135 A ALA 201 A ALA 138 A THR 72 A THR 9 A PHE 74 A PHE 11 A ASP 66 A ASP 3 A TYR 69 A TYR 6 A PHE 205 A PHE 142 A PRO 209 A PRO 146 A TYR 80 A TYR 17 A LEU 84 A LEU 21 A TYR 165 A TYR 102 A HIS 170 A HIS 107 A LYS 173 A LYS 110 A GLU 180 A GLU 117 A THR 185 A THR 122 A SER 190 A SER 127 A VAL 112 A VAL 49 A LEU 121 A LEU 58 A THR 124 A THR 61 A ASN 132 A ASN 69 92 P 41 21 2