0.024840 0.000000 0.008287 0.000000 0.018371 0.000000 0.000000 0.000000 0.021938 0.00000 0.00000 0.00000 Tereshko, V. Uysal, S. Koide, A. Margalef, K. Koide, S. Kossiakoff, A.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 108.45 90.00 40.257 54.435 48.054 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Protein Sci. PRCIEI 0795 0961-8368 17 1175 1187 10.1110/ps.034892.108 18445622 Toward chaperone-assisted crystallography: protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold 2008 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 MIRRORS CCD 2004-04-01 ADSC QUANTUM 210 MAD M x-ray 1 0.97955 1.0 0.97935 1.0 17-ID APS 0.97955, 0.97935 SYNCHROTRON APS BEAMLINE 17-ID 13708.326 Ribonuclease pancreatic 3.1.27.5 1 nat polymer 13245.150 ANTIBODY CAB-RN05 1 man polymer 18.015 water 225 nat water RNase 1, RNase A no no KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV A polypeptide(L) no yes GSQVQLVESGGGLVQAGGSLRLSCAASGYAYTYIY(MSE)GWFRQAPGKEREGVAA(MSE)DSGGGGTLYADSVKGRFTI SRDKGKNTVYLQ(MSE)DSLKPEDTATYYCAAGGYELRDRTYGQWGQGTQVTVSS GSQVQLVESGGGLVQAGGSLRLSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRFTISRDKGKNT VYLQMDSLKPEDTATYYCAAGGYELRDRTYGQWGQGTQVTVSS B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Arabian camel Camelus Escherichia sample 9838 Camelus dromedarius 562 Escherichia coli cattle Bos sample 9913 Bos taurus 1 1.85 33.61 VAPOR DIFFUSION 7.0 HAMPTON RESEARCH INDEX SCREEN, SOLUTION #89: PEG 3350, SUCCINIC ACID, PH 7.0, VAPOR DIFFUSION, temperature 295K 295 repository Initial release Advisory Refinement description Version format compliance 1 0 2008-03-11 1 1 2011-07-13 SEQUENCE AT THE TIME OF PROCESSING, THE SEQUENCE OF VHH ANTIBODY IS NOT AVAILABLE AT THE UNP SEQUENCE DATABASE. RCSB Y RCSB 2007-03-11 REL REL HOH water RESIDUES -1 TO 0 IN CHAIN B ARE CLONING ARTIFACTS. HOH 101 3 HOH HOH 125 A HOH 102 3 HOH HOH 126 A HOH 103 3 HOH HOH 127 A HOH 104 3 HOH HOH 128 A HOH 105 3 HOH HOH 129 A HOH 106 3 HOH HOH 130 A HOH 108 3 HOH HOH 131 A HOH 109 3 HOH HOH 132 A HOH 110 3 HOH HOH 133 A HOH 111 3 HOH HOH 134 A HOH 112 3 HOH HOH 135 A HOH 113 3 HOH HOH 136 A HOH 114 3 HOH HOH 137 A HOH 115 3 HOH HOH 138 A HOH 116 3 HOH HOH 139 A HOH 117 3 HOH HOH 140 A HOH 118 3 HOH HOH 141 A HOH 119 3 HOH HOH 142 A HOH 120 3 HOH HOH 143 A HOH 121 3 HOH HOH 144 A HOH 122 3 HOH HOH 145 A HOH 123 3 HOH HOH 146 A HOH 124 3 HOH HOH 147 A HOH 125 3 HOH HOH 148 A HOH 126 3 HOH HOH 149 A HOH 127 3 HOH HOH 150 A HOH 128 3 HOH HOH 151 A HOH 129 3 HOH HOH 152 A HOH 130 3 HOH HOH 153 A HOH 131 3 HOH HOH 154 A HOH 132 3 HOH HOH 155 A HOH 133 3 HOH HOH 156 A HOH 134 3 HOH HOH 157 A HOH 135 3 HOH HOH 158 A HOH 136 3 HOH HOH 159 A HOH 137 3 HOH HOH 160 A HOH 138 3 HOH HOH 161 A HOH 139 3 HOH HOH 162 A HOH 140 3 HOH HOH 163 A HOH 141 3 HOH HOH 164 A HOH 142 3 HOH HOH 165 A HOH 143 3 HOH HOH 166 A HOH 144 3 HOH HOH 167 A HOH 145 3 HOH HOH 168 A HOH 146 3 HOH HOH 169 A HOH 147 3 HOH HOH 170 A HOH 148 3 HOH HOH 171 A HOH 149 3 HOH HOH 172 A HOH 150 3 HOH HOH 173 A HOH 151 3 HOH HOH 174 A HOH 152 3 HOH HOH 175 A HOH 153 3 HOH HOH 176 A HOH 154 3 HOH HOH 177 A HOH 155 3 HOH HOH 178 A HOH 156 3 HOH HOH 179 A HOH 157 3 HOH HOH 180 A HOH 158 3 HOH HOH 181 A HOH 159 3 HOH HOH 182 A HOH 160 3 HOH HOH 183 A HOH 161 3 HOH HOH 184 A HOH 162 3 HOH HOH 185 A HOH 163 3 HOH HOH 186 A HOH 164 3 HOH HOH 187 A HOH 165 3 HOH HOH 188 A HOH 166 3 HOH HOH 189 A HOH 167 3 HOH HOH 190 A HOH 168 3 HOH HOH 191 A HOH 169 3 HOH HOH 192 A HOH 170 3 HOH HOH 193 A HOH 171 3 HOH HOH 194 A HOH 172 3 HOH HOH 195 A HOH 173 3 HOH HOH 196 A HOH 174 3 HOH HOH 197 A HOH 175 3 HOH HOH 198 A HOH 176 3 HOH HOH 199 A HOH 177 3 HOH HOH 200 A HOH 178 3 HOH HOH 201 A HOH 179 3 HOH HOH 202 A HOH 180 3 HOH HOH 203 A HOH 181 3 HOH HOH 204 A HOH 182 3 HOH HOH 205 A HOH 183 3 HOH HOH 206 A HOH 184 3 HOH HOH 207 A HOH 185 3 HOH HOH 208 A HOH 186 3 HOH HOH 209 A HOH 187 3 HOH HOH 210 A HOH 188 3 HOH HOH 211 A HOH 189 3 HOH HOH 212 A HOH 190 3 HOH HOH 213 A HOH 191 3 HOH HOH 214 A HOH 192 3 HOH HOH 215 A HOH 193 3 HOH HOH 216 A HOH 194 3 HOH HOH 217 A HOH 195 3 HOH HOH 218 A HOH 196 3 HOH HOH 219 A HOH 197 3 HOH HOH 220 A HOH 198 3 HOH HOH 221 A HOH 199 3 HOH HOH 222 A HOH 200 3 HOH HOH 223 A HOH 202 3 HOH HOH 224 A HOH 203 3 HOH HOH 225 A HOH 204 3 HOH HOH 226 A HOH 205 3 HOH HOH 227 A HOH 206 3 HOH HOH 228 A HOH 207 3 HOH HOH 229 A HOH 208 3 HOH HOH 230 A HOH 209 3 HOH HOH 231 A HOH 210 3 HOH HOH 232 A HOH 211 3 HOH HOH 233 A HOH 212 3 HOH HOH 234 A HOH 213 3 HOH HOH 235 A HOH 227 3 HOH HOH 236 A HOH 303 3 HOH HOH 237 A HOH 1001 3 HOH HOH 238 A HOH 1003 3 HOH HOH 239 A HOH 1004 3 HOH HOH 240 A HOH 1013 3 HOH HOH 241 A HOH 1015 3 HOH HOH 242 A HOH 1017 3 HOH HOH 243 A HOH 1020 3 HOH HOH 244 A HOH 1022 3 HOH HOH 245 A HOH 107 3 HOH HOH 122 B HOH 201 3 HOH HOH 123 B HOH 214 3 HOH HOH 124 B HOH 215 3 HOH HOH 125 B HOH 216 3 HOH HOH 126 B HOH 217 3 HOH HOH 127 B HOH 218 3 HOH HOH 128 B HOH 219 3 HOH HOH 129 B HOH 220 3 HOH HOH 130 B HOH 221 3 HOH HOH 131 B HOH 222 3 HOH HOH 132 B HOH 223 3 HOH HOH 133 B HOH 224 3 HOH HOH 134 B HOH 225 3 HOH HOH 135 B HOH 226 3 HOH HOH 136 B HOH 228 3 HOH HOH 137 B HOH 229 3 HOH HOH 138 B HOH 230 3 HOH HOH 139 B HOH 231 3 HOH HOH 140 B HOH 232 3 HOH HOH 141 B HOH 233 3 HOH HOH 142 B HOH 234 3 HOH HOH 143 B HOH 235 3 HOH HOH 144 B HOH 236 3 HOH HOH 145 B HOH 237 3 HOH HOH 146 B HOH 238 3 HOH HOH 147 B HOH 239 3 HOH HOH 148 B HOH 240 3 HOH HOH 149 B HOH 241 3 HOH HOH 150 B HOH 242 3 HOH HOH 151 B HOH 243 3 HOH HOH 152 B HOH 244 3 HOH HOH 153 B HOH 245 3 HOH HOH 154 B HOH 246 3 HOH HOH 155 B HOH 247 3 HOH HOH 156 B HOH 248 3 HOH HOH 157 B HOH 249 3 HOH HOH 158 B HOH 250 3 HOH HOH 159 B HOH 251 3 HOH HOH 160 B HOH 252 3 HOH HOH 161 B HOH 253 3 HOH HOH 162 B HOH 254 3 HOH HOH 163 B HOH 255 3 HOH HOH 164 B HOH 256 3 HOH HOH 165 B HOH 257 3 HOH HOH 166 B HOH 258 3 HOH HOH 167 B HOH 259 3 HOH HOH 168 B HOH 260 3 HOH HOH 169 B HOH 261 3 HOH HOH 170 B HOH 262 3 HOH HOH 171 B HOH 263 3 HOH HOH 172 B HOH 264 3 HOH HOH 173 B HOH 265 3 HOH HOH 174 B HOH 266 3 HOH HOH 175 B HOH 267 3 HOH HOH 176 B HOH 268 3 HOH HOH 177 B HOH 269 3 HOH HOH 178 B HOH 270 3 HOH HOH 179 B HOH 271 3 HOH HOH 180 B HOH 272 3 HOH HOH 181 B HOH 273 3 HOH HOH 182 B HOH 274 3 HOH HOH 183 B HOH 275 3 HOH HOH 184 B HOH 276 3 HOH HOH 185 B HOH 277 3 HOH HOH 186 B HOH 278 3 HOH HOH 187 B HOH 279 3 HOH HOH 188 B HOH 280 3 HOH HOH 189 B HOH 281 3 HOH HOH 190 B HOH 282 3 HOH HOH 191 B HOH 283 3 HOH HOH 192 B HOH 284 3 HOH HOH 193 B HOH 285 3 HOH HOH 194 B HOH 286 3 HOH HOH 195 B HOH 287 3 HOH HOH 196 B HOH 288 3 HOH HOH 197 B HOH 289 3 HOH HOH 198 B HOH 290 3 HOH HOH 199 B HOH 291 3 HOH HOH 200 B HOH 292 3 HOH HOH 201 B HOH 293 3 HOH HOH 202 B HOH 294 3 HOH HOH 203 B HOH 295 3 HOH HOH 204 B HOH 296 3 HOH HOH 205 B HOH 297 3 HOH HOH 206 B HOH 298 3 HOH HOH 207 B HOH 299 3 HOH HOH 208 B HOH 300 3 HOH HOH 209 B HOH 301 3 HOH HOH 210 B HOH 302 3 HOH HOH 211 B HOH 304 3 HOH HOH 212 B HOH 305 3 HOH HOH 213 B HOH 306 3 HOH HOH 214 B HOH 307 3 HOH HOH 215 B HOH 308 3 HOH HOH 216 B HOH 309 3 HOH HOH 217 B HOH 310 3 HOH HOH 218 B HOH 311 3 HOH HOH 219 B HOH 1002 3 HOH HOH 220 B HOH 1011 3 HOH HOH 221 B HOH 1012 3 HOH HOH 222 B HOH 1014 3 HOH HOH 223 B HOH 1016 3 HOH HOH 224 B HOH 1023 3 HOH HOH 225 B LYS 1 n 1 LYS 1 A GLU 2 n 2 GLU 2 A THR 3 n 3 THR 3 A ALA 4 n 4 ALA 4 A ALA 5 n 5 ALA 5 A ALA 6 n 6 ALA 6 A LYS 7 n 7 LYS 7 A PHE 8 n 8 PHE 8 A GLU 9 n 9 GLU 9 A ARG 10 n 10 ARG 10 A GLN 11 n 11 GLN 11 A HIS 12 n 12 HIS 12 A MET 13 n 13 MET 13 A ASP 14 n 14 ASP 14 A SER 15 n 15 SER 15 A SER 16 n 16 SER 16 A THR 17 n 17 THR 17 A SER 18 n 18 SER 18 A ALA 19 n 19 ALA 19 A ALA 20 n 20 ALA 20 A SER 21 n 21 SER 21 A SER 22 n 22 SER 22 A SER 23 n 23 SER 23 A ASN 24 n 24 ASN 24 A TYR 25 n 25 TYR 25 A CYS 26 n 26 CYS 26 A ASN 27 n 27 ASN 27 A GLN 28 n 28 GLN 28 A MET 29 n 29 MET 29 A MET 30 n 30 MET 30 A LYS 31 n 31 LYS 31 A SER 32 n 32 SER 32 A ARG 33 n 33 ARG 33 A ASN 34 n 34 ASN 34 A LEU 35 n 35 LEU 35 A THR 36 n 36 THR 36 A LYS 37 n 37 LYS 37 A ASP 38 n 38 ASP 38 A ARG 39 n 39 ARG 39 A CYS 40 n 40 CYS 40 A LYS 41 n 41 LYS 41 A PRO 42 n 42 PRO 42 A VAL 43 n 43 VAL 43 A ASN 44 n 44 ASN 44 A THR 45 n 45 THR 45 A PHE 46 n 46 PHE 46 A VAL 47 n 47 VAL 47 A HIS 48 n 48 HIS 48 A GLU 49 n 49 GLU 49 A SER 50 n 50 SER 50 A LEU 51 n 51 LEU 51 A ALA 52 n 52 ALA 52 A ASP 53 n 53 ASP 53 A VAL 54 n 54 VAL 54 A GLN 55 n 55 GLN 55 A ALA 56 n 56 ALA 56 A VAL 57 n 57 VAL 57 A CYS 58 n 58 CYS 58 A SER 59 n 59 SER 59 A GLN 60 n 60 GLN 60 A LYS 61 n 61 LYS 61 A ASN 62 n 62 ASN 62 A VAL 63 n 63 VAL 63 A ALA 64 n 64 ALA 64 A CYS 65 n 65 CYS 65 A LYS 66 n 66 LYS 66 A ASN 67 n 67 ASN 67 A GLY 68 n 68 GLY 68 A GLN 69 n 69 GLN 69 A THR 70 n 70 THR 70 A ASN 71 n 71 ASN 71 A CYS 72 n 72 CYS 72 A TYR 73 n 73 TYR 73 A GLN 74 n 74 GLN 74 A SER 75 n 75 SER 75 A TYR 76 n 76 TYR 76 A SER 77 n 77 SER 77 A THR 78 n 78 THR 78 A MET 79 n 79 MET 79 A SER 80 n 80 SER 80 A ILE 81 n 81 ILE 81 A THR 82 n 82 THR 82 A ASP 83 n 83 ASP 83 A CYS 84 n 84 CYS 84 A ARG 85 n 85 ARG 85 A GLU 86 n 86 GLU 86 A THR 87 n 87 THR 87 A GLY 88 n 88 GLY 88 A SER 89 n 89 SER 89 A SER 90 n 90 SER 90 A LYS 91 n 91 LYS 91 A TYR 92 n 92 TYR 92 A PRO 93 n 93 PRO 93 A ASN 94 n 94 ASN 94 A CYS 95 n 95 CYS 95 A ALA 96 n 96 ALA 96 A TYR 97 n 97 TYR 97 A LYS 98 n 98 LYS 98 A THR 99 n 99 THR 99 A THR 100 n 100 THR 100 A GLN 101 n 101 GLN 101 A ALA 102 n 102 ALA 102 A ASN 103 n 103 ASN 103 A LYS 104 n 104 LYS 104 A HIS 105 n 105 HIS 105 A ILE 106 n 106 ILE 106 A ILE 107 n 107 ILE 107 A VAL 108 n 108 VAL 108 A ALA 109 n 109 ALA 109 A CYS 110 n 110 CYS 110 A GLU 111 n 111 GLU 111 A GLY 112 n 112 GLY 112 A ASN 113 n 113 ASN 113 A PRO 114 n 114 PRO 114 A TYR 115 n 115 TYR 115 A VAL 116 n 116 VAL 116 A PRO 117 n 117 PRO 117 A VAL 118 n 118 VAL 118 A HIS 119 n 119 HIS 119 A PHE 120 n 120 PHE 120 A ASP 121 n 121 ASP 121 A ALA 122 n 122 ALA 122 A SER 123 n 123 SER 123 A VAL 124 n 124 VAL 124 A GLY -1 n 1 GLY -1 B SER 0 n 2 SER 0 B GLN 1 n 3 GLN 1 B VAL 2 n 4 VAL 2 B GLN 3 n 5 GLN 3 B LEU 4 n 6 LEU 4 B VAL 5 n 7 VAL 5 B GLU 6 n 8 GLU 6 B SER 7 n 9 SER 7 B GLY 8 n 10 GLY 8 B GLY 9 n 11 GLY 9 B GLY 10 n 12 GLY 10 B LEU 11 n 13 LEU 11 B VAL 12 n 14 VAL 12 B GLN 13 n 15 GLN 13 B ALA 14 n 16 ALA 14 B GLY 15 n 17 GLY 15 B GLY 16 n 18 GLY 16 B SER 17 n 19 SER 17 B LEU 18 n 20 LEU 18 B ARG 19 n 21 ARG 19 B LEU 20 n 22 LEU 20 B SER 21 n 23 SER 21 B CYS 22 n 24 CYS 22 B ALA 23 n 25 ALA 23 B ALA 24 n 26 ALA 24 B SER 25 n 27 SER 25 B GLY 26 n 28 GLY 26 B TYR 27 n 29 TYR 27 B ALA 28 n 30 ALA 28 B TYR 29 n 31 TYR 29 B THR 30 n 32 THR 30 B TYR 31 n 33 TYR 31 B ILE 32 n 34 ILE 32 B TYR 33 n 35 TYR 33 B MSE 34 n 36 MSE 34 B GLY 35 n 37 GLY 35 B TRP 36 n 38 TRP 36 B PHE 37 n 39 PHE 37 B ARG 38 n 40 ARG 38 B GLN 39 n 41 GLN 39 B ALA 40 n 42 ALA 40 B PRO 41 n 43 PRO 41 B GLY 42 n 44 GLY 42 B LYS 43 n 45 LYS 43 B GLU 44 n 46 GLU 44 B ARG 45 n 47 ARG 45 B GLU 46 n 48 GLU 46 B GLY 47 n 49 GLY 47 B VAL 48 n 50 VAL 48 B ALA 49 n 51 ALA 49 B ALA 50 n 52 ALA 50 B MSE 51 n 53 MSE 51 B ASP 52 n 54 ASP 52 B SER 53 n 55 SER 53 B GLY 54 n 56 GLY 54 B GLY 55 n 57 GLY 55 B GLY 56 n 58 GLY 56 B GLY 57 n 59 GLY 57 B THR 58 n 60 THR 58 B LEU 59 n 61 LEU 59 B TYR 60 n 62 TYR 60 B ALA 61 n 63 ALA 61 B ASP 62 n 64 ASP 62 B SER 63 n 65 SER 63 B VAL 64 n 66 VAL 64 B LYS 65 n 67 LYS 65 B GLY 66 n 68 GLY 66 B ARG 67 n 69 ARG 67 B PHE 68 n 70 PHE 68 B THR 69 n 71 THR 69 B ILE 70 n 72 ILE 70 B SER 71 n 73 SER 71 B ARG 72 n 74 ARG 72 B ASP 73 n 75 ASP 73 B LYS 74 n 76 LYS 74 B GLY 75 n 77 GLY 75 B LYS 76 n 78 LYS 76 B ASN 77 n 79 ASN 77 B THR 78 n 80 THR 78 B VAL 79 n 81 VAL 79 B TYR 80 n 82 TYR 80 B LEU 81 n 83 LEU 81 B GLN 82 n 84 GLN 82 B MSE 83 n 85 MSE 83 B ASP 84 n 86 ASP 84 B SER 85 n 87 SER 85 B LEU 86 n 88 LEU 86 B LYS 87 n 89 LYS 87 B PRO 88 n 90 PRO 88 B GLU 89 n 91 GLU 89 B ASP 90 n 92 ASP 90 B THR 91 n 93 THR 91 B ALA 92 n 94 ALA 92 B THR 93 n 95 THR 93 B TYR 94 n 96 TYR 94 B TYR 95 n 97 TYR 95 B CYS 96 n 98 CYS 96 B ALA 97 n 99 ALA 97 B ALA 98 n 100 ALA 98 B GLY 99 n 101 GLY 99 B GLY 100 n 102 GLY 100 B TYR 101 n 103 TYR 101 B GLU 102 n 104 GLU 102 B LEU 103 n 105 LEU 103 B ARG 104 n 106 ARG 104 B ASP 105 n 107 ASP 105 B ARG 106 n 108 ARG 106 B THR 107 n 109 THR 107 B TYR 108 n 110 TYR 108 B GLY 109 n 111 GLY 109 B GLN 110 n 112 GLN 110 B TRP 111 n 113 TRP 111 B GLY 112 n 114 GLY 112 B GLN 113 n 115 GLN 113 B GLY 114 n 116 GLY 114 B THR 115 n 117 THR 115 B GLN 116 n 118 GLN 116 B VAL 117 n 119 VAL 117 B THR 118 n 120 THR 118 B VAL 119 n 121 VAL 119 B SER 120 n 122 SER 120 B SER 121 n 123 SER 121 B 0.6087 -0.5005 0.2287 0.6446 -0.1736 0.4150 -0.0444 -0.0384 -0.0296 0.0456 0.0448 -0.0244 0.0027 -0.0145 -0.0004 -0.0320 0.0010 0.0249 -0.0033 0.0002 -0.0441 refined 22.7108 34.0890 18.4838 X-RAY DIFFRACTION 1.1171 -0.4115 0.4222 0.7119 -0.1190 0.6280 -0.0332 0.0091 0.0014 -0.0249 0.0310 0.0470 -0.0110 0.0279 0.0022 -0.0117 -0.0050 0.0216 0.0013 0.0030 -0.0259 refined 1.8080 51.6308 0.0465 X-RAY DIFFRACTION A 1 A 124 X-RAY DIFFRACTION 1 A 125 A 235 X-RAY DIFFRACTION 1 B 122 B 123 X-RAY DIFFRACTION 1 B 0 B 121 X-RAY DIFFRACTION 2 A 236 A 237 X-RAY DIFFRACTION 2 B 124 B 219 X-RAY DIFFRACTION 2 A 238 A 245 X-RAY DIFFRACTION 2 B 220 B 225 X-RAY DIFFRACTION 2 author_and_software_defined_assembly PISA 2 dimeric 1170 -3.9 12140 B MSE 34 SELENOMETHIONINE B MSE 36 MET B MSE 51 SELENOMETHIONINE B MSE 53 MET B MSE 83 SELENOMETHIONINE B MSE 85 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N PHE 46 A N PHE 46 A O THR 82 A O THR 82 A N ASP 83 A N ASP 83 A O THR 100 A O THR 100 A O VAL 108 A O VAL 108 A N TYR 73 A N TYR 73 A O GLN 74 A O GLN 74 A N LYS 61 A N LYS 61 A N PHE 46 A N PHE 46 A O THR 82 A O THR 82 A N ASP 83 A N ASP 83 A O THR 100 A O THR 100 A N ALA 109 A N ALA 109 A O VAL 118 A O VAL 118 B N SER 7 B N SER 9 B O SER 21 B O SER 23 B N LEU 18 B N LEU 20 B O MSE 83 B O MSE 85 B O GLN 82 B O GLN 84 B N THR 69 B N THR 71 B N VAL 12 B N VAL 14 B O THR 118 B O THR 120 B O THR 115 B O THR 117 B N TYR 94 B N TYR 96 B O TYR 95 B O TYR 97 B N PHE 37 B N PHE 39 B N TRP 36 B N TRP 38 B O ALA 49 B O ALA 51 B N ALA 50 B N ALA 52 B O LEU 59 B O LEU 61 B N VAL 12 B N VAL 14 B O THR 118 B O THR 120 B O THR 115 B O THR 117 B N TYR 94 B N TYR 96 B N ALA 98 B N ALA 100 B O GLN 110 B O GLN 112 1 A ASN 34 70.35 30.14 1 A HIS 48 -100.76 60.77 1 A GLN 60 -99.90 -137.53 1 A ASN 94 -103.73 71.15 1 B TYR 29 -114.17 -167.01 1 B ALA 92 179.59 167.89 1 B GLU 102 52.00 -135.38 15.503 -0.83 0.00 -1.17 -1.03 0.00 1.11 0.966 0.945 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.20227 0.1583 0.16052 0.16052 1.65 20.00 1180 23613 5.0 99.55 4.195 0.066 RANDOM LIKELY RESIDUAL 1 THROUGHOUT 0 0 MAD 0.103 0.104 0.80 0.80 1.20 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 1.65 20.00 225 2096 0 0 1871 0.011 0.019 1920 0.001 0.020 1628 1.097 1.890 2594 0.729 2.145 3811 6.432 5.000 246 33.007 24.302 86 13.161 15.000 316 16.467 15.000 11 0.053 0.200 275 0.007 0.020 2193 0.001 0.020 392 0.198 0.200 311 0.197 0.200 1611 0.083 0.200 1090 0.144 0.200 147 0.121 0.200 12 0.224 0.200 55 0.140 0.200 20 1.329 1.500 1501 0.318 1.500 522 1.618 2.000 1950 2.701 3.000 798 3.584 4.500 644 0.233 0.175 1.695 80 1588 20 1.65 20 2P43 23613 0 0 0.063 1 3.2 99.9 refinement REFMAC 5.1.9999 data collection HKL-3000 data reduction HKL-3000 data scaling HKL-3000 phasing SOLVE Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.65A resolution: SE3-mono-1 crystal form with three se-met sites (M34, M51, M83) in vhh scaffold Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.65A resolution: SE3-mono-1 crystal form with three se-met sites (M34, M51, M83) in vhh scaffold 1 N N 2 N N 3 N N 3 N N A THR 3 A THR 3 HELX_P A MET 13 A MET 13 1 1 11 A ASN 24 A ASN 24 HELX_P A ARG 33 A ARG 33 1 2 10 A SER 50 A SER 50 HELX_P A ALA 56 A ALA 56 1 3 7 A VAL 57 A VAL 57 HELX_P A GLN 60 A GLN 60 5 4 4 B ASP 62 B ASP 64 HELX_P B LYS 65 B LYS 67 5 5 4 B LYS 87 B LYS 89 HELX_P B THR 91 B THR 93 5 6 5 B ARG 104 B ARG 106 HELX_P B TYR 108 B TYR 110 5 7 5 disulf 2.033 A CYS 26 A SG CYS 26 1_555 A CYS 84 A SG CYS 84 1_555 disulf 2.025 A CYS 40 A SG CYS 40 1_555 A CYS 95 A SG CYS 95 1_555 disulf 2.052 A CYS 58 A SG CYS 58 1_555 A CYS 110 A SG CYS 110 1_555 disulf 2.047 A CYS 65 A SG CYS 65 1_555 A CYS 72 A SG CYS 72 1_555 disulf 2.065 B CYS 22 B SG CYS 24 1_555 B CYS 96 B SG CYS 98 1_555 covale 1.329 B TYR 33 B C TYR 35 1_555 B MSE 34 B N MSE 36 1_555 covale 1.316 B MSE 34 B C MSE 36 1_555 B GLY 35 B N GLY 37 1_555 covale 1.313 B ALA 50 B C ALA 52 1_555 B MSE 51 B N MSE 53 1_555 covale 1.325 B MSE 51 B C MSE 53 1_555 B ASP 52 B N ASP 54 1_555 covale 1.328 B GLN 82 B C GLN 84 1_555 B MSE 83 B N MSE 85 1_555 covale 1.323 B MSE 83 B C MSE 85 1_555 B ASP 84 B N ASP 86 1_555 HYDROLASE/IMMUNE SYSTEM SEMET PHASING, CAMELID SINGLE-DOMAIN ANTIBODY, VHH, CAB-RN05, RNASE A, YEAST SURFACE DISPLAY, HYDROLASE, HYDROLASE-IMMUNE SYSTEM COMPLEX A TYR 92 A TYR 92 1 A PRO 93 A PRO 93 14.36 A ASN 113 A ASN 113 1 A PRO 114 A PRO 114 22.08 RNAS1_BOVIN UNP 1 27 P61823 KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV 2P43 PDB 2 2P43 27 150 2P43 1 124 P61823 A 1 1 124 -1 121 2P43 -1 121 2P43 B 2 1 123 5 4 4 6 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel A VAL 43 A VAL 43 A VAL 47 A VAL 47 A MET 79 A MET 79 A GLU 86 A GLU 86 A TYR 97 A TYR 97 A GLU 111 A GLU 111 A CYS 72 A CYS 72 A GLN 74 A GLN 74 A LYS 61 A LYS 61 A VAL 63 A VAL 63 A VAL 43 A VAL 43 A VAL 47 A VAL 47 A MET 79 A MET 79 A GLU 86 A GLU 86 A TYR 97 A TYR 97 A GLU 111 A GLU 111 A VAL 116 A VAL 116 A VAL 124 A VAL 124 B GLN 3 B GLN 5 B GLY 8 B GLY 10 B LEU 18 B LEU 20 B SER 25 B SER 27 B THR 78 B THR 80 B MSE 83 B MSE 85 B PHE 68 B PHE 70 B SER 71 B SER 73 B GLY 10 B GLY 12 B GLN 13 B GLN 15 B THR 115 B THR 117 B SER 120 B SER 122 B ALA 92 B ALA 94 B ALA 98 B ALA 100 B TYR 33 B TYR 35 B GLN 39 B GLN 41 B GLU 46 B GLU 48 B ASP 52 B ASP 54 B LEU 59 B LEU 61 B TYR 60 B TYR 62 B GLY 10 B GLY 12 B GLN 13 B GLN 15 B THR 115 B THR 117 B SER 120 B SER 122 B ALA 92 B ALA 94 B ALA 98 B ALA 100 B GLN 110 B GLN 112 B TRP 111 B TRP 113 4 P 1 21 1